RLG00000020455

Glutathione S-transferase, N-terminal domain

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
65248452 .. 65249446
995 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020455

Sequence Viewer

Length: 651 bp
ATGCCACCGTCGATTGATTGGCTTCAGTTAACATCAAGATTGACTGCGAAAGTTCCTTCCGTTAAACATTTTGACCGCCTGGGTTATGATCAACAAAGAAAAATCTTGTCTGGAGATACAGTGAAGTTGCTGGGCAAGTCCTTTTGCCGTAAGTGTCGCATGGACTTTGAAGCTGAAGGAGATAGAGTACGATCACTGGTCATACTTGAATACCTTGACGAGACTAGGAAGCAAAATCCAATCCTGCCAGAAGATTCCTATGAAAGAGCTCAGGCGCGCTTCTGGGCCAAATTTTGTGCGCTAGTAATCATGAGTGCATTCACAAAGAAAGGGGAACAGAAAGGGAAGGCTGCAAAAGAAGCTAGAGAGAATCTCAAGATTCTGGAAAGTGGACATGGGGAAAAGCAATTCTTTGGAGGTGAAAGCATAGGCTTTGTAGACATAGCTGCTGGGTGGATTGGAATATGGGCTAGAATGGTTGAGGAGATTGCAGAAGTAAATCTAATTGATACCGAGACGATGCCTCTGCTTGACGCTTGGTTCAGAAGATTTCTTGAGGTTTCAATTATGAAAGAATGCCTGCCACCTCAAGATAAACTGCTGGAGCACAACAAAGGCTTTCAAAAGATATTGACTGGAGGATCAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

217

Amino Acids

24.64

Weight (kDa)

8.29

Isoelectric Point (pI)

42.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_C PF00043 97 - 185 1.7e-06 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 438
AccII CGCG 1 cut(s) 277
AciI CCGC 1 cut(s) 76
AclWI GGATC 1 cut(s) 649
AcsI RAATTY 1 cut(s) 290
AcuI CTGAAG 2 cut(s) 8, 195
AfaI GTAC 1 cut(s) 189
AgsI TTSAA 4 cut(s) 170, 209, 564, 623
AjnI CCWGG 1 cut(s) 78
AluBI AGCT 4 cut(s) 173, 269, 362, 446
AluI AGCT 4 cut(s) 173, 269, 362, 446
Alw21I GWGCWC 2 cut(s) 271, 609
Alw26I GTCTC 2 cut(s) 215, 509
AlwI GGATC 1 cut(s) 649
AoxI GGCC 1 cut(s) 285
ApeKI GCWGC 2 cut(s) 350, 446
ApoI RAATTY 1 cut(s) 290
AspLEI GCGC 3 cut(s) 277, 279, 301
AspS9I GGNCC 1 cut(s) 285
AsuHPI GGTGA 1 cut(s) 431
BanII GRGCYC 1 cut(s) 271
Bbv12I GWGCWC 2 cut(s) 271, 609
BbvI GCAGC 2 cut(s) 337, 433
BceAI ACGGC 1 cut(s) 132
BcgI CGANNNNNNTGC 2 cut(s) 508, 542
BciT130I CCWGG 1 cut(s) 80
BclI TGATCA 1 cut(s) 88
BcoDI GTCTC 2 cut(s) 215, 509
BfaI CTAG 4 cut(s) 225, 302, 363, 471
BisI GCNGC 2 cut(s) 351, 447
BlsI GCNGC 2 cut(s) 352, 448
Bme1390I CCNGG 1 cut(s) 80
BmgT120I GGNCC 1 cut(s) 285
BmrFI CCNGG 1 cut(s) 80
BmsI GCATC 1 cut(s) 510
BplI GAGNNNNNCTC 2 cut(s) 357, 389
BpmI CTGGAG 2 cut(s) 132, 623
Bpu10I CCTNAGC 1 cut(s) 270
BpuEI CTTGAG 3 cut(s) 359, 573, 575
BsaJI CCNNGG 1 cut(s) 79
BsaXI ACNNNNNCTCC 4 cut(s) 105, 135, 171, 201
Bse1I ACTGG 2 cut(s) 201, 640
BseBI CCWGG 1 cut(s) 80
BseDI CCNNGG 1 cut(s) 79
BseMII CTCAG 1 cut(s) 284
BseNI ACTGG 2 cut(s) 201, 640
BsePI GCGCGC 1 cut(s) 275
BseRI GAGGAG 1 cut(s) 497
BseXI GCAGC 2 cut(s) 337, 433
BseYI CCCAGC 2 cut(s) 130, 449
Bsh1236I CGCG 1 cut(s) 277
BshFI GGCC 1 cut(s) 287
BsiHKAI GWGCWC 2 cut(s) 271, 609
BsmAI GTCTC 2 cut(s) 215, 509
BsmBI CGTCTC 1 cut(s) 509
BsmI GAATGC 2 cut(s) 317, 581
BsnI GGCC 1 cut(s) 287
Bsp1286I GDGCHC 2 cut(s) 271, 609
Bsp143I GATC 3 cut(s) 88, 191, 641
BspACI CCGC 1 cut(s) 76
BspANI GGCC 1 cut(s) 287
BspCNI CTCAG 1 cut(s) 283
BspFNI CGCG 1 cut(s) 277
BspHI TCATGA 1 cut(s) 309
BspPI GGATC 1 cut(s) 649
BsrI ACTGG 2 cut(s) 201, 640
BssECI CCNNGG 1 cut(s) 79
BssHII GCGCGC 1 cut(s) 275
BssMI GATC 3 cut(s) 88, 191, 641
Bst2UI CCWGG 1 cut(s) 80
Bst4CI ACNGT 2 cut(s) 9, 121
BstC8I GCNNGC 2 cut(s) 277, 581
BstDEI CTNAG 1 cut(s) 270
BstFNI CGCG 1 cut(s) 277
BstHHI GCGC 3 cut(s) 277, 279, 301
BstKTI GATC 3 cut(s) 91, 194, 644
BstMAI GTCTC 2 cut(s) 215, 509
BstMBI GATC 3 cut(s) 88, 191, 641
BstMWI GCNNNNNNNGC 1 cut(s) 359
BstNI CCWGG 1 cut(s) 80
BstSCI CCNGG 1 cut(s) 78
BstUI CGCG 1 cut(s) 277
BstV1I GCAGC 2 cut(s) 337, 433
BsuRI GGCC 1 cut(s) 287
BtsIMutI CAGTG 2 cut(s) 126, 194
Cac8I GCNNGC 2 cut(s) 277, 581
CciI TCATGA 1 cut(s) 309
CfoI GCGC 3 cut(s) 277, 279, 301
Cfr13I GGNCC 1 cut(s) 285
CseI GACGC 1 cut(s) 542
Csp6I GTAC 1 cut(s) 188
CviAII CATG 3 cut(s) 160, 310, 395
CviQI GTAC 1 cut(s) 188
DdeI CTNAG 1 cut(s) 270
DpnI GATC 3 cut(s) 90, 193, 643
DpnII GATC 3 cut(s) 88, 191, 641
Ecl136II GAGCTC 1 cut(s) 269
Eco24I GRGCYC 1 cut(s) 271
Eco53kI GAGCTC 1 cut(s) 269
Eco57I CTGAAG 2 cut(s) 8, 195
EcoICRI GAGCTC 1 cut(s) 269
EcoRII CCWGG 1 cut(s) 78
EcoT38I GRGCYC 1 cut(s) 271
Esp3I CGTCTC 1 cut(s) 509
FaeI CATG 3 cut(s) 163, 313, 398
FalI AAGNNNNNCTT 2 cut(s) 395, 427
FatI CATG 3 cut(s) 159, 309, 394
FbaI TGATCA 1 cut(s) 88
FblI GTMKAC 1 cut(s) 438
Fnu4HI GCNGC 2 cut(s) 351, 447
FriOI GRGCYC 1 cut(s) 271
Fsp4HI GCNGC 2 cut(s) 351, 447
FspBI CTAG 4 cut(s) 225, 302, 363, 471
GlaI GCGC 3 cut(s) 276, 278, 300
GluI GCNGC 2 cut(s) 351, 447
GsaI CCCAGC 2 cut(s) 134, 453
GsuI CTGGAG 2 cut(s) 132, 623
HaeIII GGCC 1 cut(s) 287
HgaI GACGC 1 cut(s) 542
HhaI GCGC 3 cut(s) 277, 279, 301
Hin1II CATG 3 cut(s) 163, 313, 398
Hin6I GCGC 3 cut(s) 275, 277, 299
HinP1I GCGC 3 cut(s) 275, 277, 299
HincII GTYRAC 1 cut(s) 30
HindII GTYRAC 1 cut(s) 30
HinfI GANTC 3 cut(s) 254, 370, 379
HpaI GTTAAC 1 cut(s) 30
HphI GGTGA 1 cut(s) 431
Hpy166II GTNNAC 3 cut(s) 30, 392, 439
Hpy188I TCNGA 1 cut(s) 545
Hpy188III TCNNGA 7 cut(s) 36, 111, 310, 376, 383, 554, 590
Hpy8I GTNNAC 3 cut(s) 30, 392, 439
Hpy99I CGWCG 1 cut(s) 13
HpyAV CCTTC 3 cut(s) 66, 170, 340
HpyCH4III ACNGT 2 cut(s) 9, 121
HpyCH4V TGCA 3 cut(s) 317, 353, 491
HpyF10VI GCNNNNNNNGC 1 cut(s) 359
HpyF3I CTNAG 1 cut(s) 270
Hsp92II CATG 3 cut(s) 163, 313, 398
HspAI GCGC 3 cut(s) 275, 277, 299
Ksp22I TGATCA 1 cut(s) 88
KspAI GTTAAC 1 cut(s) 30
Kzo9I GATC 3 cut(s) 88, 191, 641
LmnI GCTCC 1 cut(s) 604
Lsp1109I GCAGC 2 cut(s) 337, 433
LweI GCATC 1 cut(s) 510
MaeI CTAG 4 cut(s) 225, 302, 363, 471
MalI GATC 3 cut(s) 90, 193, 643
MboI GATC 3 cut(s) 88, 191, 641
MboII GAAGA 2 cut(s) 263, 558
MhlI GDGCHC 2 cut(s) 271, 609
MluCI AATT 4 cut(s) 290, 407, 504, 564
MnlI CCTC 6 cut(s) 410, 475, 534, 550, 597, 632
MseI TTAA 2 cut(s) 29, 63
MspR9I CCNGG 1 cut(s) 80
Mva1269I GAATGC 2 cut(s) 317, 581
MvaI CCWGG 1 cut(s) 80
MvnI CGCG 1 cut(s) 277
MwoI GCNNNNNNNGC 1 cut(s) 359
NdeII GATC 3 cut(s) 88, 191, 641
NlaIII CATG 3 cut(s) 163, 313, 398
PagI TCATGA 1 cut(s) 309
PauI GCGCGC 1 cut(s) 275
PctI GAATGC 2 cut(s) 317, 581
PfeI GAWTC 3 cut(s) 254, 370, 379
PkrI GCNGC 2 cut(s) 352, 448
Psp124BI GAGCTC 1 cut(s) 271
Psp6I CCWGG 1 cut(s) 78
PspFI CCCAGC 2 cut(s) 130, 449
PspGI CCWGG 1 cut(s) 78
PspPI GGNCC 1 cut(s) 285
PteI GCGCGC 1 cut(s) 275
RsaI GTAC 1 cut(s) 189
RsaNI GTAC 1 cut(s) 188
SacI GAGCTC 1 cut(s) 271
SaqAI TTAA 2 cut(s) 29, 63
SatI GCNGC 2 cut(s) 351, 447
Sau3AI GATC 3 cut(s) 88, 191, 641
Sau96I GGNCC 1 cut(s) 285
ScrFI CCNGG 1 cut(s) 80
SduI GDGCHC 2 cut(s) 271, 609
SetI ASST 8 cut(s) 175, 216, 271, 364, 421, 448, 561, 589
SfaNI GCATC 1 cut(s) 510
SmlI CTYRAG 3 cut(s) 374, 554, 588
SmoI CTYRAG 3 cut(s) 374, 554, 588
Sse9I AATT 4 cut(s) 290, 407, 504, 564
SsiI CCGC 1 cut(s) 76
SspMI CTAG 4 cut(s) 225, 302, 363, 471
SstI GAGCTC 1 cut(s) 271
StyD4I CCNGG 1 cut(s) 78
TaaI ACNGT 2 cut(s) 9, 121
TaqI TCGA 1 cut(s) 11
TasI AATT 4 cut(s) 290, 407, 504, 564
TfiI GAWTC 3 cut(s) 254, 370, 379
Tru1I TTAA 2 cut(s) 29, 63
Tru9I TTAA 2 cut(s) 29, 63
TscAI CASTG 2 cut(s) 126, 201
TseI GCWGC 2 cut(s) 350, 446
TspDTI ATGAA 2 cut(s) 276, 584
TspGWI ACGGA 1 cut(s) 49
TspRI CASTG 2 cut(s) 126, 201
XapI RAATTY 1 cut(s) 290
XmiI GTMKAC 1 cut(s) 438
XspI CTAG 4 cut(s) 225, 302, 363, 471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.