RchiOBHm_Chr1g0339771
ERF Family

Belongs to the GST superfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
31191069 .. 31191907
839 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56664

Sequence Viewer

Length: 672 bp
ATGGCAGAAGTCAAGCTCTTCAGAACATGGTCAAGCCCTTTTGCTTTGAGAATAGTCTGGGCACTGAAGCTCAAAGATGTCCAATATGATACCATCTTTGAAGATCTCTCAAACAAAAGCCCTTTGCTTCTTCAATACAACCCTGTTCATAAGAAGGTTCCAGTGCTTGTGCACAATGGAAAATCAGTTGCTGAATCATTTGTGATCCTTGAATACATTGAAGAAACATGGAAACAGAACCCTTTGCTATCCGAAGATCCTCACGAAAGAGCTGCTGCACGCTGTTGGGCAAAATTTGGTGATGAAAAGGTTTTGCCATCTATTTGGGAAGCCTTTAAAAGTGAGGGGAAAGAGCAAGAGGAAGGTATTGTGAAGGCCAAGGAGAACTTGAAGTACTTGGAAGAGGAGCTAAAGGGGAAGAAATTCTTTGGGGGAGAGCATATTGGCTTTGCAGATATTGCACTTGGATGGCTTGCAGAATATGAGAATGTATTTGAAGAGGTAACTAGCATGAGGGTGATAGCAGAAGAAGAGTTTCCATTGTTATCAGAATGGAAAAGGACTTTTTCAGATGCTCCTATAATCAAAGAGAATTGGCCTCCCAGAGACAAACTTGTCACCAAATTTCAGGCTCTCCGAGAGGCCAACCTCTTGAAAAAGGTACCTAAATGA

Protein Analysis

223

Amino Acids

25.91

Weight (kDa)

5.75

Isoelectric Point (pI)

41.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 3 - 75 3.5e-20 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 6 - 78 5.5e-11 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 12 - 76 8e-15 Glutathione S-transferase, N-terminal domain
GST_C PF00043 107 - 191 1.2e-10 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 614
Acc65I GGTACC 1 cut(s) 661
AccB1I GGYRCC 1 cut(s) 661
AclWI GGATC 2 cut(s) 199, 251
AcsI RAATTY 3 cut(s) 293, 422, 623
AcuI CTGAAG 2 cut(s) 4, 86
AfaI GTAC 2 cut(s) 395, 663
AgsI TTSAA 7 cut(s) 101, 134, 212, 221, 391, 497, 655
AluBI AGCT 4 cut(s) 16, 70, 272, 409
AluI AGCT 4 cut(s) 16, 70, 272, 409
Alw21I GWGCWC 1 cut(s) 174
Alw26I GTCTC 1 cut(s) 600
Alw44I GTGCAC 1 cut(s) 170
AlwI GGATC 2 cut(s) 199, 251
AlwNI CAGNNNCTG 1 cut(s) 191
AoxI GGCC 3 cut(s) 375, 596, 642
ApaLI GTGCAC 1 cut(s) 170
ApeKI GCWGC 2 cut(s) 272, 275
ApoI RAATTY 3 cut(s) 293, 422, 623
Asp700I GAANNNNTTC 2 cut(s) 422, 534
Asp718I GGTACC 1 cut(s) 661
AsuHPI GGTGA 3 cut(s) 311, 529, 610
BaeGI GKGCMC 2 cut(s) 64, 174
BanI GGYRCC 1 cut(s) 661
Bbv12I GWGCWC 1 cut(s) 174
BbvI GCAGC 2 cut(s) 259, 262
BccI CCATC 3 cut(s) 101, 325, 462
BcgI CGANNNNNNTGC 2 cut(s) 254, 288
BcoDI GTCTC 1 cut(s) 600
BfaI CTAG 1 cut(s) 507
BglII AGATCT 1 cut(s) 103
BisI GCNGC 2 cut(s) 273, 276
BlsI GCNGC 2 cut(s) 274, 277
BmcAI AGTACT 1 cut(s) 395
BmiI GGNNCC 2 cut(s) 159, 663
BmsI GCATC 1 cut(s) 562
BsaJI CCNNGG 1 cut(s) 378
Bse1I ACTGG 1 cut(s) 161
BseDI CCNNGG 1 cut(s) 378
BseGI GGATG 1 cut(s) 473
BseNI ACTGG 1 cut(s) 161
BseRI GAGGAG 1 cut(s) 419
BseSI GKGCMC 2 cut(s) 64, 174
BseXI GCAGC 2 cut(s) 259, 262
BsgI GTGCAG 1 cut(s) 261
BshFI GGCC 3 cut(s) 377, 598, 644
BshNI GGYRCC 1 cut(s) 661
BsiHKAI GWGCWC 1 cut(s) 174
BsmAI GTCTC 1 cut(s) 600
BsnI GGCC 3 cut(s) 377, 598, 644
Bsp1286I GDGCHC 2 cut(s) 64, 174
Bsp143I GATC 3 cut(s) 103, 204, 256
BspANI GGCC 3 cut(s) 377, 598, 644
BspLI GGNNCC 2 cut(s) 159, 663
BspPI GGATC 2 cut(s) 199, 251
BspQI GCTCTTC 1 cut(s) 23
BspT107I GGYRCC 1 cut(s) 661
BsrI ACTGG 1 cut(s) 161
BssECI CCNNGG 1 cut(s) 378
BssMI GATC 3 cut(s) 103, 204, 256
BssT1I CCWWGG 1 cut(s) 378
Bst6I CTCTTC 4 cut(s) 23, 396, 492, 525
BstAPI GCANNNNNTGC 1 cut(s) 458
BstC8I GCNNGC 2 cut(s) 280, 474
BstF5I GGATG 1 cut(s) 473
BstKTI GATC 3 cut(s) 106, 207, 259
BstMAI GTCTC 1 cut(s) 600
BstMBI GATC 3 cut(s) 103, 204, 256
BstMWI GCNNNNNNNGC 1 cut(s) 458
BstSLI GKGCMC 2 cut(s) 64, 174
BstV1I GCAGC 2 cut(s) 259, 262
BstX2I RGATCY 2 cut(s) 103, 256
BstXI CCANNNNNNTGG 1 cut(s) 324
BstYI RGATCY 2 cut(s) 103, 256
BsuRI GGCC 3 cut(s) 377, 598, 644
BtsCI GGATG 1 cut(s) 473
BtsIMutI CAGTG 2 cut(s) 62, 168
Cac8I GCNNGC 2 cut(s) 280, 474
CaiI CAGNNNCTG 1 cut(s) 191
Csp6I GTAC 2 cut(s) 394, 662
CviAII CATG 3 cut(s) 27, 228, 511
CviQI GTAC 2 cut(s) 394, 662
DpnI GATC 3 cut(s) 105, 206, 258
DpnII GATC 3 cut(s) 103, 204, 256
DraI TTTAAA 1 cut(s) 337
DrdI GACNNNNNNGTC 1 cut(s) 614
DseDI GACNNNNNNGTC 1 cut(s) 614
Eam1104I CTCTTC 4 cut(s) 23, 396, 492, 525
EarI CTCTTC 4 cut(s) 23, 396, 492, 525
Eco130I CCWWGG 1 cut(s) 378
Eco57I CTGAAG 2 cut(s) 4, 86
EcoT14I CCWWGG 1 cut(s) 378
ErhI CCWWGG 1 cut(s) 378
FaeI CATG 3 cut(s) 30, 231, 514
FaiI YATR 8 cut(s) 28, 87, 150, 229, 441, 483, 512, 581
FalI AAGNNNNNCTT 4 cut(s) 371, 403, 410, 442
FatI CATG 3 cut(s) 26, 227, 510
Fnu4HI GCNGC 2 cut(s) 273, 276
FokI GGATG 1 cut(s) 480
Fsp4HI GCNGC 2 cut(s) 273, 276
FspBI CTAG 1 cut(s) 507
GluI GCNGC 2 cut(s) 273, 276
HaeIII GGCC 3 cut(s) 377, 598, 644
Hin1II CATG 3 cut(s) 30, 231, 514
HinfI GANTC 1 cut(s) 194
HphI GGTGA 3 cut(s) 311, 529, 610
Hpy166II GTNNAC 1 cut(s) 172
Hpy188I TCNGA 5 cut(s) 23, 253, 550, 571, 638
Hpy188III TCNNGA 2 cut(s) 263, 652
Hpy8I GTNNAC 1 cut(s) 172
HpyAV CCTTC 3 cut(s) 148, 356, 367
HpyCH4V TGCA 5 cut(s) 172, 278, 452, 461, 476
HpyF10VI GCNNNNNNNGC 1 cut(s) 458
Hsp92II CATG 3 cut(s) 30, 231, 514
KpnI GGTACC 1 cut(s) 665
Kzo9I GATC 3 cut(s) 103, 204, 256
LguI GCTCTTC 1 cut(s) 23
LmnI GCTCC 2 cut(s) 406, 580
LpnPI CCDG 5 cut(s) 43, 156, 174, 614, 616
Lsp1109I GCAGC 2 cut(s) 259, 262
LweI GCATC 1 cut(s) 562
MaeI CTAG 1 cut(s) 507
MaeIII GTNAC 2 cut(s) 502, 616
MalI GATC 3 cut(s) 105, 206, 258
MboI GATC 3 cut(s) 103, 204, 256
MflI RGATCY 2 cut(s) 103, 256
MhlI GDGCHC 2 cut(s) 64, 174
MluCI AATT 4 cut(s) 293, 422, 592, 623
MnlI CCTC 9 cut(s) 270, 337, 352, 397, 493, 507, 609, 634, 659
MroXI GAANNNNTTC 2 cut(s) 422, 534
MseI TTAA 1 cut(s) 336
MslI CAYNNNNRTG 2 cut(s) 466, 515
MwoI GCNNNNNNNGC 1 cut(s) 458
NdeII GATC 3 cut(s) 103, 204, 256
NlaIII CATG 3 cut(s) 30, 231, 514
NlaIV GGNNCC 2 cut(s) 159, 663
NmuCI GTSAC 1 cut(s) 616
PciSI GCTCTTC 1 cut(s) 23
PdmI GAANNNNTTC 2 cut(s) 422, 534
PfeI GAWTC 1 cut(s) 194
PkrI GCNGC 2 cut(s) 274, 277
PspN4I GGNNCC 2 cut(s) 159, 663
PsrI GAACNNNNNNTAC 2 cut(s) 377, 409
PstNI CAGNNNCTG 1 cut(s) 191
PsuI RGATCY 2 cut(s) 103, 256
RsaI GTAC 2 cut(s) 395, 663
RsaNI GTAC 2 cut(s) 394, 662
RseI CAYNNNNRTG 2 cut(s) 466, 515
SapI GCTCTTC 1 cut(s) 23
SaqAI TTAA 1 cut(s) 336
SatI GCNGC 2 cut(s) 273, 276
Sau3AI GATC 3 cut(s) 103, 204, 256
ScaI AGTACT 1 cut(s) 395
SduI GDGCHC 2 cut(s) 64, 174
SfaNI GCATC 1 cut(s) 562
SmiMI CAYNNNNRTG 2 cut(s) 466, 515
Sse9I AATT 4 cut(s) 293, 422, 592, 623
SspMI CTAG 1 cut(s) 507
StyI CCWWGG 1 cut(s) 378
TasI AATT 4 cut(s) 293, 422, 592, 623
TatI WGTACW 1 cut(s) 393
TfiI GAWTC 1 cut(s) 194
Tru1I TTAA 1 cut(s) 336
Tru9I TTAA 1 cut(s) 336
TscAI CASTG 2 cut(s) 69, 168
TseFI GTSAC 1 cut(s) 616
TseI GCWGC 2 cut(s) 272, 275
Tsp45I GTSAC 1 cut(s) 616
TspDTI ATGAA 2 cut(s) 137, 318
TspRI CASTG 2 cut(s) 69, 168
VneI GTGCAC 1 cut(s) 170
XapI RAATTY 3 cut(s) 293, 422, 623
XmnI GAANNNNTTC 2 cut(s) 422, 534
XspI CTAG 1 cut(s) 507
ZrmI AGTACT 1 cut(s) 395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.