Rh6CG291300

Glutathione transferase GST 23-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
46863422 .. 46863784
363 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG291300.1

Sequence Viewer

Length: 363 bp
ATGAAGAACTTTCAAGGATTCTTCTTCAAAAGAGCTGGAGAAGAGCAAATAAAAGCAGCAAAAGAAGCCCAGGAGTATCTGAAGATCTTAGAAGACCATGGCCCTGAGGAGAAGAAGTTCTTTGATGGTGACAACATTGGAATGACAGACGTATCCATGGGATGGCTAGCATTCTGGCTTGAGGCCATGGAAGAAGCATCTGGTGTACAAGTTCTCGAAGCCAATAGCTTCCCTCGCTTGCACGCATGGATTAGAAATTTCAAGCAGGTTCCTGTGATTAAAGAAAATCATCCTGACCACACTCGGCTGGTAGCCTATTTCAAACCGCTAAGGGAGAAGTTTACCAAGCCAGCGACTACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

120

Amino Acids

13.98

Weight (kDa)

6.43

Isoelectric Point (pI)

31.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_C_2 PF13410 19 - 85 9.6e-08 Glutathione S-transferase, C-terminal domain
DUF7962 PF25907 40 - 90 6.3e-07 Domain of unknown function (DUF7962)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 256
AccB7I CCANNNNNTGG 1 cut(s) 162
AciI CCGC 1 cut(s) 326
AcsI RAATTY 1 cut(s) 256
AcuI CTGAAG 1 cut(s) 101
AfaI GTAC 1 cut(s) 207
AfiI CCNNNNNNNGG 1 cut(s) 162
AgsI TTSAA 4 cut(s) 14, 28, 262, 322
AjnI CCWGG 1 cut(s) 69
AloI GAACNNNNNNTCC 2 cut(s) 101, 133
AluBI AGCT 2 cut(s) 35, 228
AluI AGCT 2 cut(s) 35, 228
AoxI GGCC 2 cut(s) 100, 183
ApeKI GCWGC 1 cut(s) 56
ApoI RAATTY 1 cut(s) 256
Asp700I GAANNNNTTC 1 cut(s) 116
AspS9I GGNCC 1 cut(s) 101
AsuHPI GGTGA 1 cut(s) 140
AsuNHI GCTAGC 1 cut(s) 166
AxyI CCTNAGG 1 cut(s) 105
BaeI ACNNNNGTAYC 2 cut(s) 135, 168
BbsI GAAGAC 1 cut(s) 99
BbvI GCAGC 1 cut(s) 68
BccI CCATC 2 cut(s) 119, 156
BciT130I CCWGG 1 cut(s) 71
BciVI GTATCC 1 cut(s) 163
BfaI CTAG 1 cut(s) 167
BfuAI ACCTGC 1 cut(s) 256
BfuI GTATCC 1 cut(s) 163
BglII AGATCT 1 cut(s) 84
BisI GCNGC 1 cut(s) 57
BlsI GCNGC 1 cut(s) 58
Bme1390I CCNGG 1 cut(s) 71
BmgT120I GGNCC 1 cut(s) 101
BmiI GGNNCC 1 cut(s) 270
BmrFI CCNGG 1 cut(s) 71
BmsI GCATC 1 cut(s) 206
BmtI GCTAGC 1 cut(s) 170
BpiI GAAGAC 1 cut(s) 99
BpmI CTGGAG 1 cut(s) 57
Bpu10I CCTNAGC 1 cut(s) 329
BpuEI CTTGAG 1 cut(s) 200
BsaAI YACGTR 1 cut(s) 360
BsaJI CCNNGG 4 cut(s) 69, 97, 156, 186
BsaXI ACNNNNNCTCC 2 cut(s) 101, 131
Bsc4I CCNNNNNNNGG 1 cut(s) 162
Bse21I CCTNAGG 1 cut(s) 105
BseBI CCWGG 1 cut(s) 71
BseDI CCNNGG 4 cut(s) 69, 97, 156, 186
BseGI GGATG 2 cut(s) 167, 289
BseLI CCNNNNNNNGG 1 cut(s) 162
BseMII CTCAG 1 cut(s) 96
BseRI GAGGAG 1 cut(s) 122
BseXI GCAGC 1 cut(s) 68
BshFI GGCC 2 cut(s) 102, 185
BslI CCNNNNNNNGG 1 cut(s) 162
BsmI GAATGC 1 cut(s) 170
BsnI GGCC 2 cut(s) 102, 185
Bsp1407I TGTACA 1 cut(s) 205
Bsp143I GATC 1 cut(s) 84
Bsp19I CCATGG 3 cut(s) 97, 156, 186
BspACI CCGC 1 cut(s) 326
BspANI GGCC 2 cut(s) 102, 185
BspCNI CTCAG 1 cut(s) 97
BspLI GGNNCC 1 cut(s) 270
BspMI ACCTGC 1 cut(s) 256
BspOI GCTAGC 1 cut(s) 170
BspQI GCTCTTC 1 cut(s) 36
BsrGI TGTACA 1 cut(s) 205
BssECI CCNNGG 4 cut(s) 69, 97, 156, 186
BssMI GATC 1 cut(s) 84
BssT1I CCWWGG 3 cut(s) 97, 156, 186
Bst2UI CCWGG 1 cut(s) 71
Bst6I CTCTTC 1 cut(s) 36
BstAUI TGTACA 1 cut(s) 205
BstBAI YACGTR 1 cut(s) 360
BstC8I GCNNGC 4 cut(s) 168, 239, 243, 351
BstDEI CTNAG 3 cut(s) 88, 105, 329
BstDSI CCRYGG 3 cut(s) 97, 156, 186
BstF5I GGATG 2 cut(s) 167, 289
BstKTI GATC 1 cut(s) 87
BstMBI GATC 1 cut(s) 84
BstMWI GCNNNNNNNGC 2 cut(s) 65, 234
BstNI CCWGG 1 cut(s) 71
BstSCI CCNGG 1 cut(s) 69
BstV1I GCAGC 1 cut(s) 68
BstV2I GAAGAC 1 cut(s) 99
BstX2I RGATCY 1 cut(s) 84
BstYI RGATCY 1 cut(s) 84
Bsu36I CCTNAGG 1 cut(s) 105
BsuI GTATCC 1 cut(s) 163
BsuRI GGCC 2 cut(s) 102, 185
BtgI CCRYGG 3 cut(s) 97, 156, 186
BtsCI GGATG 2 cut(s) 167, 289
BveI ACCTGC 1 cut(s) 256
Cac8I GCNNGC 4 cut(s) 168, 239, 243, 351
Cfr13I GGNCC 1 cut(s) 101
Csp6I GTAC 1 cut(s) 206
CviAII CATG 4 cut(s) 98, 157, 187, 246
CviQI GTAC 1 cut(s) 206
DdeI CTNAG 3 cut(s) 88, 105, 329
DpnI GATC 1 cut(s) 86
DpnII GATC 1 cut(s) 84
Eam1104I CTCTTC 1 cut(s) 36
EarI CTCTTC 1 cut(s) 36
Eco130I CCWWGG 3 cut(s) 97, 156, 186
Eco57I CTGAAG 1 cut(s) 101
Eco81I CCTNAGG 1 cut(s) 105
EcoRII CCWGG 1 cut(s) 69
EcoT14I CCWWGG 3 cut(s) 97, 156, 186
ErhI CCWWGG 3 cut(s) 97, 156, 186
FaeI CATG 4 cut(s) 101, 160, 190, 249
FaiI YATR 4 cut(s) 99, 158, 188, 247
FalI AAGNNNNNCTT 2 cut(s) 104, 136
FatI CATG 4 cut(s) 97, 156, 186, 245
Fnu4HI GCNGC 1 cut(s) 57
FokI GGATG 2 cut(s) 174, 276
Fsp4HI GCNGC 1 cut(s) 57
FspBI CTAG 1 cut(s) 167
GluI GCNGC 1 cut(s) 57
GsuI CTGGAG 1 cut(s) 57
HaeIII GGCC 2 cut(s) 102, 185
Hin1II CATG 4 cut(s) 101, 160, 190, 249
HinfI GANTC 1 cut(s) 18
HphI GGTGA 1 cut(s) 140
Hpy166II GTNNAC 2 cut(s) 206, 342
Hpy188I TCNGA 1 cut(s) 81
Hpy188III TCNNGA 2 cut(s) 215, 293
Hpy8I GTNNAC 2 cut(s) 206, 342
HpyCH4IV ACGT 2 cut(s) 150, 359
HpyCH4V TGCA 1 cut(s) 241
HpyF10VI GCNNNNNNNGC 2 cut(s) 65, 234
HpyF3I CTNAG 3 cut(s) 88, 105, 329
HpySE526I ACGT 2 cut(s) 150, 359
Hsp92II CATG 4 cut(s) 101, 160, 190, 249
Kzo9I GATC 1 cut(s) 84
LguI GCTCTTC 1 cut(s) 36
Lsp1109I GCAGC 1 cut(s) 68
LweI GCATC 1 cut(s) 206
MaeI CTAG 1 cut(s) 167
MaeII ACGT 2 cut(s) 150, 359
MaeIII GTNAC 1 cut(s) 128
MalI GATC 1 cut(s) 86
MboI GATC 1 cut(s) 84
MboII GAAGA 8 cut(s) 13, 16, 16, 53, 94, 104, 124, 203
MflI RGATCY 1 cut(s) 84
MluCI AATT 1 cut(s) 256
MnlI CCTC 3 cut(s) 100, 175, 243
MroXI GAANNNNTTC 1 cut(s) 116
MseI TTAA 1 cut(s) 279
MslI CAYNNNNRTG 1 cut(s) 140
MspR9I CCNGG 1 cut(s) 71
Mva1269I GAATGC 1 cut(s) 170
MvaI CCWGG 1 cut(s) 71
MwoI GCNNNNNNNGC 2 cut(s) 65, 234
NcoI CCATGG 3 cut(s) 97, 156, 186
NdeII GATC 1 cut(s) 84
NheI GCTAGC 1 cut(s) 166
NlaIII CATG 4 cut(s) 101, 160, 190, 249
NlaIV GGNNCC 1 cut(s) 270
NmeAIII GCCGAG 1 cut(s) 283
NmuCI GTSAC 1 cut(s) 128
PciSI GCTCTTC 1 cut(s) 36
PctI GAATGC 1 cut(s) 170
PdmI GAANNNNTTC 1 cut(s) 116
PfeI GAWTC 1 cut(s) 18
PflMI CCANNNNNTGG 1 cut(s) 162
PkrI GCNGC 1 cut(s) 58
Ppu21I YACGTR 1 cut(s) 360
Psp6I CCWGG 1 cut(s) 69
PspGI CCWGG 1 cut(s) 69
PspN4I GGNNCC 1 cut(s) 270
PspPI GGNCC 1 cut(s) 101
PsuI RGATCY 1 cut(s) 84
RsaI GTAC 1 cut(s) 207
RsaNI GTAC 1 cut(s) 206
RseI CAYNNNNRTG 1 cut(s) 140
SapI GCTCTTC 1 cut(s) 36
SaqAI TTAA 1 cut(s) 279
SatI GCNGC 1 cut(s) 57
Sau3AI GATC 1 cut(s) 84
Sau96I GGNCC 1 cut(s) 101
ScrFI CCNGG 1 cut(s) 71
SetI ASST 5 cut(s) 37, 153, 230, 270, 362
SfaNI GCATC 1 cut(s) 206
SmiMI CAYNNNNRTG 1 cut(s) 140
SmlI CTYRAG 1 cut(s) 179
SmoI CTYRAG 1 cut(s) 179
Sse9I AATT 1 cut(s) 256
SsiI CCGC 1 cut(s) 326
SspMI CTAG 1 cut(s) 167
StyD4I CCNGG 1 cut(s) 69
StyI CCWWGG 3 cut(s) 97, 156, 186
TaiI ACGT 2 cut(s) 153, 362
TaqI TCGA 1 cut(s) 216
TasI AATT 1 cut(s) 256
TatI WGTACW 1 cut(s) 205
TfiI GAWTC 1 cut(s) 18
Tru1I TTAA 1 cut(s) 279
Tru9I TTAA 1 cut(s) 279
TseFI GTSAC 1 cut(s) 128
TseI GCWGC 1 cut(s) 56
Tsp45I GTSAC 1 cut(s) 128
TspDTI ATGAA 1 cut(s) 17
Van91I CCANNNNNTGG 1 cut(s) 162
XapI RAATTY 1 cut(s) 256
XmnI GAANNNNTTC 1 cut(s) 116
XspI CTAG 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.