RLG00000005385

glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
67246199 .. 67246968
770 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005385

Sequence Viewer

Length: 528 bp
ATGGGAGAGGTTAAGTTGCTTGGCACAACACAAAGCTTTCCCTGCGCCAGGATTCAGTGGGCTCTAAGGCTCAAGGGTACCATGCTTGTGCACCATGACAAACCCGTCGCCGAGTCGCTTGTGATGCTCGAGTACATTGACGAGACATGGAAGGAGAACCCCTTGCTTCCTCGGGACCCTTACGACCGAGCCATGGCTCGCTTTTGGGCTAAATATGTTGATGAGAAGTATGGGGGAGCTTTCACAGCCGAAGGAGAAGAGAAGGAGAAGGCTATAGAGTCTGCACTAGAACCACTAGCATACCTTGAGCACCAGATTGAAGGGAAGAAGTTTTTTGGTGGAGAACAAATAGGGTACCTTGATGTAGTAGTGAGTTGGATATCACAGTGGCTCAATGTGATGGAAGAAGTTGGAGGCATGAAGCTACTTGAAGCTGAGAGGTTCCCATTTCTCCATGAATGGGGTCAGAACTTCATCCAAGCTCCGGCAATCAAAGAATGCATTCCACCGAGAGAAAAGCTTGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

176

Amino Acids

20.16

Weight (kDa)

5.11

Isoelectric Point (pI)

26.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_C PF00043 80 - 162 2.2e-06 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 104
Acc65I GGTACC 2 cut(s) 77, 354
AccB1I GGYRCC 2 cut(s) 77, 354
AfaI GTAC 3 cut(s) 79, 134, 356
AfiI CCNNNNNNNGG 4 cut(s) 48, 193, 460, 484
AgsI TTSAA 2 cut(s) 320, 431
AjnI CCWGG 1 cut(s) 47
AluBI AGCT 6 cut(s) 36, 239, 424, 434, 482, 520
AluI AGCT 6 cut(s) 36, 239, 424, 434, 482, 520
Alw21I GWGCWC 2 cut(s) 93, 312
Alw26I GTCTC 1 cut(s) 137
Alw44I GTGCAC 1 cut(s) 89
Ama87I CYCGRG 2 cut(s) 128, 171
ApaLI GTGCAC 1 cut(s) 89
Asp700I GAANNNNTTC 1 cut(s) 501
Asp718I GGTACC 2 cut(s) 77, 354
AspLEI GCGC 1 cut(s) 47
AspS9I GGNCC 1 cut(s) 175
AvaI CYCGRG 2 cut(s) 128, 171
AvaII GGWCC 1 cut(s) 175
BaeGI GKGCMC 1 cut(s) 93
BanI GGYRCC 2 cut(s) 77, 354
BanII GRGCYC 1 cut(s) 64
Bbv12I GWGCWC 2 cut(s) 93, 312
BccI CCATC 1 cut(s) 394
BciT130I CCWGG 1 cut(s) 49
BcoDI GTCTC 1 cut(s) 137
BfaI CTAG 2 cut(s) 287, 296
BfmI CTRYAG 1 cut(s) 273
Bme1390I CCNGG 1 cut(s) 49
Bme18I GGWCC 1 cut(s) 175
BmeT110I CYCGRG 2 cut(s) 128, 171
BmgT120I GGNCC 1 cut(s) 175
BmiI GGNNCC 5 cut(s) 79, 176, 177, 356, 443
BmrFI CCNGG 1 cut(s) 49
BmsI GCATC 1 cut(s) 114
BpuEI CTTGAG 2 cut(s) 56, 326
BsaJI CCNNGG 2 cut(s) 170, 192
Bsc4I CCNNNNNNNGG 4 cut(s) 48, 193, 460, 484
BseBI CCWGG 1 cut(s) 49
BseDI CCNNGG 2 cut(s) 170, 192
BseGI GGATG 1 cut(s) 474
BseLI CCNNNNNNNGG 4 cut(s) 48, 193, 460, 484
BseMII CTCAG 1 cut(s) 426
BseSI GKGCMC 1 cut(s) 93
BsgI GTGCAG 1 cut(s) 267
Bsh1285I CGRYCG 1 cut(s) 187
BshNI GGYRCC 2 cut(s) 77, 354
BsiEI CGRYCG 1 cut(s) 187
BsiHKAI GWGCWC 2 cut(s) 93, 312
BsiHKCI CYCGRG 2 cut(s) 128, 171
BsiSI CCGG 1 cut(s) 485
BslFI GGGAC 1 cut(s) 188
BslI CCNNNNNNNGG 4 cut(s) 48, 193, 460, 484
BsmAI GTCTC 1 cut(s) 137
BsmFI GGGAC 1 cut(s) 188
BsmI GAATGC 2 cut(s) 501, 503
BsoBI CYCGRG 2 cut(s) 128, 171
Bsp1286I GDGCHC 3 cut(s) 64, 93, 312
Bsp19I CCATGG 1 cut(s) 192
BspCNI CTCAG 1 cut(s) 427
BspLI GGNNCC 5 cut(s) 79, 176, 177, 356, 443
BspT107I GGYRCC 2 cut(s) 77, 354
BssECI CCNNGG 2 cut(s) 170, 192
BssT1I CCWWGG 1 cut(s) 192
Bst2UI CCWGG 1 cut(s) 49
Bst4CI ACNGT 1 cut(s) 387
Bst6I CTCTTC 1 cut(s) 252
BstC8I GCNNGC 1 cut(s) 199
BstDEI CTNAG 2 cut(s) 65, 435
BstDSI CCRYGG 1 cut(s) 192
BstENI CCTNNNNNAGG 1 cut(s) 46
BstF5I GGATG 1 cut(s) 474
BstHHI GCGC 1 cut(s) 47
BstMAI GTCTC 1 cut(s) 137
BstMCI CGRYCG 1 cut(s) 187
BstMWI GCNNNNNNNGC 3 cut(s) 42, 124, 245
BstNI CCWGG 1 cut(s) 49
BstSCI CCNGG 1 cut(s) 47
BstSFI CTRYAG 1 cut(s) 273
BstSLI GKGCMC 1 cut(s) 93
BtgI CCRYGG 1 cut(s) 192
BtsCI GGATG 1 cut(s) 474
BtsIMutI CAGTG 2 cut(s) 62, 392
Cac8I GCNNGC 1 cut(s) 199
CfoI GCGC 1 cut(s) 47
Cfr13I GGNCC 1 cut(s) 175
Csp6I GTAC 3 cut(s) 78, 133, 355
CviAII CATG 6 cut(s) 82, 95, 147, 193, 418, 455
CviQI GTAC 3 cut(s) 78, 133, 355
DdeI CTNAG 2 cut(s) 65, 435
DrdI GACNNNNNNGTC 1 cut(s) 104
DseDI GACNNNNNNGTC 1 cut(s) 104
Eam1104I CTCTTC 1 cut(s) 252
EarI CTCTTC 1 cut(s) 252
Eco130I CCWWGG 1 cut(s) 192
Eco24I GRGCYC 1 cut(s) 64
Eco32I GATATC 1 cut(s) 381
Eco47I GGWCC 1 cut(s) 175
Eco88I CYCGRG 2 cut(s) 128, 171
EcoNI CCTNNNNNAGG 1 cut(s) 46
EcoO109I RGGNCCY 1 cut(s) 175
EcoRII CCWGG 1 cut(s) 47
EcoRV GATATC 1 cut(s) 381
EcoT14I CCWWGG 1 cut(s) 192
EcoT22I ATGCAT 1 cut(s) 503
EcoT38I GRGCYC 1 cut(s) 64
ErhI CCWWGG 1 cut(s) 192
FaeI CATG 6 cut(s) 85, 98, 150, 196, 421, 458
FaqI GGGAC 1 cut(s) 188
FatI CATG 6 cut(s) 81, 94, 146, 192, 417, 454
FokI GGATG 1 cut(s) 461
FriOI GRGCYC 1 cut(s) 64
FspBI CTAG 2 cut(s) 287, 296
GlaI GCGC 1 cut(s) 46
HapII CCGG 1 cut(s) 485
HhaI GCGC 1 cut(s) 47
Hin1II CATG 6 cut(s) 85, 98, 150, 196, 421, 458
Hin6I GCGC 1 cut(s) 45
HinP1I GCGC 1 cut(s) 45
HindIII AAGCTT 2 cut(s) 34, 518
HinfI GANTC 3 cut(s) 52, 113, 278
HpaII CCGG 1 cut(s) 485
Hpy166II GTNNAC 1 cut(s) 91
Hpy188I TCNGA 1 cut(s) 468
Hpy188III TCNNGA 1 cut(s) 173
Hpy8I GTNNAC 1 cut(s) 91
Hpy99I CGWCG 1 cut(s) 110
HpyAV CCTTC 5 cut(s) 145, 245, 256, 262, 314
HpyCH4III ACNGT 1 cut(s) 387
HpyCH4V TGCA 3 cut(s) 91, 284, 501
HpyF10VI GCNNNNNNNGC 3 cut(s) 42, 124, 245
HpyF3I CTNAG 2 cut(s) 65, 435
Hsp92II CATG 6 cut(s) 85, 98, 150, 196, 421, 458
HspAI GCGC 1 cut(s) 45
KflI GGGWCCC 1 cut(s) 175
KpnI GGTACC 2 cut(s) 81, 358
LmnI GCTCC 2 cut(s) 236, 487
LpnPI CCDG 5 cut(s) 34, 55, 61, 326, 498
LweI GCATC 1 cut(s) 114
MaeI CTAG 2 cut(s) 287, 296
MboII GAAGA 3 cut(s) 269, 337, 416
MhlI GDGCHC 3 cut(s) 64, 93, 312
MlyI GAGTC 2 cut(s) 122, 287
MmeI TCCRAC 2 cut(s) 356, 391
MnlI CCTC 3 cut(s) 180, 407, 432
Mph1103I ATGCAT 1 cut(s) 503
MroXI GAANNNNTTC 1 cut(s) 501
MseI TTAA 1 cut(s) 12
MslI CAYNNNNRTG 1 cut(s) 86
MspI CCGG 1 cut(s) 485
MspR9I CCNGG 1 cut(s) 49
Mva1269I GAATGC 2 cut(s) 501, 503
MvaI CCWGG 1 cut(s) 49
MwoI GCNNNNNNNGC 3 cut(s) 42, 124, 245
NcoI CCATGG 1 cut(s) 192
NlaIII CATG 6 cut(s) 85, 98, 150, 196, 421, 458
NlaIV GGNNCC 5 cut(s) 79, 176, 177, 356, 443
NmeAIII GCCGAG 1 cut(s) 136
NsiI ATGCAT 1 cut(s) 503
PaeR7I CTCGAG 1 cut(s) 128
PctI GAATGC 2 cut(s) 501, 503
PdmI GAANNNNTTC 1 cut(s) 501
PfeI GAWTC 1 cut(s) 52
PleI GAGTC 2 cut(s) 121, 286
PpsI GAGTC 2 cut(s) 121, 286
PpuMI RGGWCCY 1 cut(s) 175
Psp5II RGGWCCY 1 cut(s) 175
Psp6I CCWGG 1 cut(s) 47
PspGI CCWGG 1 cut(s) 47
PspN4I GGNNCC 5 cut(s) 79, 176, 177, 356, 443
PspPI GGNCC 1 cut(s) 175
PspPPI RGGWCCY 1 cut(s) 175
PspXI VCTCGAGB 1 cut(s) 128
RsaI GTAC 3 cut(s) 79, 134, 356
RsaNI GTAC 3 cut(s) 78, 133, 355
RseI CAYNNNNRTG 1 cut(s) 86
SaqAI TTAA 1 cut(s) 12
Sau96I GGNCC 1 cut(s) 175
SchI GAGTC 2 cut(s) 122, 287
ScrFI CCNGG 1 cut(s) 49
SduI GDGCHC 3 cut(s) 64, 93, 312
SfaNI GCATC 1 cut(s) 114
SfcI CTRYAG 1 cut(s) 273
Sfr274I CTCGAG 1 cut(s) 128
SinI GGWCC 1 cut(s) 175
SlaI CTCGAG 1 cut(s) 128
SmiMI CAYNNNNRTG 1 cut(s) 86
SmlI CTYRAG 3 cut(s) 71, 128, 305
SmoI CTYRAG 3 cut(s) 71, 128, 305
SspMI CTAG 2 cut(s) 287, 296
StyD4I CCNGG 1 cut(s) 47
StyI CCWWGG 1 cut(s) 192
TaaI ACNGT 1 cut(s) 387
TaqI TCGA 1 cut(s) 129
TaqII GACCGA 1 cut(s) 201
TatI WGTACW 1 cut(s) 132
TfiI GAWTC 1 cut(s) 52
Tru1I TTAA 1 cut(s) 12
Tru9I TTAA 1 cut(s) 12
TscAI CASTG 2 cut(s) 62, 392
TspDTI ATGAA 3 cut(s) 434, 463, 471
TspRI CASTG 2 cut(s) 62, 392
VneI GTGCAC 1 cut(s) 89
VpaK11BI GGWCC 1 cut(s) 175
XagI CCTNNNNNAGG 1 cut(s) 46
XhoI CTCGAG 1 cut(s) 128
XmnI GAANNNNTTC 1 cut(s) 501
XspI CTAG 2 cut(s) 287, 296
Zsp2I ATGCAT 1 cut(s) 503
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.