Rmu_sc0000888.1_g000017

glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000888.1
Physical Location & Seq
Reverse (-)
62672 .. 63498
827 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000888.1_g000017.1.cds

Sequence Viewer

Length: 609 bp
atgggagaggttattaagttgcttggcacaacacaaagctttccctgcgccaggattcagtgggctctaaggctcaagggtgtggagtatgagttcatagaagaagatttgcgaaacaagagtcccctccttctcaagtataaccctgtccacaagaagacatggaaggagaaccccttgcttcctcgggacccttacgaccgagccatggctcgcttttgggctaaatttgttgatgagaaggttgtgatcgcagtatggggagctttcacagccgaaggagaagagaaggagaaggctatagagtctgcactagaaccactagcatatcttgagcagcagattgaagggaagaagttatttggtggagaacaaatagggtaccttgatgtagtagtgggttggatatcacagtggctcaatgtgatggaagaagttggaggcatgaagctacttgaagctgagaggttcccatttctccatgaatggggtcagaacttcatccaagctccggccatcaaagaatgcattccactgagagaaaagcttgttgaatatttccattttagcctgaactaccgacgttccttagcagccaacaaaccatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

202

Amino Acids

23.47

Weight (kDa)

6.02

Isoelectric Point (pI)

40.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 381
AccB1I GGYRCC 1 cut(s) 381
AcoI YGGCCR 1 cut(s) 513
AcsI RAATTY 1 cut(s) 227
AfaI GTAC 1 cut(s) 383
AfiI CCNNNNNNNGG 4 cut(s) 51, 208, 487, 511
AgsI TTSAA 3 cut(s) 347, 458, 554
AjnI CCWGG 1 cut(s) 50
AloI GAACNNNNNNTCC 2 cut(s) 77, 109
AluBI AGCT 6 cut(s) 39, 266, 451, 461, 509, 547
AluI AGCT 6 cut(s) 39, 266, 451, 461, 509, 547
Ama87I CYCGRG 1 cut(s) 186
AoxI GGCC 1 cut(s) 513
ApeKI GCWGC 2 cut(s) 337, 593
ApoI RAATTY 1 cut(s) 227
ArsI GACNNNNNNTTYG 2 cut(s) 106, 138
Asp700I GAANNNNTTC 1 cut(s) 528
Asp718I GGTACC 1 cut(s) 381
AspLEI GCGC 1 cut(s) 50
AspS9I GGNCC 1 cut(s) 190
AvaI CYCGRG 1 cut(s) 186
AvaII GGWCC 1 cut(s) 190
BanI GGYRCC 1 cut(s) 381
BanII GRGCYC 1 cut(s) 67
BbsI GAAGAC 1 cut(s) 164
BbvI GCAGC 2 cut(s) 349, 605
BccI CCATC 2 cut(s) 421, 524
BciT130I CCWGG 1 cut(s) 52
BfaI CTAG 2 cut(s) 314, 323
BfmI CTRYAG 1 cut(s) 300
BisI GCNGC 2 cut(s) 338, 594
BlsI GCNGC 2 cut(s) 339, 595
Bme1390I CCNGG 1 cut(s) 52
Bme18I GGWCC 1 cut(s) 190
BmeT110I CYCGRG 1 cut(s) 186
BmgT120I GGNCC 1 cut(s) 190
BmiI GGNNCC 4 cut(s) 191, 192, 383, 470
BmrFI CCNGG 1 cut(s) 52
BpiI GAAGAC 1 cut(s) 164
Bpu10I CCTNAGC 1 cut(s) 589
BpuEI CTTGAG 3 cut(s) 59, 119, 353
BsaJI CCNNGG 2 cut(s) 185, 207
BsaXI ACNNNNNCTCC 2 cut(s) 77, 107
Bsc4I CCNNNNNNNGG 4 cut(s) 51, 208, 487, 511
BseBI CCWGG 1 cut(s) 52
BseDI CCNNGG 2 cut(s) 185, 207
BseGI GGATG 1 cut(s) 501
BseLI CCNNNNNNNGG 4 cut(s) 51, 208, 487, 511
BseMII CTCAG 2 cut(s) 453, 527
BseXI GCAGC 2 cut(s) 349, 605
BsgI GTGCAG 1 cut(s) 294
Bsh1285I CGRYCG 1 cut(s) 202
BshFI GGCC 1 cut(s) 515
BshNI GGYRCC 1 cut(s) 381
BsiEI CGRYCG 1 cut(s) 202
BsiHKCI CYCGRG 1 cut(s) 186
BsiSI CCGG 1 cut(s) 512
BslFI GGGAC 2 cut(s) 108, 203
BslI CCNNNNNNNGG 4 cut(s) 51, 208, 487, 511
BsmFI GGGAC 2 cut(s) 108, 203
BsmI GAATGC 2 cut(s) 528, 530
BsnI GGCC 1 cut(s) 515
BsoBI CYCGRG 1 cut(s) 186
Bsp1286I GDGCHC 1 cut(s) 67
Bsp143I GATC 1 cut(s) 249
Bsp19I CCATGG 1 cut(s) 207
BspANI GGCC 1 cut(s) 515
BspCNI CTCAG 2 cut(s) 454, 528
BspLI GGNNCC 4 cut(s) 191, 192, 383, 470
BspT107I GGYRCC 1 cut(s) 381
BssECI CCNNGG 2 cut(s) 185, 207
BssMI GATC 1 cut(s) 249
BssT1I CCWWGG 1 cut(s) 207
Bst2UI CCWGG 1 cut(s) 52
Bst4CI ACNGT 1 cut(s) 414
Bst6I CTCTTC 1 cut(s) 279
BstC8I GCNNGC 1 cut(s) 214
BstDEI CTNAG 4 cut(s) 68, 462, 536, 589
BstDSI CCRYGG 1 cut(s) 207
BstENI CCTNNNNNAGG 1 cut(s) 49
BstF5I GGATG 1 cut(s) 501
BstHHI GCGC 1 cut(s) 50
BstKTI GATC 1 cut(s) 252
BstMBI GATC 1 cut(s) 249
BstMCI CGRYCG 1 cut(s) 202
BstMWI GCNNNNNNNGC 2 cut(s) 45, 272
BstNI CCWGG 1 cut(s) 52
BstSCI CCNGG 1 cut(s) 50
BstSFI CTRYAG 1 cut(s) 300
BstV1I GCAGC 2 cut(s) 349, 605
BstV2I GAAGAC 1 cut(s) 164
BsuRI GGCC 1 cut(s) 515
BtgI CCRYGG 1 cut(s) 207
BtsCI GGATG 1 cut(s) 501
BtsIMutI CAGTG 3 cut(s) 65, 419, 533
Cac8I GCNNGC 1 cut(s) 214
CfoI GCGC 1 cut(s) 50
Cfr13I GGNCC 1 cut(s) 190
Csp6I GTAC 1 cut(s) 382
CviAII CATG 5 cut(s) 162, 208, 445, 482, 606
CviQI GTAC 1 cut(s) 382
DdeI CTNAG 4 cut(s) 68, 462, 536, 589
DpnI GATC 1 cut(s) 251
DpnII GATC 1 cut(s) 249
EaeI YGGCCR 1 cut(s) 513
Eam1104I CTCTTC 1 cut(s) 279
EarI CTCTTC 1 cut(s) 279
Eco130I CCWWGG 1 cut(s) 207
Eco24I GRGCYC 1 cut(s) 67
Eco32I GATATC 1 cut(s) 408
Eco47I GGWCC 1 cut(s) 190
Eco88I CYCGRG 1 cut(s) 186
EcoNI CCTNNNNNAGG 1 cut(s) 49
EcoO109I RGGNCCY 1 cut(s) 190
EcoRII CCWGG 1 cut(s) 50
EcoRV GATATC 1 cut(s) 408
EcoT14I CCWWGG 1 cut(s) 207
EcoT22I ATGCAT 1 cut(s) 530
EcoT38I GRGCYC 1 cut(s) 67
ErhI CCWWGG 1 cut(s) 207
FaeI CATG 5 cut(s) 165, 211, 448, 485, 609
FaqI GGGAC 2 cut(s) 108, 203
FatI CATG 5 cut(s) 161, 207, 444, 481, 605
Fnu4HI GCNGC 2 cut(s) 338, 594
FokI GGATG 1 cut(s) 488
FriOI GRGCYC 1 cut(s) 67
Fsp4HI GCNGC 2 cut(s) 338, 594
FspBI CTAG 2 cut(s) 314, 323
GlaI GCGC 1 cut(s) 49
GluI GCNGC 2 cut(s) 338, 594
HaeIII GGCC 1 cut(s) 515
HapII CCGG 1 cut(s) 512
HhaI GCGC 1 cut(s) 50
Hin1II CATG 5 cut(s) 165, 211, 448, 485, 609
Hin6I GCGC 1 cut(s) 48
HinP1I GCGC 1 cut(s) 48
HindIII AAGCTT 2 cut(s) 37, 545
HinfI GANTC 3 cut(s) 55, 121, 305
HpaII CCGG 1 cut(s) 512
Hpy166II GTNNAC 1 cut(s) 151
Hpy188I TCNGA 1 cut(s) 495
Hpy188III TCNNGA 2 cut(s) 188, 332
Hpy8I GTNNAC 1 cut(s) 151
Hpy99I CGWCG 1 cut(s) 585
HpyAV CCTTC 7 cut(s) 140, 160, 235, 272, 283, 289, 341
HpyCH4III ACNGT 1 cut(s) 414
HpyCH4IV ACGT 1 cut(s) 583
HpyCH4V TGCA 2 cut(s) 311, 528
HpyF10VI GCNNNNNNNGC 2 cut(s) 45, 272
HpyF3I CTNAG 4 cut(s) 68, 462, 536, 589
HpySE526I ACGT 1 cut(s) 583
Hsp92II CATG 5 cut(s) 165, 211, 448, 485, 609
HspAI GCGC 1 cut(s) 48
KflI GGGWCCC 1 cut(s) 190
KpnI GGTACC 1 cut(s) 385
Kzo9I GATC 1 cut(s) 249
LmnI GCTCC 2 cut(s) 263, 514
LpnPI CCDG 6 cut(s) 37, 58, 64, 159, 525, 584
Lsp1109I GCAGC 2 cut(s) 349, 605
MaeI CTAG 2 cut(s) 314, 323
MaeII ACGT 1 cut(s) 583
MalI GATC 1 cut(s) 251
MboI GATC 1 cut(s) 249
MboII GAAGA 6 cut(s) 113, 116, 169, 296, 364, 443
MhlI GDGCHC 1 cut(s) 67
MluCI AATT 1 cut(s) 227
MlyI GAGTC 2 cut(s) 130, 314
MmeI TCCRAC 2 cut(s) 383, 418
MnlI CCTC 4 cut(s) 137, 195, 434, 459
Mph1103I ATGCAT 1 cut(s) 530
MroXI GAANNNNTTC 1 cut(s) 528
MseI TTAA 1 cut(s) 15
MspI CCGG 1 cut(s) 512
MspR9I CCNGG 1 cut(s) 52
Mva1269I GAATGC 2 cut(s) 528, 530
MvaI CCWGG 1 cut(s) 52
MwoI GCNNNNNNNGC 2 cut(s) 45, 272
NcoI CCATGG 1 cut(s) 207
NdeII GATC 1 cut(s) 249
NlaIII CATG 5 cut(s) 165, 211, 448, 485, 609
NlaIV GGNNCC 4 cut(s) 191, 192, 383, 470
NsiI ATGCAT 1 cut(s) 530
PctI GAATGC 2 cut(s) 528, 530
PdmI GAANNNNTTC 1 cut(s) 528
PfeI GAWTC 1 cut(s) 55
PkrI GCNGC 2 cut(s) 339, 595
PleI GAGTC 2 cut(s) 129, 313
PpsI GAGTC 2 cut(s) 129, 313
PpuMI RGGWCCY 1 cut(s) 190
Psp5II RGGWCCY 1 cut(s) 190
Psp6I CCWGG 1 cut(s) 50
PspGI CCWGG 1 cut(s) 50
PspN4I GGNNCC 4 cut(s) 191, 192, 383, 470
PspPI GGNCC 1 cut(s) 190
PspPPI RGGWCCY 1 cut(s) 190
RsaI GTAC 1 cut(s) 383
RsaNI GTAC 1 cut(s) 382
SaqAI TTAA 1 cut(s) 15
SatI GCNGC 2 cut(s) 338, 594
Sau3AI GATC 1 cut(s) 249
Sau96I GGNCC 1 cut(s) 190
SchI GAGTC 2 cut(s) 130, 314
ScrFI CCNGG 1 cut(s) 52
SduI GDGCHC 1 cut(s) 67
SfcI CTRYAG 1 cut(s) 300
SinI GGWCC 1 cut(s) 190
SmlI CTYRAG 3 cut(s) 74, 134, 332
SmoI CTYRAG 3 cut(s) 74, 134, 332
Sse9I AATT 1 cut(s) 227
SspI AATATT 1 cut(s) 557
SspMI CTAG 2 cut(s) 314, 323
StyD4I CCNGG 1 cut(s) 50
StyI CCWWGG 1 cut(s) 207
TaaI ACNGT 1 cut(s) 414
TaiI ACGT 1 cut(s) 586
TaqII GACCGA 1 cut(s) 216
TasI AATT 1 cut(s) 227
TfiI GAWTC 1 cut(s) 55
Tru1I TTAA 1 cut(s) 15
Tru9I TTAA 1 cut(s) 15
TscAI CASTG 3 cut(s) 65, 419, 540
TseI GCWGC 2 cut(s) 337, 593
TspDTI ATGAA 4 cut(s) 85, 461, 490, 498
TspRI CASTG 3 cut(s) 65, 419, 540
VpaK11BI GGWCC 1 cut(s) 190
XagI CCTNNNNNAGG 1 cut(s) 49
XapI RAATTY 1 cut(s) 227
XmnI GAANNNNTTC 1 cut(s) 528
XspI CTAG 2 cut(s) 314, 323
Zsp2I ATGCAT 1 cut(s) 530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.