RchiOBHm_Chr1g0318411

Cation H( ) antiporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001291
Physical Location & Seq
Reverse (-)
5903548 .. 5905942
2395 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54870

Sequence Viewer

Length: 1845 bp
ATGGCCAAAACGACATTCAATATCATGTATGGAAACAAAACCTCTTTCAATGTGTGTTATAACAAAACAGAGACCCGAAACACCGGGCTATGGAGTGCAGAAAACCCCTTTGTATCATCTCTCCCAATGCTCATCATCCAACTGCTCGCTGTCTTGTTGCTCGGTCACATTCTTGCCTACATCCTCAAACCCTTGCGCCAACCACGCATTGTTTCTAATATTCTTGCTGGCGTTCTATTAGGTCCATCTTTCTTTGCTATCACGAGAATCGTGGGAGTTTCCATACTTCCTTTCGATAGCATAATGACCTTGGAGACTCTGGCAAACTTGGGGCTCGTGTTCCACATTTTCCTCATTGGGTTAGAGTTTGAATTCAGACCAGTAGTACGTGCAGGGACAAAGGCTCTCAGCATTGCCCTCGCCGGCGTGGTCTTTGCCATCCCCGCCGGGTGGGCATTGCATACCTATGTACTCTTCCGCGACTTTGAAACCGTGAAAGCCAAAAGCAATATGAAAAATGTAGCGTACGGCCCTATCTTCTGGGGCATTGTCCTCTCCAGCACCAACTTCGCTGATATCACCCAAATTCTTGCCGACTTCAAGCTTCTCCACTCGGAGGTGGGACGACTAGCCTTATCTGGTGCCATTATCTCCGATGTGGCGTCATGGTTTCTTTTTCTTGTGGTAATGGCCATACTCGGTTATGGTAAATTGTACACGGTGTTGTTAACGTTAGGCTTCATTGCATACAGTATTTTTTTACTTCGGCCAGCTCTCGCCTGGGTAATGCGCCACACCACCAAGGAAGACGGCTATAGTGATGTCCAAATATGCTTCATTCTGTTTGGGATTGTATTAAGTGGATTAATAACCGATGCCTGCGGTGGACACTCCATCGTCGGACCTTTCATGTTGGGAGCAATTATGCCCAGGGGGGTACACTTCAAACAAATGTTTGCAGATCGTGTTGGAAAATTTGTGGAAAGCCTGATGATGCCCCTCTTTTACTTGGTCATTGGGGCGAGATTCCATTCTTTTTGGCTACTCGGTGATCTAAATAACAATCTGCAAGCTGAATCTACCGTGCCTCAGCTTGTTGGGGTGATCATCCTGGCTTTCACAGCTAAGATTGTCGGCACTTTCATCGCTGCTGTACTCAACAAAATGACACCTCGCGATAGTTTAGTTCTGGGAATCCTTATGAACACTAAAGGCTTATTGGCACTCCTTATACTCACCTCTGCTCGTGACCTAAAGGCTTTGGACACCCAAACATATGGAGTAATGTTGGTTGCAATTTGGGCAATGACGGTTCCCGTTGGACCCTTCCTAGCCCTCATTTGCAAGTCCACCAAGAGTTCTACACAATATAAACAGAGAAGCATACAAAGTGTAGGAGTTGAAACAGAGCTTCGAATCCTTGCATGCACCCATACTGCGAGCAACGCATCAGGCATCATAAGCCTCATTGACGCTTCCAATCCATCCAGTAAATCCCCAATTCATGTCTTTGCTGTCAAACTGGTGGAACTTACCGACCATAATGCTGCTATGCTCATCGTGCATGATTCTTGCAACAAAACTGGAGCAGATGGCAACGACGACTTGAGCTCCAATGCATTTCAGAACTATGCAAGGCAAAGAGAAAATGTCTCCGTTCAATCACTCACCGCAGTGTCTGCCTACGCCACTATGCACGAGGATATATGCAACATGGCTGACGAGAAGCACGTCAACTTCATAATCCTCCCGTTCCGTATGCCAACTACTATTGATGGAGTCCCAGATGATCGTTATGATCCTCTTCTCACGGAAATTAGTAAGAAGATGATCGAGAGGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Na_H_Exchanger

Protein Analysis

614

Amino Acids

67.34

Weight (kDa)

8.67

Isoelectric Point (pI)

36.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 55 - 442 2.9e-50 Sodium/hydrogen exchanger, transmembrane
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 60
AccB1I GGYRCC 1 cut(s) 641
AccII CGCG 2 cut(s) 480, 1176
AciI CCGC 4 cut(s) 444, 478, 882, 1671
AclI AACGTT 1 cut(s) 731
AclWI GGATC 1 cut(s) 1793
AcoI YGGCCR 3 cut(s) 3, 690, 767
AcsI RAATTY 3 cut(s) 371, 585, 974
AcyI GRCGYC 1 cut(s) 662
AfaI GTAC 6 cut(s) 387, 471, 527, 716, 939, 1155
AfiI CCNNNNNNNGG 3 cut(s) 90, 450, 616
AgsI TTSAA 8 cut(s) 19, 49, 371, 488, 601, 946, 1403, 1661
AjiI CACGTC 1 cut(s) 1732
AjnI CCWGG 3 cut(s) 779, 929, 1110
AjuI GAANNNNNNNTTGG 1 cut(s) 31
AleI CACNNNNGTG 1 cut(s) 1673
AluBI AGCT 7 cut(s) 604, 773, 1073, 1093, 1124, 1411, 1611
AluI AGCT 7 cut(s) 604, 773, 1073, 1093, 1124, 1411, 1611
Alw21I GWGCWC 1 cut(s) 1613
Alw26I GTCTC 3 cut(s) 65, 308, 1657
AlwI GGATC 1 cut(s) 1793
AlwNI CAGNNNCTG 1 cut(s) 1679
AoxI GGCC 4 cut(s) 3, 529, 690, 767
ApeKI GCWGC 2 cut(s) 1148, 1547
ApoI RAATTY 3 cut(s) 371, 585, 974
AseI ATTAAT 1 cut(s) 866
AspLEI GCGC 2 cut(s) 198, 792
AspS9I GGNCC 4 cut(s) 242, 530, 902, 1322
AsuC2I CCSGG 2 cut(s) 85, 448
AsuHPI GGTGA 5 cut(s) 571, 1061, 1114, 1228, 1660
AsuII TTCGAA 1 cut(s) 1414
AvaII GGWCC 3 cut(s) 242, 902, 1322
BalI TGGCCA 2 cut(s) 5, 692
BanI GGYRCC 1 cut(s) 641
BanII GRGCYC 2 cut(s) 336, 1613
BauI CACGAG 4 cut(s) 262, 335, 1245, 1697
BbsI GAAGAC 1 cut(s) 813
Bbv12I GWGCWC 1 cut(s) 1613
BbvCI CCTCAGC 1 cut(s) 1089
BbvI GCAGC 2 cut(s) 1135, 1534
BccI CCATC 6 cut(s) 253, 446, 902, 1492, 1586, 1769
BceAI ACGGC 2 cut(s) 544, 826
BcgI CGANNNNNNTGC 8 cut(s) 400, 434, 550, 584, 1126, 1160, 1526, 1560
BciT130I CCWGG 3 cut(s) 781, 931, 1112
BclI TGATCA 1 cut(s) 1104
BcnI CCSGG 2 cut(s) 85, 448
BcoDI GTCTC 3 cut(s) 65, 308, 1657
BfaI CTAG 2 cut(s) 629, 1331
BfmI CTRYAG 1 cut(s) 814
BglI GCCNNNNNGGC 1 cut(s) 452
BisI GCNGC 2 cut(s) 1149, 1548
BlsI GCNGC 2 cut(s) 1150, 1549
Bme1390I CCNGG 5 cut(s) 85, 448, 781, 931, 1112
Bme18I GGWCC 3 cut(s) 242, 902, 1322
BmgBI CACGTC 1 cut(s) 1732
BmgT120I GGNCC 4 cut(s) 242, 530, 902, 1322
BmiI GGNNCC 3 cut(s) 643, 1314, 1324
BmrFI CCNGG 5 cut(s) 85, 448, 781, 931, 1112
BmsI GCATC 4 cut(s) 865, 984, 1457, 1464
BpiI GAAGAC 1 cut(s) 813
BpmI CTGGAG 2 cut(s) 541, 1605
Bpu10I CCTNAGC 1 cut(s) 1089
Bpu14I TTCGAA 1 cut(s) 1414
BpuEI CTTGAG 1 cut(s) 1627
BpuMI CCSGG 2 cut(s) 85, 448
BsaAI YACGTR 1 cut(s) 389
BsaHI GRCGYC 1 cut(s) 662
BsaI GGTCTC 1 cut(s) 65
BsaJI CCNNGG 5 cut(s) 309, 780, 801, 929, 930
BsaXI ACNNNNNCTCC 2 cut(s) 1595, 1625
Bsc4I CCNNNNNNNGG 3 cut(s) 90, 450, 616
Bse118I RCCGGY 1 cut(s) 422
Bse1I ACTGG 4 cut(s) 380, 1488, 1527, 1588
Bse3DI GCAATG 4 cut(s) 411, 455, 741, 1311
BseBI CCWGG 3 cut(s) 781, 931, 1112
BseDI CCNNGG 5 cut(s) 309, 780, 801, 929, 930
BseGI GGATG 5 cut(s) 135, 180, 438, 1107, 1484
BseLI CCNNNNNNNGG 3 cut(s) 90, 450, 616
BseMI GCAATG 4 cut(s) 411, 455, 741, 1311
BseMII CTCAG 2 cut(s) 421, 1103
BseNI ACTGG 4 cut(s) 380, 1488, 1527, 1588
BseXI GCAGC 2 cut(s) 1135, 1534
BsgI GTGCAG 2 cut(s) 117, 411
Bsh1236I CGCG 2 cut(s) 480, 1176
BshFI GGCC 4 cut(s) 5, 531, 692, 769
BshNI GGYRCC 1 cut(s) 641
BsiHKAI GWGCWC 1 cut(s) 1613
BsiSI CCGG 3 cut(s) 84, 423, 447
BsiWI CGTACG 1 cut(s) 525
BslFI GGGAC 3 cut(s) 409, 636, 1766
BslI CCNNNNNNNGG 3 cut(s) 90, 450, 616
BsmAI GTCTC 3 cut(s) 65, 308, 1657
BsmFI GGGAC 3 cut(s) 409, 636, 1766
BsnI GGCC 4 cut(s) 5, 531, 692, 769
Bso31I GGTCTC 1 cut(s) 65
Bsp119I TTCGAA 1 cut(s) 1414
Bsp1286I GDGCHC 2 cut(s) 336, 1613
Bsp1407I TGTACA 1 cut(s) 714
Bsp143I GATC 6 cut(s) 961, 1051, 1104, 1789, 1798, 1830
Bsp68I TCGCGA 1 cut(s) 1176
BspACI CCGC 4 cut(s) 444, 478, 882, 1671
BspANI GGCC 4 cut(s) 5, 531, 692, 769
BspCNI CTCAG 2 cut(s) 420, 1102
BspFNI CGCG 2 cut(s) 480, 1176
BspLI GGNNCC 3 cut(s) 643, 1314, 1324
BspPI GGATC 1 cut(s) 1793
BspT104I TTCGAA 1 cut(s) 1414
BspT107I GGYRCC 1 cut(s) 641
BspTNI GGTCTC 1 cut(s) 65
BsrDI GCAATG 4 cut(s) 411, 455, 741, 1311
BsrFI RCCGGY 1 cut(s) 422
BsrGI TGTACA 1 cut(s) 714
BsrI ACTGG 4 cut(s) 380, 1488, 1527, 1588
BssAI RCCGGY 1 cut(s) 422
BssECI CCNNGG 5 cut(s) 309, 780, 801, 929, 930
BssMI GATC 6 cut(s) 961, 1051, 1104, 1789, 1798, 1830
BssNI GRCGYC 1 cut(s) 662
BssSI CACGAG 4 cut(s) 262, 335, 1245, 1697
BssT1I CCWWGG 2 cut(s) 309, 801
Bst2BI CACGAG 4 cut(s) 262, 335, 1245, 1697
Bst2UI CCWGG 3 cut(s) 781, 931, 1112
Bst4CI ACNGT 5 cut(s) 493, 721, 752, 1084, 1312
Bst6I CTCTTC 2 cut(s) 479, 1809
BstACI GRCGYC 1 cut(s) 662
BstAPI GCANNNNNTGC 1 cut(s) 1679
BstAUI TGTACA 1 cut(s) 714
BstBAI YACGTR 1 cut(s) 389
BstBI TTCGAA 1 cut(s) 1414
BstC8I GCNNGC 8 cut(s) 147, 229, 424, 771, 880, 1071, 1426, 1441
BstDEI CTNAG 3 cut(s) 407, 1089, 1125
BstF5I GGATG 5 cut(s) 135, 180, 438, 1107, 1484
BstFNI CGCG 2 cut(s) 480, 1176
BstHHI GCGC 2 cut(s) 198, 792
BstKTI GATC 6 cut(s) 964, 1054, 1107, 1792, 1801, 1833
BstMAI GTCTC 3 cut(s) 65, 308, 1657
BstMBI GATC 6 cut(s) 961, 1051, 1104, 1789, 1798, 1830
BstMWI GCNNNNNNNGC 9 cut(s) 204, 443, 452, 1121, 1301, 1445, 1461, 1561, 1679
BstNI CCWGG 3 cut(s) 781, 931, 1112
BstNSI RCATGY 1 cut(s) 1428
BstSCI CCNGG 5 cut(s) 83, 446, 779, 929, 1110
BstSFI CTRYAG 1 cut(s) 814
BstUI CGCG 2 cut(s) 480, 1176
BstV1I GCAGC 2 cut(s) 1135, 1534
BstV2I GAAGAC 1 cut(s) 813
BstXI CCANNNNNNTGG 1 cut(s) 1277
BsuRI GGCC 4 cut(s) 5, 531, 692, 769
BtgZI GCGATG 1 cut(s) 1129
BtrI CACGTC 1 cut(s) 1732
BtsCI GGATG 5 cut(s) 135, 180, 438, 1107, 1484
BtsI GCAGTG 1 cut(s) 1680
BtsIMutI CAGTG 1 cut(s) 1680
BtuMI TCGCGA 1 cut(s) 1176
Cac8I GCNNGC 8 cut(s) 147, 229, 424, 771, 880, 1071, 1426, 1441
CaiI CAGNNNCTG 1 cut(s) 1679
CfoI GCGC 2 cut(s) 198, 792
Cfr10I RCCGGY 1 cut(s) 422
Cfr13I GGNCC 4 cut(s) 242, 530, 902, 1322
CseI GACGC 2 cut(s) 651, 1481
Csp6I GTAC 6 cut(s) 386, 470, 526, 715, 938, 1154
CviAII CATG 7 cut(s) 25, 666, 910, 1425, 1505, 1565, 1714
CviQI GTAC 6 cut(s) 386, 470, 526, 715, 938, 1154
DdeI CTNAG 3 cut(s) 407, 1089, 1125
DpnI GATC 6 cut(s) 963, 1053, 1106, 1791, 1800, 1832
DpnII GATC 6 cut(s) 961, 1051, 1104, 1789, 1798, 1830
EaeI YGGCCR 3 cut(s) 3, 690, 767
Eam1104I CTCTTC 2 cut(s) 479, 1809
EarI CTCTTC 2 cut(s) 479, 1809
Ecl136II GAGCTC 1 cut(s) 1611
Eco130I CCWWGG 2 cut(s) 309, 801
Eco24I GRGCYC 2 cut(s) 336, 1613
Eco31I GGTCTC 1 cut(s) 65
Eco32I GATATC 1 cut(s) 577
Eco47I GGWCC 3 cut(s) 242, 902, 1322
Eco53kI GAGCTC 1 cut(s) 1611
EcoICRI GAGCTC 1 cut(s) 1611
EcoRI GAATTC 1 cut(s) 371
EcoRII CCWGG 3 cut(s) 779, 929, 1110
EcoRV GATATC 1 cut(s) 577
EcoT14I CCWWGG 2 cut(s) 309, 801
EcoT22I ATGCAT 1 cut(s) 1621
EcoT38I GRGCYC 2 cut(s) 336, 1613
ErhI CCWWGG 2 cut(s) 309, 801
FaeI CATG 7 cut(s) 28, 669, 913, 1428, 1508, 1568, 1717
FaqI GGGAC 3 cut(s) 409, 636, 1766
FatI CATG 7 cut(s) 24, 665, 909, 1424, 1504, 1564, 1713
FauI CCCGC 1 cut(s) 451
FauNDI CATATG 1 cut(s) 1276
FbaI TGATCA 1 cut(s) 1104
Fnu4HI GCNGC 2 cut(s) 1149, 1548
FokI GGATG 5 cut(s) 122, 167, 425, 1094, 1471
FriOI GRGCYC 2 cut(s) 336, 1613
Fsp4HI GCNGC 2 cut(s) 1149, 1548
FspBI CTAG 2 cut(s) 629, 1331
GlaI GCGC 2 cut(s) 197, 791
GluI GCNGC 2 cut(s) 1149, 1548
GsuI CTGGAG 2 cut(s) 541, 1605
HaeIII GGCC 4 cut(s) 5, 531, 692, 769
HapII CCGG 3 cut(s) 84, 423, 447
HgaI GACGC 2 cut(s) 651, 1481
HhaI GCGC 2 cut(s) 198, 792
Hin1I GRCGYC 1 cut(s) 662
Hin1II CATG 7 cut(s) 28, 669, 913, 1428, 1508, 1568, 1717
Hin6I GCGC 2 cut(s) 196, 790
HinP1I GCGC 2 cut(s) 196, 790
HincII GTYRAC 2 cut(s) 729, 1735
HindII GTYRAC 2 cut(s) 729, 1735
HindIII AAGCTT 1 cut(s) 602
HinfI GANTC 8 cut(s) 267, 316, 1026, 1076, 1194, 1416, 1568, 1779
HpaI GTTAAC 1 cut(s) 729
HpaII CCGG 3 cut(s) 84, 423, 447
HphI GGTGA 5 cut(s) 571, 1061, 1114, 1228, 1660
Hpy166II GTNNAC 6 cut(s) 717, 729, 887, 940, 1350, 1735
Hpy188I TCNGA 5 cut(s) 377, 616, 655, 902, 1626
Hpy188III TCNNGA 4 cut(s) 262, 1175, 1247, 1834
Hpy8I GTNNAC 6 cut(s) 717, 729, 887, 940, 1350, 1735
Hpy99I CGWCG 2 cut(s) 902, 1604
HpyAV CCTTC 1 cut(s) 1336
HpyCH4III ACNGT 5 cut(s) 493, 721, 752, 1084, 1312
HpyCH4IV ACGT 3 cut(s) 388, 731, 1731
HpyF10VI GCNNNNNNNGC 9 cut(s) 204, 443, 452, 1121, 1301, 1445, 1461, 1561, 1679
HpyF3I CTNAG 3 cut(s) 407, 1089, 1125
HpySE526I ACGT 3 cut(s) 388, 731, 1731
Hsp92I GRCGYC 1 cut(s) 662
Hsp92II CATG 7 cut(s) 28, 669, 913, 1428, 1508, 1568, 1717
HspAI GCGC 2 cut(s) 196, 790
KroI GCCGGC 1 cut(s) 422
KroNI GCCGGC 1 cut(s) 424
Ksp22I TGATCA 1 cut(s) 1104
KspAI GTTAAC 1 cut(s) 729
Kzo9I GATC 6 cut(s) 961, 1051, 1104, 1789, 1798, 1830
LmnI GCTCC 3 cut(s) 917, 1586, 1616
Lsp1109I GCAGC 2 cut(s) 1135, 1534
LweI GCATC 4 cut(s) 865, 984, 1457, 1464
MaeI CTAG 2 cut(s) 629, 1331
MaeII ACGT 3 cut(s) 388, 731, 1731
MaeIII GTNAC 2 cut(s) 164, 1247
MalI GATC 6 cut(s) 963, 1053, 1106, 1791, 1800, 1832
MboI GATC 6 cut(s) 961, 1051, 1104, 1789, 1798, 1830
MboII GAAGA 5 cut(s) 466, 529, 818, 1796, 1837
MhlI GDGCHC 2 cut(s) 336, 1613
MlsI TGGCCA 2 cut(s) 5, 692
MluCI AATT 8 cut(s) 371, 585, 710, 921, 974, 1296, 1500, 1815
MluNI TGGCCA 2 cut(s) 5, 692
MlyI GAGTC 2 cut(s) 310, 1788
MmeI TCCRAC 4 cut(s) 163, 880, 949, 1300
Mox20I TGGCCA 2 cut(s) 5, 692
Mph1103I ATGCAT 1 cut(s) 1621
MreI CGCCGGCG 1 cut(s) 422
MroNI GCCGGC 1 cut(s) 422
MscI TGGCCA 2 cut(s) 5, 692
MseI TTAA 3 cut(s) 728, 857, 866
MslI CAYNNNNRTG 2 cut(s) 465, 1673
Msp20I TGGCCA 2 cut(s) 5, 692
MspI CCGG 3 cut(s) 84, 423, 447
MspR9I CCNGG 5 cut(s) 85, 448, 781, 931, 1112
MvaI CCWGG 3 cut(s) 781, 931, 1112
MvnI CGCG 2 cut(s) 480, 1176
MwoI GCNNNNNNNGC 9 cut(s) 204, 443, 452, 1121, 1301, 1445, 1461, 1561, 1679
NaeI GCCGGC 1 cut(s) 424
NciI CCSGG 2 cut(s) 85, 448
NdeI CATATG 1 cut(s) 1276
NdeII GATC 6 cut(s) 961, 1051, 1104, 1789, 1798, 1830
NgoMIV GCCGGC 1 cut(s) 422
NlaIII CATG 7 cut(s) 28, 669, 913, 1428, 1508, 1568, 1717
NlaIV GGNNCC 3 cut(s) 643, 1314, 1324
NmuCI GTSAC 2 cut(s) 164, 1247
NruI TCGCGA 1 cut(s) 1176
NsiI ATGCAT 1 cut(s) 1621
NspI RCATGY 1 cut(s) 1428
NspV TTCGAA 1 cut(s) 1414
OliI CACNNNNGTG 1 cut(s) 1673
PaeI GCATGC 1 cut(s) 1428
PasI CCCWGGG 1 cut(s) 930
PcsI WCGNNNNNNNCGW 1 cut(s) 1728
PdiI GCCGGC 1 cut(s) 424
PfeI GAWTC 6 cut(s) 267, 1026, 1076, 1194, 1416, 1568
Pfl23II CGTACG 1 cut(s) 525
PkrI GCNGC 2 cut(s) 1150, 1549
PleI GAGTC 2 cut(s) 310, 1787
PpsI GAGTC 2 cut(s) 310, 1787
Ppu21I YACGTR 1 cut(s) 389
PshBI ATTAAT 1 cut(s) 866
PsiI TTATAA 1 cut(s) 60
Psp124BI GAGCTC 1 cut(s) 1613
Psp1406I AACGTT 1 cut(s) 731
Psp6I CCWGG 3 cut(s) 779, 929, 1110
PspGI CCWGG 3 cut(s) 779, 929, 1110
PspLI CGTACG 1 cut(s) 525
PspN4I GGNNCC 3 cut(s) 643, 1314, 1324
PspPI GGNCC 4 cut(s) 242, 530, 902, 1322
PstNI CAGNNNCTG 1 cut(s) 1679
RruI TCGCGA 1 cut(s) 1176
RsaI GTAC 6 cut(s) 387, 471, 527, 716, 939, 1155
RsaNI GTAC 6 cut(s) 386, 470, 526, 715, 938, 1154
RseI CAYNNNNRTG 2 cut(s) 465, 1673
SacI GAGCTC 1 cut(s) 1613
SaqAI TTAA 3 cut(s) 728, 857, 866
SatI GCNGC 2 cut(s) 1149, 1548
Sau3AI GATC 6 cut(s) 961, 1051, 1104, 1789, 1798, 1830
Sau96I GGNCC 4 cut(s) 242, 530, 902, 1322
SchI GAGTC 2 cut(s) 310, 1788
ScrFI CCNGG 5 cut(s) 85, 448, 781, 931, 1112
SduI GDGCHC 2 cut(s) 336, 1613
SfaNI GCATC 4 cut(s) 865, 984, 1457, 1464
SfcI CTRYAG 1 cut(s) 814
SfuI TTCGAA 1 cut(s) 1414
SgrAI CRCCGGYG 1 cut(s) 422
SinI GGWCC 3 cut(s) 242, 902, 1322
SmiMI CAYNNNNRTG 2 cut(s) 465, 1673
SmlI CTYRAG 1 cut(s) 1606
SmoI CTYRAG 1 cut(s) 1606
SphI GCATGC 1 cut(s) 1428
Sse9I AATT 8 cut(s) 371, 585, 710, 921, 974, 1296, 1500, 1815
SsiI CCGC 4 cut(s) 444, 478, 882, 1671
SspI AATATT 1 cut(s) 220
SspMI CTAG 2 cut(s) 629, 1331
SstI GAGCTC 1 cut(s) 1613
StyD4I CCNGG 5 cut(s) 83, 446, 779, 929, 1110
StyI CCWWGG 2 cut(s) 309, 801
TaaI ACNGT 5 cut(s) 493, 721, 752, 1084, 1312
TaiI ACGT 3 cut(s) 391, 734, 1734
TaqI TCGA 3 cut(s) 294, 1414, 1833
TaqII GACCGA 1 cut(s) 152
TasI AATT 8 cut(s) 371, 585, 710, 921, 974, 1296, 1500, 1815
TatI WGTACW 3 cut(s) 469, 714, 1153
TfiI GAWTC 6 cut(s) 267, 1026, 1076, 1194, 1416, 1568
Tru1I TTAA 3 cut(s) 728, 857, 866
Tru9I TTAA 3 cut(s) 728, 857, 866
TscAI CASTG 1 cut(s) 1680
TseFI GTSAC 2 cut(s) 164, 1247
TseI GCWGC 2 cut(s) 1148, 1547
Tsp45I GTSAC 2 cut(s) 164, 1247
TspDTI ATGAA 8 cut(s) 527, 730, 826, 898, 1132, 1217, 1493, 1729
TspGWI ACGGA 3 cut(s) 1645, 1745, 1826
TspRI CASTG 1 cut(s) 1680
VpaK11BI GGWCC 3 cut(s) 242, 902, 1322
VspI ATTAAT 1 cut(s) 866
XapI RAATTY 3 cut(s) 371, 585, 974
XceI RCATGY 1 cut(s) 1428
XcmI CCANNNNNNNNNTGG 1 cut(s) 777
XspI CTAG 2 cut(s) 629, 1331
Zsp2I ATGCAT 1 cut(s) 1621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.