RchiOBHm_Chr7g0179091

glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
1498499 .. 1499657
1159 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ15961

Sequence Viewer

Length: 642 bp
ATGGGAGGGGTGAAGCTGGTTGCTACAACTCAAAGCTTTTTCTGCACTAGGGTTCAGTGGGCTCTGAAGCTCAAAGGCGTGGAGTATGAGATAATAGAAGAAGATTTAAGAAACAAGAGCCCCATCCTGCTCAAGTATAACCCAGTCTACAAGAAGGTCCCGGTGCTTGTGCACGATGACACACCCATTGCTGAGTCACTTGTGATCCTTGAGTACATCGATGAGACATGGAAGGAGAACCCCTTACTTCCTCAGGACCCTTGTGACAGAGCCGCAGCTCGCTTTTGGGCTAAGTTTGCTGATGAGAAGGTTGTGTTTGGAGTATGGACAGCTTGCACGACGGAAGGAGAAGGGAAGGAGAAGGCAATAGAGGCTGCTCTAGAATCACTAGCTCATCTTGAGAAGCAGATTGAAGGGAAGAAGTTTTTTGGTGGAGAACAAATAGGGTATCTGGATTTAGTACTGGGTTGGATACCTCATTGGCTCAATACTATGGAAGAAGTTGGAGGCATGAAGCTACTTGAAGCCGAGAAGTTCCCATGTCTCCTTGAATGGGGTCAAAACTCAAAACTTCATCCATACTCCACTAATCAAAGAATGCATTCCACCCAGAGAGAAGCTTATCGAATACTTGACCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

213

Amino Acids

24.44

Weight (kDa)

5.49

Isoelectric Point (pI)

36.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 4 - 75 2.8e-19 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 8 - 79 3.5e-15 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 12 - 76 2.1e-16 Glutathione S-transferase, N-terminal domain
GST_C_2 PF13410 120 - 185 2.9e-06 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 147
AciI CCGC 2 cut(s) 273, 637
AclWI GGATC 1 cut(s) 199
AcuI CTGAAG 1 cut(s) 86
AfaI GTAC 2 cut(s) 215, 462
AfiI CCNNNNNNNGG 1 cut(s) 553
AgsI TTSAA 3 cut(s) 413, 524, 551
AluBI AGCT 8 cut(s) 16, 36, 70, 278, 332, 392, 517, 620
AluI AGCT 8 cut(s) 16, 36, 70, 278, 332, 392, 517, 620
Alw21I GWGCWC 1 cut(s) 174
Alw26I GTCTC 2 cut(s) 218, 548
Alw44I GTGCAC 1 cut(s) 170
AlwI GGATC 1 cut(s) 199
ApaLI GTGCAC 1 cut(s) 170
ApeKI GCWGC 2 cut(s) 275, 374
Asp700I GAANNNNTTC 1 cut(s) 601
AspS9I GGNCC 2 cut(s) 157, 256
AsuC2I CCSGG 1 cut(s) 161
AsuHPI GGTGA 1 cut(s) 22
AvaII GGWCC 2 cut(s) 157, 256
AxyI CCTNAGG 1 cut(s) 252
BaeGI GKGCMC 1 cut(s) 174
BanII GRGCYC 2 cut(s) 64, 122
Bbv12I GWGCWC 1 cut(s) 174
BbvI GCAGC 2 cut(s) 287, 361
BccI CCATC 1 cut(s) 131
BciVI GTATCC 1 cut(s) 465
BcnI CCSGG 1 cut(s) 161
BcoDI GTCTC 2 cut(s) 218, 548
BfaI CTAG 4 cut(s) 48, 380, 389, 640
BfuI GTATCC 1 cut(s) 465
BisI GCNGC 3 cut(s) 273, 276, 375
BlsI GCNGC 3 cut(s) 274, 277, 376
BmcAI AGTACT 1 cut(s) 462
Bme1390I CCNGG 1 cut(s) 161
Bme18I GGWCC 2 cut(s) 157, 256
BmgT120I GGNCC 2 cut(s) 157, 256
BmiI GGNNCC 2 cut(s) 159, 258
BmrFI CCNGG 1 cut(s) 161
BmrI ACTGGG 2 cut(s) 137, 473
BmuI ACTGGG 2 cut(s) 137, 473
BpuEI CTTGAG 3 cut(s) 116, 230, 419
BpuMI CCSGG 1 cut(s) 161
Bsa29I ATCGAT 1 cut(s) 219
Bsc4I CCNNNNNNNGG 1 cut(s) 553
Bse1I ACTGG 2 cut(s) 143, 468
Bse21I CCTNAGG 1 cut(s) 252
Bse3DI GCAATG 1 cut(s) 186
BseCI ATCGAT 1 cut(s) 219
BseGI GGATG 2 cut(s) 123, 574
BseLI CCNNNNNNNGG 1 cut(s) 553
BseMI GCAATG 1 cut(s) 186
BseMII CTCAG 2 cut(s) 183, 266
BseNI ACTGG 2 cut(s) 143, 468
BseSI GKGCMC 1 cut(s) 174
BseXI GCAGC 2 cut(s) 287, 361
BsgI GTGCAG 1 cut(s) 28
BshVI ATCGAT 1 cut(s) 219
BsiHKAI GWGCWC 1 cut(s) 174
BsiSI CCGG 1 cut(s) 161
BslFI GGGAC 1 cut(s) 143
BslI CCNNNNNNNGG 1 cut(s) 553
BsmAI GTCTC 2 cut(s) 218, 548
BsmFI GGGAC 1 cut(s) 143
BsmI GAATGC 2 cut(s) 601, 603
Bsp1286I GDGCHC 3 cut(s) 64, 122, 174
Bsp143I GATC 1 cut(s) 204
BspACI CCGC 2 cut(s) 273, 637
BspCNI CTCAG 2 cut(s) 184, 265
BspDI ATCGAT 1 cut(s) 219
BspLI GGNNCC 2 cut(s) 159, 258
BspPI GGATC 1 cut(s) 199
BsrDI GCAATG 1 cut(s) 186
BsrI ACTGG 2 cut(s) 143, 468
BssMI GATC 1 cut(s) 204
BstC8I GCNNGC 2 cut(s) 280, 334
BstDEI CTNAG 3 cut(s) 192, 252, 291
BstF5I GGATG 2 cut(s) 123, 574
BstKTI GATC 1 cut(s) 207
BstMAI GTCTC 2 cut(s) 218, 548
BstMBI GATC 1 cut(s) 204
BstMWI GCNNNNNNNGC 3 cut(s) 42, 296, 371
BstSCI CCNGG 1 cut(s) 159
BstSLI GKGCMC 1 cut(s) 174
BstV1I GCAGC 2 cut(s) 287, 361
Bsu15I ATCGAT 1 cut(s) 219
Bsu36I CCTNAGG 1 cut(s) 252
BsuI GTATCC 1 cut(s) 465
BsuTUI ATCGAT 1 cut(s) 219
BtsCI GGATG 2 cut(s) 123, 574
BtsIMutI CAGTG 1 cut(s) 62
Cac8I GCNNGC 2 cut(s) 280, 334
Cfr13I GGNCC 2 cut(s) 157, 256
ClaI ATCGAT 1 cut(s) 219
Csp6I GTAC 2 cut(s) 214, 461
CviAII CATG 3 cut(s) 228, 511, 540
CviQI GTAC 2 cut(s) 214, 461
DdeI CTNAG 3 cut(s) 192, 252, 291
DpnI GATC 1 cut(s) 206
DpnII GATC 1 cut(s) 204
Eco24I GRGCYC 2 cut(s) 64, 122
Eco47I GGWCC 2 cut(s) 157, 256
Eco57I CTGAAG 1 cut(s) 86
Eco81I CCTNAGG 1 cut(s) 252
EcoO109I RGGNCCY 2 cut(s) 157, 256
EcoT22I ATGCAT 1 cut(s) 603
EcoT38I GRGCYC 2 cut(s) 64, 122
FaeI CATG 3 cut(s) 231, 514, 543
FaiI YATR 8 cut(s) 87, 138, 229, 325, 494, 512, 541, 580
FaqI GGGAC 1 cut(s) 143
FatI CATG 3 cut(s) 227, 510, 539
FblI GTMKAC 1 cut(s) 147
Fnu4HI GCNGC 3 cut(s) 273, 276, 375
FokI GGATG 2 cut(s) 110, 561
FriOI GRGCYC 2 cut(s) 64, 122
Fsp4HI GCNGC 3 cut(s) 273, 276, 375
FspBI CTAG 4 cut(s) 48, 380, 389, 640
GluI GCNGC 3 cut(s) 273, 276, 375
HapII CCGG 1 cut(s) 161
Hin1II CATG 3 cut(s) 231, 514, 543
HindIII AAGCTT 2 cut(s) 34, 618
HinfI GANTC 2 cut(s) 194, 383
HpaII CCGG 1 cut(s) 161
HphI GGTGA 1 cut(s) 22
Hpy166II GTNNAC 2 cut(s) 148, 172
Hpy188I TCNGA 1 cut(s) 66
Hpy188III TCNNGA 4 cut(s) 254, 380, 398, 452
Hpy8I GTNNAC 2 cut(s) 148, 172
Hpy99I CGWCG 1 cut(s) 343
HpyAV CCTTC 8 cut(s) 148, 226, 301, 338, 344, 349, 355, 407
HpyCH4V TGCA 4 cut(s) 45, 172, 336, 601
HpyF10VI GCNNNNNNNGC 3 cut(s) 42, 296, 371
HpyF3I CTNAG 3 cut(s) 192, 252, 291
Hsp92II CATG 3 cut(s) 231, 514, 543
Kzo9I GATC 1 cut(s) 204
LpnPI CCDG 8 cut(s) 2, 140, 156, 174, 239, 437, 449, 623
Lsp1109I GCAGC 2 cut(s) 287, 361
MaeI CTAG 4 cut(s) 48, 380, 389, 640
MaeIII GTNAC 2 cut(s) 195, 263
MalI GATC 1 cut(s) 206
MboI GATC 1 cut(s) 204
MboII GAAGA 4 cut(s) 110, 113, 430, 509
MhlI GDGCHC 3 cut(s) 64, 122, 174
MlyI GAGTC 1 cut(s) 203
MmeI TCCRAC 2 cut(s) 449, 484
MnlI CCTC 4 cut(s) 261, 364, 486, 500
Mph1103I ATGCAT 1 cut(s) 603
MroXI GAANNNNTTC 1 cut(s) 601
MseI TTAA 1 cut(s) 107
MspI CCGG 1 cut(s) 161
MspR9I CCNGG 1 cut(s) 161
Mva1269I GAATGC 2 cut(s) 601, 603
MwoI GCNNNNNNNGC 3 cut(s) 42, 296, 371
NciI CCSGG 1 cut(s) 161
NdeII GATC 1 cut(s) 204
NlaIII CATG 3 cut(s) 231, 514, 543
NlaIV GGNNCC 2 cut(s) 159, 258
NmeAIII GCCGAG 1 cut(s) 553
NmuCI GTSAC 2 cut(s) 195, 263
NsiI ATGCAT 1 cut(s) 603
PctI GAATGC 2 cut(s) 601, 603
PdmI GAANNNNTTC 1 cut(s) 601
PfeI GAWTC 1 cut(s) 383
PkrI GCNGC 3 cut(s) 274, 277, 376
PleI GAGTC 1 cut(s) 202
PpsI GAGTC 1 cut(s) 202
PpuMI RGGWCCY 2 cut(s) 157, 256
Psp5II RGGWCCY 2 cut(s) 157, 256
PspN4I GGNNCC 2 cut(s) 159, 258
PspPI GGNCC 2 cut(s) 157, 256
PspPPI RGGWCCY 2 cut(s) 157, 256
RsaI GTAC 2 cut(s) 215, 462
RsaNI GTAC 2 cut(s) 214, 461
SaqAI TTAA 1 cut(s) 107
SatI GCNGC 3 cut(s) 273, 276, 375
Sau3AI GATC 1 cut(s) 204
Sau96I GGNCC 2 cut(s) 157, 256
ScaI AGTACT 1 cut(s) 462
SchI GAGTC 1 cut(s) 203
ScrFI CCNGG 1 cut(s) 161
SduI GDGCHC 3 cut(s) 64, 122, 174
SinI GGWCC 2 cut(s) 157, 256
SmlI CTYRAG 3 cut(s) 131, 209, 398
SmoI CTYRAG 3 cut(s) 131, 209, 398
SsiI CCGC 2 cut(s) 273, 637
SspMI CTAG 4 cut(s) 48, 380, 389, 640
StyD4I CCNGG 1 cut(s) 159
TaqI TCGA 2 cut(s) 219, 625
TatI WGTACW 2 cut(s) 213, 460
TauI GCSGC 1 cut(s) 275
TfiI GAWTC 1 cut(s) 383
Tru1I TTAA 1 cut(s) 107
Tru9I TTAA 1 cut(s) 107
TscAI CASTG 1 cut(s) 62
TseFI GTSAC 2 cut(s) 195, 263
TseI GCWGC 2 cut(s) 275, 374
Tsp45I GTSAC 2 cut(s) 195, 263
TspDTI ATGAA 2 cut(s) 527, 563
TspGWI ACGGA 1 cut(s) 356
TspRI CASTG 1 cut(s) 62
VneI GTGCAC 1 cut(s) 170
VpaK11BI GGWCC 2 cut(s) 157, 256
XbaI TCTAGA 1 cut(s) 379
XmiI GTMKAC 1 cut(s) 147
XmnI GAANNNNTTC 1 cut(s) 601
XspI CTAG 4 cut(s) 48, 380, 389, 640
ZrmI AGTACT 1 cut(s) 462
Zsp2I ATGCAT 1 cut(s) 603
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.