Cation H( ) antiporter
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 305 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1522 |
| AccI | GTMKAC | 2 cut(s) | 2075, 2082 |
| AciI | CCGC | 3 cut(s) | 508, 1360, 2202 |
| AclI | AACGTT | 1 cut(s) | 550 |
| AclWI | GGATC | 5 cut(s) | 1269, 1310, 1408, 1421, 1881 |
| AcoI | YGGCCR | 2 cut(s) | 1545, 2023 |
| AcsI | RAATTY | 5 cut(s) | 4, 16, 311, 621, 2244 |
| AcyI | GRCGYC | 1 cut(s) | 1512 |
| AfaI | GTAC | 3 cut(s) | 474, 504, 1665 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 483, 1522, 1543, 1597, 1726 |
| AflII | CTTAAG | 1 cut(s) | 2183 |
| AflIII | ACRYGT | 1 cut(s) | 378 |
| AhlI | ACTAGT | 1 cut(s) | 1519 |
| AjnI | CCWGG | 2 cut(s) | 812, 878 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1796, 1828 |
| AleI | CACNNNNGTG | 1 cut(s) | 1679 |
| Alw21I | GWGCWC | 5 cut(s) | 830, 858, 1856, 2377, 2446 |
| Alw26I | GTCTC | 4 cut(s) | 214, 341, 1663, 2086 |
| Alw44I | GTGCAC | 1 cut(s) | 826 |
| AlwI | GGATC | 5 cut(s) | 1269, 1310, 1408, 1421, 1881 |
| Ama87I | CYCGRG | 1 cut(s) | 1242 |
| AoxI | GGCC | 4 cut(s) | 1534, 1545, 2023, 2302 |
| ApaLI | GTGCAC | 1 cut(s) | 826 |
| ApeKI | GCWGC | 3 cut(s) | 677, 1145, 1886 |
| ApoI | RAATTY | 5 cut(s) | 4, 16, 311, 621, 2244 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 558, 590, 2342, 2374 |
| AseI | ATTAAT | 2 cut(s) | 195, 741 |
| AsiSI | GCGATCGC | 1 cut(s) | 1938 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2244 |
| AspLEI | GCGC | 1 cut(s) | 231 |
| AspS9I | GGNCC | 3 cut(s) | 275, 566, 1319 |
| AsuC2I | CCSGG | 1 cut(s) | 427 |
| AvaI | CYCGRG | 1 cut(s) | 1242 |
| AvaII | GGWCC | 3 cut(s) | 275, 566, 1319 |
| BaeGI | GKGCMC | 1 cut(s) | 830 |
| BalI | TGGCCA | 1 cut(s) | 2025 |
| BamHI | GGATCC | 1 cut(s) | 1413 |
| BanII | GRGCYC | 1 cut(s) | 858 |
| BauI | CACGAG | 2 cut(s) | 206, 1592 |
| BbsI | GAAGAC | 1 cut(s) | 1954 |
| Bbv12I | GWGCWC | 5 cut(s) | 830, 858, 1856, 2377, 2446 |
| BbvCI | CCTCAGC | 1 cut(s) | 1725 |
| BbvI | GCAGC | 3 cut(s) | 689, 1157, 1873 |
| BccI | CCATC | 4 cut(s) | 55, 1778, 1919, 2011 |
| BceAI | ACGGC | 2 cut(s) | 665, 1834 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1123, 1157 |
| BciT130I | CCWGG | 2 cut(s) | 814, 880 |
| BciVI | GTATCC | 1 cut(s) | 552 |
| BcnI | CCSGG | 1 cut(s) | 427 |
| BcoDI | GTCTC | 4 cut(s) | 214, 341, 1663, 2086 |
| BcuI | ACTAGT | 1 cut(s) | 1519 |
| BfaI | CTAG | 8 cut(s) | 146, 794, 1286, 1328, 1520, 1721, 2096, 2378 |
| BfmI | CTRYAG | 4 cut(s) | 56, 351, 675, 927 |
| BfrI | CTTAAG | 1 cut(s) | 2183 |
| BfuI | GTATCC | 1 cut(s) | 552 |
| BglII | AGATCT | 1 cut(s) | 1246 |
| BisI | GCNGC | 3 cut(s) | 678, 1146, 1887 |
| BlsI | GCNGC | 3 cut(s) | 679, 1147, 1888 |
| Bme1390I | CCNGG | 3 cut(s) | 427, 814, 880 |
| Bme18I | GGWCC | 3 cut(s) | 275, 566, 1319 |
| BmeT110I | CYCGRG | 1 cut(s) | 1242 |
| BmgT120I | GGNCC | 3 cut(s) | 275, 566, 1319 |
| BmiI | GGNNCC | 4 cut(s) | 276, 1321, 1396, 1415 |
| BmrFI | CCNGG | 3 cut(s) | 427, 814, 880 |
| BmrI | ACTGGG | 1 cut(s) | 281 |
| BmsI | GCATC | 3 cut(s) | 898, 984, 1830 |
| BmuI | ACTGGG | 1 cut(s) | 281 |
| BpiI | GAAGAC | 1 cut(s) | 1954 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1022, 1725 |
| BpuEI | CTTGAG | 1 cut(s) | 620 |
| BpuMI | CCSGG | 1 cut(s) | 427 |
| BsaAI | YACGTR | 1 cut(s) | 239 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1803 |
| BsaHI | GRCGYC | 1 cut(s) | 1512 |
| BsaI | GGTCTC | 1 cut(s) | 214 |
| BsaJI | CCNNGG | 4 cut(s) | 765, 1542, 1972, 2305 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1601, 1631 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 483, 1522, 1543, 1597, 1726 |
| Bse1I | ACTGG | 3 cut(s) | 276, 413, 823 |
| Bse3DI | GCAATG | 2 cut(s) | 444, 729 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1803 |
| BseBI | CCWGG | 2 cut(s) | 814, 880 |
| BseDI | CCNNGG | 4 cut(s) | 765, 1542, 1972, 2305 |
| BseGI | GGATG | 4 cut(s) | 295, 1752, 2022, 2458 |
| BseJI | GATNNNNATC | 1 cut(s) | 1803 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 483, 1522, 1543, 1597, 1726 |
| BseMI | GCAATG | 2 cut(s) | 444, 729 |
| BseMII | CTCAG | 3 cut(s) | 209, 714, 1716 |
| BseNI | ACTGG | 3 cut(s) | 276, 413, 823 |
| BseRI | GAGGAG | 2 cut(s) | 632, 1610 |
| BseSI | GKGCMC | 1 cut(s) | 830 |
| BseXI | GCAGC | 3 cut(s) | 689, 1157, 1873 |
| BseYI | CCCAGC | 1 cut(s) | 802 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1938 |
| BshFI | GGCC | 4 cut(s) | 1536, 1547, 2025, 2304 |
| BsiEI | CGRYCG | 1 cut(s) | 1938 |
| BsiHKAI | GWGCWC | 5 cut(s) | 830, 858, 1856, 2377, 2446 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1242 |
| BsiSI | CCGG | 1 cut(s) | 426 |
| BslFI | GGGAC | 2 cut(s) | 1801, 1993 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 483, 1522, 1543, 1597, 1726 |
| BsmAI | GTCTC | 4 cut(s) | 214, 341, 1663, 2086 |
| BsmFI | GGGAC | 2 cut(s) | 1801, 1993 |
| BsmI | GAATGC | 1 cut(s) | 922 |
| BsnI | GGCC | 4 cut(s) | 1536, 1547, 2025, 2304 |
| Bso31I | GGTCTC | 1 cut(s) | 214 |
| BsoBI | CYCGRG | 1 cut(s) | 1242 |
| Bsp1286I | GDGCHC | 5 cut(s) | 830, 858, 1856, 2377, 2446 |
| Bsp1407I | TGTACA | 1 cut(s) | 1663 |
| Bsp19I | CCATGG | 1 cut(s) | 2305 |
| BspACI | CCGC | 3 cut(s) | 508, 1360, 2202 |
| BspANI | GGCC | 4 cut(s) | 1536, 1547, 2025, 2304 |
| BspCNI | CTCAG | 3 cut(s) | 210, 713, 1717 |
| BspHI | TCATGA | 2 cut(s) | 1197, 1780 |
| BspLI | GGNNCC | 4 cut(s) | 276, 1321, 1396, 1415 |
| BspMAI | CTGCAG | 2 cut(s) | 60, 679 |
| BspPI | GGATC | 5 cut(s) | 1269, 1310, 1408, 1421, 1881 |
| BspQI | GCTCTTC | 1 cut(s) | 2214 |
| BspTI | CTTAAG | 1 cut(s) | 2183 |
| BspTNI | GGTCTC | 1 cut(s) | 214 |
| BsrDI | GCAATG | 2 cut(s) | 444, 729 |
| BsrGI | TGTACA | 1 cut(s) | 1663 |
| BsrI | ACTGG | 3 cut(s) | 276, 413, 823 |
| BssECI | CCNNGG | 4 cut(s) | 765, 1542, 1972, 2305 |
| BssNI | GRCGYC | 1 cut(s) | 1512 |
| BssSI | CACGAG | 2 cut(s) | 206, 1592 |
| BssT1I | CCWWGG | 2 cut(s) | 1972, 2305 |
| Bst2BI | CACGAG | 2 cut(s) | 206, 1592 |
| Bst2UI | CCWGG | 2 cut(s) | 814, 880 |
| Bst4CI | ACNGT | 8 cut(s) | 85, 352, 1309, 1678, 2047, 2080, 2496, 2542 |
| Bst6I | CTCTTC | 3 cut(s) | 159, 1007, 2214 |
| BstACI | GRCGYC | 1 cut(s) | 1512 |
| BstAFI | CTTAAG | 1 cut(s) | 2183 |
| BstAUI | TGTACA | 1 cut(s) | 1663 |
| BstBAI | YACGTR | 1 cut(s) | 239 |
| BstC8I | GCNNGC | 9 cut(s) | 262, 457, 720, 1352, 1423, 1570, 1884, 2023, 2131 |
| BstDEI | CTNAG | 7 cut(s) | 218, 343, 440, 700, 1022, 1232, 1725 |
| BstDSI | CCRYGG | 1 cut(s) | 2305 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1724 |
| BstF5I | GGATG | 4 cut(s) | 295, 1752, 2022, 2458 |
| BstHHI | GCGC | 1 cut(s) | 231 |
| BstMAI | GTCTC | 4 cut(s) | 214, 341, 1663, 2086 |
| BstMCI | CGRYCG | 1 cut(s) | 1938 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 614, 674, 776, 1118, 1558, 1578, 1587, 2062 |
| BstNI | CCWGG | 2 cut(s) | 814, 880 |
| BstNSI | RCATGY | 5 cut(s) | 382, 915, 1425, 1893, 2486 |
| BstSCI | CCNGG | 3 cut(s) | 425, 812, 878 |
| BstSFI | CTRYAG | 4 cut(s) | 56, 351, 675, 927 |
| BstSLI | GKGCMC | 1 cut(s) | 830 |
| BstV1I | GCAGC | 3 cut(s) | 689, 1157, 1873 |
| BstV2I | GAAGAC | 1 cut(s) | 1954 |
| BstX2I | RGATCY | 2 cut(s) | 1246, 1413 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1508 |
| BstYI | RGATCY | 2 cut(s) | 1246, 1413 |
| BsuI | GTATCC | 1 cut(s) | 552 |
| BsuRI | GGCC | 4 cut(s) | 1536, 1547, 2025, 2304 |
| BtgI | CCRYGG | 1 cut(s) | 2305 |
| BtgZI | GCGATG | 1 cut(s) | 1571 |
| BtsCI | GGATG | 4 cut(s) | 295, 1752, 2022, 2458 |
| BtsIMutI | CAGTG | 2 cut(s) | 830, 2547 |
| Cac8I | GCNNGC | 9 cut(s) | 262, 457, 720, 1352, 1423, 1570, 1884, 2023, 2131 |
| CciI | TCATGA | 2 cut(s) | 1197, 1780 |
| CfoI | GCGC | 1 cut(s) | 231 |
| Cfr13I | GGNCC | 3 cut(s) | 275, 566, 1319 |
| CseI | GACGC | 2 cut(s) | 1501, 1574 |
| Csp6I | GTAC | 3 cut(s) | 473, 503, 1664 |
| CviQI | GTAC | 3 cut(s) | 473, 503, 1664 |
| DdeI | CTNAG | 7 cut(s) | 218, 343, 440, 700, 1022, 1232, 1725 |
| DraI | TTTAAA | 2 cut(s) | 97, 1437 |
| EaeI | YGGCCR | 2 cut(s) | 1545, 2023 |
| Eam1104I | CTCTTC | 3 cut(s) | 159, 1007, 2214 |
| EarI | CTCTTC | 3 cut(s) | 159, 1007, 2214 |
| Ecl136II | GAGCTC | 1 cut(s) | 856 |
| Eco130I | CCWWGG | 2 cut(s) | 1972, 2305 |
| Eco24I | GRGCYC | 1 cut(s) | 858 |
| Eco31I | GGTCTC | 1 cut(s) | 214 |
| Eco47I | GGWCC | 3 cut(s) | 275, 566, 1319 |
| Eco53kI | GAGCTC | 1 cut(s) | 856 |
| Eco88I | CYCGRG | 1 cut(s) | 1242 |
| EcoICRI | GAGCTC | 1 cut(s) | 856 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1724 |
| EcoO109I | RGGNCCY | 1 cut(s) | 566 |
| EcoRI | GAATTC | 3 cut(s) | 4, 16, 621 |
| EcoRII | CCWGG | 2 cut(s) | 812, 878 |
| EcoT14I | CCWWGG | 2 cut(s) | 1972, 2305 |
| EcoT22I | ATGCAT | 4 cut(s) | 913, 1704, 2011, 2168 |
| EcoT38I | GRGCYC | 1 cut(s) | 858 |
| ErhI | CCWWGG | 2 cut(s) | 1972, 2305 |
| FaqI | GGGAC | 2 cut(s) | 1801, 1993 |
| FauI | CCCGC | 1 cut(s) | 1367 |
| FauNDI | CATATG | 2 cut(s) | 1712, 2005 |
| FblI | GTMKAC | 2 cut(s) | 2075, 2082 |
| Fnu4HI | GCNGC | 3 cut(s) | 678, 1146, 1887 |
| FokI | GGATG | 4 cut(s) | 282, 1739, 2029, 2465 |
| FriOI | GRGCYC | 1 cut(s) | 858 |
| Fsp4HI | GCNGC | 3 cut(s) | 678, 1146, 1887 |
| FspBI | CTAG | 8 cut(s) | 146, 794, 1286, 1328, 1520, 1721, 2096, 2378 |
| GlaI | GCGC | 1 cut(s) | 230 |
| GluI | GCNGC | 3 cut(s) | 678, 1146, 1887 |
| GsaI | CCCAGC | 1 cut(s) | 806 |
| HaeIII | GGCC | 4 cut(s) | 1536, 1547, 2025, 2304 |
| HapII | CCGG | 1 cut(s) | 426 |
| HgaI | GACGC | 2 cut(s) | 1501, 1574 |
| HhaI | GCGC | 1 cut(s) | 231 |
| Hin1I | GRCGYC | 1 cut(s) | 1512 |
| Hin6I | GCGC | 1 cut(s) | 229 |
| HinP1I | GCGC | 1 cut(s) | 229 |
| HincII | GTYRAC | 4 cut(s) | 339, 762, 1741, 2076 |
| HindII | GTYRAC | 4 cut(s) | 339, 762, 1741, 2076 |
| HindIII | AAGCTT | 1 cut(s) | 949 |
| HinfI | GANTC | 6 cut(s) | 149, 511, 897, 1191, 1799, 2035 |
| HpaI | GTTAAC | 1 cut(s) | 1741 |
| HpaII | CCGG | 1 cut(s) | 426 |
| Hpy166II | GTNNAC | 7 cut(s) | 339, 373, 762, 828, 1741, 2076, 2083 |
| Hpy188I | TCNGA | 6 cut(s) | 31, 410, 652, 691, 1041, 1413 |
| Hpy188III | TCNNGA | 7 cut(s) | 217, 1172, 1198, 1244, 1781, 1991, 2400 |
| Hpy8I | GTNNAC | 7 cut(s) | 339, 373, 762, 828, 1741, 2076, 2083 |
| Hpy99I | CGWCG | 6 cut(s) | 482, 2077, 2092, 2351, 2354, 2357 |
| HpyAV | CCTTC | 8 cut(s) | 427, 526, 1333, 1342, 1818, 2113, 2264, 2332 |
| HpyCH4III | ACNGT | 8 cut(s) | 85, 352, 1309, 1678, 2047, 2080, 2496, 2542 |
| HpyCH4IV | ACGT | 4 cut(s) | 238, 550, 1790, 2072 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 614, 674, 776, 1118, 1558, 1578, 1587, 2062 |
| HpyF3I | CTNAG | 7 cut(s) | 218, 343, 440, 700, 1022, 1232, 1725 |
| HpySE526I | ACGT | 4 cut(s) | 238, 550, 1790, 2072 |
| Hsp92I | GRCGYC | 1 cut(s) | 1512 |
| HspAI | GCGC | 1 cut(s) | 229 |
| KspAI | GTTAAC | 1 cut(s) | 1741 |
| LguI | GCTCTTC | 1 cut(s) | 2214 |
| LmnI | GCTCC | 6 cut(s) | 645, 861, 935, 2262, 2372, 2449 |
| Lsp1109I | GCAGC | 3 cut(s) | 689, 1157, 1873 |
| LweI | GCATC | 3 cut(s) | 898, 984, 1830 |
| MaeI | CTAG | 8 cut(s) | 146, 794, 1286, 1328, 1520, 1721, 2096, 2378 |
| MaeII | ACGT | 4 cut(s) | 238, 550, 1790, 2072 |
| MaeIII | GTNAC | 3 cut(s) | 79, 89, 1904 |
| MflI | RGATCY | 2 cut(s) | 1246, 1413 |
| MhlI | GDGCHC | 5 cut(s) | 830, 858, 1856, 2377, 2446 |
| MlsI | TGGCCA | 1 cut(s) | 2025 |
| MluNI | TGGCCA | 1 cut(s) | 2025 |
| MlyI | GAGTC | 1 cut(s) | 1200 |
| MmeI | TCCRAC | 5 cut(s) | 302, 714, 1297, 1372, 1540 |
| Mox20I | TGGCCA | 1 cut(s) | 2025 |
| Mph1103I | ATGCAT | 4 cut(s) | 913, 1704, 2011, 2168 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2244 |
| MscI | TGGCCA | 1 cut(s) | 2025 |
| MseI | TTAA | 9 cut(s) | 96, 195, 741, 1151, 1436, 1740, 2000, 2184, 2258 |
| MslI | CAYNNNNRTG | 4 cut(s) | 498, 992, 1679, 2008 |
| Msp20I | TGGCCA | 1 cut(s) | 2025 |
| MspA1I | CMGCKG | 1 cut(s) | 175 |
| MspCI | CTTAAG | 1 cut(s) | 2183 |
| MspI | CCGG | 1 cut(s) | 426 |
| MspR9I | CCNGG | 3 cut(s) | 427, 814, 880 |
| Mva1269I | GAATGC | 1 cut(s) | 922 |
| MvaI | CCWGG | 2 cut(s) | 814, 880 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 614, 674, 776, 1118, 1558, 1578, 1587, 2062 |
| NciI | CCSGG | 1 cut(s) | 427 |
| NcoI | CCATGG | 1 cut(s) | 2305 |
| NdeI | CATATG | 2 cut(s) | 1712, 2005 |
| NlaIV | GGNNCC | 4 cut(s) | 276, 1321, 1396, 1415 |
| NmeAIII | GCCGAG | 2 cut(s) | 746, 1523 |
| NmuCI | GTSAC | 1 cut(s) | 79 |
| NsiI | ATGCAT | 4 cut(s) | 913, 1704, 2011, 2168 |
| NspI | RCATGY | 5 cut(s) | 382, 915, 1425, 1893, 2486 |
| OliI | CACNNNNGTG | 1 cut(s) | 1679 |
| PaeI | GCATGC | 1 cut(s) | 1425 |
| PaeR7I | CTCGAG | 1 cut(s) | 1242 |
| PagI | TCATGA | 2 cut(s) | 1197, 1780 |
| PciI | ACATGT | 1 cut(s) | 378 |
| PciSI | GCTCTTC | 1 cut(s) | 2214 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2352 |
| PctI | GAATGC | 1 cut(s) | 922 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2244 |
| PfeI | GAWTC | 5 cut(s) | 149, 511, 897, 1799, 2035 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1522 |
| PfoI | TCCNGGA | 1 cut(s) | 812 |
| PkrI | GCNGC | 3 cut(s) | 679, 1147, 1888 |
| Ple19I | CGATCG | 1 cut(s) | 1938 |
| PleI | GAGTC | 1 cut(s) | 1199 |
| PpsI | GAGTC | 1 cut(s) | 1199 |
| Ppu21I | YACGTR | 1 cut(s) | 239 |
| PpuMI | RGGWCCY | 1 cut(s) | 566 |
| PscI | ACATGT | 1 cut(s) | 378 |
| PshBI | ATTAAT | 2 cut(s) | 195, 741 |
| PsiI | TTATAA | 1 cut(s) | 305 |
| Psp124BI | GAGCTC | 1 cut(s) | 858 |
| Psp1406I | AACGTT | 1 cut(s) | 550 |
| Psp5II | RGGWCCY | 1 cut(s) | 566 |
| Psp6I | CCWGG | 2 cut(s) | 812, 878 |
| PspFI | CCCAGC | 1 cut(s) | 802 |
| PspGI | CCWGG | 2 cut(s) | 812, 878 |
| PspN4I | GGNNCC | 4 cut(s) | 276, 1321, 1396, 1415 |
| PspPI | GGNCC | 3 cut(s) | 275, 566, 1319 |
| PspPPI | RGGWCCY | 1 cut(s) | 566 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 780, 812 |
| PstI | CTGCAG | 2 cut(s) | 60, 679 |
| PsuI | RGATCY | 2 cut(s) | 1246, 1413 |
| PvuI | CGATCG | 1 cut(s) | 1938 |
| PvuII | CAGCTG | 1 cut(s) | 175 |
| RgaI | GCGATCGC | 1 cut(s) | 1938 |
| RsaI | GTAC | 3 cut(s) | 474, 504, 1665 |
| RsaNI | GTAC | 3 cut(s) | 473, 503, 1664 |
| RseI | CAYNNNNRTG | 4 cut(s) | 498, 992, 1679, 2008 |
| SacI | GAGCTC | 1 cut(s) | 858 |
| SalI | GTCGAC | 1 cut(s) | 2074 |
| SapI | GCTCTTC | 1 cut(s) | 2214 |
| SaqAI | TTAA | 9 cut(s) | 96, 195, 741, 1151, 1436, 1740, 2000, 2184, 2258 |
| SatI | GCNGC | 3 cut(s) | 678, 1146, 1887 |
| Sau96I | GGNCC | 3 cut(s) | 275, 566, 1319 |
| SchI | GAGTC | 1 cut(s) | 1200 |
| ScrFI | CCNGG | 3 cut(s) | 427, 814, 880 |
| SduI | GDGCHC | 5 cut(s) | 830, 858, 1856, 2377, 2446 |
| SfaAI | GCGATCGC | 1 cut(s) | 1938 |
| SfaNI | GCATC | 3 cut(s) | 898, 984, 1830 |
| SfcI | CTRYAG | 4 cut(s) | 56, 351, 675, 927 |
| Sfr274I | CTCGAG | 1 cut(s) | 1242 |
| SgfI | GCGATCGC | 1 cut(s) | 1938 |
| SinI | GGWCC | 3 cut(s) | 275, 566, 1319 |
| SlaI | CTCGAG | 1 cut(s) | 1242 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 498, 992, 1679, 2008 |
| SmlI | CTYRAG | 3 cut(s) | 635, 1242, 2183 |
| SmoI | CTYRAG | 3 cut(s) | 635, 1242, 2183 |
| SpeI | ACTAGT | 1 cut(s) | 1519 |
| SphI | GCATGC | 1 cut(s) | 1425 |
| SsiI | CCGC | 3 cut(s) | 508, 1360, 2202 |
| SspI | AATATT | 1 cut(s) | 1899 |
| SspMI | CTAG | 8 cut(s) | 146, 794, 1286, 1328, 1520, 1721, 2096, 2378 |
| SstI | GAGCTC | 1 cut(s) | 858 |
| StyD4I | CCNGG | 3 cut(s) | 425, 812, 878 |
| StyI | CCWWGG | 2 cut(s) | 1972, 2305 |
| TaaI | ACNGT | 8 cut(s) | 85, 352, 1309, 1678, 2047, 2080, 2496, 2542 |
| TaiI | ACGT | 4 cut(s) | 241, 553, 1793, 2075 |
| TaqI | TCGA | 9 cut(s) | 23, 619, 1086, 1171, 1243, 1839, 1990, 2075, 2399 |
| TaqII | GACCGA | 1 cut(s) | 2489 |
| TatI | WGTACW | 2 cut(s) | 502, 1663 |
| TfiI | GAWTC | 5 cut(s) | 149, 511, 897, 1799, 2035 |
| Tru1I | TTAA | 9 cut(s) | 96, 195, 741, 1151, 1436, 1740, 2000, 2184, 2258 |
| Tru9I | TTAA | 9 cut(s) | 96, 195, 741, 1151, 1436, 1740, 2000, 2184, 2258 |
| TscAI | CASTG | 2 cut(s) | 830, 2547 |
| TseFI | GTSAC | 1 cut(s) | 79 |
| TseI | GCWGC | 3 cut(s) | 677, 1145, 1886 |
| Tsp45I | GTSAC | 1 cut(s) | 79 |
| TspGWI | ACGGA | 1 cut(s) | 1614 |
| TspRI | CASTG | 2 cut(s) | 830, 2547 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1522 |
| Vha464I | CTTAAG | 1 cut(s) | 2183 |
| VneI | GTGCAC | 1 cut(s) | 826 |
| VpaK11BI | GGWCC | 3 cut(s) | 275, 566, 1319 |
| VspI | ATTAAT | 2 cut(s) | 195, 741 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1724 |
| XapI | RAATTY | 5 cut(s) | 4, 16, 311, 621, 2244 |
| XceI | RCATGY | 5 cut(s) | 382, 915, 1425, 1893, 2486 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 653, 810, 1213 |
| XhoI | CTCGAG | 1 cut(s) | 1242 |
| XmiI | GTMKAC | 2 cut(s) | 2075, 2082 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2244 |
| XspI | CTAG | 8 cut(s) | 146, 794, 1286, 1328, 1520, 1721, 2096, 2378 |
| Zsp2I | ATGCAT | 4 cut(s) | 913, 1704, 2011, 2168 |