Rroxscaffold_7G00212460
ERF Family

Belongs to the GST superfamily

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
62926352 .. 62927356
1005 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00212460.1

Sequence Viewer

Length: 621 bp
ATGGCAGAAGTCAAGCTGTTTAGGACATGGTCAAGCTTTTTGGCTTTGAGGATAGTTTGGGCACTGAAGCTCAAAGATGTCCCCTATGATACCATCCTTGAAGATCTTTCAAACAAAAGTTCTTTGCTTCTTCAACACAACCCCATTCATAAGAAGGTTCCAGTGACTGTGCACAACGGAAAATCAATTGCTGAATCTCTTGTAATCCTTGAATACATTGAGGAAACATGGGAACAAATCCCTTTGCTGCACGATTTTGGGCCAAATTTGGTGATGACAAGTGAAGGGAAAGAGCAAGAGGAAGCTATTGTGAAAGCAAAGGAGAACTTGAAGTACTTGGAAGGAGAGTTAAAGGGAAAGAAATTCTTTGGGGGAGAGCAAATTGGATTTACAGATATTGCGCTCGGATGGCTTGCACACCATGAGAACGTGTTTGAAGAGGTAGCCAATGTGAAGCTGATAGCAGAAGATGAGTTCCCATTGTTATCAGAATGGCAAAAGACTTTCACACATGTTCCTATGATCAAAGAGAATTGGCCTTCTAGAGACAAACTTGTCACTAAATTTCAGGCTATCCGTGAGCGTGAACTTGTCAAGAAGCTGAAGAAGGCACCTAAATGA

Protein Analysis

206

Amino Acids

23.81

Weight (kDa)

6.4

Isoelectric Point (pI)

31.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 3 - 75 8.9e-17 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 11 - 76 4.4e-09 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 15 - 76 1.2e-10 Glutathione S-transferase, N-terminal domain
GST_C PF00043 91 - 171 1.7e-09 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000081)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G29420
fragaria_vesca FvH4_2g20010 FvH4_2g20020 FvH4_2g20030 FvH4_2g20060 FvH4_2g20070 FvH4_2g20080 FvH4_2g20091 FvH4_2g20110 FvH4_4g05320 FvH4_4g05350 FvH4_4g05360 FvH4_4g12720 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g16920 FvH4_5g36020 FvH4_5g36870 FvH4_7g07360 FvH4_7g07390 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460 FvH4_7g09460
malus_domestica MD00G1136300.v1.1 MD02G1236000.v1.1 MD02G1236100.v1.1 MD05G1184200.v1.1 MD05G1184300.v1.1 MD05G1184400.v1.1 MD05G1184600.v1.1 MD10G1172100.v1.1 MD10G1172200.v1.1 MD10G1172300.v1.1 MD13G1227600.v1.1 MD14G1232100.v1.1 MD14G1232200.v1.1 MD16G1011600.v1.1 MD16G1232800.v1.1 MD16G1232900.v1.1
prunus_persica Prupe.1G039900_v2.0.a1 Prupe.1G054800_v2.0.a1 Prupe.1G054900_v2.0.a1 Prupe.1G055000_v2.0.a1 Prupe.1G055300_v2.0.a1 Prupe.1G055900_v2.0.a1 Prupe.1G056000_v2.0.a1 Prupe.1G056100_v2.0.a1 Prupe.1G526000_v2.0.a1 Prupe.2G101400_v2.0.a1 Prupe.2G101500_v2.0.a1 Prupe.2G101600_v2.0.a1 Prupe.5G228000_v2.0.a1 Prupe.5G228100_v2.0.a1 Prupe.8G210200_v2.0.a1 Prupe.8G210300_v2.0.a1 Prupe.8G210400_v2.0.a1 Prupe.8G210500_v2.0.a1 Prupe.8G210600_v2.0.a1 Prupe.8G210700_v2.0.a1 Prupe.8G210800_v2.0.a1 Prupe.8G210800_v2.0.a1
pyrus_communis pycom02g20280 pycom02g20290 pycom02g20300 pycom05g16920 pycom05g16930 pycom05g16940 pycom07g06270 pycom10g14850 pycom10g14860 pycom10g14870 pycom14g19350 pycom16g19480
rosa_chinensis RchiOBHm_Chr1g0327741 RchiOBHm_Chr1g0339611 RchiOBHm_Chr1g0339631 RchiOBHm_Chr1g0339651 RchiOBHm_Chr1g0339671 RchiOBHm_Chr1g0339691 RchiOBHm_Chr1g0339761 RchiOBHm_Chr1g0339771 RchiOBHm_Chr1g0339781 RchiOBHm_Chr1g0364471 RchiOBHm_Chr1g0364481 RchiOBHm_Chr1g0364501 RchiOBHm_Chr1g0364511 RchiOBHm_Chr4g0396351 RchiOBHm_Chr4g0396391 RchiOBHm_Chr4g0396421 RchiOBHm_Chr4g0396431 RchiOBHm_Chr4g0396441 RchiOBHm_Chr4g0396461 RchiOBHm_Chr4g0396521 RchiOBHm_Chr4g0400161 RchiOBHm_Chr6g0285721 RchiOBHm_Chr6g0285731 RchiOBHm_Chr6g0285741 RchiOBHm_Chr6g0285761 RchiOBHm_Chr6g0285771 RchiOBHm_Chr6g0285781 RchiOBHm_Chr6g0285791 RchiOBHm_Chr6g0285801 RchiOBHm_Chr6g0285821 RchiOBHm_Chr6g0285831 RchiOBHm_Chr7g0179081 RchiOBHm_Chr7g0179091 RchiOBHm_Chr7g0179101 RchiOBHm_Chr7g0215201 RchiOBHm_Chr7g0237741
rosa_laevigata RLG00000000971 RLG00000002403 RLG00000005385 RLG00000005386 RLG00000005387 RLG00000009530 RLG00000009533 RLG00000009534 RLG00000009545 RLG00000009547 RLG00000009548 RLG00000012606 RLG00000012607 RLG00000012608 RLG00000012609 RLG00000012612 RLG00000012613 RLG00000012614 RLG00000015071 RLG00000020454 RLG00000020455 RLG00000027472 RLG00000027473 RLG00000027474 RLG00000027477 RLG00000029240 RLG00000029241
rosa_multiflora Rmu_co8321391.1_g000001 Rmu_co8330237.1_g000001 Rmu_sc0000037.1_g000019 Rmu_sc0000483.1_g000002 Rmu_sc0000511.1_g000018 Rmu_sc0000888.1_g000016 Rmu_sc0000888.1_g000017 Rmu_sc0001356.1_g000009 Rmu_sc0001356.1_g000010 Rmu_sc0001781.1_g000011 Rmu_sc0001781.1_g000020 Rmu_sc0001781.1_g000022 Rmu_sc0001781.1_g000023 Rmu_sc0001781.1_g000043 Rmu_sc0002862.1_g000013 Rmu_sc0003707.1_g000006 Rmu_sc0003707.1_g000007 Rmu_sc0003919.1_g000009 Rmu_sc0004321.1_g000006 Rmu_sc0005500.1_g000001 Rmu_sc0007814.1_g000001 Rmu_sc0007814.1_g000002 Rmu_sc0007814.1_g000010 Rmu_sc0009238.1_g000007 Rmu_sc0009409.1_g000003 Rmu_sc0011138.1_g000004 Rmu_sc0013252.1_g000003 Rmu_sc0017632.1_g000005 Rmu_sc0021325.1_g000002 Rmu_sc0021325.1_g000004 Rmu_sc0021325.1_g000005 Rmu_sc0021325.1_g000008 Rmu_sc0021325.1_g000009 Rmu_sc0028323.1_g000001 Rmu_sc0036111.1_g000001 Rmu_sc0041231.1_g000001 Rmu_ssc0000067.1_g000034 Rmu_ssc0000234.1_g000019 Rmu_ssc0000278.1_g000016
rosa_roxburghii Rroxscaffold_3G00244460 Rroxscaffold_3G00274390 Rroxscaffold_3G00274400 Rroxscaffold_3G00274410 Rroxscaffold_4G00291800 Rroxscaffold_4G00291810 Rroxscaffold_4G00292220 Rroxscaffold_4G00292230 Rroxscaffold_4G00292250 Rroxscaffold_4G00313630 Rroxscaffold_4G00313640 Rroxscaffold_4G00313650 Rroxscaffold_4G00313660 Rroxscaffold_4G00313670 Rroxscaffold_4G00313690 Rroxscaffold_5G00341170 Rroxscaffold_5G00341180 Rroxscaffold_5G00341200 Rroxscaffold_5G00341210 Rroxscaffold_5G00341340 Rroxscaffold_5G00341350 Rroxscaffold_5G00341360 Rroxscaffold_5G00341380 Rroxscaffold_5G00345120 Rroxscaffold_7G00182670 Rroxscaffold_7G00182680 Rroxscaffold_7G00182700 Rroxscaffold_7G00182710 Rroxscaffold_7G00182730 Rroxscaffold_7G00182770 Rroxscaffold_7G00182790 Rroxscaffold_7G00182800 Rroxscaffold_7G00212460
rosa_rugosa Rorug01G0139800.1 Rorug01G0140000.1 Rorug03G0349500 Rorug03G0349500 Rorug03G0349500 Rorug03G0349600 Rorug03G0349600 Rorug04G0023100 Rorug05G0538200 Rorug06G0176800 Rorug06G0177100 Rorug06G0420800 Rorug06G0420900 Rorug06G0421000 Rorug07G0307700
rosa_samantha Rh1AG086600 Rh1AG324800 Rh1DG318900 Rh4AG067600 Rh4AG068400 Rh4AG069200 Rh4BG096900 Rh4CG073400 Rh4CG073900 Rh4CG074500 Rh4DG063500 Rh4DG063700 Rh4DG063800 Rh4DG064000 Rh4DG093500 Rh6AG288300 Rh6AG288400 Rh6AG288500 Rh6AG288600 Rh6AG288700 Rh6AG288800 Rh6BG289900 Rh6BG290000 Rh6BG290100 Rh6BG290400 Rh6BG290800 Rh6BG290900 Rh6CG047000 Rh6CG290900 Rh6CG291000 Rh6CG291100 Rh6CG291300 Rh6CG291400 Rh6CG291500 Rh6CG291600 Rh6CG291700 Rh6CG291800 Rh6DG042500 Rh7AG020300 Rh7AG287600 Rh7BG020000 Rh7CG021200 Rh7CG021400 Rh7CG307400 Rh7DG020900
rosa_wichuraiana Rw0G006240 Rw0G019430 Rw1G013000 Rw1G013020 Rw1G013040 Rw1G013070 Rw1G013090 Rw1G028790 Rw1G028800 Rw1G028810 Rw4G005480 Rw4G005500 Rw4G005520 Rw4G005530 Rw4G005540 Rw4G005560 Rw4G005570 Rw6G004910 Rw6G024770 Rw6G024780 Rw6G024790 Rw6G024800 Rw6G024810 Rw6G024820 Rw6G024830 Rw6G024840 Rw6G024850 Rw6G024860 Rw6G024870 Rw6G024880 Rw6G024890 Rw7G001680 Rw7G001690 Rw7G001700 Rw7G038360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 554
AccB1I GGYRCC 1 cut(s) 610
AcsI RAATTY 3 cut(s) 265, 362, 563
AcuI CTGAAG 1 cut(s) 86
AfaI GTAC 1 cut(s) 335
AflIII ACRYGT 2 cut(s) 429, 511
AgsI TTSAA 6 cut(s) 101, 111, 134, 212, 331, 437
AluBI AGCT 6 cut(s) 16, 36, 70, 305, 457, 601
AluI AGCT 6 cut(s) 16, 36, 70, 305, 457, 601
Alw21I GWGCWC 1 cut(s) 174
Alw26I GTCTC 1 cut(s) 540
Alw44I GTGCAC 1 cut(s) 170
AlwNI CAGNNNCTG 1 cut(s) 167
AoxI GGCC 2 cut(s) 260, 536
ApaLI GTGCAC 1 cut(s) 170
ApeKI GCWGC 1 cut(s) 247
ApoI RAATTY 3 cut(s) 265, 362, 563
AspLEI GCGC 1 cut(s) 403
AspS9I GGNCC 1 cut(s) 260
AsuHPI GGTGA 1 cut(s) 283
BaeGI GKGCMC 2 cut(s) 64, 174
BanI GGYRCC 1 cut(s) 610
Bbv12I GWGCWC 1 cut(s) 174
BbvI GCAGC 1 cut(s) 234
BccI CCATC 2 cut(s) 101, 402
BclI TGATCA 1 cut(s) 522
BcoDI GTCTC 1 cut(s) 540
BfaI CTAG 1 cut(s) 543
BglII AGATCT 1 cut(s) 103
BisI GCNGC 1 cut(s) 248
BlsI GCNGC 1 cut(s) 249
BmcAI AGTACT 1 cut(s) 335
BmgT120I GGNCC 1 cut(s) 260
BmiI GGNNCC 2 cut(s) 159, 612
Bse1I ACTGG 1 cut(s) 161
BseGI GGATG 2 cut(s) 93, 413
BseNI ACTGG 1 cut(s) 161
BseSI GKGCMC 2 cut(s) 64, 174
BseXI GCAGC 1 cut(s) 234
BsgI GTGCAG 1 cut(s) 233
BshFI GGCC 2 cut(s) 262, 538
BshNI GGYRCC 1 cut(s) 610
BsiHKAI GWGCWC 1 cut(s) 174
BslFI GGGAC 1 cut(s) 65
BsmAI GTCTC 1 cut(s) 540
BsmFI GGGAC 1 cut(s) 65
BsnI GGCC 2 cut(s) 262, 538
Bsp1286I GDGCHC 2 cut(s) 64, 174
Bsp143I GATC 2 cut(s) 103, 522
BspANI GGCC 2 cut(s) 262, 538
BspLI GGNNCC 2 cut(s) 159, 612
BspT107I GGYRCC 1 cut(s) 610
BsrI ACTGG 1 cut(s) 161
BssMI GATC 2 cut(s) 103, 522
Bst4CI ACNGT 1 cut(s) 169
Bst6I CTCTTC 1 cut(s) 432
BstC8I GCNNGC 1 cut(s) 414
BstF5I GGATG 2 cut(s) 93, 413
BstHHI GCGC 1 cut(s) 403
BstKTI GATC 2 cut(s) 106, 525
BstMAI GTCTC 1 cut(s) 540
BstMBI GATC 2 cut(s) 103, 522
BstMWI GCNNNNNNNGC 1 cut(s) 409
BstNSI RCATGY 1 cut(s) 515
BstSLI GKGCMC 2 cut(s) 64, 174
BstV1I GCAGC 1 cut(s) 234
BstX2I RGATCY 1 cut(s) 103
BstYI RGATCY 1 cut(s) 103
BsuRI GGCC 2 cut(s) 262, 538
BtsCI GGATG 2 cut(s) 93, 413
BtsIMutI CAGTG 2 cut(s) 62, 168
Cac8I GCNNGC 1 cut(s) 414
CaiI CAGNNNCTG 1 cut(s) 167
CfoI GCGC 1 cut(s) 403
Cfr13I GGNCC 1 cut(s) 260
Csp6I GTAC 1 cut(s) 334
CviAII CATG 4 cut(s) 27, 228, 422, 512
CviQI GTAC 1 cut(s) 334
DpnI GATC 2 cut(s) 105, 524
DpnII GATC 2 cut(s) 103, 522
DrdI GACNNNNNNGTC 1 cut(s) 554
DseDI GACNNNNNNGTC 1 cut(s) 554
Eam1104I CTCTTC 1 cut(s) 432
EarI CTCTTC 1 cut(s) 432
Eco57I CTGAAG 1 cut(s) 86
FaeI CATG 4 cut(s) 30, 231, 425, 515
FaiI YATR 7 cut(s) 28, 87, 150, 229, 423, 513, 521
FalI AAGNNNNNCTT 4 cut(s) 311, 343, 350, 382
FaqI GGGAC 1 cut(s) 65
FatI CATG 4 cut(s) 26, 227, 421, 511
FbaI TGATCA 1 cut(s) 522
Fnu4HI GCNGC 1 cut(s) 248
FokI GGATG 2 cut(s) 80, 420
Fsp4HI GCNGC 1 cut(s) 248
FspBI CTAG 1 cut(s) 543
GlaI GCGC 1 cut(s) 402
GluI GCNGC 1 cut(s) 248
HaeIII GGCC 2 cut(s) 262, 538
HhaI GCGC 1 cut(s) 403
Hin1II CATG 4 cut(s) 30, 231, 425, 515
Hin6I GCGC 1 cut(s) 401
HinP1I GCGC 1 cut(s) 401
HindIII AAGCTT 1 cut(s) 34
HinfI GANTC 1 cut(s) 194
HphI GGTGA 1 cut(s) 283
Hpy166II GTNNAC 2 cut(s) 172, 587
Hpy188I TCNGA 2 cut(s) 407, 490
Hpy188III TCNNGA 2 cut(s) 543, 595
Hpy8I GTNNAC 2 cut(s) 172, 587
HpyAV CCTTC 5 cut(s) 148, 278, 335, 549, 601
HpyCH4III ACNGT 1 cut(s) 169
HpyCH4IV ACGT 1 cut(s) 429
HpyCH4V TGCA 3 cut(s) 172, 250, 416
HpyF10VI GCNNNNNNNGC 1 cut(s) 409
HpySE526I ACGT 1 cut(s) 429
Hsp92II CATG 4 cut(s) 30, 231, 425, 515
HspAI GCGC 1 cut(s) 401
Ksp22I TGATCA 1 cut(s) 522
Kzo9I GATC 2 cut(s) 103, 522
LpnPI CCDG 2 cut(s) 174, 554
Lsp1109I GCAGC 1 cut(s) 234
MaeI CTAG 1 cut(s) 543
MaeII ACGT 1 cut(s) 429
MaeIII GTNAC 2 cut(s) 163, 556
MalI GATC 2 cut(s) 105, 524
MboI GATC 2 cut(s) 103, 522
MboII GAAGA 5 cut(s) 113, 122, 449, 479, 616
MfeI CAATTG 1 cut(s) 186
MflI RGATCY 1 cut(s) 103
MhlI GDGCHC 2 cut(s) 64, 174
MluCI AATT 6 cut(s) 186, 265, 362, 381, 532, 563
MnlI CCTC 4 cut(s) 42, 214, 292, 433
MseI TTAA 1 cut(s) 350
MslI CAYNNNNRTG 1 cut(s) 616
MunI CAATTG 1 cut(s) 186
MwoI GCNNNNNNNGC 1 cut(s) 409
NdeII GATC 2 cut(s) 103, 522
NlaIII CATG 4 cut(s) 30, 231, 425, 515
NlaIV GGNNCC 2 cut(s) 159, 612
NmuCI GTSAC 2 cut(s) 163, 556
NspI RCATGY 1 cut(s) 515
PciI ACATGT 1 cut(s) 511
PfeI GAWTC 1 cut(s) 194
PflFI GACNNNGTC 1 cut(s) 28
PkrI GCNGC 1 cut(s) 249
PscI ACATGT 1 cut(s) 511
PspN4I GGNNCC 2 cut(s) 159, 612
PspPI GGNCC 1 cut(s) 260
PsrI GAACNNNNNNTAC 2 cut(s) 317, 349
PstNI CAGNNNCTG 1 cut(s) 167
PsuI RGATCY 1 cut(s) 103
PsyI GACNNNGTC 1 cut(s) 28
RsaI GTAC 1 cut(s) 335
RsaNI GTAC 1 cut(s) 334
RseI CAYNNNNRTG 1 cut(s) 616
SaqAI TTAA 1 cut(s) 350
SatI GCNGC 1 cut(s) 248
Sau3AI GATC 2 cut(s) 103, 522
Sau96I GGNCC 1 cut(s) 260
ScaI AGTACT 1 cut(s) 335
SduI GDGCHC 2 cut(s) 64, 174
SmiMI CAYNNNNRTG 1 cut(s) 616
Sse9I AATT 6 cut(s) 186, 265, 362, 381, 532, 563
SspMI CTAG 1 cut(s) 543
TaaI ACNGT 1 cut(s) 169
TaiI ACGT 1 cut(s) 432
TasI AATT 6 cut(s) 186, 265, 362, 381, 532, 563
TatI WGTACW 1 cut(s) 333
TfiI GAWTC 1 cut(s) 194
Tru1I TTAA 1 cut(s) 350
Tru9I TTAA 1 cut(s) 350
TscAI CASTG 2 cut(s) 69, 168
TseFI GTSAC 2 cut(s) 163, 556
TseI GCWGC 1 cut(s) 247
Tsp45I GTSAC 2 cut(s) 163, 556
TspDTI ATGAA 1 cut(s) 137
TspGWI ACGGA 2 cut(s) 192, 566
TspRI CASTG 2 cut(s) 69, 168
Tth111I GACNNNGTC 1 cut(s) 28
VneI GTGCAC 1 cut(s) 170
XapI RAATTY 3 cut(s) 265, 362, 563
XbaI TCTAGA 1 cut(s) 542
XceI RCATGY 1 cut(s) 515
XspI CTAG 1 cut(s) 543
ZrmI AGTACT 1 cut(s) 335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.