Rroxscaffold_5G00341170

glutathione

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000081
Physical Location & Seq
Reverse (-)
9676072 .. 9686215
10144 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00341170.1

Sequence Viewer

Length: 1035 bp
ATGGAAGAAGTGAAACTACTGGGGTTTTGGCCAAGCCCTTTTGTTTACAGAGTGATATGGGCTCTAAAACTGAAAGGCGTCGAGTATGATTATATAGAAGAAGACGTCCTTTCCAACAAGAGTGAATTGCTGTTGCAGTACAACCCAGTATTCAAGAAGGTCCCGGTTCTTGTTCATCGTGGCAAACCGATTGTTGAGTCATGTGTTATCCTTGAATACATTGAAGAAACTTGGCCTGAGAATCCATTGCTCCCGGAAGATGCTCATGATAAAGCCGTGGCTCGGTTTTGGATGCAGTTTGCGTCTCCCGATCGGATGTACTGGGAAACGCTGAGGACATTGGAAGAGCAAGGCCTTGGAGACAAGAAGTTTTTCGGGGGAGACAGCATAGGATTGGTAGACATCGTACATGGATGGCTAGCTTCCTGGTTTGAAATCATCCAAGAAATAGTAGGGGTGAAATTGCTCGAGCCAAACACTTTGCCTCGATTGCATGCATGGGTTCAGAACTTTAAGAACGCTCCTGTTATCAAAGACAACCTTCCTGACTATAACGAGTTGTTGGCTCATATGACACGGTCTCCATTGGACGACCGCCGCCACCGGAAAACCGGATCCCGCCATCGCAATCGGCACCAGCCCTCGCCACTACCACCGACTCCAACCTCACCACCGCACCGCAAGCCCGGCCTTGCGCCTCAACCCAAGTCGAAGCCGGACCGAACCACGTTGAAACCGCCCAAAGCAACCCGATTCCGGACGTCGCAGCCACCGTCCGGCCCCTCCACCACGCCGCCGATCATGGAGATCCGGGAGCACCTCCTCTCAGCCTCGACGGGAACCTATCTCGATTCCTTTTCTGGGGTCATGTACTTTGAGCAAGGCGTATGTGATTTTCCCCTCTTAGAGGTCTTGGTCACAGACCACTGGTGCCCTTGTTTCAGGTTTCGAATCAAGCTGATGAGGTTGGCTGGAGGACATAGGGCATTTCGCGGTGGCAGCCACTTTGTTGTTAGTGGAGCTCCGACAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
GST_C GST_C_2 GST_N GST_N_3

Protein Analysis

344

Amino Acids

39.37

Weight (kDa)

8.76

Isoelectric Point (pI)

44.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 3 - 75 4.3e-19 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 8 - 81 1.3e-11 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 12 - 77 4.3e-14 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 108, 764
AccB1I GGYRCC 2 cut(s) 633, 930
AccI GTMKAC 1 cut(s) 399
AccII CGCG 1 cut(s) 993
AccIII TCCGGA 1 cut(s) 756
AciI CCGC 8 cut(s) 595, 598, 619, 674, 679, 737, 794, 993
AclWI GGATC 3 cut(s) 609, 622, 802
AcoI YGGCCR 1 cut(s) 29
AcyI GRCGYC 3 cut(s) 78, 105, 761
AfaI GTAC 4 cut(s) 140, 320, 408, 872
AfiI CCNNNNNNNGG 5 cut(s) 282, 756, 776, 861, 907
AgsI TTSAA 5 cut(s) 154, 215, 224, 434, 733
AjnI CCWGG 1 cut(s) 425
AluBI AGCT 3 cut(s) 422, 958, 1022
AluI AGCT 3 cut(s) 422, 958, 1022
Alw21I GWGCWC 2 cut(s) 819, 1024
Alw26I GTCTC 4 cut(s) 309, 354, 375, 585
AlwI GGATC 3 cut(s) 609, 622, 802
Ama87I CYCGRG 1 cut(s) 467
Aor13HI TCCGGA 1 cut(s) 756
AoxI GGCC 5 cut(s) 29, 233, 352, 688, 778
ApeKI GCWGC 2 cut(s) 766, 999
Asp700I GAANNNNTTC 1 cut(s) 371
AspLEI GCGC 1 cut(s) 697
AspS9I GGNCC 3 cut(s) 160, 718, 779
AsuC2I CCSGG 4 cut(s) 164, 254, 687, 812
AsuHPI GGTGA 2 cut(s) 469, 660
AsuII TTCGAA 1 cut(s) 949
AsuNHI GCTAGC 1 cut(s) 418
AvaI CYCGRG 1 cut(s) 467
AvaII GGWCC 2 cut(s) 160, 718
BaeGI GKGCMC 1 cut(s) 935
BalI TGGCCA 1 cut(s) 31
BamHI GGATCC 1 cut(s) 614
BanI GGYRCC 2 cut(s) 633, 930
BanII GRGCYC 2 cut(s) 64, 1024
BarI GAAGNNNNNNTAC 1 cut(s) 32
BbsI GAAGAC 1 cut(s) 108
Bbv12I GWGCWC 2 cut(s) 819, 1024
BbvCI CCTCAGC 1 cut(s) 332
BbvI GCAGC 2 cut(s) 778, 1011
BccI CCATC 2 cut(s) 408, 630
BceAI ACGGC 1 cut(s) 260
BciT130I CCWGG 1 cut(s) 427
BcnI CCSGG 4 cut(s) 164, 254, 687, 812
BcoDI GTCTC 4 cut(s) 309, 354, 375, 585
BfaI CTAG 1 cut(s) 419
BisI GCNGC 4 cut(s) 598, 767, 794, 1000
BlsI GCNGC 4 cut(s) 599, 768, 795, 1001
Bme1390I CCNGG 5 cut(s) 164, 254, 427, 687, 812
Bme18I GGWCC 2 cut(s) 160, 718
BmeT110I CYCGRG 1 cut(s) 467
BmgT120I GGNCC 3 cut(s) 160, 718, 779
BmiI GGNNCC 6 cut(s) 162, 616, 635, 781, 841, 932
BmrFI CCNGG 5 cut(s) 164, 254, 427, 687, 812
BmrI ACTGGG 3 cut(s) 29, 140, 331
BmsI GCATC 2 cut(s) 250, 282
BmtI GCTAGC 1 cut(s) 422
BmuI ACTGGG 3 cut(s) 29, 140, 331
BpiI GAAGAC 1 cut(s) 108
BpmI CTGGAG 1 cut(s) 993
Bpu10I CCTNAGC 1 cut(s) 332
Bpu14I TTCGAA 1 cut(s) 949
BpuMI CCSGG 4 cut(s) 164, 254, 687, 812
BsaHI GRCGYC 3 cut(s) 78, 105, 761
BsaI GGTCTC 1 cut(s) 585
BsaJI CCNNGG 2 cut(s) 276, 355
BsaWI WCCGGW 3 cut(s) 603, 611, 756
BsaXI ACNNNNNCTCC 2 cut(s) 565, 595
Bsc4I CCNNNNNNNGG 5 cut(s) 282, 756, 776, 861, 907
Bse1I ACTGG 4 cut(s) 24, 146, 326, 932
Bse3DI GCAATG 1 cut(s) 245
BseAI TCCGGA 1 cut(s) 756
BseBI CCWGG 1 cut(s) 427
BseDI CCNNGG 2 cut(s) 276, 355
BseGI GGATG 4 cut(s) 297, 321, 419, 438
BseLI CCNNNNNNNGG 5 cut(s) 282, 756, 776, 861, 907
BseMI GCAATG 1 cut(s) 245
BseMII CTCAG 3 cut(s) 228, 323, 840
BseNI ACTGG 4 cut(s) 24, 146, 326, 932
BseRI GAGGAG 1 cut(s) 812
BseSI GKGCMC 1 cut(s) 935
BseXI GCAGC 2 cut(s) 778, 1011
Bsh1236I CGCG 1 cut(s) 993
Bsh1285I CGRYCG 2 cut(s) 313, 595
BshFI GGCC 5 cut(s) 31, 235, 354, 690, 780
BshNI GGYRCC 2 cut(s) 633, 930
BsiEI CGRYCG 2 cut(s) 313, 595
BsiHKAI GWGCWC 2 cut(s) 819, 1024
BsiHKCI CYCGRG 1 cut(s) 467
BsiSI CCGG 9 cut(s) 164, 254, 604, 612, 687, 716, 757, 777, 811
BslFI GGGAC 1 cut(s) 146
BslI CCNNNNNNNGG 5 cut(s) 282, 756, 776, 861, 907
BsmAI GTCTC 4 cut(s) 309, 354, 375, 585
BsmBI CGTCTC 1 cut(s) 309
BsmFI GGGAC 1 cut(s) 146
BsnI GGCC 5 cut(s) 31, 235, 354, 690, 780
Bso31I GGTCTC 1 cut(s) 585
BsoBI CYCGRG 1 cut(s) 467
Bsp119I TTCGAA 1 cut(s) 949
Bsp1286I GDGCHC 4 cut(s) 64, 819, 935, 1024
Bsp13I TCCGGA 1 cut(s) 756
Bsp143I GATC 4 cut(s) 310, 614, 798, 807
BspACI CCGC 8 cut(s) 595, 598, 619, 674, 679, 737, 794, 993
BspANI GGCC 5 cut(s) 31, 235, 354, 690, 780
BspCNI CTCAG 3 cut(s) 229, 324, 839
BspEI TCCGGA 1 cut(s) 756
BspFNI CGCG 1 cut(s) 993
BspHI TCATGA 1 cut(s) 265
BspLI GGNNCC 6 cut(s) 162, 616, 635, 781, 841, 932
BspOI GCTAGC 1 cut(s) 422
BspPI GGATC 3 cut(s) 609, 622, 802
BspQI GCTCTTC 1 cut(s) 339
BspT104I TTCGAA 1 cut(s) 949
BspT107I GGYRCC 2 cut(s) 633, 930
BspTNI GGTCTC 1 cut(s) 585
BsrDI GCAATG 1 cut(s) 245
BsrI ACTGG 4 cut(s) 24, 146, 326, 932
BssECI CCNNGG 2 cut(s) 276, 355
BssMI GATC 4 cut(s) 310, 614, 798, 807
BssNI GRCGYC 3 cut(s) 78, 105, 761
BssT1I CCWWGG 1 cut(s) 355
Bst2UI CCWGG 1 cut(s) 427
Bst4CI ACNGT 2 cut(s) 579, 774
Bst6I CTCTTC 1 cut(s) 339
BstACI GRCGYC 3 cut(s) 78, 105, 761
BstBI TTCGAA 1 cut(s) 949
BstC8I GCNNGC 3 cut(s) 420, 495, 683
BstDEI CTNAG 4 cut(s) 237, 332, 826, 904
BstDSI CCRYGG 1 cut(s) 276
BstENI CCTNNNNNAGG 1 cut(s) 905
BstF5I GGATG 4 cut(s) 297, 321, 419, 438
BstFNI CGCG 1 cut(s) 993
BstHHI GCGC 1 cut(s) 697
BstKTI GATC 4 cut(s) 313, 617, 801, 810
BstMAI GTCTC 4 cut(s) 309, 354, 375, 585
BstMBI GATC 4 cut(s) 310, 614, 798, 807
BstMCI CGRYCG 2 cut(s) 313, 595
BstMWI GCNNNNNNNGC 4 cut(s) 490, 682, 687, 999
BstNI CCWGG 1 cut(s) 427
BstNSI RCATGY 1 cut(s) 497
BstSCI CCNGG 5 cut(s) 162, 252, 425, 685, 810
BstSLI GKGCMC 1 cut(s) 935
BstUI CGCG 1 cut(s) 993
BstV1I GCAGC 2 cut(s) 778, 1011
BstV2I GAAGAC 1 cut(s) 108
BstX2I RGATCY 2 cut(s) 614, 807
BstYI RGATCY 2 cut(s) 614, 807
BsuRI GGCC 5 cut(s) 31, 235, 354, 690, 780
BtgI CCRYGG 1 cut(s) 276
BtgZI GCGATG 1 cut(s) 608
BtsCI GGATG 4 cut(s) 297, 321, 419, 438
BtsIMutI CAGTG 1 cut(s) 925
Cac8I GCNNGC 3 cut(s) 420, 495, 683
CciI TCATGA 1 cut(s) 265
CfoI GCGC 1 cut(s) 697
Cfr13I GGNCC 3 cut(s) 160, 718, 779
CpoI CGGWCCG 1 cut(s) 718
CseI GACGC 2 cut(s) 67, 291
Csp6I GTAC 4 cut(s) 139, 319, 407, 871
CspI CGGWCCG 1 cut(s) 718
CviAII CATG 8 cut(s) 201, 266, 410, 494, 498, 802, 868, 1032
CviQI GTAC 4 cut(s) 139, 319, 407, 871
DdeI CTNAG 4 cut(s) 237, 332, 826, 904
DpnI GATC 4 cut(s) 312, 616, 800, 809
DpnII GATC 4 cut(s) 310, 614, 798, 807
EaeI YGGCCR 1 cut(s) 29
Eam1104I CTCTTC 1 cut(s) 339
EarI CTCTTC 1 cut(s) 339
Ecl136II GAGCTC 1 cut(s) 1022
Eco130I CCWWGG 1 cut(s) 355
Eco147I AGGCCT 1 cut(s) 354
Eco24I GRGCYC 2 cut(s) 64, 1024
Eco31I GGTCTC 1 cut(s) 585
Eco47I GGWCC 2 cut(s) 160, 718
Eco53kI GAGCTC 1 cut(s) 1022
Eco88I CYCGRG 1 cut(s) 467
EcoICRI GAGCTC 1 cut(s) 1022
EcoNI CCTNNNNNAGG 1 cut(s) 905
EcoO109I RGGNCCY 1 cut(s) 160
EcoRII CCWGG 1 cut(s) 425
EcoT14I CCWWGG 1 cut(s) 355
EcoT22I ATGCAT 1 cut(s) 499
EcoT38I GRGCYC 2 cut(s) 64, 1024
ErhI CCWWGG 1 cut(s) 355
Esp3I CGTCTC 1 cut(s) 309
FaeI CATG 8 cut(s) 204, 269, 413, 497, 501, 805, 871, 1035
FalI AAGNNNNNCTT 4 cut(s) 93, 125, 525, 557
FaqI GGGAC 1 cut(s) 146
FatI CATG 8 cut(s) 200, 265, 409, 493, 497, 801, 867, 1031
FauI CCCGC 1 cut(s) 626
FauNDI CATATG 1 cut(s) 570
FblI GTMKAC 1 cut(s) 399
Fnu4HI GCNGC 4 cut(s) 598, 767, 794, 1000
FokI GGATG 4 cut(s) 304, 328, 425, 426
FriOI GRGCYC 2 cut(s) 64, 1024
Fsp4HI GCNGC 4 cut(s) 598, 767, 794, 1000
FspBI CTAG 1 cut(s) 419
GlaI GCGC 1 cut(s) 696
GluI GCNGC 4 cut(s) 598, 767, 794, 1000
GsuI CTGGAG 1 cut(s) 993
HaeIII GGCC 5 cut(s) 31, 235, 354, 690, 780
HapII CCGG 9 cut(s) 164, 254, 604, 612, 687, 716, 757, 777, 811
HgaI GACGC 2 cut(s) 67, 291
HhaI GCGC 1 cut(s) 697
Hin1I GRCGYC 3 cut(s) 78, 105, 761
Hin1II CATG 8 cut(s) 204, 269, 413, 497, 501, 805, 871, 1035
Hin6I GCGC 1 cut(s) 695
HinP1I GCGC 1 cut(s) 695
HinfI GANTC 6 cut(s) 197, 241, 658, 753, 851, 951
HpaII CCGG 9 cut(s) 164, 254, 604, 612, 687, 716, 757, 777, 811
HphI GGTGA 2 cut(s) 469, 660
Hpy166II GTNNAC 2 cut(s) 46, 400
Hpy188I TCNGA 3 cut(s) 315, 507, 1026
Hpy188III TCNNGA 6 cut(s) 154, 266, 308, 545, 757, 848
Hpy8I GTNNAC 2 cut(s) 46, 400
Hpy99I CGWCG 3 cut(s) 83, 766, 838
HpyAV CCTTC 2 cut(s) 151, 551
HpyCH4III ACNGT 2 cut(s) 579, 774
HpyCH4IV ACGT 3 cut(s) 105, 728, 761
HpyCH4V TGCA 4 cut(s) 136, 295, 493, 497
HpyF10VI GCNNNNNNNGC 4 cut(s) 490, 682, 687, 999
HpyF3I CTNAG 4 cut(s) 237, 332, 826, 904
HpySE526I ACGT 3 cut(s) 105, 728, 761
Hsp92I GRCGYC 3 cut(s) 78, 105, 761
Hsp92II CATG 8 cut(s) 204, 269, 413, 497, 501, 805, 871, 1035
HspAI GCGC 1 cut(s) 695
Kpn2I TCCGGA 1 cut(s) 756
Kzo9I GATC 4 cut(s) 310, 614, 798, 807
LguI GCTCTTC 1 cut(s) 339
LmnI GCTCC 5 cut(s) 255, 526, 814, 1019, 1027
Lsp1109I GCAGC 2 cut(s) 778, 1011
LweI GCATC 2 cut(s) 250, 282
MaeI CTAG 1 cut(s) 419
MaeII ACGT 3 cut(s) 105, 728, 761
MaeIII GTNAC 1 cut(s) 916
MalI GATC 4 cut(s) 312, 616, 800, 809
MboI GATC 4 cut(s) 310, 614, 798, 807
MboII GAAGA 6 cut(s) 17, 110, 113, 236, 269, 356
MflI RGATCY 2 cut(s) 614, 807
MhlI GDGCHC 4 cut(s) 64, 819, 935, 1024
MlsI TGGCCA 1 cut(s) 31
MluCI AATT 2 cut(s) 125, 461
MluNI TGGCCA 1 cut(s) 31
MlyI GAGTC 2 cut(s) 206, 652
MmeI TCCRAC 2 cut(s) 138, 686
Mox20I TGGCCA 1 cut(s) 31
Mph1103I ATGCAT 1 cut(s) 499
MroI TCCGGA 1 cut(s) 756
MroXI GAANNNNTTC 1 cut(s) 371
MscI TGGCCA 1 cut(s) 31
MseI TTAA 1 cut(s) 513
Msp20I TGGCCA 1 cut(s) 31
MspI CCGG 9 cut(s) 164, 254, 604, 612, 687, 716, 757, 777, 811
MspR9I CCNGG 5 cut(s) 164, 254, 427, 687, 812
MvaI CCWGG 1 cut(s) 427
MvnI CGCG 1 cut(s) 993
MwoI GCNNNNNNNGC 4 cut(s) 490, 682, 687, 999
NciI CCSGG 4 cut(s) 164, 254, 687, 812
NdeI CATATG 1 cut(s) 570
NdeII GATC 4 cut(s) 310, 614, 798, 807
NheI GCTAGC 1 cut(s) 418
NlaIII CATG 8 cut(s) 204, 269, 413, 497, 501, 805, 871, 1035
NlaIV GGNNCC 6 cut(s) 162, 616, 635, 781, 841, 932
NmuCI GTSAC 1 cut(s) 916
NsiI ATGCAT 1 cut(s) 499
NspI RCATGY 1 cut(s) 497
NspV TTCGAA 1 cut(s) 949
PaeI GCATGC 1 cut(s) 497
PaeR7I CTCGAG 1 cut(s) 467
PagI TCATGA 1 cut(s) 265
PceI AGGCCT 1 cut(s) 354
PciSI GCTCTTC 1 cut(s) 339
PcsI WCGNNNNNNNCGW 1 cut(s) 770
PdmI GAANNNNTTC 1 cut(s) 371
PfeI GAWTC 4 cut(s) 241, 753, 851, 951
PflFI GACNNNGTC 1 cut(s) 577
PfoI TCCNGGA 2 cut(s) 252, 810
PkrI GCNGC 4 cut(s) 599, 768, 795, 1001
Ple19I CGATCG 1 cut(s) 313
PleI GAGTC 2 cut(s) 205, 652
PpsI GAGTC 2 cut(s) 205, 652
PpuMI RGGWCCY 1 cut(s) 160
Psp124BI GAGCTC 1 cut(s) 1024
Psp5II RGGWCCY 1 cut(s) 160
Psp6I CCWGG 1 cut(s) 425
PspGI CCWGG 1 cut(s) 425
PspN4I GGNNCC 6 cut(s) 162, 616, 635, 781, 841, 932
PspPI GGNCC 3 cut(s) 160, 718, 779
PspPPI RGGWCCY 1 cut(s) 160
PspXI VCTCGAGB 1 cut(s) 467
PsuI RGATCY 2 cut(s) 614, 807
PsyI GACNNNGTC 1 cut(s) 577
PvuI CGATCG 1 cut(s) 313
RsaI GTAC 4 cut(s) 140, 320, 408, 872
RsaNI GTAC 4 cut(s) 139, 319, 407, 871
Rsr2I CGGWCCG 1 cut(s) 718
RsrII CGGWCCG 1 cut(s) 718
SacI GAGCTC 1 cut(s) 1024
SapI GCTCTTC 1 cut(s) 339
SaqAI TTAA 1 cut(s) 513
SatI GCNGC 4 cut(s) 598, 767, 794, 1000
Sau3AI GATC 4 cut(s) 310, 614, 798, 807
Sau96I GGNCC 3 cut(s) 160, 718, 779
SchI GAGTC 2 cut(s) 206, 652
ScrFI CCNGG 5 cut(s) 164, 254, 427, 687, 812
SduI GDGCHC 4 cut(s) 64, 819, 935, 1024
SfaNI GCATC 2 cut(s) 250, 282
Sfr274I CTCGAG 1 cut(s) 467
SfuI TTCGAA 1 cut(s) 949
SinI GGWCC 2 cut(s) 160, 718
SlaI CTCGAG 1 cut(s) 467
SmlI CTYRAG 1 cut(s) 467
SmoI CTYRAG 1 cut(s) 467
SphI GCATGC 1 cut(s) 497
Sse9I AATT 2 cut(s) 125, 461
SseBI AGGCCT 1 cut(s) 354
SsiI CCGC 8 cut(s) 595, 598, 619, 674, 679, 737, 794, 993
SspMI CTAG 1 cut(s) 419
SstI GAGCTC 1 cut(s) 1024
StuI AGGCCT 1 cut(s) 354
StyD4I CCNGG 5 cut(s) 162, 252, 425, 685, 810
StyI CCWWGG 1 cut(s) 355
TaaI ACNGT 2 cut(s) 579, 774
TaiI ACGT 3 cut(s) 108, 731, 764
TaqI TCGA 7 cut(s) 81, 468, 487, 710, 833, 849, 949
TaqII GACCGA 1 cut(s) 735
TasI AATT 2 cut(s) 125, 461
TatI WGTACW 3 cut(s) 138, 318, 870
TauI GCSGC 2 cut(s) 600, 796
TfiI GAWTC 4 cut(s) 241, 753, 851, 951
Tru1I TTAA 1 cut(s) 513
Tru9I TTAA 1 cut(s) 513
TscAI CASTG 1 cut(s) 932
TseFI GTSAC 1 cut(s) 916
TseI GCWGC 2 cut(s) 766, 999
Tsp45I GTSAC 1 cut(s) 916
TspDTI ATGAA 1 cut(s) 164
TspRI CASTG 1 cut(s) 932
Tth111I GACNNNGTC 1 cut(s) 577
VpaK11BI GGWCC 2 cut(s) 160, 718
XagI CCTNNNNNAGG 1 cut(s) 905
XceI RCATGY 1 cut(s) 497
XhoI CTCGAG 1 cut(s) 467
XmiI GTMKAC 1 cut(s) 399
XmnI GAANNNNTTC 1 cut(s) 371
XspI CTAG 1 cut(s) 419
ZraI GACGTC 2 cut(s) 106, 762
Zsp2I ATGCAT 1 cut(s) 499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.