Rroxscaffold_5G00341360

glutathione

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
9883859 .. 9889317
5459 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00341360.1

Sequence Viewer

Length: 687 bp
ATGGAAGAAGTGAAGCTACTAGGATTTTGGCCAAGCCCCTTTGTTTATAGAGTGATATGGGCTCTCAAACTAAAGGGTGTGAAATTTGATTACATAGAAGAAGACCTTTCCAACAAGAGCGAGCTGCTACTACGGTACAACCCAGTTTTGAAAAAAGTCCCGGTGCTTATCCATGGCGGCAAAGCAATGGCCGAGTCCCTTGTCATCCTTGAATACATTGAAGAGACTTGGCCACAGAATCCCTTGCTTCCAAAAGATCCGCATGAAAAAGCCTTGGCTCGATTTTGGATTCAATTTGGTACTGATAAGTTTCGAGAAGTTTTGAAAATCTTGGAAGATCAATGCCTCGGAGACCAGAAGTTCTTCGGTGGTGAAACTATAGGTATGGTGGACATAGTATATGGAATGCTAGCTAACTGGTTTGAGTGCATGGAAGAAGTGGTGGGGGTGAAAGTTATAGAGCCCAGCATTTTGCCTCGCCTGCATGCATGGGTTAAGAACCTGAAGCAAGTATCTGTGATTAATGATAACCTTCCTCATCATGGAAAACTGCTTGCCTATTACAAAACTTCAAGAGAGAAATTGGTTTCAGCCCTGTCTGGGCTTGGCAAGCTTGAATACCTTCAGTATTTGAAATCGTACATGAAAACGCTTTATACAGGAATAGGTAAGGTGACAGAAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

228

Amino Acids

26.29

Weight (kDa)

6.98

Isoelectric Point (pI)

36.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 3 - 75 2e-18 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 8 - 80 3.9e-14 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 12 - 76 8e-15 Glutathione S-transferase, N-terminal domain
GST_C_2 PF13410 96 - 166 5.9e-07 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 177, 260
AclWI GGATC 1 cut(s) 251
AcoI YGGCCR 3 cut(s) 29, 189, 230
AcsI RAATTY 1 cut(s) 83
AcuI CTGAAG 2 cut(s) 524, 608
AfaI GTAC 3 cut(s) 137, 301, 641
AfiI CCNNNNNNNGG 2 cut(s) 542, 600
AgsI TTSAA 8 cut(s) 151, 212, 221, 293, 325, 573, 617, 634
AluBI AGCT 4 cut(s) 16, 124, 413, 613
AluI AGCT 4 cut(s) 16, 124, 413, 613
Alw26I GTCTC 2 cut(s) 218, 345
AlwI GGATC 1 cut(s) 251
AoxI GGCC 3 cut(s) 29, 189, 230
ApeKI GCWGC 1 cut(s) 124
ApoI RAATTY 1 cut(s) 83
AseI ATTAAT 1 cut(s) 522
Asp700I GAANNNNTTC 2 cut(s) 362, 621
AsuC2I CCSGG 1 cut(s) 161
AsuHPI GGTGA 3 cut(s) 383, 460, 685
AsuNHI GCTAGC 1 cut(s) 409
BalI TGGCCA 2 cut(s) 31, 232
BanII GRGCYC 2 cut(s) 64, 465
BarI GAAGNNNNNNTAC 1 cut(s) 32
BbsI GAAGAC 1 cut(s) 108
BbvI GCAGC 1 cut(s) 111
BcnI CCSGG 1 cut(s) 161
BcoDI GTCTC 2 cut(s) 218, 345
BfaI CTAG 2 cut(s) 20, 410
BfmI CTRYAG 1 cut(s) 378
BisI GCNGC 2 cut(s) 125, 178
BlsI GCNGC 2 cut(s) 126, 179
Bme1390I CCNGG 1 cut(s) 161
BmrFI CCNGG 1 cut(s) 161
BmrI ACTGGG 1 cut(s) 137
BmtI GCTAGC 1 cut(s) 413
BmuI ACTGGG 1 cut(s) 137
BpiI GAAGAC 1 cut(s) 108
BpuMI CCSGG 1 cut(s) 161
BsaI GGTCTC 1 cut(s) 345
BsaJI CCNNGG 3 cut(s) 172, 273, 346
Bsc4I CCNNNNNNNGG 2 cut(s) 542, 600
Bse1I ACTGG 2 cut(s) 143, 422
Bse3DI GCAATG 1 cut(s) 192
BseDI CCNNGG 3 cut(s) 172, 273, 346
BseGI GGATG 1 cut(s) 204
BseLI CCNNNNNNNGG 2 cut(s) 542, 600
BseMI GCAATG 1 cut(s) 192
BseNI ACTGG 2 cut(s) 143, 422
BseXI GCAGC 1 cut(s) 111
BseYI CCCAGC 1 cut(s) 464
BshFI GGCC 3 cut(s) 31, 191, 232
BsiSI CCGG 1 cut(s) 161
BslFI GGGAC 2 cut(s) 143, 181
BslI CCNNNNNNNGG 2 cut(s) 542, 600
BsmAI GTCTC 2 cut(s) 218, 345
BsmFI GGGAC 2 cut(s) 143, 181
BsmI GAATGC 1 cut(s) 411
BsnI GGCC 3 cut(s) 31, 191, 232
Bso31I GGTCTC 1 cut(s) 345
Bsp1286I GDGCHC 2 cut(s) 64, 465
Bsp143I GATC 2 cut(s) 256, 337
Bsp19I CCATGG 1 cut(s) 172
BspACI CCGC 2 cut(s) 177, 260
BspANI GGCC 3 cut(s) 31, 191, 232
BspOI GCTAGC 1 cut(s) 413
BspPI GGATC 1 cut(s) 251
BspTNI GGTCTC 1 cut(s) 345
BsrDI GCAATG 1 cut(s) 192
BsrI ACTGG 2 cut(s) 143, 422
BssECI CCNNGG 3 cut(s) 172, 273, 346
BssMI GATC 2 cut(s) 256, 337
BssT1I CCWWGG 2 cut(s) 172, 273
Bst4CI ACNGT 1 cut(s) 135
Bst6I CTCTTC 2 cut(s) 216, 675
BstC8I GCNNGC 6 cut(s) 122, 411, 482, 486, 555, 611
BstDSI CCRYGG 1 cut(s) 172
BstF5I GGATG 1 cut(s) 204
BstKTI GATC 2 cut(s) 259, 340
BstMAI GTCTC 2 cut(s) 218, 345
BstMBI GATC 2 cut(s) 256, 337
BstMWI GCNNNNNNNGC 2 cut(s) 481, 610
BstNSI RCATGY 1 cut(s) 488
BstSCI CCNGG 1 cut(s) 159
BstSFI CTRYAG 1 cut(s) 378
BstV1I GCAGC 1 cut(s) 111
BstV2I GAAGAC 1 cut(s) 108
BstX2I RGATCY 1 cut(s) 256
BstYI RGATCY 1 cut(s) 256
BsuRI GGCC 3 cut(s) 31, 191, 232
BtgI CCRYGG 1 cut(s) 172
BtsCI GGATG 1 cut(s) 204
Cac8I GCNNGC 6 cut(s) 122, 411, 482, 486, 555, 611
Csp6I GTAC 3 cut(s) 136, 300, 640
CviAII CATG 7 cut(s) 173, 263, 430, 485, 489, 542, 643
CviQI GTAC 3 cut(s) 136, 300, 640
DpnI GATC 2 cut(s) 258, 339
DpnII GATC 2 cut(s) 256, 337
EaeI YGGCCR 3 cut(s) 29, 189, 230
Eam1104I CTCTTC 2 cut(s) 216, 675
EarI CTCTTC 2 cut(s) 216, 675
Eco130I CCWWGG 2 cut(s) 172, 273
Eco24I GRGCYC 2 cut(s) 64, 465
Eco31I GGTCTC 1 cut(s) 345
Eco57I CTGAAG 2 cut(s) 524, 608
EcoT14I CCWWGG 2 cut(s) 172, 273
EcoT22I ATGCAT 1 cut(s) 490
EcoT38I GRGCYC 2 cut(s) 64, 465
ErhI CCWWGG 2 cut(s) 172, 273
FaeI CATG 7 cut(s) 176, 266, 433, 488, 492, 545, 646
FalI AAGNNNNNCTT 2 cut(s) 90, 122
FaqI GGGAC 2 cut(s) 143, 181
FatI CATG 7 cut(s) 172, 262, 429, 484, 488, 541, 642
Fnu4HI GCNGC 2 cut(s) 125, 178
FokI GGATG 1 cut(s) 191
FriOI GRGCYC 2 cut(s) 64, 465
Fsp4HI GCNGC 2 cut(s) 125, 178
FspBI CTAG 2 cut(s) 20, 410
GluI GCNGC 2 cut(s) 125, 178
GsaI CCCAGC 1 cut(s) 468
HaeIII GGCC 3 cut(s) 31, 191, 232
HapII CCGG 1 cut(s) 161
Hin1II CATG 7 cut(s) 176, 266, 433, 488, 492, 545, 646
HindIII AAGCTT 1 cut(s) 611
HinfI GANTC 3 cut(s) 194, 238, 289
HpaII CCGG 1 cut(s) 161
HphI GGTGA 3 cut(s) 383, 460, 685
Hpy166II GTNNAC 1 cut(s) 391
Hpy188I TCNGA 1 cut(s) 350
Hpy188III TCNNGA 2 cut(s) 314, 573
Hpy8I GTNNAC 1 cut(s) 391
HpyAV CCTTC 2 cut(s) 542, 632
HpyCH4III ACNGT 1 cut(s) 135
HpyCH4V TGCA 3 cut(s) 429, 484, 488
HpyF10VI GCNNNNNNNGC 2 cut(s) 481, 610
Hsp92II CATG 7 cut(s) 176, 266, 433, 488, 492, 545, 646
Kzo9I GATC 2 cut(s) 256, 337
Lsp1109I GCAGC 1 cut(s) 111
MaeI CTAG 2 cut(s) 20, 410
MaeIII GTNAC 1 cut(s) 673
MalI GATC 2 cut(s) 258, 339
MboI GATC 2 cut(s) 256, 337
MboII GAAGA 7 cut(s) 17, 110, 113, 233, 347, 355, 446
MflI RGATCY 1 cut(s) 256
MhlI GDGCHC 2 cut(s) 64, 465
MlsI TGGCCA 2 cut(s) 31, 232
MluCI AATT 3 cut(s) 83, 293, 581
MluNI TGGCCA 2 cut(s) 31, 232
MlyI GAGTC 1 cut(s) 203
MmeI TCCRAC 1 cut(s) 135
MnlI CCTC 3 cut(s) 356, 486, 546
Mox20I TGGCCA 2 cut(s) 31, 232
Mph1103I ATGCAT 1 cut(s) 490
MroXI GAANNNNTTC 2 cut(s) 362, 621
MscI TGGCCA 2 cut(s) 31, 232
MseI TTAA 2 cut(s) 495, 522
Msp20I TGGCCA 2 cut(s) 31, 232
MspI CCGG 1 cut(s) 161
MspR9I CCNGG 1 cut(s) 161
Mva1269I GAATGC 1 cut(s) 411
MwoI GCNNNNNNNGC 2 cut(s) 481, 610
NciI CCSGG 1 cut(s) 161
NcoI CCATGG 1 cut(s) 172
NdeII GATC 2 cut(s) 256, 337
NheI GCTAGC 1 cut(s) 409
NlaIII CATG 7 cut(s) 176, 266, 433, 488, 492, 545, 646
NmeAIII GCCGAG 1 cut(s) 217
NmuCI GTSAC 1 cut(s) 673
NsiI ATGCAT 1 cut(s) 490
NspI RCATGY 1 cut(s) 488
PaeI GCATGC 1 cut(s) 488
PctI GAATGC 1 cut(s) 411
PdmI GAANNNNTTC 2 cut(s) 362, 621
PfeI GAWTC 2 cut(s) 238, 289
PkrI GCNGC 2 cut(s) 126, 179
PleI GAGTC 1 cut(s) 202
PpsI GAGTC 1 cut(s) 202
PshBI ATTAAT 1 cut(s) 522
PspFI CCCAGC 1 cut(s) 464
PsuI RGATCY 1 cut(s) 256
RsaI GTAC 3 cut(s) 137, 301, 641
RsaNI GTAC 3 cut(s) 136, 300, 640
SaqAI TTAA 2 cut(s) 495, 522
SatI GCNGC 2 cut(s) 125, 178
Sau3AI GATC 2 cut(s) 256, 337
SchI GAGTC 1 cut(s) 203
ScrFI CCNGG 1 cut(s) 161
SduI GDGCHC 2 cut(s) 64, 465
SfcI CTRYAG 1 cut(s) 378
SphI GCATGC 1 cut(s) 488
Sse9I AATT 3 cut(s) 83, 293, 581
SsiI CCGC 2 cut(s) 177, 260
SspMI CTAG 2 cut(s) 20, 410
StyD4I CCNGG 1 cut(s) 159
StyI CCWWGG 2 cut(s) 172, 273
TaaI ACNGT 1 cut(s) 135
TaqI TCGA 2 cut(s) 280, 313
TasI AATT 3 cut(s) 83, 293, 581
TauI GCSGC 1 cut(s) 180
TfiI GAWTC 2 cut(s) 238, 289
Tru1I TTAA 2 cut(s) 495, 522
Tru9I TTAA 2 cut(s) 495, 522
TseFI GTSAC 1 cut(s) 673
TseI GCWGC 1 cut(s) 124
Tsp45I GTSAC 1 cut(s) 673
TspDTI ATGAA 2 cut(s) 279, 659
VspI ATTAAT 1 cut(s) 522
XapI RAATTY 1 cut(s) 83
XceI RCATGY 1 cut(s) 488
XmnI GAANNNNTTC 2 cut(s) 362, 621
XspI CTAG 2 cut(s) 20, 410
Zsp2I ATGCAT 1 cut(s) 490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.