Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0001291

Physical Location & Seq

Genomic Coordinates Reverse (-)

17595743 .. 17599061

Gene Structure 3319 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g25710.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2526 bp

ATGAATATGGGTGATTTTAGGGGTCCTCCTCTTCCTCCACCTATTCTAGAGGATGAGGGTTGGCGGCTGCAAGTATATGAGAAAGATACTATGTTGGTATGTTATAATAAAACGATAACACACGCTACTGGAGTGTGGAAGGCTGAAAATGCCTTGCTTAATACTCTTCCTACATTCTTCACTCAACTTGCTCTCATCCTTACCTTCACTTACCTTCTCAAGCGTCTCTTTAAACCTTTGCGCATATCGTGCTTGGTCGCCAACGTTCTGGGAGGCTTGATTATCGGTCCATCTGGATTTGCTTTCCAGAAATTCTCTCTCAATTACATTGTTCCTTTTGGATCGATAATGACCCTGGAAACAATTGCCAACTACGGCTTGATTTACTTCATGTTCCTCAAGGGATTAGAGGTGGATTTGAAACCGATACTTCATGCTCGTAATAGGGTATTGAGCATTGCCATGGCAAGCATGGTCATTCCAGCCCCTATTGGCTATGCTCTACATAAGTTACTACTGAAGGAGGCCAAGATTGGTGCTCATAATATGTTAATGAATGGCTCTCTCTTCTGGGGACTTGCTCTTTCCACCACTAATTTCTCTGAACTGGCTCAACTACTTGCAAGTGTCAAGCTCCTTCGCTCTGAAATTGGTCGAACAGCTCTATCCATAACTGTTATCACCGACTTCATATCTTGGGTTCTTCTTGTGATCACAATGGCTGCTGTGAATAATTATCACCTTCATACAATGTTATCCACCCTTGCATTCATAATAGTCTGCATATTTGTTCTTCGTCCAGCTATTTCATGGATTGTACATCACACCAACATTGATGAACACTACGATGAGCACCATGTAAGTCTTGCTCTTTTTGGGGCTGTTCTATTCGGGTACATTACCGATTCGTGTGGATCACACTCCATTGTAGGAGCTTTCATGTTGGGTGTGATTTTGCCCAGGGGAGAGCTCAAAAATACAATAACGGAAAAGGTTGAATACTTTGTCTCCGAGATTATGCTGCCACTCTTCTTCCTAGTTATTGGGATGAGACTACACCATACTCTTACGGGTATTCGGATAGTACTGTTCTTGGCAATTATTGTGTTGGCTTTCTTGGCTAAACTCGTTGTAACTTCCATCGCTGCTCTAATCTCTCAAATGTCACTACGAGATAGTTTTGCTCTTGGACTACTCATGAACACCAAAGGCGTGCTTGCACTGATTATCCTCAATGTCGGCCGTGATCTAAAGGTTCTGGACAACCAATCATTCTCAATAATGGTGTATGCCGTTGTGGTAATGACGGGAATTATTGGACCCATTATGACTATCCTTTACGAGTCATCTGGCACATCTAAGCAGATCCAGTGCAAAAGTATAAGAAGCATACAACAATCCAACTCCGAGTTCCGAGTCCTTGCTTGCATTCATAAATCCCAAAACGTACCTGGTATAGTGAACCTCTTAGAGGCTTCTTATCCGACCAAGGAATCTCCGATGAGTGTGTTTGCAGTCCACTTAGTAGAGCTTACGAGCAGCCATGCCTCGGCCATGCTCATAGTGCACGACACCTGCAAGTCCACCGTGGGAGGAAGCCGGAAAGGCGACGACATTTTGACCGCCTTCGAAAACTTCCAGAACGAAAATGATGGCACCACAGTACAAGCACTCACTGCAATATCTTCTTACACCACCATGCATGAGGACATTCGTAGCCTCTCTGGGGAGAAGGACGCAAACCTAATAATAGTCCCATTTCATAACGAATCTACATTGGATGGGGGAGTAGAGGACGTTAACTCTTCAATCAGACTAGTCAACAGCAACGTTCTACACAACTCGCCGTGCTCGGTGGCTGTCTTTGTGGACCGCGGCCTCAAGAGCACACTAACCGAGTCGTCGTCCGGCAACAACCGCCGCCACCATTACGCCATGCTGTTCACCGGTGGGCCAGATGACCGAGAGGCATTAGCATATGCATGGAGGATGGCTGAAAACCCTAATGTGAATTTGACCGTTGTGAGAATCATCGCCGGAGAAGATGCTACGTTTGATTTCCCCGATAAAGACGGAATTCTAAAGGCCATGCGAGACAGCGAAATGCAGAAGCTACTAGACGACCAGTACATAGAGAGTTTGCTGATCAACACCAGGAACCAACCTTCAATAAAATTAACTGAGAAGGTGGTCAACAACGGTGAAGAAACTATACAACTGATAAGTTCCATGGGAAATGATTATGATCTTTGTATAGTGGGACGAGGGACAAAAGTTTCCTCACCTCTAACGTTTGGGCTTTCCTCCGACTGGGGCGATTGCCCGGAATTGGGACCGATGGGGGATACATTGGTGTCGTCGAGCTTCTTGGTTAATGCGTCGATTCTGGTAGTGCAAAAAGGTACTACATCAGAGAATAATGAACCTCTAAGAGACTCTGCACACAGCAAAGGAGCTCAAGGGTCCTTTGTCAATTACCGTAACGGTAAAGCTGATGGTGACGAAAGTGATGATGATCGGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0042592 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

842

Amino Acids

92.38

Weight (kDa)

5.95

Isoelectric Point (pI)

31.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	67 - 444	1.6e-56	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	502 - 629	2.5e-19	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	646 - 802	3.6e-21	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001291)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g25710 FvH4_5g31470 FvH4_7g01800
malus_domestica	MD02G1284400.v1.1 MD02G1284600.v1.1 MD02G1284900.v1.1 MD02G1285000.v1.1 MD02G1285100.v1.1 MD02G1296900.v1.1 MD07G1050200.v1.1 MD07G1050300.v1.1 MD15G1139600.v1.1
prunus_persica	Prupe.2G027500_v2.0.a1 Prupe.2G038300_v2.0.a1 Prupe.2G040900_v2.0.a1 Prupe.4G283300_v2.0.a1 Prupe.4G283400_v2.0.a1 Prupe.4G283500_v2.0.a1 Prupe.4G283500_v2.0.a1 Prupe.4G284600_v2.0.a1 Prupe.4G284900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0318411 RchiOBHm_Chr5g0030741 RchiOBHm_Chr7g0226891
rosa_laevigata	RLG00000001685 RLG00000030540 RLG00000033248
rosa_multiflora	Rmu_co8328645.1_g000001 Rmu_co8411059.1_g000001 Rmu_sc0002662.1_g000016 Rmu_sc0003238.1_g000035 Rmu_sc0003936.1_g000039 Rmu_sc0034904.1_g000001
rosa_roxburghii	Rroxscaffold_3G00232440 Rroxscaffold_4G00329260
rosa_rugosa	Rorug01G0021100 Rorug05G0120500 Rorug07G0240000.1
rosa_samantha	Rh1AG033200 Rh1BG029000 Rh1CG031500 Rh1DG038000 Rh5AG212000 Rh5BG211100 Rh5CG234800 Rh5DG216300 Rh7AG387600 Rh7BG374100 Rh7CG407200 Rh7DG386300
rosa_wichuraiana	Rw0G000940 Rw0G000950 Rw1G002660 Rw5G019460 Rw7G032560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	105
AarI	CACCTGC	1 cut(s)	1583
Acc16I	TGCGCA	1 cut(s)	242
Acc36I	ACCTGC	1 cut(s)	1583
AccB1I	GGYRCC	1 cut(s)	1655
AccII	CGCG	1 cut(s)	1875
AciI	CCGC	6 cut(s)	64, 1623, 1873, 1875, 1918, 1921
AclI	AACGTT	3 cut(s)	264, 1830, 2291
AclWI	GGATC	3 cut(s)	349, 922, 1360
AcoI	YGGCCR	2 cut(s)	1240, 1551
AcsI	RAATTY	3 cut(s)	311, 2011, 2076
AcuI	CTGAAG	1 cut(s)	539
AfaI	GTAC	7 cut(s)	819, 896, 1086, 1449, 1665, 2129, 2404
AfiI	CCNNNNNNNGG	6 cut(s)	1471, 1549, 1726, 2310, 2329, 2330
AgeI	ACCGGT	1 cut(s)	1946
AgsI	TTSAA	4 cut(s)	421, 998, 1809, 2169
AhlI	ACTAGT	1 cut(s)	1816
AjnI	CCWGG	4 cut(s)	354, 959, 1450, 2153
AjuI	GAANNNNNNNTTGG	2 cut(s)	1394, 1426
Alw21I	GWGCWC	7 cut(s)	541, 855, 972, 1569, 1853, 1889, 2458
Alw26I	GTCTC	5 cut(s)	230, 1012, 1045, 2088, 2427
Alw44I	GTGCAC	1 cut(s)	1565
AlwI	GGATC	3 cut(s)	349, 922, 1360
AoxI	GGCC	6 cut(s)	525, 1240, 1551, 1876, 1952, 2085
ApaLI	GTGCAC	1 cut(s)	1565
ApeKI	GCWGC	5 cut(s)	67, 722, 1021, 1145, 1539
ApoI	RAATTY	3 cut(s)	311, 2011, 2076
AsiGI	ACCGGT	1 cut(s)	1946
AspLEI	GCGC	1 cut(s)	243
AspS9I	GGNCC	7 cut(s)	23, 287, 1319, 1870, 1952, 2333, 2463
AsuC2I	CCSGG	1 cut(s)	2324
AsuHPI	GGTGA	7 cut(s)	23, 673, 731, 1936, 2213, 2274, 2510
AsuII	TTCGAA	1 cut(s)	1629
AvaII	GGWCC	6 cut(s)	23, 287, 1319, 1870, 2333, 2463
BaeGI	GKGCMC	1 cut(s)	1569
BaeI	ACNNNNGTAYC	2 cut(s)	2337, 2370
BanI	GGYRCC	1 cut(s)	1655
BanII	GRGCYC	2 cut(s)	972, 2458
BarI	GAAGNNNNNNTAC	2 cut(s)	2196, 2228
Bbv12I	GWGCWC	7 cut(s)	541, 855, 972, 1569, 1853, 1889, 2458
BbvI	GCAGC	5 cut(s)	54, 709, 1008, 1132, 1551
BccI	CCATC	7 cut(s)	298, 1148, 1646, 1775, 1984, 2332, 2489
BceAI	ACGGC	4 cut(s)	391, 1227, 1277, 1831
BciT130I	CCWGG	4 cut(s)	356, 961, 1452, 2155
BciVI	GTATCC	1 cut(s)	2338
BclI	TGATCA	2 cut(s)	711, 2145
BcnI	CCSGG	1 cut(s)	2324
BcoDI	GTCTC	5 cut(s)	230, 1012, 1045, 2088, 2427
BcuI	ACTAGT	1 cut(s)	1816
BfaI	CTAG	4 cut(s)	47, 1037, 1817, 2117
BfuAI	ACCTGC	1 cut(s)	1583
BfuI	GTATCC	1 cut(s)	2338
BglI	GCCNNNNNGGC	1 cut(s)	1605
BisI	GCNGC	8 cut(s)	65, 68, 723, 1022, 1146, 1540, 1876, 1921
BlsI	GCNGC	8 cut(s)	66, 69, 724, 1023, 1147, 1541, 1877, 1922
BmcAI	AGTACT	1 cut(s)	1086
Bme1390I	CCNGG	5 cut(s)	356, 961, 1452, 2155, 2324
Bme18I	GGWCC	6 cut(s)	23, 287, 1319, 1870, 2333, 2463
BmgT120I	GGNCC	7 cut(s)	23, 287, 1319, 1870, 1952, 2333, 2463
BmiI	GGNNCC	6 cut(s)	24, 1321, 1657, 2159, 2334, 2464
BmrFI	CCNGG	5 cut(s)	356, 961, 1452, 2155, 2324
BmrI	ACTGGG	1 cut(s)	2320
BmsI	GCATC	1 cut(s)	2035
BmuI	ACTGGG	1 cut(s)	2320
BpmI	CTGGAG	1 cut(s)	150
Bpu14I	TTCGAA	1 cut(s)	1629
BpuEI	CTTGAG	4 cut(s)	203, 383, 1865, 2442
BpuMI	CCSGG	1 cut(s)	2324
Bsa29I	ATCGAT	1 cut(s)	344
BsaBI	GATNNNNATC	2 cut(s)	2244, 2514
BsaJI	CCNNGG	9 cut(s)	354, 462, 959, 960, 1488, 1548, 1587, 1873, 2229
BsaWI	WCCGGW	1 cut(s)	1946
BsaXI	ACNNNNNCTCC	2 cut(s)	992, 1022
Bsc4I	CCNNNNNNNGG	6 cut(s)	1471, 1549, 1726, 2310, 2329, 2330
Bse118I	RCCGGY	1 cut(s)	1946
Bse1I	ACTGG	5 cut(s)	133, 612, 1369, 2125, 2315
Bse3DI	GCAATG	1 cut(s)	456
Bse8I	GATNNNNATC	2 cut(s)	2244, 2514
BseBI	CCWGG	4 cut(s)	356, 961, 1452, 2155
BseCI	ATCGAT	1 cut(s)	344
BseDI	CCNNGG	9 cut(s)	354, 462, 959, 960, 1488, 1548, 1587, 1873, 2229
BseGI	GGATG	5 cut(s)	58, 195, 1053, 1786, 1995
BseJI	GATNNNNATC	2 cut(s)	2244, 2514
BseLI	CCNNNNNNNGG	6 cut(s)	1471, 1549, 1726, 2310, 2329, 2330
BseMI	GCAATG	1 cut(s)	456
BseMII	CTCAG	1 cut(s)	2172
BseNI	ACTGG	5 cut(s)	133, 612, 1369, 2125, 2315
BseRI	GAGGAG	1 cut(s)	18
BseSI	GKGCMC	1 cut(s)	1569
BseX3I	CGGCCG	1 cut(s)	1240
BseXI	GCAGC	5 cut(s)	54, 709, 1008, 1132, 1551
BsgI	GTGCAG	1 cut(s)	2424
Bsh1236I	CGCG	1 cut(s)	1875
Bsh1285I	CGRYCG	1 cut(s)	1243
BshFI	GGCC	6 cut(s)	527, 1242, 1553, 1878, 1954, 2087
BshNI	GGYRCC	1 cut(s)	1655
BshTI	ACCGGT	1 cut(s)	1946
BshVI	ATCGAT	1 cut(s)	344
BsiEI	CGRYCG	1 cut(s)	1243
BsiHKAI	GWGCWC	7 cut(s)	541, 855, 972, 1569, 1853, 1889, 2458
BsiSI	CCGG	5 cut(s)	1600, 1908, 1947, 2037, 2324
BslFI	GGGAC	5 cut(s)	588, 1739, 2274, 2281, 2346
BslI	CCNNNNNNNGG	6 cut(s)	1471, 1549, 1726, 2310, 2329, 2330
BsmAI	GTCTC	5 cut(s)	230, 1012, 1045, 2088, 2427
BsmBI	CGTCTC	1 cut(s)	230
BsmFI	GGGAC	5 cut(s)	588, 1739, 2274, 2281, 2346
BsmI	GAATGC	2 cut(s)	767, 1428
BsnI	GGCC	6 cut(s)	527, 1242, 1553, 1878, 1954, 2087
Bsp119I	TTCGAA	1 cut(s)	1629
Bsp1286I	GDGCHC	7 cut(s)	541, 855, 972, 1569, 1853, 1889, 2458
Bsp1407I	TGTACA	1 cut(s)	817
Bsp143I	GATC	8 cut(s)	341, 711, 914, 1246, 1365, 2145, 2245, 2515
Bsp19I	CCATGG	2 cut(s)	462, 2229
BspACI	CCGC	6 cut(s)	64, 1623, 1873, 1875, 1918, 1921
BspANI	GGCC	6 cut(s)	527, 1242, 1553, 1878, 1954, 2087
BspCNI	CTCAG	1 cut(s)	2173
BspDI	ATCGAT	1 cut(s)	344
BspFNI	CGCG	1 cut(s)	1875
BspHI	TCATGA	1 cut(s)	1197
BspLI	GGNNCC	6 cut(s)	24, 1321, 1657, 2159, 2334, 2464
BspMI	ACCTGC	1 cut(s)	1583
BspPI	GGATC	3 cut(s)	349, 922, 1360
BspT104I	TTCGAA	1 cut(s)	1629
BspT107I	GGYRCC	1 cut(s)	1655
BsrDI	GCAATG	1 cut(s)	456
BsrFI	RCCGGY	1 cut(s)	1946
BsrGI	TGTACA	1 cut(s)	817
BsrI	ACTGG	5 cut(s)	133, 612, 1369, 2125, 2315
BssAI	RCCGGY	1 cut(s)	1946
BssECI	CCNNGG	9 cut(s)	354, 462, 959, 960, 1488, 1548, 1587, 1873, 2229
BssMI	GATC	8 cut(s)	341, 711, 914, 1246, 1365, 2145, 2245, 2515
BssT1I	CCWWGG	3 cut(s)	462, 1488, 2229
Bst2UI	CCWGG	4 cut(s)	356, 961, 1452, 2155
Bst4CI	ACNGT	8 cut(s)	676, 1089, 1588, 1663, 2020, 2201, 2480, 2486
Bst6I	CTCTTC	5 cut(s)	36, 171, 572, 1034, 1810
BstAPI	GCANNNNNTGC	2 cut(s)	249, 1676
BstAUI	TGTACA	1 cut(s)	817
BstBI	TTCGAA	1 cut(s)	1629
BstC8I	GCNNGC	4 cut(s)	469, 1214, 1218, 1426
BstDEI	CTNAG	5 cut(s)	1359, 1468, 1522, 2181, 2429
BstDSI	CCRYGG	4 cut(s)	462, 1587, 1873, 2229
BstENI	CCTNNNNNAGG	1 cut(s)	1469
BstF5I	GGATG	5 cut(s)	58, 195, 1053, 1786, 1995
BstFNI	CGCG	1 cut(s)	1875
BstHHI	GCGC	1 cut(s)	243
BstKTI	GATC	8 cut(s)	344, 714, 917, 1249, 1368, 2148, 2248, 2518
BstMAI	GTCTC	5 cut(s)	230, 1012, 1045, 2088, 2427
BstMBI	GATC	8 cut(s)	341, 711, 914, 1246, 1365, 2145, 2245, 2515
BstMCI	CGRYCG	1 cut(s)	1243
BstMWI	GCNNNNNNNGC	8 cut(s)	149, 249, 1118, 1564, 1605, 1676, 1884, 1917
BstNI	CCWGG	4 cut(s)	356, 961, 1452, 2155
BstSCI	CCNGG	5 cut(s)	354, 959, 1450, 2153, 2322
BstSLI	GKGCMC	1 cut(s)	1569
BstUI	CGCG	1 cut(s)	1875
BstV1I	GCAGC	5 cut(s)	54, 709, 1008, 1132, 1551
BstX2I	RGATCY	1 cut(s)	1365
BstXI	CCANNNNNNTGG	1 cut(s)	268
BstYI	RGATCY	1 cut(s)	1365
BstZI	CGGCCG	1 cut(s)	1240
Bsu15I	ATCGAT	1 cut(s)	344
BsuI	GTATCC	1 cut(s)	2338
BsuRI	GGCC	6 cut(s)	527, 1242, 1553, 1878, 1954, 2087
BsuTUI	ATCGAT	1 cut(s)	344
BtgI	CCRYGG	4 cut(s)	462, 1587, 1873, 2229
BtgZI	GCGATG	2 cut(s)	1126, 2017
BtsCI	GGATG	5 cut(s)	58, 195, 1053, 1786, 1995
BtsI	GCAGTG	1 cut(s)	1674
BtsIMutI	CAGTG	3 cut(s)	1220, 1376, 1674
BveI	ACCTGC	1 cut(s)	1583
Cac8I	GCNNGC	4 cut(s)	469, 1214, 1218, 1426
CciI	TCATGA	1 cut(s)	1197
CfoI	GCGC	1 cut(s)	243
Cfr10I	RCCGGY	1 cut(s)	1946
Cfr13I	GGNCC	7 cut(s)	23, 287, 1319, 1870, 1952, 2333, 2463
Cfr42I	CCGCGG	1 cut(s)	1876
ClaI	ATCGAT	1 cut(s)	344
CseI	GACGC	3 cut(s)	212, 1745, 2367
CsiI	ACCWGGT	1 cut(s)	1450
Csp6I	GTAC	7 cut(s)	818, 895, 1085, 1448, 1664, 2128, 2403
CspAI	ACCGGT	1 cut(s)	1946
CviQI	GTAC	7 cut(s)	818, 895, 1085, 1448, 1664, 2128, 2403
DdeI	CTNAG	5 cut(s)	1359, 1468, 1522, 2181, 2429
DpnI	GATC	8 cut(s)	343, 713, 916, 1248, 1367, 2147, 2247, 2517
DpnII	GATC	8 cut(s)	341, 711, 914, 1246, 1365, 2145, 2245, 2515
DraI	TTTAAA	1 cut(s)	232
EaeI	YGGCCR	2 cut(s)	1240, 1551
EagI	CGGCCG	1 cut(s)	1240
Eam1104I	CTCTTC	5 cut(s)	36, 171, 572, 1034, 1810
EarI	CTCTTC	5 cut(s)	36, 171, 572, 1034, 1810
Ecl136II	GAGCTC	2 cut(s)	970, 2456
EclXI	CGGCCG	1 cut(s)	1240
Eco130I	CCWWGG	3 cut(s)	462, 1488, 2229
Eco24I	GRGCYC	2 cut(s)	972, 2458
Eco47I	GGWCC	6 cut(s)	23, 287, 1319, 1870, 2333, 2463
Eco52I	CGGCCG	1 cut(s)	1240
Eco53kI	GAGCTC	2 cut(s)	970, 2456
Eco57I	CTGAAG	1 cut(s)	539
EcoICRI	GAGCTC	2 cut(s)	970, 2456
EcoNI	CCTNNNNNAGG	1 cut(s)	1469
EcoO109I	RGGNCCY	2 cut(s)	23, 2463
EcoRI	GAATTC	1 cut(s)	2076
EcoRII	CCWGG	4 cut(s)	354, 959, 1450, 2153
EcoT14I	CCWWGG	3 cut(s)	462, 1488, 2229
EcoT22I	ATGCAT	2 cut(s)	1704, 1984
EcoT38I	GRGCYC	2 cut(s)	972, 2458
ErhI	CCWWGG	3 cut(s)	462, 1488, 2229
Esp3I	CGTCTC	1 cut(s)	230
FalI	AAGNNNNNCTT	4 cut(s)	212, 244, 1200, 1232
FaqI	GGGAC	5 cut(s)	588, 1739, 2274, 2281, 2346
FauNDI	CATATG	1 cut(s)	1978
FbaI	TGATCA	2 cut(s)	711, 2145
Fnu4HI	GCNGC	8 cut(s)	65, 68, 723, 1022, 1146, 1540, 1876, 1921
FokI	GGATG	5 cut(s)	65, 182, 1060, 1793, 2002
FriOI	GRGCYC	2 cut(s)	972, 2458
Fsp4HI	GCNGC	8 cut(s)	65, 68, 723, 1022, 1146, 1540, 1876, 1921
FspBI	CTAG	4 cut(s)	47, 1037, 1817, 2117
FspI	TGCGCA	1 cut(s)	242
GlaI	GCGC	1 cut(s)	242
GluI	GCNGC	8 cut(s)	65, 68, 723, 1022, 1146, 1540, 1876, 1921
GsuI	CTGGAG	1 cut(s)	150
HaeIII	GGCC	6 cut(s)	527, 1242, 1553, 1878, 1954, 2087
HapII	CCGG	5 cut(s)	1600, 1908, 1947, 2037, 2324
HgaI	GACGC	3 cut(s)	212, 1745, 2367
HhaI	GCGC	1 cut(s)	243
Hin6I	GCGC	1 cut(s)	241
HinP1I	GCGC	1 cut(s)	241
HincII	GTYRAC	3 cut(s)	1801, 1822, 2194
HindII	GTYRAC	3 cut(s)	1801, 1822, 2194
HinfI	GANTC	9 cut(s)	905, 1343, 1416, 1493, 1769, 1898, 2028, 2383, 2435
HpaI	GTTAAC	1 cut(s)	1801
HpaII	CCGG	5 cut(s)	1600, 1908, 1947, 2037, 2324
HphI	GGTGA	7 cut(s)	23, 673, 731, 1936, 2213, 2274, 2510
Hpy166II	GTNNAC	9 cut(s)	1462, 1519, 1567, 1584, 1801, 1822, 1870, 1944, 2194
Hpy188III	TCNNGA	7 cut(s)	47, 294, 307, 1198, 1259, 1639, 1882
Hpy8I	GTNNAC	9 cut(s)	1462, 1519, 1567, 1584, 1801, 1822, 1870, 1944, 2194
Hpy99I	CGWCG	4 cut(s)	1613, 1906, 2362, 2383
HpyCH4III	ACNGT	8 cut(s)	676, 1089, 1588, 1663, 2020, 2201, 2480, 2486
HpyCH4IV	ACGT	6 cut(s)	264, 1446, 1797, 1830, 2051, 2291
HpyF10VI	GCNNNNNNNGC	8 cut(s)	149, 249, 1118, 1564, 1605, 1676, 1884, 1917
HpyF3I	CTNAG	5 cut(s)	1359, 1468, 1522, 2181, 2429
HpySE526I	ACGT	6 cut(s)	264, 1446, 1797, 1830, 2051, 2291
HspAI	GCGC	1 cut(s)	241
Ksp22I	TGATCA	2 cut(s)	711, 2145
KspAI	GTTAAC	1 cut(s)	1801
KspI	CCGCGG	1 cut(s)	1876
Kzo9I	GATC	8 cut(s)	341, 711, 914, 1246, 1365, 2145, 2245, 2515
LmnI	GCTCC	3 cut(s)	639, 932, 2453
Lsp1109I	GCAGC	5 cut(s)	54, 709, 1008, 1132, 1551
LweI	GCATC	1 cut(s)	2035
MabI	ACCWGGT	1 cut(s)	1450
MaeI	CTAG	4 cut(s)	47, 1037, 1817, 2117
MaeII	ACGT	6 cut(s)	264, 1446, 1797, 1830, 2051, 2291
MaeIII	GTNAC	5 cut(s)	510, 1132, 1164, 2480, 2498
MalI	GATC	8 cut(s)	343, 713, 916, 1248, 1367, 2147, 2247, 2517
MboI	GATC	8 cut(s)	341, 711, 914, 1246, 1365, 2145, 2245, 2515
MfeI	CAATTG	1 cut(s)	363
MflI	RGATCY	1 cut(s)	1365
MhlI	GDGCHC	7 cut(s)	541, 855, 972, 1569, 1853, 1889, 2458
MlyI	GAGTC	4 cut(s)	1352, 1425, 1907, 2429
MmeI	TCCRAC	3 cut(s)	1425, 1508, 2331
Mph1103I	ATGCAT	2 cut(s)	1704, 1984
MseI	TTAA	6 cut(s)	159, 231, 551, 1800, 2177, 2373
MslI	CAYNNNNRTG	4 cut(s)	461, 846, 1697, 1981
MspA1I	CMGCKG	1 cut(s)	1875
MspI	CCGG	5 cut(s)	1600, 1908, 1947, 2037, 2324
MspR9I	CCNGG	5 cut(s)	356, 961, 1452, 2155, 2324
MunI	CAATTG	1 cut(s)	363
Mva1269I	GAATGC	2 cut(s)	767, 1428
MvaI	CCWGG	4 cut(s)	356, 961, 1452, 2155
MvnI	CGCG	1 cut(s)	1875
MwoI	GCNNNNNNNGC	8 cut(s)	149, 249, 1118, 1564, 1605, 1676, 1884, 1917
NciI	CCSGG	1 cut(s)	2324
NcoI	CCATGG	2 cut(s)	462, 2229
NdeI	CATATG	1 cut(s)	1978
NdeII	GATC	8 cut(s)	341, 711, 914, 1246, 1365, 2145, 2245, 2515
NlaIV	GGNNCC	6 cut(s)	24, 1321, 1657, 2159, 2334, 2464
NmeAIII	GCCGAG	1 cut(s)	1529
NmuCI	GTSAC	2 cut(s)	1164, 2498
NsbI	TGCGCA	1 cut(s)	242
NsiI	ATGCAT	2 cut(s)	1704, 1984
NspV	TTCGAA	1 cut(s)	1629
PagI	TCATGA	1 cut(s)	1197
PaqCI	CACCTGC	1 cut(s)	1583
PasI	CCCWGGG	1 cut(s)	960
PctI	GAATGC	2 cut(s)	767, 1428
PfeI	GAWTC	5 cut(s)	905, 1493, 1769, 2028, 2383
PinAI	ACCGGT	1 cut(s)	1946
PkrI	GCNGC	8 cut(s)	66, 69, 724, 1023, 1147, 1541, 1877, 1922
PleI	GAGTC	4 cut(s)	1351, 1424, 1906, 2429
PpsI	GAGTC	4 cut(s)	1351, 1424, 1906, 2429
PpuMI	RGGWCCY	2 cut(s)	23, 2463
PsiI	TTATAA	1 cut(s)	105
Psp124BI	GAGCTC	2 cut(s)	972, 2458
Psp1406I	AACGTT	3 cut(s)	264, 1830, 2291
Psp5II	RGGWCCY	2 cut(s)	23, 2463
Psp6I	CCWGG	4 cut(s)	354, 959, 1450, 2153
PspGI	CCWGG	4 cut(s)	354, 959, 1450, 2153
PspN4I	GGNNCC	6 cut(s)	24, 1321, 1657, 2159, 2334, 2464
PspPI	GGNCC	7 cut(s)	23, 287, 1319, 1870, 1952, 2333, 2463
PspPPI	RGGWCCY	2 cut(s)	23, 2463
PsuI	RGATCY	1 cut(s)	1365
RsaI	GTAC	7 cut(s)	819, 896, 1086, 1449, 1665, 2129, 2404
RsaNI	GTAC	7 cut(s)	818, 895, 1085, 1448, 1664, 2128, 2403
RseI	CAYNNNNRTG	4 cut(s)	461, 846, 1697, 1981
SacI	GAGCTC	2 cut(s)	972, 2458
SacII	CCGCGG	1 cut(s)	1876
SaqAI	TTAA	6 cut(s)	159, 231, 551, 1800, 2177, 2373
SatI	GCNGC	8 cut(s)	65, 68, 723, 1022, 1146, 1540, 1876, 1921
Sau3AI	GATC	8 cut(s)	341, 711, 914, 1246, 1365, 2145, 2245, 2515
Sau96I	GGNCC	7 cut(s)	23, 287, 1319, 1870, 1952, 2333, 2463
ScaI	AGTACT	1 cut(s)	1086
SchI	GAGTC	4 cut(s)	1352, 1425, 1907, 2429
ScrFI	CCNGG	5 cut(s)	356, 961, 1452, 2155, 2324
SduI	GDGCHC	7 cut(s)	541, 855, 972, 1569, 1853, 1889, 2458
SexAI	ACCWGGT	1 cut(s)	1450
SfaNI	GCATC	1 cut(s)	2035
Sfr303I	CCGCGG	1 cut(s)	1876
SfuI	TTCGAA	1 cut(s)	1629
SgrAI	CRCCGGYG	1 cut(s)	1946
SgrBI	CCGCGG	1 cut(s)	1876
SinI	GGWCC	6 cut(s)	23, 287, 1319, 1870, 2333, 2463
SmiMI	CAYNNNNRTG	4 cut(s)	461, 846, 1697, 1981
SmlI	CTYRAG	4 cut(s)	218, 398, 1880, 2457
SmoI	CTYRAG	4 cut(s)	218, 398, 1880, 2457
SpeI	ACTAGT	1 cut(s)	1816
SsiI	CCGC	6 cut(s)	64, 1623, 1873, 1875, 1918, 1921
SspMI	CTAG	4 cut(s)	47, 1037, 1817, 2117
SstI	GAGCTC	2 cut(s)	972, 2458
StyD4I	CCNGG	5 cut(s)	354, 959, 1450, 2153, 2322
StyI	CCWWGG	3 cut(s)	462, 1488, 2229
TaaI	ACNGT	8 cut(s)	676, 1089, 1588, 1663, 2020, 2201, 2480, 2486
TaiI	ACGT	6 cut(s)	267, 1449, 1800, 1833, 2054, 2294
TaqI	TCGA	5 cut(s)	344, 655, 1629, 2360, 2381
TaqII	GACCGA	3 cut(s)	275, 1977, 2350
TatI	WGTACW	4 cut(s)	817, 1084, 1663, 2127
TauI	GCSGC	3 cut(s)	67, 1878, 1923
TfiI	GAWTC	5 cut(s)	905, 1493, 1769, 2028, 2383
Tru1I	TTAA	6 cut(s)	159, 231, 551, 1800, 2177, 2373
Tru9I	TTAA	6 cut(s)	159, 231, 551, 1800, 2177, 2373
TscAI	CASTG	3 cut(s)	1227, 1376, 1681
TseFI	GTSAC	2 cut(s)	1164, 2498
TseI	GCWGC	5 cut(s)	67, 722, 1021, 1145, 1539
Tsp45I	GTSAC	2 cut(s)	1164, 2498
TspGWI	ACGGA	2 cut(s)	1001, 2088
TspRI	CASTG	3 cut(s)	1227, 1376, 1681
VneI	GTGCAC	1 cut(s)	1565
VpaK11BI	GGWCC	6 cut(s)	23, 287, 1319, 1870, 2333, 2463
XagI	CCTNNNNNAGG	1 cut(s)	1469
XapI	RAATTY	3 cut(s)	311, 2011, 2076
XbaI	TCTAGA	1 cut(s)	46
XcmI	CCANNNNNNNNNTGG	3 cut(s)	469, 807, 1448
XspI	CTAG	4 cut(s)	47, 1037, 1817, 2117
ZrmI	AGTACT	1 cut(s)	1086
Zsp2I	ATGCAT	2 cut(s)	1704, 1984

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.