Rroxscaffold_4G00292230

Glutathione transferase GST 23-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
12586327 .. 12597982
11656 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00292230.1

Sequence Viewer

Length: 507 bp
ATGAATATCAAGAAGAGGACATATTCAACAAGAGTGATTTGCTCCTTCGTACAACCCAAAGGCACAAGAAGTTCCGTGTTTGTTCATGGTGGAAAGAGGATTGCAGAATCAACTGTTATTCCGGAGTACATTGAAGAGGCCTGGCCGCGAACCCTCTCGCTTCCAATAGACCCTCGTGAGAGCGCCATGGCTCAATTTTGGACAAAGTTTGGAGATGACAAGGATTGTGGGTTAGCCACTAATCCCCGTGGTACGATAATCTTGGCTGGAGAAGAGCAAATAAAAGCAGCAAAAGAAGCCCAGGAGTGTCCGAAGATCTTAGAAGAGCATGGCCTTGAAGATAAGAAGTTCTTTGATGGTGACAAGATAGGAATGACAGACTTATCCTTAGGATGGCTAGCATTTTGTCTTGAGGCCATGGAAGGAGCAGCTGGTGTACAAGTTCTGGAAGTCAATAGCTTCCCTCACTTGCACGCATGGATTAGAAATTCAAGGAAGTTCATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

168

Amino Acids

18.86

Weight (kDa)

6.43

Isoelectric Point (pI)

38.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 148
AccIII TCCGGA 1 cut(s) 121
AciI CCGC 1 cut(s) 146
AcoI YGGCCR 1 cut(s) 143
AcsI RAATTY 1 cut(s) 487
AfaI GTAC 4 cut(s) 51, 128, 253, 438
AfiI CCNNNNNNNGG 1 cut(s) 393
AgsI TTSAA 4 cut(s) 27, 134, 338, 492
AjnI CCWGG 2 cut(s) 140, 300
AluBI AGCT 2 cut(s) 431, 459
AluI AGCT 2 cut(s) 431, 459
Aor13HI TCCGGA 1 cut(s) 121
AoxI GGCC 4 cut(s) 138, 143, 331, 414
ApeKI GCWGC 2 cut(s) 287, 428
ApoI RAATTY 1 cut(s) 487
AspLEI GCGC 1 cut(s) 185
AsuHPI GGTGA 1 cut(s) 371
AsuNHI GCTAGC 1 cut(s) 397
AxyI CCTNAGG 1 cut(s) 388
BauI CACGAG 1 cut(s) 174
BbvI GCAGC 2 cut(s) 299, 440
BccI CCATC 2 cut(s) 350, 387
BciT130I CCWGG 2 cut(s) 142, 302
BfaI CTAG 1 cut(s) 398
BfoI RGCGCY 1 cut(s) 186
BglII AGATCT 1 cut(s) 315
BisI GCNGC 3 cut(s) 146, 288, 429
BlsI GCNGC 3 cut(s) 147, 289, 430
Bme1390I CCNGG 2 cut(s) 142, 302
BmrFI CCNGG 2 cut(s) 142, 302
BmtI GCTAGC 1 cut(s) 401
BpmI CTGGAG 1 cut(s) 288
BpuEI CTTGAG 1 cut(s) 431
BsaJI CCNNGG 4 cut(s) 186, 247, 300, 417
BsaWI WCCGGW 1 cut(s) 121
Bsc4I CCNNNNNNNGG 1 cut(s) 393
Bse21I CCTNAGG 1 cut(s) 388
BseAI TCCGGA 1 cut(s) 121
BseBI CCWGG 2 cut(s) 142, 302
BseDI CCNNGG 4 cut(s) 186, 247, 300, 417
BseGI GGATG 1 cut(s) 398
BseLI CCNNNNNNNGG 1 cut(s) 393
BseXI GCAGC 2 cut(s) 299, 440
Bsh1236I CGCG 1 cut(s) 148
BshFI GGCC 4 cut(s) 140, 145, 333, 416
BsiSI CCGG 1 cut(s) 122
BslI CCNNNNNNNGG 1 cut(s) 393
BsnI GGCC 4 cut(s) 140, 145, 333, 416
Bsp13I TCCGGA 1 cut(s) 121
Bsp1407I TGTACA 1 cut(s) 436
Bsp143I GATC 1 cut(s) 315
Bsp19I CCATGG 2 cut(s) 186, 417
BspACI CCGC 1 cut(s) 146
BspANI GGCC 4 cut(s) 140, 145, 333, 416
BspEI TCCGGA 1 cut(s) 121
BspFNI CGCG 1 cut(s) 148
BspOI GCTAGC 1 cut(s) 401
BspQI GCTCTTC 2 cut(s) 267, 318
BsrGI TGTACA 1 cut(s) 436
BssECI CCNNGG 4 cut(s) 186, 247, 300, 417
BssMI GATC 1 cut(s) 315
BssSI CACGAG 1 cut(s) 174
BssT1I CCWWGG 2 cut(s) 186, 417
Bst2BI CACGAG 1 cut(s) 174
Bst2UI CCWGG 2 cut(s) 142, 302
Bst4CI ACNGT 1 cut(s) 115
Bst6I CTCTTC 4 cut(s) 8, 129, 267, 318
BstAUI TGTACA 1 cut(s) 436
BstC8I GCNNGC 2 cut(s) 399, 474
BstDEI CTNAG 2 cut(s) 319, 388
BstDSI CCRYGG 3 cut(s) 186, 247, 417
BstF5I GGATG 1 cut(s) 398
BstFNI CGCG 1 cut(s) 148
BstH2I RGCGCY 1 cut(s) 186
BstHHI GCGC 1 cut(s) 185
BstKTI GATC 1 cut(s) 318
BstMBI GATC 1 cut(s) 315
BstMWI GCNNNNNNNGC 1 cut(s) 296
BstNI CCWGG 2 cut(s) 142, 302
BstSCI CCNGG 2 cut(s) 140, 300
BstUI CGCG 1 cut(s) 148
BstV1I GCAGC 2 cut(s) 299, 440
BstX2I RGATCY 1 cut(s) 315
BstYI RGATCY 1 cut(s) 315
Bsu36I CCTNAGG 1 cut(s) 388
BsuRI GGCC 4 cut(s) 140, 145, 333, 416
BtgI CCRYGG 3 cut(s) 186, 247, 417
BtsCI GGATG 1 cut(s) 398
Cac8I GCNNGC 2 cut(s) 399, 474
CfoI GCGC 1 cut(s) 185
Csp6I GTAC 4 cut(s) 50, 127, 252, 437
CspCI CAANNNNNGTGG 2 cut(s) 208, 243
CviAII CATG 6 cut(s) 86, 187, 329, 418, 477, 502
CviQI GTAC 4 cut(s) 50, 127, 252, 437
DdeI CTNAG 2 cut(s) 319, 388
DpnI GATC 1 cut(s) 317
DpnII GATC 1 cut(s) 315
EaeI YGGCCR 1 cut(s) 143
Eam1104I CTCTTC 4 cut(s) 8, 129, 267, 318
EarI CTCTTC 4 cut(s) 8, 129, 267, 318
Eco130I CCWWGG 2 cut(s) 186, 417
Eco147I AGGCCT 1 cut(s) 140
Eco81I CCTNAGG 1 cut(s) 388
EcoRII CCWGG 2 cut(s) 140, 300
EcoT14I CCWWGG 2 cut(s) 186, 417
ErhI CCWWGG 2 cut(s) 186, 417
FaeI CATG 6 cut(s) 89, 190, 332, 421, 480, 505
FaiI YATR 7 cut(s) 22, 87, 188, 330, 419, 478, 503
FalI AAGNNNNNCTT 2 cut(s) 335, 367
FatI CATG 6 cut(s) 85, 186, 328, 417, 476, 501
Fnu4HI GCNGC 3 cut(s) 146, 288, 429
FokI GGATG 1 cut(s) 405
Fsp4HI GCNGC 3 cut(s) 146, 288, 429
FspBI CTAG 1 cut(s) 398
GlaI GCGC 1 cut(s) 184
GluI GCNGC 3 cut(s) 146, 288, 429
GsuI CTGGAG 1 cut(s) 288
HaeII RGCGCY 1 cut(s) 186
HaeIII GGCC 4 cut(s) 140, 145, 333, 416
HapII CCGG 1 cut(s) 122
HhaI GCGC 1 cut(s) 185
Hin1II CATG 6 cut(s) 89, 190, 332, 421, 480, 505
Hin6I GCGC 1 cut(s) 183
HinP1I GCGC 1 cut(s) 183
HinfI GANTC 1 cut(s) 107
HpaII CCGG 1 cut(s) 122
HphI GGTGA 1 cut(s) 371
Hpy166II GTNNAC 1 cut(s) 437
Hpy188I TCNGA 1 cut(s) 312
Hpy188III TCNNGA 5 cut(s) 10, 122, 176, 410, 446
Hpy8I GTNNAC 1 cut(s) 437
HpyAV CCTTC 2 cut(s) 55, 416
HpyCH4III ACNGT 1 cut(s) 115
HpyCH4V TGCA 2 cut(s) 104, 472
HpyF10VI GCNNNNNNNGC 1 cut(s) 296
HpyF3I CTNAG 2 cut(s) 319, 388
Hsp92II CATG 6 cut(s) 89, 190, 332, 421, 480, 505
HspAI GCGC 1 cut(s) 183
Kpn2I TCCGGA 1 cut(s) 121
Kzo9I GATC 1 cut(s) 315
LguI GCTCTTC 2 cut(s) 267, 318
LmnI GCTCC 2 cut(s) 47, 425
LpnPI CCDG 8 cut(s) 127, 135, 154, 252, 287, 314, 417, 431
Lsp1109I GCAGC 2 cut(s) 299, 440
MaeI CTAG 1 cut(s) 398
MaeIII GTNAC 1 cut(s) 359
MalI GATC 1 cut(s) 317
MboI GATC 1 cut(s) 315
MboII GAAGA 6 cut(s) 25, 146, 284, 325, 335, 350
MflI RGATCY 1 cut(s) 315
MluCI AATT 2 cut(s) 194, 487
MnlI CCTC 7 cut(s) 9, 90, 130, 164, 183, 406, 474
MroI TCCGGA 1 cut(s) 121
MspA1I CMGCKG 1 cut(s) 431
MspI CCGG 1 cut(s) 122
MspR9I CCNGG 2 cut(s) 142, 302
MvaI CCWGG 2 cut(s) 142, 302
MvnI CGCG 1 cut(s) 148
MwoI GCNNNNNNNGC 1 cut(s) 296
NcoI CCATGG 2 cut(s) 186, 417
NdeII GATC 1 cut(s) 315
NheI GCTAGC 1 cut(s) 397
NlaIII CATG 6 cut(s) 89, 190, 332, 421, 480, 505
NmuCI GTSAC 1 cut(s) 359
PceI AGGCCT 1 cut(s) 140
PciSI GCTCTTC 2 cut(s) 267, 318
PfeI GAWTC 1 cut(s) 107
PkrI GCNGC 3 cut(s) 147, 289, 430
Psp6I CCWGG 2 cut(s) 140, 300
PspGI CCWGG 2 cut(s) 140, 300
PsuI RGATCY 1 cut(s) 315
PvuII CAGCTG 1 cut(s) 431
RsaI GTAC 4 cut(s) 51, 128, 253, 438
RsaNI GTAC 4 cut(s) 50, 127, 252, 437
SapI GCTCTTC 2 cut(s) 267, 318
SatI GCNGC 3 cut(s) 146, 288, 429
Sau3AI GATC 1 cut(s) 315
ScrFI CCNGG 2 cut(s) 142, 302
SetI ASST 2 cut(s) 433, 461
SmlI CTYRAG 1 cut(s) 410
SmoI CTYRAG 1 cut(s) 410
Sse9I AATT 2 cut(s) 194, 487
SseBI AGGCCT 1 cut(s) 140
SsiI CCGC 1 cut(s) 146
SspMI CTAG 1 cut(s) 398
StuI AGGCCT 1 cut(s) 140
StyD4I CCNGG 2 cut(s) 140, 300
StyI CCWWGG 2 cut(s) 186, 417
TaaI ACNGT 1 cut(s) 115
TasI AATT 2 cut(s) 194, 487
TatI WGTACW 2 cut(s) 126, 436
TauI GCSGC 1 cut(s) 148
TfiI GAWTC 1 cut(s) 107
TseFI GTSAC 1 cut(s) 359
TseI GCWGC 2 cut(s) 287, 428
Tsp45I GTSAC 1 cut(s) 359
TspDTI ATGAA 3 cut(s) 17, 74, 490
TspGWI ACGGA 1 cut(s) 64
XapI RAATTY 1 cut(s) 487
XspI CTAG 1 cut(s) 398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.