Rroxscaffold_7G00182730
ERF Family

Belongs to the GST superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000081
Physical Location & Seq
Reverse (-)
21839348 .. 21843138
3791 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00182730.1

Sequence Viewer

Length: 1209 bp
ATGGAGGAAGTGAAGGTAATAGGATTCTGGACAAGTCCATATGTTTACAGGGTTACATGGGCTCTGAAACTCAAGGGAGTCGAATATGAATATCAAGAAGAGGACATATGGAACAAGAGTGATTTGCTTCTTCAGTACAACCCAGTGCACAAGAAGGTTCCAGTGTTCGTTCATGGTGGAAAGACGATTGTAGAGTCGGGTATTATTCTGGAGTACATTGACGAGACCTGGCCGCAGAACCCTCTAGTTCCAACAGACCCTCATGCGAGGGCCATGGCTCGATTTTGGATAAAGTTTGTTGGTGACAAGATGCAGAACTTTCAACGATATTTCTTCAAAAGAGCTGGACAAGAGCAAATAAAAGCAACAAAAGAAGCCCAGGAGTATCTGAAGATCTTAGAAGACCATGGCCCTGAGGAGAAGAAGTTCTTTGATGGTGACAACATTGGAATGACAGACTTATCCATGGGATGGCTAGCATTCTGGCTTGAGGCCATGGAAGAAGCATCTGGTGTACAAGTTCTCGAAGCCAATAGCTTCCCTCGCTTGCACGCATGGATTAGAAATTTCAAGCAGGTTCCAGTTCTTGTTCATGCCGGAAATCCAATCGCAGAGTCCGCTGTCATTCTTGAGTACATCGAAGAGACGTGGCCACAGAACCCCTTGCTTCCTAAAGACCCTCATGGACGAGCTCTGGCTCGATTCTGGACAAAGTTCGGAGAGGACAAGAGCCCAGCCCTGTTTGGATTTTTCTCAACTGAGGGAGAACAACAAGTGAAAGCAACAGAAGAAGGGCAGGAGCAACTGAGAATCTTGGAAGAGCAGGGCCTCGGTGACAAGAAGTTTTTAAGCCCAGCCCTGTTTGGATTTTTCTCAACTGAGGGAGAACAACAAGTGAAAGCAACAGAAGAAGGGCAGGAGCAACTGAGAATCTTGGAAGAGCAGGGCCTCGGTGACAAGAAGTTTTTCGGTGGAGACGAGATTGGAATGGCTGATTTAGAATTTGGATGGCTAGCTTGGTGGCTGGAAGTCTTGAGTGAAGCAGCTGGGGTTAAAGTGATTGAAGTCGAAAGCTTCCCTCGCTTACATGCATGGATTCAAAGGTTCAAGGAGATTCCCACAATCAAAGAGACCCTTCCTGATCGCAGTGCAATGTTGACCTATTTCAAAGATGGAAGAGCAACAATTCTTGCTTCAGCAAAATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
GST_C GST_C_2 GST_N

Protein Analysis

402

Amino Acids

46.2

Weight (kDa)

5.05

Isoelectric Point (pI)

42.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 3 - 75 2.1e-19 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 8 - 80 1.8e-13 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 11 - 76 8.9e-14 Glutathione S-transferase, N-terminal domain
GST_C_2 PF13410 122 - 188 2.4e-06 Glutathione S-transferase, C-terminal domain
DUF7962 PF25907 141 - 193 9e-06 Domain of unknown function (DUF7962)
GST_N PF02798 179 - 214 1.2e-07 Glutathione S-transferase, N-terminal domain
GST_C PF00043 296 - 373 8.2e-08 Glutathione S-transferase, C-terminal domain
DUF7962 PF25907 300 - 371 2.4e-08 Domain of unknown function (DUF7962)
GST_C_2 PF13410 306 - 368 4.3e-07 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 565
AccB7I CCANNNNNTGG 1 cut(s) 471
AciI CCGC 2 cut(s) 233, 618
AcoI YGGCCR 2 cut(s) 230, 650
AcsI RAATTY 2 cut(s) 565, 1001
AcuI CTGAAG 3 cut(s) 116, 410, 1179
AfaI GTAC 4 cut(s) 137, 215, 516, 635
AfiI CCNNNNNNNGG 1 cut(s) 471
AgsI TTSAA 7 cut(s) 323, 337, 571, 1064, 1100, 1108, 1168
AjiI CACGTC 1 cut(s) 648
AjnI CCWGG 2 cut(s) 227, 378
AloI GAACNNNNNNTCC 2 cut(s) 410, 442
AluBI AGCT 6 cut(s) 344, 537, 692, 1016, 1046, 1074
AluI AGCT 6 cut(s) 344, 537, 692, 1016, 1046, 1074
Alw21I GWGCWC 2 cut(s) 150, 694
Alw26I GTCTC 4 cut(s) 218, 638, 969, 1124
Alw44I GTGCAC 1 cut(s) 146
AoxI GGCC 7 cut(s) 230, 270, 409, 492, 650, 826, 946
ApaLI GTGCAC 1 cut(s) 146
ApeKI GCWGC 1 cut(s) 1043
ApoI RAATTY 2 cut(s) 565, 1001
Asp700I GAANNNNTTC 2 cut(s) 425, 965
AspS9I GGNCC 4 cut(s) 270, 410, 826, 946
AsuHPI GGTGA 4 cut(s) 314, 449, 845, 965
AsuNHI GCTAGC 2 cut(s) 475, 1012
AxyI CCTNAGG 1 cut(s) 414
BaeGI GKGCMC 1 cut(s) 150
BalI TGGCCA 1 cut(s) 652
BanII GRGCYC 3 cut(s) 64, 694, 734
BbsI GAAGAC 1 cut(s) 408
Bbv12I GWGCWC 2 cut(s) 150, 694
BbvI GCAGC 1 cut(s) 1055
BccI CCATC 4 cut(s) 428, 465, 1002, 1166
BciT130I CCWGG 2 cut(s) 229, 380
BcoDI GTCTC 4 cut(s) 218, 638, 969, 1124
BfaI CTAG 3 cut(s) 245, 476, 1013
BfuAI ACCTGC 1 cut(s) 565
BglII AGATCT 1 cut(s) 393
BisI GCNGC 2 cut(s) 233, 1044
BlsI GCNGC 2 cut(s) 234, 1045
Bme1390I CCNGG 2 cut(s) 229, 380
BmgBI CACGTC 1 cut(s) 648
BmgT120I GGNCC 4 cut(s) 270, 410, 826, 946
BmiI GGNNCC 2 cut(s) 159, 579
BmrFI CCNGG 2 cut(s) 229, 380
BmrI ACTGGG 1 cut(s) 137
BmsI GCATC 2 cut(s) 300, 515
BmtI GCTAGC 2 cut(s) 479, 1016
BmuI ACTGGG 1 cut(s) 137
BpiI GAAGAC 1 cut(s) 408
BpmI CTGGAG 1 cut(s) 230
BpuEI CTTGAG 4 cut(s) 56, 509, 650, 1054
BsaI GGTCTC 2 cut(s) 218, 1124
BsaJI CCNNGG 7 cut(s) 273, 378, 406, 465, 495, 829, 949
BsaXI ACNNNNNCTCC 2 cut(s) 410, 440
Bsc4I CCNNNNNNNGG 1 cut(s) 471
Bse1I ACTGG 3 cut(s) 143, 161, 581
Bse21I CCTNAGG 1 cut(s) 414
Bse3DI GCAATG 1 cut(s) 1158
BseBI CCWGG 2 cut(s) 229, 380
BseDI CCNNGG 7 cut(s) 273, 378, 406, 465, 495, 829, 949
BseGI GGATG 2 cut(s) 476, 1013
BseLI CCNNNNNNNGG 1 cut(s) 471
BseMI GCAATG 1 cut(s) 1158
BseMII CTCAG 5 cut(s) 405, 750, 797, 870, 917
BseNI ACTGG 3 cut(s) 143, 161, 581
BseRI GAGGAG 1 cut(s) 431
BseSI GKGCMC 1 cut(s) 150
BseXI GCAGC 1 cut(s) 1055
BseYI CCCAGC 3 cut(s) 733, 853, 1046
BshFI GGCC 7 cut(s) 232, 272, 411, 494, 652, 828, 948
BsiHKAI GWGCWC 2 cut(s) 150, 694
BsiSI CCGG 1 cut(s) 597
BslI CCNNNNNNNGG 1 cut(s) 471
BsmAI GTCTC 4 cut(s) 218, 638, 969, 1124
BsmBI CGTCTC 2 cut(s) 638, 969
BsmI GAATGC 1 cut(s) 479
BsnI GGCC 7 cut(s) 232, 272, 411, 494, 652, 828, 948
Bso31I GGTCTC 2 cut(s) 218, 1124
Bsp1286I GDGCHC 4 cut(s) 64, 150, 694, 734
Bsp1407I TGTACA 1 cut(s) 514
Bsp143I GATC 2 cut(s) 393, 1141
Bsp19I CCATGG 4 cut(s) 273, 406, 465, 495
BspACI CCGC 2 cut(s) 233, 618
BspANI GGCC 7 cut(s) 232, 272, 411, 494, 652, 828, 948
BspCNI CTCAG 5 cut(s) 406, 751, 798, 871, 918
BspLI GGNNCC 2 cut(s) 159, 579
BspMI ACCTGC 1 cut(s) 565
BspOI GCTAGC 2 cut(s) 479, 1016
BspQI GCTCTTC 3 cut(s) 813, 933, 1171
BspTNI GGTCTC 2 cut(s) 218, 1124
BsrDI GCAATG 1 cut(s) 1158
BsrGI TGTACA 1 cut(s) 514
BsrI ACTGG 3 cut(s) 143, 161, 581
BssECI CCNNGG 7 cut(s) 273, 378, 406, 465, 495, 829, 949
BssMI GATC 2 cut(s) 393, 1141
BssT1I CCWWGG 4 cut(s) 273, 406, 465, 495
Bst2UI CCWGG 2 cut(s) 229, 380
Bst6I CTCTTC 5 cut(s) 93, 636, 813, 933, 1171
BstAUI TGTACA 1 cut(s) 514
BstC8I GCNNGC 4 cut(s) 477, 548, 552, 1014
BstDEI CTNAG 6 cut(s) 397, 414, 759, 806, 879, 926
BstDSI CCRYGG 4 cut(s) 273, 406, 465, 495
BstF5I GGATG 2 cut(s) 476, 1013
BstKTI GATC 2 cut(s) 396, 1144
BstMAI GTCTC 4 cut(s) 218, 638, 969, 1124
BstMBI GATC 2 cut(s) 393, 1141
BstMWI GCNNNNNNNGC 3 cut(s) 543, 617, 1080
BstNI CCWGG 2 cut(s) 229, 380
BstNSI RCATGY 1 cut(s) 1091
BstSCI CCNGG 2 cut(s) 227, 378
BstSLI GKGCMC 1 cut(s) 150
BstV1I GCAGC 1 cut(s) 1055
BstV2I GAAGAC 1 cut(s) 408
BstX2I RGATCY 1 cut(s) 393
BstYI RGATCY 1 cut(s) 393
Bsu36I CCTNAGG 1 cut(s) 414
BsuRI GGCC 7 cut(s) 232, 272, 411, 494, 652, 828, 948
BtgI CCRYGG 4 cut(s) 273, 406, 465, 495
BtrI CACGTC 1 cut(s) 648
BtsCI GGATG 2 cut(s) 476, 1013
BtsI GCAGTG 1 cut(s) 1153
BtsIMutI CAGTG 3 cut(s) 150, 168, 1153
BveI ACCTGC 1 cut(s) 565
Cac8I GCNNGC 4 cut(s) 477, 548, 552, 1014
Cfr13I GGNCC 4 cut(s) 270, 410, 826, 946
Csp6I GTAC 4 cut(s) 136, 214, 515, 634
CviQI GTAC 4 cut(s) 136, 214, 515, 634
DdeI CTNAG 6 cut(s) 397, 414, 759, 806, 879, 926
DpnI GATC 2 cut(s) 395, 1143
DpnII GATC 2 cut(s) 393, 1141
EaeI YGGCCR 2 cut(s) 230, 650
Eam1104I CTCTTC 5 cut(s) 93, 636, 813, 933, 1171
EarI CTCTTC 5 cut(s) 93, 636, 813, 933, 1171
Ecl136II GAGCTC 1 cut(s) 692
Eco130I CCWWGG 4 cut(s) 273, 406, 465, 495
Eco24I GRGCYC 3 cut(s) 64, 694, 734
Eco31I GGTCTC 2 cut(s) 218, 1124
Eco53kI GAGCTC 1 cut(s) 692
Eco57I CTGAAG 3 cut(s) 116, 410, 1179
Eco81I CCTNAGG 1 cut(s) 414
EcoICRI GAGCTC 1 cut(s) 692
EcoO109I RGGNCCY 2 cut(s) 826, 946
EcoRII CCWGG 2 cut(s) 227, 378
EcoT14I CCWWGG 4 cut(s) 273, 406, 465, 495
EcoT22I ATGCAT 1 cut(s) 1093
EcoT38I GRGCYC 3 cut(s) 64, 694, 734
ErhI CCWWGG 4 cut(s) 273, 406, 465, 495
Esp3I CGTCTC 2 cut(s) 638, 969
FalI AAGNNNNNCTT 4 cut(s) 413, 445, 1119, 1151
FauNDI CATATG 2 cut(s) 40, 107
Fnu4HI GCNGC 2 cut(s) 233, 1044
FokI GGATG 2 cut(s) 483, 1020
FriOI GRGCYC 3 cut(s) 64, 694, 734
Fsp4HI GCNGC 2 cut(s) 233, 1044
FspBI CTAG 3 cut(s) 245, 476, 1013
GluI GCNGC 2 cut(s) 233, 1044
GsaI CCCAGC 3 cut(s) 737, 857, 1050
GsuI CTGGAG 1 cut(s) 230
HaeIII GGCC 7 cut(s) 232, 272, 411, 494, 652, 828, 948
HapII CCGG 1 cut(s) 597
HincII GTYRAC 1 cut(s) 1158
HindII GTYRAC 1 cut(s) 1158
HindIII AAGCTT 1 cut(s) 1072
HinfI GANTC 9 cut(s) 24, 78, 194, 614, 702, 810, 930, 1096, 1114
HpaII CCGG 1 cut(s) 597
HphI GGTGA 4 cut(s) 314, 449, 845, 965
Hpy166II GTNNAC 4 cut(s) 46, 148, 515, 1158
Hpy188I TCNGA 3 cut(s) 66, 390, 719
Hpy188III TCNNGA 8 cut(s) 28, 95, 209, 524, 629, 706, 1033, 1139
Hpy8I GTNNAC 4 cut(s) 46, 148, 515, 1158
HpyAV CCTTC 5 cut(s) 7, 148, 785, 905, 1145
HpyCH4IV ACGT 1 cut(s) 647
HpyCH4V TGCA 5 cut(s) 148, 313, 550, 1091, 1151
HpyF10VI GCNNNNNNNGC 3 cut(s) 543, 617, 1080
HpyF3I CTNAG 6 cut(s) 397, 414, 759, 806, 879, 926
HpySE526I ACGT 1 cut(s) 647
Kzo9I GATC 2 cut(s) 393, 1141
LguI GCTCTTC 3 cut(s) 813, 933, 1171
LmnI GCTCC 2 cut(s) 799, 919
Lsp1109I GCAGC 1 cut(s) 1055
LweI GCATC 2 cut(s) 300, 515
MaeI CTAG 3 cut(s) 245, 476, 1013
MaeII ACGT 1 cut(s) 647
MaeIII GTNAC 5 cut(s) 52, 302, 437, 833, 953
MalI GATC 2 cut(s) 395, 1143
MboI GATC 2 cut(s) 393, 1141
MflI RGATCY 1 cut(s) 393
MhlI GDGCHC 4 cut(s) 64, 150, 694, 734
MlsI TGGCCA 1 cut(s) 652
MluCI AATT 3 cut(s) 565, 1001, 1185
MluNI TGGCCA 1 cut(s) 652
MlyI GAGTC 3 cut(s) 87, 203, 623
MmeI TCCRAC 1 cut(s) 275
Mox20I TGGCCA 1 cut(s) 652
Mph1103I ATGCAT 1 cut(s) 1093
MroXI GAANNNNTTC 2 cut(s) 425, 965
MscI TGGCCA 1 cut(s) 652
MseI TTAA 3 cut(s) 848, 1053, 1207
MslI CAYNNNNRTG 1 cut(s) 449
Msp20I TGGCCA 1 cut(s) 652
MspA1I CMGCKG 2 cut(s) 620, 1046
MspI CCGG 1 cut(s) 597
MspR9I CCNGG 2 cut(s) 229, 380
Mva1269I GAATGC 1 cut(s) 479
MvaI CCWGG 2 cut(s) 229, 380
MwoI GCNNNNNNNGC 3 cut(s) 543, 617, 1080
NcoI CCATGG 4 cut(s) 273, 406, 465, 495
NdeI CATATG 2 cut(s) 40, 107
NdeII GATC 2 cut(s) 393, 1141
NheI GCTAGC 2 cut(s) 475, 1012
NlaIV GGNNCC 2 cut(s) 159, 579
NmuCI GTSAC 4 cut(s) 302, 437, 833, 953
NsiI ATGCAT 1 cut(s) 1093
NspI RCATGY 1 cut(s) 1091
PciSI GCTCTTC 3 cut(s) 813, 933, 1171
PcsI WCGNNNNNNNCGW 1 cut(s) 975
PctI GAATGC 1 cut(s) 479
PdmI GAANNNNTTC 2 cut(s) 425, 965
PfeI GAWTC 6 cut(s) 24, 702, 810, 930, 1096, 1114
PflMI CCANNNNNTGG 1 cut(s) 471
PkrI GCNGC 2 cut(s) 234, 1045
PleI GAGTC 3 cut(s) 86, 202, 622
PpsI GAGTC 3 cut(s) 86, 202, 622
Psp124BI GAGCTC 1 cut(s) 694
Psp6I CCWGG 2 cut(s) 227, 378
PspFI CCCAGC 3 cut(s) 733, 853, 1046
PspGI CCWGG 2 cut(s) 227, 378
PspN4I GGNNCC 2 cut(s) 159, 579
PspPI GGNCC 4 cut(s) 270, 410, 826, 946
PsuI RGATCY 1 cut(s) 393
PvuII CAGCTG 1 cut(s) 1046
RsaI GTAC 4 cut(s) 137, 215, 516, 635
RsaNI GTAC 4 cut(s) 136, 214, 515, 634
RseI CAYNNNNRTG 1 cut(s) 449
SacI GAGCTC 1 cut(s) 694
SapI GCTCTTC 3 cut(s) 813, 933, 1171
SaqAI TTAA 3 cut(s) 848, 1053, 1207
SatI GCNGC 2 cut(s) 233, 1044
Sau3AI GATC 2 cut(s) 393, 1141
Sau96I GGNCC 4 cut(s) 270, 410, 826, 946
SchI GAGTC 3 cut(s) 87, 203, 623
ScrFI CCNGG 2 cut(s) 229, 380
SduI GDGCHC 4 cut(s) 64, 150, 694, 734
SfaNI GCATC 2 cut(s) 300, 515
SmiMI CAYNNNNRTG 1 cut(s) 449
SmlI CTYRAG 4 cut(s) 71, 488, 629, 1033
SmoI CTYRAG 4 cut(s) 71, 488, 629, 1033
Sse9I AATT 3 cut(s) 565, 1001, 1185
SsiI CCGC 2 cut(s) 233, 618
SspMI CTAG 3 cut(s) 245, 476, 1013
SstI GAGCTC 1 cut(s) 694
StyD4I CCNGG 2 cut(s) 227, 378
StyI CCWWGG 4 cut(s) 273, 406, 465, 495
TaiI ACGT 1 cut(s) 650
TaqI TCGA 6 cut(s) 81, 280, 525, 639, 700, 1068
TasI AATT 3 cut(s) 565, 1001, 1185
TatI WGTACW 4 cut(s) 135, 213, 514, 633
TauI GCSGC 1 cut(s) 235
TfiI GAWTC 6 cut(s) 24, 702, 810, 930, 1096, 1114
Tru1I TTAA 3 cut(s) 848, 1053, 1207
Tru9I TTAA 3 cut(s) 848, 1053, 1207
TscAI CASTG 3 cut(s) 150, 168, 1153
TseFI GTSAC 4 cut(s) 302, 437, 833, 953
TseI GCWGC 1 cut(s) 1043
Tsp45I GTSAC 4 cut(s) 302, 437, 833, 953
TspDTI ATGAA 3 cut(s) 102, 161, 581
TspRI CASTG 3 cut(s) 150, 168, 1153
Van91I CCANNNNNTGG 1 cut(s) 471
VneI GTGCAC 1 cut(s) 146
XapI RAATTY 2 cut(s) 565, 1001
XceI RCATGY 1 cut(s) 1091
XmnI GAANNNNTTC 2 cut(s) 425, 965
XspI CTAG 3 cut(s) 245, 476, 1013
Zsp2I ATGCAT 1 cut(s) 1093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.