Rh6CG291800

Glutathione transferase GST 23-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
46921071 .. 46922243
1173 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG291800.1

Sequence Viewer

Length: 387 bp
ATGGACTTATGGCATGGATATATGTTTAAGCCGGACCTTTACGGATTCTTTAAAAGAGCTGGAGAAGAGCAAATAAAAGCAGCAAAAGAAGCCCAGGAGTGTCTGAAGATCCTAGAAGAGCATGGCCTTCAGGAGAAGAAGTTCTTTGATGGTGACAAGATTGGAATGACAGACTTATCCATGGGATGGCTAGCATTCTGGTTTGAGGCCATGGAAGAAGCAGCTGGTGTACAAGTTCTGGAAGCCAATAGCTTCCCTCGCTTGCACGCATGGATTAGAAATTTCAAGGAAGTTCCTGTGGTTAAAGAAAATCATCCTGACCAAACTCGGCTGTTAGCCTATTTCAAATGGCTAAGGGAGATGTATAACAAGCCAGCAACTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

128

Amino Acids

15.11

Weight (kDa)

5.81

Isoelectric Point (pI)

39.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7962 PF25907 26 - 98 9.6e-07 Domain of unknown function (DUF7962)
GST_C_2 PF13410 27 - 93 5.6e-08 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 186
AclWI GGATC 1 cut(s) 103
AcsI RAATTY 1 cut(s) 280
AcuI CTGAAG 2 cut(s) 113, 125
AfaI GTAC 1 cut(s) 231
AfiI CCNNNNNNNGG 1 cut(s) 186
AgsI TTSAA 2 cut(s) 286, 346
AjnI CCWGG 1 cut(s) 93
AloI GAACNNNNNNTCC 2 cut(s) 125, 157
AluBI AGCT 3 cut(s) 59, 224, 252
AluI AGCT 3 cut(s) 59, 224, 252
AlwI GGATC 1 cut(s) 103
AoxI GGCC 2 cut(s) 124, 207
ApeKI GCWGC 2 cut(s) 80, 221
ApoI RAATTY 1 cut(s) 280
Asp700I GAANNNNTTC 1 cut(s) 140
AspS9I GGNCC 1 cut(s) 34
AsuHPI GGTGA 1 cut(s) 164
AsuNHI GCTAGC 1 cut(s) 190
AvaII GGWCC 1 cut(s) 34
BbvI GCAGC 2 cut(s) 92, 233
BccI CCATC 2 cut(s) 143, 180
BciT130I CCWGG 1 cut(s) 95
BfaI CTAG 2 cut(s) 113, 191
BisI GCNGC 2 cut(s) 81, 222
BlsI GCNGC 2 cut(s) 82, 223
Bme1390I CCNGG 1 cut(s) 95
Bme18I GGWCC 1 cut(s) 34
BmgT120I GGNCC 1 cut(s) 34
BmrFI CCNGG 1 cut(s) 95
BmtI GCTAGC 1 cut(s) 194
BpmI CTGGAG 1 cut(s) 81
Bpu10I CCTNAGC 1 cut(s) 353
BsaJI CCNNGG 3 cut(s) 93, 180, 210
BsaXI ACNNNNNCTCC 2 cut(s) 125, 155
Bsc4I CCNNNNNNNGG 1 cut(s) 186
BseBI CCWGG 1 cut(s) 95
BseDI CCNNGG 3 cut(s) 93, 180, 210
BseGI GGATG 2 cut(s) 191, 313
BseLI CCNNNNNNNGG 1 cut(s) 186
BseXI GCAGC 2 cut(s) 92, 233
BshFI GGCC 2 cut(s) 126, 209
BsiSI CCGG 1 cut(s) 32
BslI CCNNNNNNNGG 1 cut(s) 186
BsmI GAATGC 1 cut(s) 194
BsnI GGCC 2 cut(s) 126, 209
Bsp1407I TGTACA 1 cut(s) 229
Bsp143I GATC 1 cut(s) 108
Bsp19I CCATGG 2 cut(s) 180, 210
BspANI GGCC 2 cut(s) 126, 209
BspOI GCTAGC 1 cut(s) 194
BspPI GGATC 1 cut(s) 103
BspQI GCTCTTC 2 cut(s) 60, 111
BsrGI TGTACA 1 cut(s) 229
BssECI CCNNGG 3 cut(s) 93, 180, 210
BssMI GATC 1 cut(s) 108
BssT1I CCWWGG 2 cut(s) 180, 210
Bst2UI CCWGG 1 cut(s) 95
Bst6I CTCTTC 2 cut(s) 60, 111
BstAUI TGTACA 1 cut(s) 229
BstC8I GCNNGC 4 cut(s) 192, 263, 267, 375
BstDEI CTNAG 1 cut(s) 353
BstDSI CCRYGG 2 cut(s) 180, 210
BstF5I GGATG 2 cut(s) 191, 313
BstKTI GATC 1 cut(s) 111
BstMBI GATC 1 cut(s) 108
BstMWI GCNNNNNNNGC 2 cut(s) 89, 258
BstNI CCWGG 1 cut(s) 95
BstSCI CCNGG 1 cut(s) 93
BstV1I GCAGC 2 cut(s) 92, 233
BstX2I RGATCY 1 cut(s) 108
BstYI RGATCY 1 cut(s) 108
BsuRI GGCC 2 cut(s) 126, 209
BtgI CCRYGG 2 cut(s) 180, 210
BtsCI GGATG 2 cut(s) 191, 313
Cac8I GCNNGC 4 cut(s) 192, 263, 267, 375
Cfr13I GGNCC 1 cut(s) 34
Csp6I GTAC 1 cut(s) 230
CviAII CATG 5 cut(s) 14, 122, 181, 211, 270
CviQI GTAC 1 cut(s) 230
DdeI CTNAG 1 cut(s) 353
DpnI GATC 1 cut(s) 110
DpnII GATC 1 cut(s) 108
DraI TTTAAA 1 cut(s) 52
Eam1104I CTCTTC 2 cut(s) 60, 111
EarI CTCTTC 2 cut(s) 60, 111
Eco130I CCWWGG 2 cut(s) 180, 210
Eco47I GGWCC 1 cut(s) 34
Eco57I CTGAAG 2 cut(s) 113, 125
EcoRII CCWGG 1 cut(s) 93
EcoT14I CCWWGG 2 cut(s) 180, 210
ErhI CCWWGG 2 cut(s) 180, 210
FaeI CATG 5 cut(s) 17, 125, 184, 214, 273
FaiI YATR 9 cut(s) 10, 15, 21, 23, 123, 182, 212, 271, 366
FalI AAGNNNNNCTT 2 cut(s) 128, 160
FatI CATG 5 cut(s) 13, 121, 180, 210, 269
Fnu4HI GCNGC 2 cut(s) 81, 222
FokI GGATG 2 cut(s) 198, 300
Fsp4HI GCNGC 2 cut(s) 81, 222
FspBI CTAG 2 cut(s) 113, 191
GluI GCNGC 2 cut(s) 81, 222
GsuI CTGGAG 1 cut(s) 81
HaeIII GGCC 2 cut(s) 126, 209
HapII CCGG 1 cut(s) 32
Hin1II CATG 5 cut(s) 17, 125, 184, 214, 273
HinfI GANTC 1 cut(s) 45
HpaII CCGG 1 cut(s) 32
HphI GGTGA 1 cut(s) 164
Hpy166II GTNNAC 1 cut(s) 230
Hpy188I TCNGA 1 cut(s) 105
Hpy188III TCNNGA 3 cut(s) 131, 239, 317
Hpy8I GTNNAC 1 cut(s) 230
HpyAV CCTTC 1 cut(s) 137
HpyCH4V TGCA 1 cut(s) 265
HpyF10VI GCNNNNNNNGC 2 cut(s) 89, 258
HpyF3I CTNAG 1 cut(s) 353
Hsp92II CATG 5 cut(s) 17, 125, 184, 214, 273
Kzo9I GATC 1 cut(s) 108
LguI GCTCTTC 2 cut(s) 60, 111
Lsp1109I GCAGC 2 cut(s) 92, 233
MaeI CTAG 2 cut(s) 113, 191
MaeIII GTNAC 1 cut(s) 152
MalI GATC 1 cut(s) 110
MboI GATC 1 cut(s) 108
MboII GAAGA 5 cut(s) 77, 118, 128, 148, 227
MflI RGATCY 1 cut(s) 108
MluCI AATT 1 cut(s) 280
MnlI CCTC 2 cut(s) 199, 267
MroXI GAANNNNTTC 1 cut(s) 140
MseI TTAA 3 cut(s) 27, 51, 303
MspA1I CMGCKG 1 cut(s) 224
MspI CCGG 1 cut(s) 32
MspR9I CCNGG 1 cut(s) 95
Mva1269I GAATGC 1 cut(s) 194
MvaI CCWGG 1 cut(s) 95
MwoI GCNNNNNNNGC 2 cut(s) 89, 258
NcoI CCATGG 2 cut(s) 180, 210
NdeII GATC 1 cut(s) 108
NheI GCTAGC 1 cut(s) 190
NlaIII CATG 5 cut(s) 17, 125, 184, 214, 273
NmeAIII GCCGAG 1 cut(s) 307
NmuCI GTSAC 1 cut(s) 152
PciSI GCTCTTC 2 cut(s) 60, 111
PctI GAATGC 1 cut(s) 194
PdmI GAANNNNTTC 1 cut(s) 140
PfeI GAWTC 1 cut(s) 45
PflMI CCANNNNNTGG 1 cut(s) 186
PkrI GCNGC 2 cut(s) 82, 223
Psp6I CCWGG 1 cut(s) 93
PspGI CCWGG 1 cut(s) 93
PspPI GGNCC 1 cut(s) 34
PsuI RGATCY 1 cut(s) 108
PvuII CAGCTG 1 cut(s) 224
RsaI GTAC 1 cut(s) 231
RsaNI GTAC 1 cut(s) 230
SapI GCTCTTC 2 cut(s) 60, 111
SaqAI TTAA 3 cut(s) 27, 51, 303
SatI GCNGC 2 cut(s) 81, 222
Sau3AI GATC 1 cut(s) 108
Sau96I GGNCC 1 cut(s) 34
ScrFI CCNGG 1 cut(s) 95
SetI ASST 4 cut(s) 39, 61, 226, 254
SinI GGWCC 1 cut(s) 34
Sse9I AATT 1 cut(s) 280
SspMI CTAG 2 cut(s) 113, 191
StyD4I CCNGG 1 cut(s) 93
StyI CCWWGG 2 cut(s) 180, 210
TasI AATT 1 cut(s) 280
TatI WGTACW 1 cut(s) 229
TfiI GAWTC 1 cut(s) 45
Tru1I TTAA 3 cut(s) 27, 51, 303
Tru9I TTAA 3 cut(s) 27, 51, 303
TseFI GTSAC 1 cut(s) 152
TseI GCWGC 2 cut(s) 80, 221
Tsp45I GTSAC 1 cut(s) 152
TspGWI ACGGA 1 cut(s) 57
Van91I CCANNNNNTGG 1 cut(s) 186
VpaK11BI GGWCC 1 cut(s) 34
XapI RAATTY 1 cut(s) 280
XmnI GAANNNNTTC 1 cut(s) 140
XspI CTAG 2 cut(s) 113, 191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.