RLG00000009545
ERF Family

Belongs to the GST superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
54297253 .. 54298214
962 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009545

Sequence Viewer

Length: 594 bp
ATGGACGAAGTGAAGCTACTGGGATTCTGGCCAAGCTCCTTCGTTTACAGATACAACCCAGTCCGCAAGAATGTCCCGGTGCTTGTCCATGGCGGCAAATCAATTGCTGAGTCCCTTGTCATCCTCGAATACAGTGAAGAAACTTGGCCACAAAATCCCTTGCTTCCAAAAGATCCTCATGAAAAAGCCTTGGCTCGTTTTTGGATGCAATTTGGTGTAGATAAGATAAGGCCCGCTATCTTTGCATATTTCAGAGCTATCGGAGAAGAAGCCGAAAAGGCAAAAGAGTTCCAAGAAGTCCTGAAAATCGTGGAAGAACAAGGCCTTGGAGACCAGAAATTTTTTGGTGGTGACAATGCTATAGGTTTGGTGGACATTGCATTTGGAATGCTAGCTTACTGGCTTGAGTGCGTTCAAGAAGCCGTAGGAGTGAAGGTTTTAGAGACCAGCAGTTTGCCTCGCTTGCACGCATGGGCTCAGAATTTCAAGCAAGTGCCTGTGGTGAAGGACAACCTTCCCGATCGTGGAAAACTGCTTGCTCATTACAAACATTCAAGAGAGAAATTGATATTGGCTGCAAGGTCTAGTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

198

Amino Acids

22.41

Weight (kDa)

6.98

Isoelectric Point (pI)

32.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 16 - 44 1.4e-06 Glutathione S-transferase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 64, 93, 234
AclWI GGATC 1 cut(s) 167
AcoI YGGCCR 2 cut(s) 29, 146
AcsI RAATTY 2 cut(s) 338, 481
AfiI CCNNNNNNNGG 1 cut(s) 524
AgsI TTSAA 3 cut(s) 416, 487, 555
AjuI GAANNNNNNNTTGG 4 cut(s) 309, 341, 554, 586
AluBI AGCT 4 cut(s) 16, 36, 257, 395
AluI AGCT 4 cut(s) 16, 36, 257, 395
Alw26I GTCTC 2 cut(s) 324, 437
AlwI GGATC 1 cut(s) 167
AoxI GGCC 4 cut(s) 29, 146, 230, 322
ApeKI GCWGC 1 cut(s) 575
ApoI RAATTY 2 cut(s) 338, 481
ArsI GACNNNNNNTTYG 4 cut(s) 365, 397, 436, 468
AspS9I GGNCC 1 cut(s) 231
AsuC2I CCSGG 1 cut(s) 77
AsuHPI GGTGA 2 cut(s) 362, 514
AsuNHI GCTAGC 1 cut(s) 391
BalI TGGCCA 2 cut(s) 31, 148
BanII GRGCYC 1 cut(s) 478
BarI GAAGNNNNNNTAC 1 cut(s) 32
BbvI GCAGC 1 cut(s) 562
BceAI ACGGC 1 cut(s) 407
BcnI CCSGG 1 cut(s) 77
BcoDI GTCTC 2 cut(s) 324, 437
BfaI CTAG 2 cut(s) 392, 585
BfmI CTRYAG 1 cut(s) 360
BglI GCCNNNNNGGC 1 cut(s) 278
BisI GCNGC 2 cut(s) 94, 576
BlsI GCNGC 2 cut(s) 95, 577
Bme1390I CCNGG 1 cut(s) 77
BmgT120I GGNCC 1 cut(s) 231
BmrFI CCNGG 1 cut(s) 77
BmrI ACTGGG 2 cut(s) 29, 53
BmsI GCATC 1 cut(s) 195
BmtI GCTAGC 1 cut(s) 395
BmuI ACTGGG 2 cut(s) 29, 53
BpuEI CTTGAG 1 cut(s) 425
BpuMI CCSGG 1 cut(s) 77
BsaI GGTCTC 2 cut(s) 324, 437
BsaJI CCNNGG 3 cut(s) 88, 189, 325
BsaXI ACNNNNNCTCC 2 cut(s) 420, 450
Bsc4I CCNNNNNNNGG 1 cut(s) 524
Bse1I ACTGG 3 cut(s) 24, 59, 404
Bse3DI GCAATG 1 cut(s) 375
BseDI CCNNGG 3 cut(s) 88, 189, 325
BseGI GGATG 2 cut(s) 120, 210
BseLI CCNNNNNNNGG 1 cut(s) 524
BseMI GCAATG 1 cut(s) 375
BseMII CTCAG 2 cut(s) 99, 491
BseNI ACTGG 3 cut(s) 24, 59, 404
BseXI GCAGC 1 cut(s) 562
Bsh1285I CGRYCG 1 cut(s) 523
BshFI GGCC 4 cut(s) 31, 148, 232, 324
BsiEI CGRYCG 1 cut(s) 523
BsiSI CCGG 1 cut(s) 77
BslFI GGGAC 2 cut(s) 59, 97
BslI CCNNNNNNNGG 1 cut(s) 524
BsmAI GTCTC 2 cut(s) 324, 437
BsmFI GGGAC 2 cut(s) 59, 97
BsmI GAATGC 1 cut(s) 393
BsnI GGCC 4 cut(s) 31, 148, 232, 324
Bso31I GGTCTC 2 cut(s) 324, 437
Bsp1286I GDGCHC 1 cut(s) 478
Bsp143I GATC 2 cut(s) 172, 520
Bsp19I CCATGG 1 cut(s) 88
BspACI CCGC 3 cut(s) 64, 93, 234
BspANI GGCC 4 cut(s) 31, 148, 232, 324
BspCNI CTCAG 2 cut(s) 100, 490
BspHI TCATGA 1 cut(s) 178
BspOI GCTAGC 1 cut(s) 395
BspPI GGATC 1 cut(s) 167
BspTNI GGTCTC 2 cut(s) 324, 437
BsrDI GCAATG 1 cut(s) 375
BsrI ACTGG 3 cut(s) 24, 59, 404
BssECI CCNNGG 3 cut(s) 88, 189, 325
BssMI GATC 2 cut(s) 172, 520
BssT1I CCWWGG 3 cut(s) 88, 189, 325
Bst4CI ACNGT 1 cut(s) 134
BstC8I GCNNGC 5 cut(s) 234, 393, 464, 468, 537
BstDEI CTNAG 2 cut(s) 108, 477
BstDSI CCRYGG 1 cut(s) 88
BstF5I GGATG 2 cut(s) 120, 210
BstKTI GATC 2 cut(s) 175, 523
BstMAI GTCTC 2 cut(s) 324, 437
BstMBI GATC 2 cut(s) 172, 520
BstMCI CGRYCG 1 cut(s) 523
BstMWI GCNNNNNNNGC 3 cut(s) 242, 278, 463
BstSCI CCNGG 1 cut(s) 75
BstSFI CTRYAG 1 cut(s) 360
BstV1I GCAGC 1 cut(s) 562
BstX2I RGATCY 1 cut(s) 172
BstYI RGATCY 1 cut(s) 172
BsuRI GGCC 4 cut(s) 31, 148, 232, 324
BtgI CCRYGG 1 cut(s) 88
BtsCI GGATG 2 cut(s) 120, 210
BtsIMutI CAGTG 1 cut(s) 139
Cac8I GCNNGC 5 cut(s) 234, 393, 464, 468, 537
CciI TCATGA 1 cut(s) 178
Cfr13I GGNCC 1 cut(s) 231
CviAII CATG 3 cut(s) 89, 179, 471
DdeI CTNAG 2 cut(s) 108, 477
DpnI GATC 2 cut(s) 174, 522
DpnII GATC 2 cut(s) 172, 520
EaeI YGGCCR 2 cut(s) 29, 146
Eco130I CCWWGG 3 cut(s) 88, 189, 325
Eco147I AGGCCT 1 cut(s) 324
Eco24I GRGCYC 1 cut(s) 478
Eco31I GGTCTC 2 cut(s) 324, 437
EcoT14I CCWWGG 3 cut(s) 88, 189, 325
EcoT38I GRGCYC 1 cut(s) 478
ErhI CCWWGG 3 cut(s) 88, 189, 325
FaeI CATG 3 cut(s) 92, 182, 474
FaiI YATR 5 cut(s) 90, 180, 247, 362, 472
FaqI GGGAC 2 cut(s) 59, 97
FatI CATG 3 cut(s) 88, 178, 470
FauI CCCGC 1 cut(s) 241
Fnu4HI GCNGC 2 cut(s) 94, 576
FokI GGATG 2 cut(s) 107, 217
FriOI GRGCYC 1 cut(s) 478
Fsp4HI GCNGC 2 cut(s) 94, 576
FspBI CTAG 2 cut(s) 392, 585
GluI GCNGC 2 cut(s) 94, 576
HaeIII GGCC 4 cut(s) 31, 148, 232, 324
HapII CCGG 1 cut(s) 77
Hin1II CATG 3 cut(s) 92, 182, 474
HinfI GANTC 2 cut(s) 24, 110
HpaII CCGG 1 cut(s) 77
HphI GGTGA 2 cut(s) 362, 514
Hpy166II GTNNAC 2 cut(s) 46, 373
Hpy188I TCNGA 3 cut(s) 254, 263, 480
Hpy188III TCNNGA 5 cut(s) 179, 301, 416, 518, 555
Hpy8I GTNNAC 2 cut(s) 46, 373
HpyAV CCTTC 4 cut(s) 49, 427, 499, 524
HpyCH4III ACNGT 1 cut(s) 134
HpyCH4V TGCA 5 cut(s) 208, 245, 380, 466, 578
HpyF10VI GCNNNNNNNGC 3 cut(s) 242, 278, 463
HpyF3I CTNAG 2 cut(s) 108, 477
Hsp92II CATG 3 cut(s) 92, 182, 474
Kzo9I GATC 2 cut(s) 172, 520
LmnI GCTCC 1 cut(s) 41
LpnPI CCDG 9 cut(s) 5, 13, 72, 90, 314, 347, 385, 460, 510
Lsp1109I GCAGC 1 cut(s) 562
LweI GCATC 1 cut(s) 195
MaeI CTAG 2 cut(s) 392, 585
MaeIII GTNAC 1 cut(s) 350
MalI GATC 2 cut(s) 174, 522
MboI GATC 2 cut(s) 172, 520
MboII GAAGA 3 cut(s) 149, 278, 326
MfeI CAATTG 1 cut(s) 102
MflI RGATCY 1 cut(s) 172
MhlI GDGCHC 1 cut(s) 478
MlsI TGGCCA 2 cut(s) 31, 148
MluCI AATT 5 cut(s) 102, 209, 338, 481, 563
MluNI TGGCCA 2 cut(s) 31, 148
MlyI GAGTC 1 cut(s) 119
MnlI CCTC 3 cut(s) 134, 186, 468
Mox20I TGGCCA 2 cut(s) 31, 148
MscI TGGCCA 2 cut(s) 31, 148
Msp20I TGGCCA 2 cut(s) 31, 148
MspI CCGG 1 cut(s) 77
MspR9I CCNGG 1 cut(s) 77
MunI CAATTG 1 cut(s) 102
Mva1269I GAATGC 1 cut(s) 393
MwoI GCNNNNNNNGC 3 cut(s) 242, 278, 463
NciI CCSGG 1 cut(s) 77
NcoI CCATGG 1 cut(s) 88
NdeII GATC 2 cut(s) 172, 520
NheI GCTAGC 1 cut(s) 391
NlaIII CATG 3 cut(s) 92, 182, 474
NmuCI GTSAC 1 cut(s) 350
PagI TCATGA 1 cut(s) 178
PceI AGGCCT 1 cut(s) 324
PctI GAATGC 1 cut(s) 393
PfeI GAWTC 1 cut(s) 24
PkrI GCNGC 2 cut(s) 95, 577
Ple19I CGATCG 1 cut(s) 523
PleI GAGTC 1 cut(s) 118
PpsI GAGTC 1 cut(s) 118
PspPI GGNCC 1 cut(s) 231
PsuI RGATCY 1 cut(s) 172
PvuI CGATCG 1 cut(s) 523
SatI GCNGC 2 cut(s) 94, 576
Sau3AI GATC 2 cut(s) 172, 520
Sau96I GGNCC 1 cut(s) 231
SchI GAGTC 1 cut(s) 119
ScrFI CCNGG 1 cut(s) 77
SduI GDGCHC 1 cut(s) 478
SetI ASST 8 cut(s) 18, 38, 259, 367, 397, 438, 516, 584
SfaNI GCATC 1 cut(s) 195
SfcI CTRYAG 1 cut(s) 360
SmlI CTYRAG 1 cut(s) 404
SmoI CTYRAG 1 cut(s) 404
Sse9I AATT 5 cut(s) 102, 209, 338, 481, 563
SseBI AGGCCT 1 cut(s) 324
SsiI CCGC 3 cut(s) 64, 93, 234
SspMI CTAG 2 cut(s) 392, 585
StuI AGGCCT 1 cut(s) 324
StyD4I CCNGG 1 cut(s) 75
StyI CCWWGG 3 cut(s) 88, 189, 325
TaaI ACNGT 1 cut(s) 134
TaqI TCGA 1 cut(s) 126
TasI AATT 5 cut(s) 102, 209, 338, 481, 563
TauI GCSGC 1 cut(s) 96
TfiI GAWTC 1 cut(s) 24
TscAI CASTG 1 cut(s) 139
TseFI GTSAC 1 cut(s) 350
TseI GCWGC 1 cut(s) 575
Tsp45I GTSAC 1 cut(s) 350
TspDTI ATGAA 1 cut(s) 195
TspRI CASTG 1 cut(s) 139
XapI RAATTY 2 cut(s) 338, 481
XcmI CCANNNNNNNNNTGG 1 cut(s) 341
XspI CTAG 2 cut(s) 392, 585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.