Rroxscaffold_7G00182700

Glutathione transferase GST 23-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
21809597 .. 21818766
9170 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00182700.1

Sequence Viewer

Length: 447 bp
ATGCCGGAAAACCAATCGCGAGAGTCCGCTGTCATTCTTGAGTACATCGAAGAGACGTGGCCACATAACCCCTTGCTTCCTAAAGACCCTCGTGGACGAGCTCTAGCCCGGTTCTGGACAAAGTTCGGAGAGGACAAGCAACGAGAAGAACGGCGGGAGCAGGTGAGAGTCTTGGAAGAGCGGGGCCTCGGTGACAAGAAGTTTTTCGGTGGAGACGAGATTGGAATGGCTGATTTAGAATTTGGATGGCTAGCTTGGTGGTTGGAAGTCTTGAGTGAAGTAGCTGGGGTTAAAGCGATTGAAGTCGAAAGCTTCCCTCGCTTACATGCATGGATTCAAAGGTTCAAGGAGATTCCCACAATCAAAGAGACCCTTCACGATCGCGGTGCAATGTTGACCCATTGCAAAGATCGAAGAGCAAGATTTCTTGCTTTAGCAAAATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

148

Amino Acids

17.37

Weight (kDa)

6.45

Isoelectric Point (pI)

47.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_C PF00043 45 - 119 6.1e-09 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 46 - 114 9.7e-08 Glutathione S-transferase, C-terminal domain
DUF7962 PF25907 50 - 117 4.9e-08 Domain of unknown function (DUF7962)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 151
Acc36I ACCTGC 1 cut(s) 151
AccBSI CCGCTC 1 cut(s) 181
AccII CGCG 2 cut(s) 19, 384
AciI CCGC 4 cut(s) 27, 154, 181, 384
AcoI YGGCCR 1 cut(s) 59
AcsI RAATTY 1 cut(s) 239
AfaI GTAC 1 cut(s) 44
AfiI CCNNNNNNNGG 1 cut(s) 114
AgsI TTSAA 3 cut(s) 302, 338, 346
AjiI CACGTC 1 cut(s) 57
AluBI AGCT 4 cut(s) 101, 254, 284, 312
AluI AGCT 4 cut(s) 101, 254, 284, 312
Alw21I GWGCWC 1 cut(s) 103
Alw26I GTCTC 3 cut(s) 47, 207, 362
AoxI GGCC 2 cut(s) 59, 184
ApoI RAATTY 1 cut(s) 239
Asp700I GAANNNNTTC 1 cut(s) 203
AspS9I GGNCC 1 cut(s) 184
AsuC2I CCSGG 1 cut(s) 109
AsuHPI GGTGA 2 cut(s) 175, 203
AsuNHI GCTAGC 1 cut(s) 250
BalI TGGCCA 1 cut(s) 61
BanII GRGCYC 1 cut(s) 103
BauI CACGAG 1 cut(s) 90
Bbv12I GWGCWC 1 cut(s) 103
BccI CCATC 1 cut(s) 240
BceAI ACGGC 1 cut(s) 167
BcgI CGANNNNNNTGC 2 cut(s) 368, 402
BcnI CCSGG 1 cut(s) 109
BcoDI GTCTC 3 cut(s) 47, 207, 362
BfaI CTAG 2 cut(s) 104, 251
BfuAI ACCTGC 1 cut(s) 151
Bme1390I CCNGG 1 cut(s) 109
BmgBI CACGTC 1 cut(s) 57
BmgT120I GGNCC 1 cut(s) 184
BmiI GGNNCC 1 cut(s) 185
BmrFI CCNGG 1 cut(s) 109
BmtI GCTAGC 1 cut(s) 254
BpuEI CTTGAG 2 cut(s) 59, 292
BpuMI CCSGG 1 cut(s) 109
BsaI GGTCTC 1 cut(s) 362
BsaJI CCNNGG 1 cut(s) 187
Bsc4I CCNNNNNNNGG 1 cut(s) 114
Bse3DI GCAATG 2 cut(s) 396, 400
BseDI CCNNGG 1 cut(s) 187
BseGI GGATG 1 cut(s) 251
BseLI CCNNNNNNNGG 1 cut(s) 114
BseMI GCAATG 2 cut(s) 396, 400
BseYI CCCAGC 1 cut(s) 284
Bsh1236I CGCG 2 cut(s) 19, 384
Bsh1285I CGRYCG 1 cut(s) 382
BshFI GGCC 2 cut(s) 61, 186
BsiEI CGRYCG 1 cut(s) 382
BsiHKAI GWGCWC 1 cut(s) 103
BsiSI CCGG 2 cut(s) 5, 109
BslI CCNNNNNNNGG 1 cut(s) 114
BsmAI GTCTC 3 cut(s) 47, 207, 362
BsmBI CGTCTC 2 cut(s) 47, 207
BsnI GGCC 2 cut(s) 61, 186
Bso31I GGTCTC 1 cut(s) 362
Bsp1286I GDGCHC 1 cut(s) 103
Bsp143I GATC 2 cut(s) 379, 409
Bsp68I TCGCGA 1 cut(s) 19
BspACI CCGC 4 cut(s) 27, 154, 181, 384
BspANI GGCC 2 cut(s) 61, 186
BspFNI CGCG 2 cut(s) 19, 384
BspLI GGNNCC 1 cut(s) 185
BspMI ACCTGC 1 cut(s) 151
BspOI GCTAGC 1 cut(s) 254
BspQI GCTCTTC 2 cut(s) 171, 409
BspTNI GGTCTC 1 cut(s) 362
BsrBI CCGCTC 1 cut(s) 181
BsrDI GCAATG 2 cut(s) 396, 400
BssECI CCNNGG 1 cut(s) 187
BssMI GATC 2 cut(s) 379, 409
BssSI CACGAG 1 cut(s) 90
Bst2BI CACGAG 1 cut(s) 90
Bst6I CTCTTC 3 cut(s) 45, 171, 409
BstC8I GCNNGC 1 cut(s) 252
BstF5I GGATG 1 cut(s) 251
BstFNI CGCG 2 cut(s) 19, 384
BstKTI GATC 2 cut(s) 382, 412
BstMAI GTCTC 3 cut(s) 47, 207, 362
BstMBI GATC 2 cut(s) 379, 409
BstMCI CGRYCG 1 cut(s) 382
BstMWI GCNNNNNNNGC 1 cut(s) 318
BstNSI RCATGY 1 cut(s) 329
BstSCI CCNGG 1 cut(s) 107
BstUI CGCG 2 cut(s) 19, 384
BsuRI GGCC 2 cut(s) 61, 186
BtrI CACGTC 1 cut(s) 57
BtsCI GGATG 1 cut(s) 251
BtuMI TCGCGA 1 cut(s) 19
BveI ACCTGC 1 cut(s) 151
Cac8I GCNNGC 1 cut(s) 252
Cfr13I GGNCC 1 cut(s) 184
Csp6I GTAC 1 cut(s) 43
CviAII CATG 2 cut(s) 326, 330
CviJI RGCY 9 cut(s) 61, 101, 107, 186, 230, 250, 254, 284, 312
CviKI_1 RGCY 9 cut(s) 61, 101, 107, 186, 230, 250, 254, 284, 312
CviQI GTAC 1 cut(s) 43
DpnI GATC 2 cut(s) 381, 411
DpnII GATC 2 cut(s) 379, 409
EaeI YGGCCR 1 cut(s) 59
Eam1104I CTCTTC 3 cut(s) 45, 171, 409
EarI CTCTTC 3 cut(s) 45, 171, 409
Ecl136II GAGCTC 1 cut(s) 101
Eco24I GRGCYC 1 cut(s) 103
Eco31I GGTCTC 1 cut(s) 362
Eco53kI GAGCTC 1 cut(s) 101
EcoICRI GAGCTC 1 cut(s) 101
EcoO109I RGGNCCY 1 cut(s) 184
EcoT22I ATGCAT 1 cut(s) 331
EcoT38I GRGCYC 1 cut(s) 103
Esp3I CGTCTC 2 cut(s) 47, 207
FaeI CATG 2 cut(s) 329, 333
FaiI YATR 3 cut(s) 66, 327, 331
FalI AAGNNNNNCTT 2 cut(s) 357, 389
FatI CATG 2 cut(s) 325, 329
FauI CCCGC 2 cut(s) 147, 174
FokI GGATG 1 cut(s) 258
FriOI GRGCYC 1 cut(s) 103
FspBI CTAG 2 cut(s) 104, 251
GsaI CCCAGC 1 cut(s) 288
HaeIII GGCC 2 cut(s) 61, 186
HapII CCGG 2 cut(s) 5, 109
Hin1II CATG 2 cut(s) 329, 333
HincII GTYRAC 1 cut(s) 396
HindII GTYRAC 1 cut(s) 396
HindIII AAGCTT 1 cut(s) 310
HinfI GANTC 4 cut(s) 23, 168, 334, 352
HpaII CCGG 2 cut(s) 5, 109
HphI GGTGA 2 cut(s) 175, 203
Hpy166II GTNNAC 2 cut(s) 95, 396
Hpy188I TCNGA 1 cut(s) 128
Hpy188III TCNNGA 5 cut(s) 18, 38, 115, 271, 377
Hpy8I GTNNAC 2 cut(s) 95, 396
HpyAV CCTTC 1 cut(s) 383
HpyCH4IV ACGT 1 cut(s) 56
HpyCH4V TGCA 3 cut(s) 329, 389, 405
HpyF10VI GCNNNNNNNGC 1 cut(s) 318
HpySE526I ACGT 1 cut(s) 56
Hsp92II CATG 2 cut(s) 329, 333
Kzo9I GATC 2 cut(s) 379, 409
LguI GCTCTTC 2 cut(s) 171, 409
LmnI GCTCC 1 cut(s) 157
LpnPI CCDG 5 cut(s) 18, 100, 122, 146, 270
MaeI CTAG 2 cut(s) 104, 251
MaeII ACGT 1 cut(s) 56
MaeIII GTNAC 1 cut(s) 191
MalI GATC 2 cut(s) 381, 411
MbiI CCGCTC 1 cut(s) 181
MboI GATC 2 cut(s) 379, 409
MboII GAAGA 4 cut(s) 62, 158, 188, 426
MhlI GDGCHC 1 cut(s) 103
MlsI TGGCCA 1 cut(s) 61
MluCI AATT 1 cut(s) 239
MluNI TGGCCA 1 cut(s) 61
MlyI GAGTC 2 cut(s) 32, 177
MmeI TCCRAC 1 cut(s) 243
MnlI CCTC 4 cut(s) 99, 124, 197, 327
Mox20I TGGCCA 1 cut(s) 61
Mph1103I ATGCAT 1 cut(s) 331
MroXI GAANNNNTTC 1 cut(s) 203
MscI TGGCCA 1 cut(s) 61
MseI TTAA 2 cut(s) 291, 445
Msp20I TGGCCA 1 cut(s) 61
MspA1I CMGCKG 1 cut(s) 29
MspI CCGG 2 cut(s) 5, 109
MspR9I CCNGG 1 cut(s) 109
MvnI CGCG 2 cut(s) 19, 384
MwoI GCNNNNNNNGC 1 cut(s) 318
NciI CCSGG 1 cut(s) 109
NdeII GATC 2 cut(s) 379, 409
NheI GCTAGC 1 cut(s) 250
NlaIII CATG 2 cut(s) 329, 333
NlaIV GGNNCC 1 cut(s) 185
NmuCI GTSAC 1 cut(s) 191
NruI TCGCGA 1 cut(s) 19
NsiI ATGCAT 1 cut(s) 331
NspI RCATGY 1 cut(s) 329
PaqCI CACCTGC 1 cut(s) 151
PciSI GCTCTTC 2 cut(s) 171, 409
PcsI WCGNNNNNNNCGW 1 cut(s) 213
PdmI GAANNNNTTC 1 cut(s) 203
PfeI GAWTC 2 cut(s) 334, 352
Ple19I CGATCG 1 cut(s) 382
PleI GAGTC 2 cut(s) 31, 176
PpsI GAGTC 2 cut(s) 31, 176
Psp124BI GAGCTC 1 cut(s) 103
PspFI CCCAGC 1 cut(s) 284
PspN4I GGNNCC 1 cut(s) 185
PspPI GGNCC 1 cut(s) 184
PvuI CGATCG 1 cut(s) 382
RruI TCGCGA 1 cut(s) 19
RsaI GTAC 1 cut(s) 44
RsaNI GTAC 1 cut(s) 43
SacI GAGCTC 1 cut(s) 103
SapI GCTCTTC 2 cut(s) 171, 409
SaqAI TTAA 2 cut(s) 291, 445
Sau3AI GATC 2 cut(s) 379, 409
Sau96I GGNCC 1 cut(s) 184
SchI GAGTC 2 cut(s) 32, 177
ScrFI CCNGG 1 cut(s) 109
SduI GDGCHC 1 cut(s) 103
SetI ASST 7 cut(s) 59, 103, 165, 256, 286, 314, 344
SmlI CTYRAG 2 cut(s) 38, 271
SmoI CTYRAG 2 cut(s) 38, 271
Sse9I AATT 1 cut(s) 239
SsiI CCGC 4 cut(s) 27, 154, 181, 384
SspMI CTAG 2 cut(s) 104, 251
SstI GAGCTC 1 cut(s) 103
StyD4I CCNGG 1 cut(s) 107
TaiI ACGT 1 cut(s) 59
TaqI TCGA 3 cut(s) 48, 306, 412
TasI AATT 1 cut(s) 239
TatI WGTACW 1 cut(s) 42
TfiI GAWTC 2 cut(s) 334, 352
Tru1I TTAA 2 cut(s) 291, 445
Tru9I TTAA 2 cut(s) 291, 445
TseFI GTSAC 1 cut(s) 191
Tsp45I GTSAC 1 cut(s) 191
XapI RAATTY 1 cut(s) 239
XceI RCATGY 1 cut(s) 329
XmnI GAANNNNTTC 1 cut(s) 203
XspI CTAG 2 cut(s) 104, 251
Zsp2I ATGCAT 1 cut(s) 331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.