Cation H( ) antiporter
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 299 |
| AatII | GACGTC | 1 cut(s) | 761 |
| AccII | CGCG | 1 cut(s) | 2474 |
| AciI | CCGC | 9 cut(s) | 103, 502, 1631, 1950, 2051, 2232, 2331, 2472, 2474 |
| AclI | AACGTT | 2 cut(s) | 1059, 1381 |
| AclWI | GGATC | 6 cut(s) | 1296, 1337, 1441, 1454, 1914, 1960 |
| AcoI | YGGCCR | 2 cut(s) | 1567, 1578 |
| AcsI | RAATTY | 4 cut(s) | 142, 2163, 2274, 2377 |
| AcuI | CTGAAG | 1 cut(s) | 650 |
| AcyI | GRCGYC | 1 cut(s) | 758 |
| AfaI | GTAC | 7 cut(s) | 156, 468, 498, 813, 1367, 1698, 2238 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 477, 1576, 1759, 2403 |
| AflII | CTTAAG | 1 cut(s) | 2213 |
| AflIII | ACRYGT | 2 cut(s) | 372, 687 |
| AgeI | ACCGGT | 1 cut(s) | 406 |
| AjnI | CCWGG | 4 cut(s) | 556, 1119, 2457, 2480 |
| AleI | CACNNNNGTG | 2 cut(s) | 1712, 2445 |
| Alw21I | GWGCWC | 3 cut(s) | 916, 972, 1889 |
| Alw26I | GTCTC | 1 cut(s) | 335 |
| Alw44I | GTGCAC | 2 cut(s) | 912, 1885 |
| AlwI | GGATC | 6 cut(s) | 1296, 1337, 1441, 1454, 1914, 1960 |
| Ama87I | CYCGRG | 1 cut(s) | 1269 |
| AoxI | GGCC | 6 cut(s) | 481, 1567, 1578, 2009, 2307, 2405 |
| ApaLI | GTGCAC | 2 cut(s) | 912, 1885 |
| ApeKI | GCWGC | 3 cut(s) | 671, 1172, 1919 |
| ApoI | RAATTY | 4 cut(s) | 142, 2163, 2274, 2377 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 552, 584 |
| AsiGI | ACCGGT | 1 cut(s) | 406 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2274 |
| AspLEI | GCGC | 2 cut(s) | 225, 947 |
| AspS9I | GGNCC | 6 cut(s) | 269, 481, 560, 1346, 2009, 2405 |
| AsuC2I | CCSGG | 1 cut(s) | 421 |
| AsuHPI | GGTGA | 2 cut(s) | 1872, 2476 |
| AvaI | CYCGRG | 1 cut(s) | 1269 |
| AvaII | GGWCC | 3 cut(s) | 269, 560, 1346 |
| BaeGI | GKGCMC | 2 cut(s) | 916, 1889 |
| BamHI | GGATCC | 1 cut(s) | 1446 |
| BanII | GRGCYC | 1 cut(s) | 972 |
| BauI | CACGAG | 1 cut(s) | 2417 |
| BbsI | GAAGAC | 1 cut(s) | 196 |
| Bbv12I | GWGCWC | 3 cut(s) | 916, 972, 1889 |
| BbvCI | CCTCAGC | 1 cut(s) | 1758 |
| BbvI | GCAGC | 3 cut(s) | 683, 1159, 1906 |
| BccI | CCATC | 5 cut(s) | 104, 1358, 1542, 1811, 2041 |
| BceAI | ACGGC | 3 cut(s) | 428, 1529, 2318 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 427, 461, 565, 599, 2466, 2500 |
| BciT130I | CCWGG | 4 cut(s) | 558, 1121, 2459, 2482 |
| BclI | TGATCA | 1 cut(s) | 1314 |
| BcnI | CCSGG | 1 cut(s) | 421 |
| BcoDI | GTCTC | 1 cut(s) | 335 |
| BfaI | CTAG | 7 cut(s) | 608, 965, 1355, 1611, 1754, 2097, 2126 |
| BfmI | CTRYAG | 4 cut(s) | 50, 345, 669, 921 |
| BfoI | RGCGCY | 1 cut(s) | 948 |
| BfrI | CTTAAG | 1 cut(s) | 2213 |
| BglII | AGATCT | 3 cut(s) | 625, 1273, 2384 |
| BisI | GCNGC | 5 cut(s) | 103, 672, 1173, 1920, 2475 |
| BlsI | GCNGC | 5 cut(s) | 104, 673, 1174, 1921, 2476 |
| Bme1390I | CCNGG | 5 cut(s) | 421, 558, 1121, 2459, 2482 |
| Bme18I | GGWCC | 3 cut(s) | 269, 560, 1346 |
| BmeT110I | CYCGRG | 1 cut(s) | 1269 |
| BmgT120I | GGNCC | 6 cut(s) | 269, 481, 560, 1346, 2009, 2405 |
| BmiI | GGNNCC | 6 cut(s) | 270, 482, 506, 1348, 1423, 1448 |
| BmrFI | CCNGG | 5 cut(s) | 421, 558, 1121, 2459, 2482 |
| BmsI | GCATC | 5 cut(s) | 447, 892, 1011, 1863, 2432 |
| BpiI | GAAGAC | 1 cut(s) | 196 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1758 |
| BpuEI | CTTGAG | 1 cut(s) | 1870 |
| BpuMI | CCSGG | 1 cut(s) | 421 |
| Bsa29I | ATCGAT | 1 cut(s) | 291 |
| BsaAI | YACGTR | 4 cut(s) | 154, 233, 416, 1365 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1836 |
| BsaHI | GRCGYC | 1 cut(s) | 758 |
| BsaJI | CCNNGG | 6 cut(s) | 957, 1575, 2002, 2304, 2457, 2472 |
| BsaWI | WCCGGW | 1 cut(s) | 406 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1634, 1664 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 477, 1576, 1759, 2403 |
| Bse118I | RCCGGY | 2 cut(s) | 406, 1565 |
| Bse3DI | GCAATG | 2 cut(s) | 112, 723 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1836 |
| BseBI | CCWGG | 4 cut(s) | 558, 1121, 2459, 2482 |
| BseCI | ATCGAT | 1 cut(s) | 291 |
| BseDI | CCNNGG | 6 cut(s) | 957, 1575, 2002, 2304, 2457, 2472 |
| BseGI | GGATG | 6 cut(s) | 538, 1350, 1785, 1827, 2052, 2206 |
| BseJI | GATNNNNATC | 1 cut(s) | 1836 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 477, 1576, 1759, 2403 |
| BseMI | GCAATG | 2 cut(s) | 112, 723 |
| BseMII | CTCAG | 5 cut(s) | 226, 636, 708, 1273, 1749 |
| BseRI | GAGGAG | 3 cut(s) | 200, 626, 1983 |
| BseSI | GKGCMC | 2 cut(s) | 916, 1889 |
| BseXI | GCAGC | 3 cut(s) | 683, 1159, 1906 |
| BseYI | CCCAGC | 2 cut(s) | 265, 796 |
| Bsh1236I | CGCG | 1 cut(s) | 2474 |
| BshFI | GGCC | 6 cut(s) | 483, 1569, 1580, 2011, 2309, 2407 |
| BshTI | ACCGGT | 1 cut(s) | 406 |
| BshVI | ATCGAT | 1 cut(s) | 291 |
| BsiHKAI | GWGCWC | 3 cut(s) | 916, 972, 1889 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1269 |
| BsiSI | CCGG | 3 cut(s) | 407, 420, 1566 |
| BslFI | GGGAC | 1 cut(s) | 2067 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 477, 1576, 1759, 2403 |
| BsmAI | GTCTC | 1 cut(s) | 335 |
| BsmFI | GGGAC | 1 cut(s) | 2067 |
| BsmI | GAATGC | 2 cut(s) | 453, 1774 |
| BsnI | GGCC | 6 cut(s) | 483, 1569, 1580, 2011, 2309, 2407 |
| BsoBI | CYCGRG | 1 cut(s) | 1269 |
| Bsp1286I | GDGCHC | 3 cut(s) | 916, 972, 1889 |
| Bsp1407I | TGTACA | 1 cut(s) | 1696 |
| BspACI | CCGC | 9 cut(s) | 103, 502, 1631, 1950, 2051, 2232, 2331, 2472, 2474 |
| BspANI | GGCC | 6 cut(s) | 483, 1569, 1580, 2011, 2309, 2407 |
| BspCNI | CTCAG | 5 cut(s) | 225, 637, 707, 1272, 1750 |
| BspDI | ATCGAT | 1 cut(s) | 291 |
| BspFNI | CGCG | 1 cut(s) | 2474 |
| BspHI | TCATGA | 1 cut(s) | 1224 |
| BspLI | GGNNCC | 6 cut(s) | 270, 482, 506, 1348, 1423, 1448 |
| BspMAI | CTGCAG | 1 cut(s) | 673 |
| BspPI | GGATC | 6 cut(s) | 1296, 1337, 1441, 1454, 1914, 1960 |
| BspTI | CTTAAG | 1 cut(s) | 2213 |
| BsrDI | GCAATG | 2 cut(s) | 112, 723 |
| BsrFI | RCCGGY | 2 cut(s) | 406, 1565 |
| BsrGI | TGTACA | 1 cut(s) | 1696 |
| BssAI | RCCGGY | 2 cut(s) | 406, 1565 |
| BssECI | CCNNGG | 6 cut(s) | 957, 1575, 2002, 2304, 2457, 2472 |
| BssNI | GRCGYC | 1 cut(s) | 758 |
| BssSI | CACGAG | 1 cut(s) | 2417 |
| BssT1I | CCWWGG | 2 cut(s) | 957, 2002 |
| Bst2BI | CACGAG | 1 cut(s) | 2417 |
| Bst2UI | CCWGG | 4 cut(s) | 558, 1121, 2459, 2482 |
| Bst4CI | ACNGT | 7 cut(s) | 79, 1468, 1711, 1884, 1891, 2077, 2398 |
| Bst6I | CTCTTC | 2 cut(s) | 153, 1034 |
| BstACI | GRCGYC | 1 cut(s) | 758 |
| BstAFI | CTTAAG | 1 cut(s) | 2213 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 911 |
| BstAUI | TGTACA | 1 cut(s) | 1696 |
| BstBAI | YACGTR | 4 cut(s) | 154, 233, 416, 1365 |
| BstC8I | GCNNGC | 5 cut(s) | 451, 485, 1456, 1603, 1917 |
| BstDEI | CTNAG | 8 cut(s) | 212, 434, 645, 694, 869, 1259, 1758, 2362 |
| BstDSI | CCRYGG | 1 cut(s) | 2472 |
| BstEII | GGTNACC | 1 cut(s) | 1987 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1757 |
| BstF5I | GGATG | 6 cut(s) | 538, 1350, 1785, 1827, 2052, 2206 |
| BstFNI | CGCG | 1 cut(s) | 2474 |
| BstH2I | RGCGCY | 1 cut(s) | 948 |
| BstHHI | GCGC | 2 cut(s) | 225, 947 |
| BstMAI | GTCTC | 1 cut(s) | 335 |
| BstNI | CCWGG | 4 cut(s) | 558, 1121, 2459, 2482 |
| BstNSI | RCATGY | 6 cut(s) | 376, 691, 909, 1458, 1926, 2319 |
| BstPI | GGTNACC | 1 cut(s) | 1987 |
| BstSCI | CCNGG | 5 cut(s) | 419, 556, 1119, 2457, 2480 |
| BstSFI | CTRYAG | 4 cut(s) | 50, 345, 669, 921 |
| BstSLI | GKGCMC | 2 cut(s) | 916, 1889 |
| BstUI | CGCG | 1 cut(s) | 2474 |
| BstV1I | GCAGC | 3 cut(s) | 683, 1159, 1906 |
| BstV2I | GAAGAC | 1 cut(s) | 196 |
| BstX2I | RGATCY | 5 cut(s) | 625, 1273, 1446, 1952, 2384 |
| BstYI | RGATCY | 5 cut(s) | 625, 1273, 1446, 1952, 2384 |
| Bsu15I | ATCGAT | 1 cut(s) | 291 |
| BsuRI | GGCC | 6 cut(s) | 483, 1569, 1580, 2011, 2309, 2407 |
| BsuTUI | ATCGAT | 1 cut(s) | 291 |
| BtgI | CCRYGG | 1 cut(s) | 2472 |
| BtgZI | GCGATG | 2 cut(s) | 424, 1604 |
| BtsCI | GGATG | 6 cut(s) | 538, 1350, 1785, 1827, 2052, 2206 |
| BtsIMutI | CAGTG | 2 cut(s) | 15, 1464 |
| Cac8I | GCNNGC | 5 cut(s) | 451, 485, 1456, 1603, 1917 |
| CciI | TCATGA | 1 cut(s) | 1224 |
| CfoI | GCGC | 2 cut(s) | 225, 947 |
| Cfr10I | RCCGGY | 2 cut(s) | 406, 1565 |
| Cfr13I | GGNCC | 6 cut(s) | 269, 481, 560, 1346, 2009, 2405 |
| Cfr42I | CCGCGG | 1 cut(s) | 2475 |
| ClaI | ATCGAT | 1 cut(s) | 291 |
| CseI | GACGC | 2 cut(s) | 1607, 1662 |
| CsiI | ACCWGGT | 1 cut(s) | 2480 |
| Csp6I | GTAC | 7 cut(s) | 155, 467, 497, 812, 1366, 1697, 2237 |
| CspAI | ACCGGT | 1 cut(s) | 406 |
| CviQI | GTAC | 7 cut(s) | 155, 467, 497, 812, 1366, 1697, 2237 |
| DdeI | CTNAG | 8 cut(s) | 212, 434, 645, 694, 869, 1259, 1758, 2362 |
| EaeI | YGGCCR | 2 cut(s) | 1567, 1578 |
| Eam1104I | CTCTTC | 2 cut(s) | 153, 1034 |
| EarI | CTCTTC | 2 cut(s) | 153, 1034 |
| Ecl136II | GAGCTC | 1 cut(s) | 970 |
| Eco130I | CCWWGG | 2 cut(s) | 957, 2002 |
| Eco147I | AGGCCT | 1 cut(s) | 2309 |
| Eco24I | GRGCYC | 1 cut(s) | 972 |
| Eco32I | GATATC | 1 cut(s) | 44 |
| Eco47I | GGWCC | 3 cut(s) | 269, 560, 1346 |
| Eco53kI | GAGCTC | 1 cut(s) | 970 |
| Eco57I | CTGAAG | 1 cut(s) | 650 |
| Eco88I | CYCGRG | 1 cut(s) | 1269 |
| Eco91I | GGTNACC | 1 cut(s) | 1987 |
| EcoICRI | GAGCTC | 1 cut(s) | 970 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1757 |
| EcoO109I | RGGNCCY | 3 cut(s) | 269, 481, 560 |
| EcoO65I | GGTNACC | 1 cut(s) | 1987 |
| EcoRII | CCWGG | 4 cut(s) | 556, 1119, 2457, 2480 |
| EcoRV | GATATC | 1 cut(s) | 44 |
| EcoT14I | CCWWGG | 2 cut(s) | 957, 2002 |
| EcoT22I | ATGCAT | 4 cut(s) | 907, 1737, 2041, 2321 |
| EcoT38I | GRGCYC | 1 cut(s) | 972 |
| ErhI | CCWWGG | 2 cut(s) | 957, 2002 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1976, 2008 |
| FaqI | GGGAC | 1 cut(s) | 2067 |
| FauI | CCCGC | 1 cut(s) | 2044 |
| FauNDI | CATATG | 2 cut(s) | 1745, 2035 |
| FbaI | TGATCA | 1 cut(s) | 1314 |
| Fnu4HI | GCNGC | 5 cut(s) | 103, 672, 1173, 1920, 2475 |
| FokI | GGATG | 6 cut(s) | 545, 1337, 1772, 1834, 2059, 2213 |
| FriOI | GRGCYC | 1 cut(s) | 972 |
| Fsp4HI | GCNGC | 5 cut(s) | 103, 672, 1173, 1920, 2475 |
| FspBI | CTAG | 7 cut(s) | 608, 965, 1355, 1611, 1754, 2097, 2126 |
| GlaI | GCGC | 2 cut(s) | 224, 946 |
| GluI | GCNGC | 5 cut(s) | 103, 672, 1173, 1920, 2475 |
| GsaI | CCCAGC | 2 cut(s) | 269, 800 |
| HaeII | RGCGCY | 1 cut(s) | 948 |
| HaeIII | GGCC | 6 cut(s) | 483, 1569, 1580, 2011, 2309, 2407 |
| HapII | CCGG | 3 cut(s) | 407, 420, 1566 |
| HgaI | GACGC | 2 cut(s) | 1607, 1662 |
| HhaI | GCGC | 2 cut(s) | 225, 947 |
| Hin1I | GRCGYC | 1 cut(s) | 758 |
| Hin6I | GCGC | 2 cut(s) | 223, 945 |
| HinP1I | GCGC | 2 cut(s) | 223, 945 |
| HincII | GTYRAC | 1 cut(s) | 333 |
| HindII | GTYRAC | 1 cut(s) | 333 |
| HindIII | AAGCTT | 1 cut(s) | 976 |
| HinfI | GANTC | 5 cut(s) | 615, 891, 1218, 1837, 2065 |
| HpaII | CCGG | 3 cut(s) | 407, 420, 1566 |
| HphI | GGTGA | 2 cut(s) | 1872, 2476 |
| Hpy166II | GTNNAC | 5 cut(s) | 58, 333, 367, 914, 1887 |
| Hpy188I | TCNGA | 9 cut(s) | 215, 404, 630, 646, 653, 685, 1068, 1446, 2493 |
| Hpy188III | TCNNGA | 6 cut(s) | 1199, 1225, 1271, 1849, 2021, 2382 |
| Hpy8I | GTNNAC | 5 cut(s) | 58, 333, 367, 914, 1887 |
| Hpy99I | CGWCG | 3 cut(s) | 449, 476, 1678 |
| HpyAV | CCTTC | 4 cut(s) | 282, 421, 520, 1851 |
| HpyCH4III | ACNGT | 7 cut(s) | 79, 1468, 1711, 1884, 1891, 2077, 2398 |
| HpyF3I | CTNAG | 8 cut(s) | 212, 434, 645, 694, 869, 1259, 1758, 2362 |
| Hsp92I | GRCGYC | 1 cut(s) | 758 |
| HspAI | GCGC | 2 cut(s) | 223, 945 |
| Ksp22I | TGATCA | 1 cut(s) | 1314 |
| KspI | CCGCGG | 1 cut(s) | 2475 |
| LmnI | GCTCC | 4 cut(s) | 541, 639, 929, 1558 |
| Lsp1109I | GCAGC | 3 cut(s) | 683, 1159, 1906 |
| LweI | GCATC | 5 cut(s) | 447, 892, 1011, 1863, 2432 |
| MabI | ACCWGGT | 1 cut(s) | 2480 |
| MaeI | CTAG | 7 cut(s) | 608, 965, 1355, 1611, 1754, 2097, 2126 |
| MaeIII | GTNAC | 6 cut(s) | 73, 1468, 1937, 1987, 2447, 2464 |
| MboII | GAAGA | 7 cut(s) | 140, 196, 436, 1021, 1096, 2261, 2282 |
| MfeI | CAATTG | 1 cut(s) | 736 |
| MflI | RGATCY | 5 cut(s) | 625, 1273, 1446, 1952, 2384 |
| MhlI | GDGCHC | 3 cut(s) | 916, 972, 1889 |
| MlyI | GAGTC | 1 cut(s) | 1227 |
| MmeI | TCCRAC | 3 cut(s) | 708, 1324, 1399 |
| Mph1103I | ATGCAT | 4 cut(s) | 907, 1737, 2041, 2321 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2274 |
| MseI | TTAA | 9 cut(s) | 189, 729, 1049, 1178, 1182, 1191, 1208, 2214, 2288 |
| MslI | CAYNNNNRTG | 4 cut(s) | 492, 1019, 1712, 2445 |
| MspA1I | CMGCKG | 5 cut(s) | 169, 674, 1950, 2234, 2474 |
| MspCI | CTTAAG | 1 cut(s) | 2213 |
| MspI | CCGG | 3 cut(s) | 407, 420, 1566 |
| MspR9I | CCNGG | 5 cut(s) | 421, 558, 1121, 2459, 2482 |
| MunI | CAATTG | 1 cut(s) | 736 |
| Mva1269I | GAATGC | 2 cut(s) | 453, 1774 |
| MvaI | CCWGG | 4 cut(s) | 558, 1121, 2459, 2482 |
| MvnI | CGCG | 1 cut(s) | 2474 |
| NciI | CCSGG | 1 cut(s) | 421 |
| NdeI | CATATG | 2 cut(s) | 1745, 2035 |
| NlaIV | GGNNCC | 6 cut(s) | 270, 482, 506, 1348, 1423, 1448 |
| NmeAIII | GCCGAG | 2 cut(s) | 1556, 2329 |
| NmuCI | GTSAC | 3 cut(s) | 73, 2447, 2464 |
| NsiI | ATGCAT | 4 cut(s) | 907, 1737, 2041, 2321 |
| NspI | RCATGY | 6 cut(s) | 376, 691, 909, 1458, 1926, 2319 |
| OliI | CACNNNNGTG | 2 cut(s) | 1712, 2445 |
| PacI | TTAATTAA | 1 cut(s) | 1182 |
| PaeI | GCATGC | 1 cut(s) | 1458 |
| PaeR7I | CTCGAG | 1 cut(s) | 1269 |
| PagI | TCATGA | 1 cut(s) | 1224 |
| PceI | AGGCCT | 1 cut(s) | 2309 |
| PciI | ACATGT | 2 cut(s) | 372, 687 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 288, 1387 |
| PctI | GAATGC | 2 cut(s) | 453, 1774 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2274 |
| PfeI | GAWTC | 4 cut(s) | 615, 891, 1837, 2065 |
| PinAI | ACCGGT | 1 cut(s) | 406 |
| PkrI | GCNGC | 5 cut(s) | 104, 673, 1174, 1921, 2476 |
| PleI | GAGTC | 1 cut(s) | 1226 |
| PpsI | GAGTC | 1 cut(s) | 1226 |
| Ppu21I | YACGTR | 4 cut(s) | 154, 233, 416, 1365 |
| PpuMI | RGGWCCY | 2 cut(s) | 269, 560 |
| PscI | ACATGT | 2 cut(s) | 372, 687 |
| PsiI | TTATAA | 1 cut(s) | 299 |
| Psp124BI | GAGCTC | 1 cut(s) | 972 |
| Psp1406I | AACGTT | 2 cut(s) | 1059, 1381 |
| Psp5II | RGGWCCY | 2 cut(s) | 269, 560 |
| Psp6I | CCWGG | 4 cut(s) | 556, 1119, 2457, 2480 |
| PspEI | GGTNACC | 1 cut(s) | 1987 |
| PspFI | CCCAGC | 2 cut(s) | 265, 796 |
| PspGI | CCWGG | 4 cut(s) | 556, 1119, 2457, 2480 |
| PspN4I | GGNNCC | 6 cut(s) | 270, 482, 506, 1348, 1423, 1448 |
| PspPI | GGNCC | 6 cut(s) | 269, 481, 560, 1346, 2009, 2405 |
| PspPPI | RGGWCCY | 2 cut(s) | 269, 560 |
| PstI | CTGCAG | 1 cut(s) | 673 |
| PsuI | RGATCY | 5 cut(s) | 625, 1273, 1446, 1952, 2384 |
| PvuII | CAGCTG | 2 cut(s) | 169, 674 |
| RsaI | GTAC | 7 cut(s) | 156, 468, 498, 813, 1367, 1698, 2238 |
| RsaNI | GTAC | 7 cut(s) | 155, 467, 497, 812, 1366, 1697, 2237 |
| RseI | CAYNNNNRTG | 4 cut(s) | 492, 1019, 1712, 2445 |
| SacI | GAGCTC | 1 cut(s) | 972 |
| SacII | CCGCGG | 1 cut(s) | 2475 |
| SaqAI | TTAA | 9 cut(s) | 189, 729, 1049, 1178, 1182, 1191, 1208, 2214, 2288 |
| SatI | GCNGC | 5 cut(s) | 103, 672, 1173, 1920, 2475 |
| Sau96I | GGNCC | 6 cut(s) | 269, 481, 560, 1346, 2009, 2405 |
| SchI | GAGTC | 1 cut(s) | 1227 |
| ScrFI | CCNGG | 5 cut(s) | 421, 558, 1121, 2459, 2482 |
| SduI | GDGCHC | 3 cut(s) | 916, 972, 1889 |
| SexAI | ACCWGGT | 1 cut(s) | 2480 |
| SfaNI | GCATC | 5 cut(s) | 447, 892, 1011, 1863, 2432 |
| SfcI | CTRYAG | 4 cut(s) | 50, 345, 669, 921 |
| Sfr274I | CTCGAG | 1 cut(s) | 1269 |
| Sfr303I | CCGCGG | 1 cut(s) | 2475 |
| SgrBI | CCGCGG | 1 cut(s) | 2475 |
| SinI | GGWCC | 3 cut(s) | 269, 560, 1346 |
| SlaI | CTCGAG | 1 cut(s) | 1269 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 492, 1019, 1712, 2445 |
| SmlI | CTYRAG | 3 cut(s) | 1269, 1849, 2213 |
| SmoI | CTYRAG | 3 cut(s) | 1269, 1849, 2213 |
| SphI | GCATGC | 1 cut(s) | 1458 |
| SseBI | AGGCCT | 1 cut(s) | 2309 |
| SsiI | CCGC | 9 cut(s) | 103, 502, 1631, 1950, 2051, 2232, 2331, 2472, 2474 |
| SspI | AATATT | 1 cut(s) | 1932 |
| SspMI | CTAG | 7 cut(s) | 608, 965, 1355, 1611, 1754, 2097, 2126 |
| SstI | GAGCTC | 1 cut(s) | 972 |
| StuI | AGGCCT | 1 cut(s) | 2309 |
| StyD4I | CCNGG | 5 cut(s) | 419, 556, 1119, 2457, 2480 |
| StyI | CCWWGG | 2 cut(s) | 957, 2002 |
| TaaI | ACNGT | 7 cut(s) | 79, 1468, 1711, 1884, 1891, 2077, 2398 |
| TaqI | TCGA | 9 cut(s) | 291, 613, 1113, 1270, 1872, 2020, 2105, 2352, 2426 |
| TatI | WGTACW | 2 cut(s) | 496, 1696 |
| TauI | GCSGC | 2 cut(s) | 105, 2477 |
| TfiI | GAWTC | 4 cut(s) | 615, 891, 1837, 2065 |
| Tru1I | TTAA | 9 cut(s) | 189, 729, 1049, 1178, 1182, 1191, 1208, 2214, 2288 |
| Tru9I | TTAA | 9 cut(s) | 189, 729, 1049, 1178, 1182, 1191, 1208, 2214, 2288 |
| TscAI | CASTG | 2 cut(s) | 15, 1471 |
| TseFI | GTSAC | 3 cut(s) | 73, 2447, 2464 |
| TseI | GCWGC | 3 cut(s) | 671, 1172, 1919 |
| Tsp45I | GTSAC | 3 cut(s) | 73, 2447, 2464 |
| TspDTI | ATGAA | 5 cut(s) | 757, 861, 883, 1241, 2237 |
| TspRI | CASTG | 2 cut(s) | 15, 1471 |
| Vha464I | CTTAAG | 1 cut(s) | 2213 |
| VneI | GTGCAC | 2 cut(s) | 912, 1885 |
| VpaK11BI | GGWCC | 3 cut(s) | 269, 560, 1346 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1757 |
| XapI | RAATTY | 4 cut(s) | 142, 2163, 2274, 2377 |
| XceI | RCATGY | 6 cut(s) | 376, 691, 909, 1458, 1926, 2319 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 804, 1240 |
| XhoI | CTCGAG | 1 cut(s) | 1269 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2274 |
| XspI | CTAG | 7 cut(s) | 608, 965, 1355, 1611, 1754, 2097, 2126 |
| ZraI | GACGTC | 1 cut(s) | 759 |
| Zsp2I | ATGCAT | 4 cut(s) | 907, 1737, 2041, 2321 |