Rmu_sc0000037.1_g000019
ERF Family

Belongs to the GST superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000037.1
Physical Location & Seq
Forward (+)
124030 .. 124789
760 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000037.1_g000019.1.cds

Sequence Viewer

Length: 576 bp
atgtcccatatgataccatatttgaagatcttctcaaacaaaagccctctacttcttcaatacaacctcattcgtaagaaggttccagtgcttgtgcacaatggaaaatcaattgctgaatcttttgtgatccttgaatacattgaggaaacatggaaacaaaatcctttgctgcctgaagatcttcacgatagagcggctgcacggtttgggccaaatttggtgatgacaagtgaagggaaagagcaagaggaagctattgtgaaagcaagggagaacttgaagtacttgcaagaagagctaaagggaaagaaattctttgcgagaaagcaaattggatctgcagatatcgcgctcagatggcttgcacaccatgagcacgtgtttgaagaggtagctagcatgaagctgatagcagaagctgagttcccattgttatcccaatggcaaaagactttatcagatgctcctataatcaaagagaattggcctcctaaggacaaacttgtcactaaatttcaggctacccatgagcatgaacttgtcaagaagttgaagaaaggggcacctaagtga

Protein Analysis

191

Amino Acids

22.09

Weight (kDa)

9.22

Isoelectric Point (pI)

38.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 506
AccB1I GGYRCC 1 cut(s) 565
AccBSI CCGCTC 1 cut(s) 197
AccII CGCG 1 cut(s) 353
AciI CCGC 1 cut(s) 197
AclWI GGATC 2 cut(s) 124, 346
AcsI RAATTY 3 cut(s) 217, 314, 515
AcuI CTGAAG 1 cut(s) 198
AcvI CACGTG 1 cut(s) 382
AfaI GTAC 1 cut(s) 287
AflIII ACRYGT 1 cut(s) 381
AgsI TTSAA 6 cut(s) 25, 59, 137, 283, 389, 556
AleI CACNNNNGTG 1 cut(s) 571
AluBI AGCT 5 cut(s) 257, 301, 398, 409, 422
AluI AGCT 5 cut(s) 257, 301, 398, 409, 422
Alw21I GWGCWC 2 cut(s) 99, 381
Alw44I GTGCAC 1 cut(s) 95
AlwI GGATC 2 cut(s) 124, 346
AlwNI CAGNNNCTG 1 cut(s) 422
AoxI GGCC 2 cut(s) 212, 488
ApaLI GTGCAC 1 cut(s) 95
ApeKI GCWGC 2 cut(s) 172, 200
ApoI RAATTY 3 cut(s) 217, 314, 515
Asp700I GAANNNNTTC 2 cut(s) 29, 183
AspLEI GCGC 1 cut(s) 355
AspS9I GGNCC 1 cut(s) 212
AsuHPI GGTGA 1 cut(s) 235
AsuNHI GCTAGC 1 cut(s) 398
AxyI CCTNAGG 1 cut(s) 495
BaeGI GKGCMC 2 cut(s) 99, 568
BanI GGYRCC 1 cut(s) 565
BbrPI CACGTG 1 cut(s) 382
Bbv12I GWGCWC 2 cut(s) 99, 381
BbvI GCAGC 2 cut(s) 159, 187
BccI CCATC 1 cut(s) 354
BfaI CTAG 1 cut(s) 399
BfmI CTRYAG 1 cut(s) 342
BglII AGATCT 2 cut(s) 27, 181
BisI GCNGC 3 cut(s) 173, 198, 201
BlsI GCNGC 3 cut(s) 174, 199, 202
BmcAI AGTACT 1 cut(s) 287
BmgT120I GGNCC 1 cut(s) 212
BmiI GGNNCC 2 cut(s) 84, 567
BmsI GCATC 1 cut(s) 454
BmtI GCTAGC 1 cut(s) 402
BsaAI YACGTR 1 cut(s) 382
Bse1I ACTGG 1 cut(s) 86
Bse21I CCTNAGG 1 cut(s) 495
BseMII CTCAG 2 cut(s) 370, 414
BseNI ACTGG 1 cut(s) 86
BseSI GKGCMC 2 cut(s) 99, 568
BseXI GCAGC 2 cut(s) 159, 187
BsgI GTGCAG 1 cut(s) 186
Bsh1236I CGCG 1 cut(s) 353
BshFI GGCC 2 cut(s) 214, 490
BshNI GGYRCC 1 cut(s) 565
BsiHKAI GWGCWC 2 cut(s) 99, 381
BsnI GGCC 2 cut(s) 214, 490
Bsp1286I GDGCHC 3 cut(s) 99, 381, 568
Bsp143I GATC 4 cut(s) 27, 129, 181, 338
BspACI CCGC 1 cut(s) 197
BspANI GGCC 2 cut(s) 214, 490
BspCNI CTCAG 2 cut(s) 369, 415
BspFNI CGCG 1 cut(s) 353
BspLI GGNNCC 2 cut(s) 84, 567
BspMAI CTGCAG 1 cut(s) 346
BspOI GCTAGC 1 cut(s) 402
BspPI GGATC 2 cut(s) 124, 346
BspQI GCTCTTC 1 cut(s) 291
BspT107I GGYRCC 1 cut(s) 565
BsrBI CCGCTC 1 cut(s) 197
BsrI ACTGG 1 cut(s) 86
BssMI GATC 4 cut(s) 27, 129, 181, 338
Bst4CI ACNGT 1 cut(s) 207
Bst6I CTCTTC 2 cut(s) 291, 384
BstBAI YACGTR 1 cut(s) 382
BstC8I GCNNGC 2 cut(s) 366, 400
BstDEI CTNAG 4 cut(s) 356, 423, 495, 570
BstFNI CGCG 1 cut(s) 353
BstHHI GCGC 1 cut(s) 355
BstKTI GATC 4 cut(s) 30, 132, 184, 341
BstMBI GATC 4 cut(s) 27, 129, 181, 338
BstMWI GCNNNNNNNGC 3 cut(s) 298, 350, 361
BstSFI CTRYAG 1 cut(s) 342
BstSLI GKGCMC 2 cut(s) 99, 568
BstUI CGCG 1 cut(s) 353
BstV1I GCAGC 2 cut(s) 159, 187
BstX2I RGATCY 3 cut(s) 27, 181, 338
BstYI RGATCY 3 cut(s) 27, 181, 338
Bsu36I CCTNAGG 1 cut(s) 495
BsuRI GGCC 2 cut(s) 214, 490
BtsIMutI CAGTG 1 cut(s) 93
Cac8I GCNNGC 2 cut(s) 366, 400
CaiI CAGNNNCTG 1 cut(s) 422
CfoI GCGC 1 cut(s) 355
Cfr13I GGNCC 1 cut(s) 212
Csp6I GTAC 1 cut(s) 286
CviAII CATG 5 cut(s) 153, 374, 403, 530, 536
CviQI GTAC 1 cut(s) 286
DdeI CTNAG 4 cut(s) 356, 423, 495, 570
DpnI GATC 4 cut(s) 29, 131, 183, 340
DpnII GATC 4 cut(s) 27, 129, 181, 338
DrdI GACNNNNNNGTC 1 cut(s) 506
DseDI GACNNNNNNGTC 1 cut(s) 506
Eam1104I CTCTTC 2 cut(s) 291, 384
EarI CTCTTC 2 cut(s) 291, 384
Eco32I GATATC 1 cut(s) 349
Eco57I CTGAAG 1 cut(s) 198
Eco72I CACGTG 1 cut(s) 382
Eco81I CCTNAGG 1 cut(s) 495
EcoRV GATATC 1 cut(s) 349
FaeI CATG 5 cut(s) 156, 377, 406, 533, 539
FaiI YATR 9 cut(s) 9, 11, 19, 154, 375, 404, 473, 531, 537
FalI AAGNNNNNCTT 2 cut(s) 302, 334
FatI CATG 5 cut(s) 152, 373, 402, 529, 535
FauNDI CATATG 1 cut(s) 9
Fnu4HI GCNGC 3 cut(s) 173, 198, 201
Fsp4HI GCNGC 3 cut(s) 173, 198, 201
FspBI CTAG 1 cut(s) 399
GlaI GCGC 1 cut(s) 354
GluI GCNGC 3 cut(s) 173, 198, 201
HaeIII GGCC 2 cut(s) 214, 490
HhaI GCGC 1 cut(s) 355
Hin1II CATG 5 cut(s) 156, 377, 406, 533, 539
Hin6I GCGC 1 cut(s) 353
HinP1I GCGC 1 cut(s) 353
HinfI GANTC 1 cut(s) 119
HphI GGTGA 1 cut(s) 235
Hpy166II GTNNAC 1 cut(s) 97
Hpy188I TCNGA 2 cut(s) 359, 463
Hpy188III TCNNGA 2 cut(s) 188, 547
Hpy8I GTNNAC 1 cut(s) 97
HpyAV CCTTC 2 cut(s) 73, 230
HpyCH4III ACNGT 1 cut(s) 207
HpyCH4IV ACGT 1 cut(s) 381
HpyCH4V TGCA 5 cut(s) 97, 203, 292, 344, 368
HpyF10VI GCNNNNNNNGC 3 cut(s) 298, 350, 361
HpyF3I CTNAG 4 cut(s) 356, 423, 495, 570
HpySE526I ACGT 1 cut(s) 381
Hsp92II CATG 5 cut(s) 156, 377, 406, 533, 539
HspAI GCGC 1 cut(s) 353
Kzo9I GATC 4 cut(s) 27, 129, 181, 338
LguI GCTCTTC 1 cut(s) 291
LmnI GCTCC 1 cut(s) 472
LpnPI CCDG 3 cut(s) 99, 189, 506
Lsp1109I GCAGC 2 cut(s) 159, 187
LweI GCATC 1 cut(s) 454
MaeI CTAG 1 cut(s) 399
MaeII ACGT 1 cut(s) 381
MaeIII GTNAC 1 cut(s) 508
MalI GATC 4 cut(s) 29, 131, 183, 340
MbiI CCGCTC 1 cut(s) 197
MboI GATC 4 cut(s) 27, 129, 181, 338
MboII GAAGA 8 cut(s) 22, 37, 47, 176, 191, 308, 401, 568
MfeI CAATTG 1 cut(s) 111
MflI RGATCY 3 cut(s) 27, 181, 338
MhlI GDGCHC 3 cut(s) 99, 381, 568
MluCI AATT 6 cut(s) 111, 217, 314, 333, 484, 515
MnlI CCTC 6 cut(s) 57, 77, 139, 244, 385, 501
MroXI GAANNNNTTC 2 cut(s) 29, 183
MslI CAYNNNNRTG 2 cut(s) 534, 571
MunI CAATTG 1 cut(s) 111
MvnI CGCG 1 cut(s) 353
MwoI GCNNNNNNNGC 3 cut(s) 298, 350, 361
NdeI CATATG 1 cut(s) 9
NdeII GATC 4 cut(s) 27, 129, 181, 338
NheI GCTAGC 1 cut(s) 398
NlaIII CATG 5 cut(s) 156, 377, 406, 533, 539
NlaIV GGNNCC 2 cut(s) 84, 567
NmuCI GTSAC 1 cut(s) 508
OliI CACNNNNGTG 1 cut(s) 571
PciSI GCTCTTC 1 cut(s) 291
PdmI GAANNNNTTC 2 cut(s) 29, 183
PfeI GAWTC 1 cut(s) 119
PkrI GCNGC 3 cut(s) 174, 199, 202
PmaCI CACGTG 1 cut(s) 382
PmlI CACGTG 1 cut(s) 382
Ppu21I YACGTR 1 cut(s) 382
PspCI CACGTG 1 cut(s) 382
PspN4I GGNNCC 2 cut(s) 84, 567
PspPI GGNCC 1 cut(s) 212
PsrI GAACNNNNNNTAC 2 cut(s) 269, 301
PstI CTGCAG 1 cut(s) 346
PstNI CAGNNNCTG 1 cut(s) 422
PsuI RGATCY 3 cut(s) 27, 181, 338
RsaI GTAC 1 cut(s) 287
RsaNI GTAC 1 cut(s) 286
RseI CAYNNNNRTG 2 cut(s) 534, 571
SapI GCTCTTC 1 cut(s) 291
SatI GCNGC 3 cut(s) 173, 198, 201
Sau3AI GATC 4 cut(s) 27, 129, 181, 338
Sau96I GGNCC 1 cut(s) 212
ScaI AGTACT 1 cut(s) 287
SduI GDGCHC 3 cut(s) 99, 381, 568
SfaNI GCATC 1 cut(s) 454
SfcI CTRYAG 1 cut(s) 342
SmiMI CAYNNNNRTG 2 cut(s) 534, 571
Sse9I AATT 6 cut(s) 111, 217, 314, 333, 484, 515
SsiI CCGC 1 cut(s) 197
SspMI CTAG 1 cut(s) 399
TaaI ACNGT 1 cut(s) 207
TaiI ACGT 1 cut(s) 384
TasI AATT 6 cut(s) 111, 217, 314, 333, 484, 515
TatI WGTACW 1 cut(s) 285
TauI GCSGC 1 cut(s) 200
TfiI GAWTC 1 cut(s) 119
TscAI CASTG 1 cut(s) 93
TseFI GTSAC 1 cut(s) 508
TseI GCWGC 2 cut(s) 172, 200
Tsp45I GTSAC 1 cut(s) 508
TspDTI ATGAA 2 cut(s) 419, 552
TspRI CASTG 1 cut(s) 93
VneI GTGCAC 1 cut(s) 95
XapI RAATTY 3 cut(s) 217, 314, 515
XmnI GAANNNNTTC 2 cut(s) 29, 183
XspI CTAG 1 cut(s) 399
ZrmI AGTACT 1 cut(s) 287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.