Rw6G024860

Glutathione transferase GST 23-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
48017358 .. 48021734
4377 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G024860.1

Sequence Viewer

Length: 564 bp
ATGGCACAAGTTACATTGTTAGGAGCTTGGCCTAGTCCATTTGTTTACAGGGTCATCTGGGCACTTAAACTCAAAGGTGTAGACTATGAGTATATAGAGGAGGACGTCTTATACAAGAAGAGTGACCGTCTTCTAAAGTACAACCCAGTCCATAAGAAGGTTCCGGTTCTTGTTCATGCCGGAAAACCAATCGCAGAGTCCGCTGTCATTCTTGAGTACATCGAAGAGACATGGCCACATAACCCCTTGCTTCCTAAAGACCCTCATGGACGAGCTCTAGCCCGAATCTTGGAAGAGCAGGGCCTCAGTGATAAGAAGTTTTTCGGTGGAGACGAGATTGGAATGGCTGATTTAGAATTTGGATGGCTAGCTTGGTGGCTGGAAGTCTTGAGTGAAGTAGTTGGGGTTAAAGCAATTGAAGTCGAAAGCTTACCTCGCTTACATGCATGGATTCAAAGGTTCAAGGAGATTCCCACAATCAAAGAGACCCTTAATGATCGTAGTGCAATGTTGACCCATTGCAAAGATCGAAGAGCAAGATTTCTTGCTTTAGCAAAATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

187

Amino Acids

21.5

Weight (kDa)

7.03

Isoelectric Point (pI)

38.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 3 - 76 1.4e-19 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 12 - 77 1.5e-15 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 12 - 79 1.7e-13 Glutathione S-transferase, N-terminal domain
GST_C PF00043 91 - 158 3.3e-06 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 94 - 153 1.6e-06 Glutathione S-transferase, C-terminal domain
DUF7962 PF25907 95 - 156 1.1e-06 Domain of unknown function (DUF7962)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 108
AccI GTMKAC 1 cut(s) 81
AciI CCGC 1 cut(s) 201
AcoI YGGCCR 1 cut(s) 233
AcsI RAATTY 1 cut(s) 356
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 2 cut(s) 140, 218
AfiI CCNNNNNNNGG 2 cut(s) 157, 289
AgsI TTSAA 3 cut(s) 419, 455, 463
AluBI AGCT 4 cut(s) 26, 275, 371, 429
AluI AGCT 4 cut(s) 26, 275, 371, 429
Alw21I GWGCWC 1 cut(s) 277
Alw26I GTCTC 3 cut(s) 221, 324, 479
AoxI GGCC 3 cut(s) 29, 233, 301
ApoI RAATTY 1 cut(s) 356
Asp700I GAANNNNTTC 1 cut(s) 320
AspS9I GGNCC 1 cut(s) 301
AsuNHI GCTAGC 1 cut(s) 367
BaeGI GKGCMC 1 cut(s) 64
BalI TGGCCA 1 cut(s) 235
BanII GRGCYC 1 cut(s) 277
BbsI GAAGAC 1 cut(s) 122
Bbv12I GWGCWC 1 cut(s) 277
BccI CCATC 1 cut(s) 357
BcoDI GTCTC 3 cut(s) 221, 324, 479
BfaI CTAG 3 cut(s) 33, 278, 368
BmgT120I GGNCC 1 cut(s) 301
BmiI GGNNCC 1 cut(s) 162
BmrI ACTGGG 1 cut(s) 140
BmtI GCTAGC 1 cut(s) 371
BmuI ACTGGG 1 cut(s) 140
BpiI GAAGAC 1 cut(s) 122
BpuEI CTTGAG 2 cut(s) 233, 409
BsaHI GRCGYC 1 cut(s) 105
BsaI GGTCTC 1 cut(s) 479
BsaWI WCCGGW 1 cut(s) 163
Bsc4I CCNNNNNNNGG 2 cut(s) 157, 289
Bse1I ACTGG 1 cut(s) 146
Bse3DI GCAATG 2 cut(s) 513, 517
BseGI GGATG 1 cut(s) 368
BseLI CCNNNNNNNGG 2 cut(s) 157, 289
BseMI GCAATG 2 cut(s) 513, 517
BseMII CTCAG 1 cut(s) 319
BseNI ACTGG 1 cut(s) 146
BseRI GAGGAG 1 cut(s) 113
BseSI GKGCMC 1 cut(s) 64
BshFI GGCC 3 cut(s) 31, 235, 303
BsiHKAI GWGCWC 1 cut(s) 277
BsiSI CCGG 2 cut(s) 164, 180
BslI CCNNNNNNNGG 2 cut(s) 157, 289
BsmAI GTCTC 3 cut(s) 221, 324, 479
BsmBI CGTCTC 1 cut(s) 324
BsnI GGCC 3 cut(s) 31, 235, 303
Bso31I GGTCTC 1 cut(s) 479
Bsp1286I GDGCHC 2 cut(s) 64, 277
Bsp143I GATC 2 cut(s) 496, 526
BspACI CCGC 1 cut(s) 201
BspANI GGCC 3 cut(s) 31, 235, 303
BspCNI CTCAG 1 cut(s) 318
BspLI GGNNCC 1 cut(s) 162
BspOI GCTAGC 1 cut(s) 371
BspQI GCTCTTC 2 cut(s) 288, 526
BspTNI GGTCTC 1 cut(s) 479
BsrDI GCAATG 2 cut(s) 513, 517
BsrI ACTGG 1 cut(s) 146
BssMI GATC 2 cut(s) 496, 526
BssNI GRCGYC 1 cut(s) 105
Bst4CI ACNGT 1 cut(s) 128
Bst6I CTCTTC 4 cut(s) 113, 219, 288, 526
BstACI GRCGYC 1 cut(s) 105
BstC8I GCNNGC 1 cut(s) 369
BstDEI CTNAG 1 cut(s) 305
BstF5I GGATG 1 cut(s) 368
BstKTI GATC 2 cut(s) 499, 529
BstMAI GTCTC 3 cut(s) 221, 324, 479
BstMBI GATC 2 cut(s) 496, 526
BstMWI GCNNNNNNNGC 2 cut(s) 200, 435
BstNSI RCATGY 1 cut(s) 446
BstSLI GKGCMC 1 cut(s) 64
BstV2I GAAGAC 1 cut(s) 122
BsuRI GGCC 3 cut(s) 31, 235, 303
BtsCI GGATG 1 cut(s) 368
BtsIMutI CAGTG 1 cut(s) 313
Cac8I GCNNGC 1 cut(s) 369
Cfr13I GGNCC 1 cut(s) 301
Csp6I GTAC 2 cut(s) 139, 217
CviAII CATG 5 cut(s) 176, 231, 266, 443, 447
CviQI GTAC 2 cut(s) 139, 217
DdeI CTNAG 1 cut(s) 305
DpnI GATC 2 cut(s) 498, 528
DpnII GATC 2 cut(s) 496, 526
EaeI YGGCCR 1 cut(s) 233
Eam1104I CTCTTC 4 cut(s) 113, 219, 288, 526
EarI CTCTTC 4 cut(s) 113, 219, 288, 526
Ecl136II GAGCTC 1 cut(s) 275
Eco24I GRGCYC 1 cut(s) 277
Eco31I GGTCTC 1 cut(s) 479
Eco53kI GAGCTC 1 cut(s) 275
EcoICRI GAGCTC 1 cut(s) 275
EcoO109I RGGNCCY 1 cut(s) 301
EcoT22I ATGCAT 1 cut(s) 448
EcoT38I GRGCYC 1 cut(s) 277
Esp3I CGTCTC 1 cut(s) 324
FaeI CATG 5 cut(s) 179, 234, 269, 446, 450
FalI AAGNNNNNCTT 2 cut(s) 474, 506
FatI CATG 5 cut(s) 175, 230, 265, 442, 446
FblI GTMKAC 1 cut(s) 81
FokI GGATG 1 cut(s) 375
FriOI GRGCYC 1 cut(s) 277
FspBI CTAG 3 cut(s) 33, 278, 368
HaeIII GGCC 3 cut(s) 31, 235, 303
HapII CCGG 2 cut(s) 164, 180
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 5 cut(s) 179, 234, 269, 446, 450
HincII GTYRAC 1 cut(s) 513
HindII GTYRAC 1 cut(s) 513
HindIII AAGCTT 1 cut(s) 427
HinfI GANTC 4 cut(s) 197, 285, 451, 469
HpaII CCGG 2 cut(s) 164, 180
Hpy166II GTNNAC 3 cut(s) 46, 82, 513
Hpy188III TCNNGA 2 cut(s) 212, 388
Hpy8I GTNNAC 3 cut(s) 46, 82, 513
HpyAV CCTTC 1 cut(s) 151
HpyCH4III ACNGT 1 cut(s) 128
HpyCH4IV ACGT 1 cut(s) 105
HpyCH4V TGCA 3 cut(s) 446, 506, 522
HpyF10VI GCNNNNNNNGC 2 cut(s) 200, 435
HpyF3I CTNAG 1 cut(s) 305
HpySE526I ACGT 1 cut(s) 105
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 5 cut(s) 179, 234, 269, 446, 450
Kzo9I GATC 2 cut(s) 496, 526
LguI GCTCTTC 2 cut(s) 288, 526
LmnI GCTCC 1 cut(s) 23
LpnPI CCDG 7 cut(s) 34, 43, 159, 177, 193, 284, 365
MaeI CTAG 3 cut(s) 33, 278, 368
MaeII ACGT 1 cut(s) 105
MaeIII GTNAC 2 cut(s) 10, 122
MalI GATC 2 cut(s) 498, 528
MboI GATC 2 cut(s) 496, 526
MboII GAAGA 5 cut(s) 122, 130, 236, 305, 543
MfeI CAATTG 1 cut(s) 414
MhlI GDGCHC 2 cut(s) 64, 277
MlsI TGGCCA 1 cut(s) 235
MluCI AATT 2 cut(s) 356, 414
MluNI TGGCCA 1 cut(s) 235
MlyI GAGTC 1 cut(s) 206
MnlI CCTC 5 cut(s) 91, 94, 273, 314, 444
Mox20I TGGCCA 1 cut(s) 235
Mph1103I ATGCAT 1 cut(s) 448
MroXI GAANNNNTTC 1 cut(s) 320
MscI TGGCCA 1 cut(s) 235
MseI TTAA 4 cut(s) 66, 408, 492, 562
Msp20I TGGCCA 1 cut(s) 235
MspA1I CMGCKG 1 cut(s) 203
MspI CCGG 2 cut(s) 164, 180
MunI CAATTG 1 cut(s) 414
MwoI GCNNNNNNNGC 2 cut(s) 200, 435
NdeII GATC 2 cut(s) 496, 526
NheI GCTAGC 1 cut(s) 367
NlaIII CATG 5 cut(s) 179, 234, 269, 446, 450
NlaIV GGNNCC 1 cut(s) 162
NmuCI GTSAC 1 cut(s) 122
NsiI ATGCAT 1 cut(s) 448
NspI RCATGY 1 cut(s) 446
PciSI GCTCTTC 2 cut(s) 288, 526
PcsI WCGNNNNNNNCGW 1 cut(s) 330
PdmI GAANNNNTTC 1 cut(s) 320
PfeI GAWTC 3 cut(s) 285, 451, 469
PleI GAGTC 1 cut(s) 205
PpsI GAGTC 1 cut(s) 205
Psp124BI GAGCTC 1 cut(s) 277
PspN4I GGNNCC 1 cut(s) 162
PspPI GGNCC 1 cut(s) 301
RsaI GTAC 2 cut(s) 140, 218
RsaNI GTAC 2 cut(s) 139, 217
SacI GAGCTC 1 cut(s) 277
SapI GCTCTTC 2 cut(s) 288, 526
SaqAI TTAA 4 cut(s) 66, 408, 492, 562
Sau3AI GATC 2 cut(s) 496, 526
Sau96I GGNCC 1 cut(s) 301
SchI GAGTC 1 cut(s) 206
SduI GDGCHC 2 cut(s) 64, 277
SetI ASST 9 cut(s) 28, 79, 108, 162, 277, 373, 431, 436, 461
SmlI CTYRAG 2 cut(s) 212, 388
SmoI CTYRAG 2 cut(s) 212, 388
Sse9I AATT 2 cut(s) 356, 414
SsiI CCGC 1 cut(s) 201
SspMI CTAG 3 cut(s) 33, 278, 368
SstI GAGCTC 1 cut(s) 277
TaaI ACNGT 1 cut(s) 128
TaiI ACGT 1 cut(s) 108
TaqI TCGA 3 cut(s) 222, 423, 529
TasI AATT 2 cut(s) 356, 414
TatI WGTACW 2 cut(s) 138, 216
TfiI GAWTC 3 cut(s) 285, 451, 469
Tru1I TTAA 4 cut(s) 66, 408, 492, 562
Tru9I TTAA 4 cut(s) 66, 408, 492, 562
TscAI CASTG 1 cut(s) 313
TseFI GTSAC 1 cut(s) 122
Tsp45I GTSAC 1 cut(s) 122
TspDTI ATGAA 1 cut(s) 164
TspRI CASTG 1 cut(s) 313
XapI RAATTY 1 cut(s) 356
XceI RCATGY 1 cut(s) 446
XmiI GTMKAC 1 cut(s) 81
XmnI GAANNNNTTC 1 cut(s) 320
XspI CTAG 3 cut(s) 33, 278, 368
ZraI GACGTC 1 cut(s) 106
Zsp2I ATGCAT 1 cut(s) 448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.