Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001065

Physical Location & Seq

Genomic Coordinates Forward (+)

8642807 .. 8649890

Gene Structure 7084 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g08540.t12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3441 bp

ATGCTTGAATCTGAAGAGAGAATAAAATTGCTTGAGGCCCAGAAGGACCTCCATCCTCTTTTGGGGCCGGACACAAGAAAACTGTGTGGAATCCTACAACTCTCAGATGCTGCCATGAGTTTCGTTGAAATTCTTCTTGAATATGTTATCAATAGCCACCTTATTAACAGAGAATCAACAATGTTGCAGGCGTTTCAGATATCTCTGTGTTGGACCGCAGCTTCATTGCTGAAGCAGAAAGTCAATCACAAAGAATCCCTTGCCTGTGCGAAGAAGCATCTTAACTTCAATTGCACAAAGGACGAGGTGGACTTTGTGTATGCCATGCTGCAGTGTCTGAAAAGTAGGTTGTTATACTGTACATCTAGTAGATATCCTTTAGAGGACCGCTCAAATTCAAAGGTTTCTCATTCTTCCCAGAAATTCACATCAGAGATTGGAGGCTTGTCACTAGATCAAGAATATACAGCACAAAAGGATGTGTCAAAGAGTATCAAACAAATTCAGAAAAAGTTTAAAAAGAAGTTGAAAAAATTTGATGATAAGCAATGGAAAGAGAGAAGTGAAATTTTGAGAAGGTACAAGGAAGAGGCGGAAAACCTGGAATTCAAGCACAAAATGGAGTCCATTGTTATTCAAACTTGTATGTGGGGAAATATATTGCTGAGGACAAGTAAGCATAAGATGTGGGAAGTTGAACAACGAAAAGAAGTGGAAGACCATAAACACCAAATTGAAATGCGTCTTGAACTTCTCAAGAAATTGCAGCTGGAAGCAACGAGAAAGTTAAAGGAGAAGGAGAACATTTGGGTAGAAGAGTTGAAAAAATGGGCTCGTGATGAATTATTATATAGGCCATCTTTAGAGGCACCTGAATCTGTACATATCACGAATGGGGTGGTGATGGTACTGCCTCAAACAGCTGAACATGTTACTGATAAAGCTGTAGCATGCAGTGTCCACATTACAGCAATGGCTCCAGTTTGCCCCGTGAGTTCCGATTCTGCATTAGATCCAATGACTTCTGTGGCTGGTTTGTTTACTGATGTTATGAGCATGAAAAATTCTGGCAAGTTTTCTCATGGTCAAGAGAATTTTGTATCTGTAAGCTCTGGTGCCAAAGGCCTAATTAATATTGGAGGCACTTCTGACAGTGCGGAGGTTCTGCTGGATGTTACTGAAAATGTCTGCTCTATGCCTGCTCTAACTACAGTTATAACCCCCAGTCTTCATTCATTTGACAAATGCCTTCACAATACAAACCCATTACCCATTGCCGGTGCAGAGGTCAGTTTAGAAGTGGCCGAAACTGTCAATTTAGTCGATGGTCCACAGAGACCCCTTCTTTTGAATCCAACTTATGTAGAAGATAATCCTAATCCAGAGGGGTTGCATGAGACCGTCAGTACAAGTCGTGATTTGTGTAATGTGGTGTCTGAGATAGTACCTTCAGGTGAGGAACAAGTTCATGTATTTAGTCTAGCGACTATGCAAGATAAAGAGGCTGAAACAGGGGGGCATGTCATGTTGGATAATGGCCCCGGGAATCTTGTTGCAATGCATTTACCACAGATGTTTAAAAGCGCCACAGGAAAGGAGAACAGTGTAGTGCACGAGACTATCAGCTCAGGTCATGATTTTCATAATGGTGTACCTGTGATCCCACCTTCATCTGAAGAACAAAATCCAGTAATGAGGGTAGCGACTGTGCAAGATAAAGTGGCTGAAGCTGGAGTGCTTGATAAAGAGTCCAATATCTATGCAAGTTTGGGTGAGGACCAAGGGAATCTTGTGTCCGTGCATTCATCTTCATTTGAAAATCAAATCCCGGTAAGCGCCTCAGGGAAACAGAACGGTGAAGCACAGTGTTTGGCTTCTACTAGTACAACTCAGGTCAGTCAGCAGAACTTAGTTGATTCTGCAGTCAATGGAATCTCTTATCAGGAAATGCCCCTGGAAAGTTCACCCACGGCAGACCAAGACCAAGGTACTGATATGGCCACATCAAGTGCAGCACAAGCTTGCGTAAATCAGAATACTGGTCAACCCATGGAAAATCCTTTCCACGACGAAATTGAAGTTCAGCCAAGTGGTGAAGACTCTGACTTCAATCAAGTTCTCCAAGTGGCAATGCAATTTTATTCCCGTCTCCCTGCTCTTTCTGAACAAACTGTTTCACAACCTCTGACAAGTTTTTCCTTGAATCAGCGAGCTCATGCACCTACTAATGGTTTTGATATACCTTTCTCACACACAAGACCTACATTTGTTACATCTCATTTGCTTCTTCCTTTCAACTGTGAATTGCTTCAACATGAATTGGAAAGATTGGAAAGAGAAAGAGAAGAAAGCCTCAAGTCTCATGAAGATAAAAAGCTGCAATTGAAATCTGATATGGAGAAGGGGATAGAGGAATTGAAAGCTGAAATTTGTCAAGAGTATGAGACCAAGCTCCAACAGATAGAAGCGGAATTTATCCTTAAAAAGGAAGATTTGCTTGCAATTCACAAAAAAGTATTAATCCATATGTTGCTGGCTTGTGCTTGGGATCTGGCTTTCAAGTCCAATGTCATGGATATTACAGGTTCAAGTTCATCTGGAGTGCATCATGGTGGGAACTATACTGTTGACCGCCAACTGGTTTGGTCATATATGCAGCAAAATGCACAAATGCCTTCTCTAGTTTCCGGTTCATCTTCAGCCAACCCTCCTGCAGCTTGCCGACAGTCAACTCCACTTGCATTGGCAACCATTCCACACTATACAGCTCCACTGAGACAAAGTGTTGAGTTTTTGCCTACTCCTCCTGTCTTTTCTTTGACCAATCCAGCAAGTCATCCCCACATCAGTTCCTTCTCTTTGACAGGAGGACCTCAAGGTAGAGTTGAGATTCGAGCCCCTCTCCAAGATCAACCTTGTAGACCTTCAATACCCTTTACTGGAGGTACCAGTGCTTTCTCTCATGAAGAAGGGTCATCTAATCATCAGTCACAAAGAAACTCACTTTCATCGTCTCTCCCGGAACTTTTTATCTCACAACAACCGACACCAACACAAATTTCTGATCCCTACAATATGCAACATGATCATGAAATTGCTGGGGAACCTTCATTATCCGTCACTGGTACCGGTCCTGTCTATCAACAATGTGGGGTTATATTAAATCAGCAGCAACACACTACTTCTCCTCCGTCTCCCCCATCACTTCCTCCTCCTACTCAACGACCTTTGCTCCTCACACAGCAATTTGTTCCTAGTAATATGGTCCGTCACCGTGAAACTACGGAAGGATTGCCAGCTCTTCGTAGTGCATCTGCACTGGAGTTGCTTACCGACACGGGTTATCCATCTTCACGTAGTTGGCGTTCAACACAGAATGGTTCAAGACTTGAATCATCTAGTGGATCCACAGATATAGTTTGTTTATCAGATGATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006342 GO:0006344 GO:0006355 GO:0006996 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0040029 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0046983 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N

Protein Analysis

1147

Amino Acids

126.67

Weight (kDa)

5.45

Isoelectric Point (pI)

52.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MOM1	PF25029	3 - 88	2.1e-34	MOM1-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001065)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08060 AT1G08060 AT1G08060
fragaria_vesca	FvH4_3g31740 FvH4_3g31740 FvH4_4g08540 FvH4_4g08540 FvH4_4g08540 FvH4_4g08540 FvH4_4g08540 FvH4_4g08540 FvH4_4g08540 FvH4_4g08540 FvH4_4g08540 FvH4_4g08540 FvH4_4g08540 FvH4_4g08540
malus_domestica	MD03G1121600.v1.1 MD11G1139900.v1.1 MD11G1140000.v1.1
prunus_persica	Prupe.6G104600_v2.0.a1 Prupe.6G104600_v2.0.a1 Prupe.6G104600_v2.0.a1 Prupe.6G104600_v2.0.a1 Prupe.6G104600_v2.0.a1 Prupe.6G104600_v2.0.a1 Prupe.6G104600_v2.0.a1 Prupe.6G104600_v2.0.a1 Prupe.6G104600_v2.0.a1 Prupe.6G104700_v2.0.a1
pyrus_communis	pycom11g11560 pycom11g11580
rosa_chinensis	RchiOBHm_Chr4g0405411 RchiOBHm_Chr5g0058411
rosa_laevigata	RLG00000008844 RLG00000035218
rosa_multiflora	Rmu_sc0000367.1_g000115 Rmu_sc0000575.1_g000013
rosa_roxburghii	Rroxscaffold_1G00022120 Rroxscaffold_1G00022140 Rroxscaffold_5G00349880
rosa_rugosa	Rorug04G0059700 Rorug04G0059800 Rorug04G0059900 Rorug04G0060000 Rorug05G0313800 Rorug05G0313800 Rorug05G0313900 Rorug05G0314000 Rorug05G0314100
rosa_samantha	Rh4AG131700 Rh4BG126600 Rh4CG139100 Rh4DG125700 Rh5AG381300 Rh5BG392800 Rh5CG416900 Rh5DG408000
rosa_wichuraiana	Rw4G010660 Rw5G035920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1217
Acc65I	GGTACC	2 cut(s)	2945, 3125
AccB1I	GGYRCC	4 cut(s)	868, 1115, 2945, 3125
AccBSI	CCGCTC	1 cut(s)	390
AccI	GTMKAC	1 cut(s)	2920
AciI	CCGC	6 cut(s)	216, 388, 593, 1157, 2468, 2632
AclWI	GGATC	6 cut(s)	1007, 1654, 2556, 3059, 3399, 3412
AcoI	YGGCCR	2 cut(s)	1302, 1998
AcuI	CTGAAG	6 cut(s)	33, 251, 1434, 1695, 1746, 2682
AfiI	CCNNNNNNNGG	6 cut(s)	62, 1277, 2228, 2485, 2638, 2939
AflIII	ACRYGT	1 cut(s)	928
AgeI	ACCGGT	1 cut(s)	3128
AhlI	ACTAGT	1 cut(s)	1880
AjnI	CCWGG	2 cut(s)	600, 1953
AjuI	GAANNNNNNNTTGG	2 cut(s)	3043, 3075
Alw21I	GWGCWC	2 cut(s)	1614, 2215
Alw26I	GTCTC	9 cut(s)	1330, 1391, 1610, 2153, 2364, 2438, 2770, 3018, 3198
Alw44I	GTGCAC	1 cut(s)	1610
AlwI	GGATC	6 cut(s)	1007, 1654, 2556, 3059, 3399, 3412
AlwNI	CAGNNNCTG	2 cut(s)	110, 337
Ama87I	CYCGRG	1 cut(s)	1541
AoxI	GGCC	7 cut(s)	36, 65, 854, 1123, 1302, 1537, 1998
ApaLI	GTGCAC	1 cut(s)	1610
ApeKI	GCWGC	9 cut(s)	110, 218, 328, 766, 2012, 2377, 2656, 2714, 3169
AseI	ATTAAT	2 cut(s)	1131, 2519
AsiGI	ACCGGT	1 cut(s)	3128
Asp700I	GAANNNNTTC	3 cut(s)	132, 1464, 2307
Asp718I	GGTACC	2 cut(s)	2945, 3125
AspLEI	GCGC	2 cut(s)	1586, 1838
AsuC2I	CCSGG	4 cut(s)	1542, 1543, 1829, 3020
AsuHPI	GGTGA	7 cut(s)	913, 1466, 1784, 1868, 1956, 2105, 3263
AvaI	CYCGRG	1 cut(s)	1541
AvaII	GGWCC	8 cut(s)	46, 213, 385, 1328, 1777, 2870, 3131, 3265
AxyI	CCTNAGG	1 cut(s)	1840
BaeGI	GKGCMC	1 cut(s)	1614
BalI	TGGCCA	1 cut(s)	2000
BamHI	GGATCC	1 cut(s)	3404
BanI	GGYRCC	4 cut(s)	868, 1115, 2945, 3125
BanII	GRGCYC	3 cut(s)	835, 2215, 2899
BauI	CACGAG	2 cut(s)	834, 1613
BbsI	GAAGAC	3 cut(s)	723, 1220, 2103
Bbv12I	GWGCWC	2 cut(s)	1614, 2215
BbvCI	CCTCAGC	1 cut(s)	665
BbvI	GCAGC	9 cut(s)	97, 230, 315, 778, 2024, 2364, 2668, 2726, 3181
BccI	CCATC	6 cut(s)	60, 865, 898, 1319, 3208, 3355
BceAI	ACGGC	1 cut(s)	1986
BciT130I	CCWGG	2 cut(s)	602, 1955
BclI	TGATCA	1 cut(s)	3085
BcnI	CCSGG	4 cut(s)	1542, 1543, 1829, 3020
BcoDI	GTCTC	9 cut(s)	1330, 1391, 1610, 2153, 2364, 2438, 2770, 3018, 3198
BcuI	ACTAGT	1 cut(s)	1880
BfaI	CTAG	7 cut(s)	366, 452, 1481, 1881, 2681, 3255, 3399
BfmI	CTRYAG	5 cut(s)	329, 945, 1209, 1920, 2712
BfoI	RGCGCY	2 cut(s)	1587, 1839
BisI	GCNGC	9 cut(s)	111, 219, 329, 767, 2013, 2378, 2657, 2715, 3170
BlsI	GCNGC	9 cut(s)	112, 220, 330, 768, 2014, 2379, 2658, 2716, 3171
Bme1390I	CCNGG	6 cut(s)	602, 1542, 1543, 1829, 1955, 3020
Bme18I	GGWCC	8 cut(s)	46, 213, 385, 1328, 1777, 2870, 3131, 3265
BmeT110I	CYCGRG	1 cut(s)	1541
BmiI	GGNNCC	9 cut(s)	66, 870, 978, 1117, 1540, 2947, 3105, 3127, 3406
BmrFI	CCNGG	6 cut(s)	602, 1542, 1543, 1829, 1955, 3020
BmrI	ACTGGG	1 cut(s)	1218
BmsI	GCATC	4 cut(s)	97, 286, 2614, 3320
BmuI	ACTGGG	1 cut(s)	1218
BpiI	GAAGAC	3 cut(s)	723, 1220, 2103
BplI	GAGNNNNNCTC	4 cut(s)	374, 406, 2886, 2918
BpmI	CTGGAG	5 cut(s)	963, 1752, 2619, 2961, 3341
Bpu10I	CCTNAGC	2 cut(s)	665, 1627
BpuEI	CTTGAG	4 cut(s)	53, 740, 2339, 2859
BpuMI	CCSGG	4 cut(s)	1542, 1543, 1829, 3020
BsaAI	YACGTR	1 cut(s)	3356
BsaI	GGTCTC	3 cut(s)	1330, 1391, 2438
BsaJI	CCNNGG	7 cut(s)	1540, 1541, 1780, 1953, 1968, 1984, 2049
BsaWI	WCCGGW	2 cut(s)	2687, 3128
BsaXI	ACNNNNNCTCC	6 cut(s)	3169, 3172, 3199, 3202, 3216, 3246
Bsc4I	CCNNNNNNNGG	6 cut(s)	62, 1277, 2228, 2485, 2638, 2939
Bse118I	RCCGGY	2 cut(s)	1277, 3128
Bse1I	ACTGG	9 cut(s)	980, 1224, 1688, 2044, 2643, 2944, 2949, 3127, 3324
Bse21I	CCTNAGG	1 cut(s)	1840
Bse3DI	GCAATG	6 cut(s)	224, 554, 978, 1272, 1563, 2136
BseBI	CCWGG	2 cut(s)	602, 1955
BseDI	CCNNGG	7 cut(s)	1540, 1541, 1780, 1953, 1968, 1984, 2049
BseGI	GGATG	4 cut(s)	52, 484, 1177, 2836
BseLI	CCNNNNNNNGG	6 cut(s)	62, 1277, 2228, 2485, 2638, 2939
BseMI	GCAATG	6 cut(s)	224, 554, 978, 1272, 1563, 2136
BseMII	CTCAG	7 cut(s)	117, 656, 1428, 1641, 1854, 1904, 2765
BseNI	ACTGG	9 cut(s)	980, 1224, 1688, 2044, 2643, 2944, 2949, 3127, 3324
BseRI	GAGGAG	4 cut(s)	2793, 3177, 3201, 3224
BseSI	GKGCMC	1 cut(s)	1614
BseXI	GCAGC	9 cut(s)	97, 230, 315, 778, 2024, 2364, 2668, 2726, 3181
BseYI	CCCAGC	1 cut(s)	3098
BsgI	GTGCAG	3 cut(s)	1302, 2031, 3300
BshFI	GGCC	7 cut(s)	38, 67, 856, 1125, 1304, 1539, 2000
BshNI	GGYRCC	4 cut(s)	868, 1115, 2945, 3125
BshTI	ACCGGT	1 cut(s)	3128
BsiHKAI	GWGCWC	2 cut(s)	1614, 2215
BsiHKCI	CYCGRG	1 cut(s)	1541
BsiSI	CCGG	7 cut(s)	68, 1278, 1542, 1829, 2688, 3020, 3129
BslI	CCNNNNNNNGG	6 cut(s)	62, 1277, 2228, 2485, 2638, 2939
BsmAI	GTCTC	9 cut(s)	1330, 1391, 1610, 2153, 2364, 2438, 2770, 3018, 3198
BsmBI	CGTCTC	3 cut(s)	2153, 3018, 3198
BsmI	GAATGC	1 cut(s)	1801
BsnI	GGCC	7 cut(s)	38, 67, 856, 1125, 1304, 1539, 2000
Bso31I	GGTCTC	3 cut(s)	1330, 1391, 2438
BsoBI	CYCGRG	1 cut(s)	1541
Bsp1286I	GDGCHC	4 cut(s)	835, 1614, 2215, 2899
Bsp1407I	TGTACA	2 cut(s)	359, 880
Bsp143I	GATC	8 cut(s)	454, 1012, 1659, 2548, 2908, 3064, 3085, 3404
Bsp19I	CCATGG	1 cut(s)	2049
BspACI	CCGC	6 cut(s)	216, 388, 593, 1157, 2468, 2632
BspANI	GGCC	7 cut(s)	38, 67, 856, 1125, 1304, 1539, 2000
BspCNI	CTCAG	7 cut(s)	116, 657, 1429, 1640, 1853, 1903, 2766
BspHI	TCATGA	4 cut(s)	1633, 2362, 2962, 3088
BspLI	GGNNCC	9 cut(s)	66, 870, 978, 1117, 1540, 2947, 3105, 3127, 3406
BspMAI	CTGCAG	3 cut(s)	333, 1924, 2716
BspPI	GGATC	6 cut(s)	1007, 1654, 2556, 3059, 3399, 3412
BspQI	GCTCTTC	1 cut(s)	3306
BspT107I	GGYRCC	4 cut(s)	868, 1115, 2945, 3125
BspTNI	GGTCTC	3 cut(s)	1330, 1391, 2438
BsrBI	CCGCTC	1 cut(s)	390
BsrDI	GCAATG	6 cut(s)	224, 554, 978, 1272, 1563, 2136
BsrFI	RCCGGY	2 cut(s)	1277, 3128
BsrGI	TGTACA	2 cut(s)	359, 880
BsrI	ACTGG	9 cut(s)	980, 1224, 1688, 2044, 2643, 2944, 2949, 3127, 3324
BssAI	RCCGGY	2 cut(s)	1277, 3128
BssECI	CCNNGG	7 cut(s)	1540, 1541, 1780, 1953, 1968, 1984, 2049
BssMI	GATC	8 cut(s)	454, 1012, 1659, 2548, 2908, 3064, 3085, 3404
BssSI	CACGAG	2 cut(s)	834, 1613
BssT1I	CCWWGG	3 cut(s)	1780, 1984, 2049
Bst2BI	CACGAG	2 cut(s)	834, 1613
Bst2UI	CCWGG	2 cut(s)	602, 1955
Bst6I	CTCTTC	4 cut(s)	9, 582, 810, 3306
BstAUI	TGTACA	2 cut(s)	359, 880
BstBAI	YACGTR	1 cut(s)	3356
BstC8I	GCNNGC	9 cut(s)	189, 952, 1200, 2023, 2211, 2499, 2535, 2719, 3297
BstDEI	CTNAG	8 cut(s)	103, 665, 1437, 1627, 1840, 1890, 1909, 2774
BstDSI	CCRYGG	2 cut(s)	1968, 2049
BstENI	CCTNNNNNAGG	1 cut(s)	2483
BstF5I	GGATG	4 cut(s)	52, 484, 1177, 2836
BstH2I	RGCGCY	2 cut(s)	1587, 1839
BstHHI	GCGC	2 cut(s)	1586, 1838
BstKTI	GATC	8 cut(s)	457, 1015, 1662, 2551, 2911, 3067, 3088, 3407
BstMAI	GTCTC	9 cut(s)	1330, 1391, 1610, 2153, 2364, 2438, 2770, 3018, 3198
BstMBI	GATC	8 cut(s)	454, 1012, 1659, 2548, 2908, 3064, 3085, 3404
BstMWI	GCNNNNNNNGC	1 cut(s)	2018
BstNI	CCWGG	2 cut(s)	602, 1955
BstNSI	RCATGY	3 cut(s)	932, 954, 1523
BstSCI	CCNGG	6 cut(s)	600, 1540, 1541, 1827, 1953, 3018
BstSFI	CTRYAG	5 cut(s)	329, 945, 1209, 1920, 2712
BstSLI	GKGCMC	1 cut(s)	1614
BstV1I	GCAGC	9 cut(s)	97, 230, 315, 778, 2024, 2364, 2668, 2726, 3181
BstV2I	GAAGAC	3 cut(s)	723, 1220, 2103
BstX2I	RGATCY	3 cut(s)	1012, 2548, 3404
BstXI	CCANNNNNNTGG	1 cut(s)	2572
BstYI	RGATCY	3 cut(s)	1012, 2548, 3404
Bsu36I	CCTNAGG	1 cut(s)	1840
BsuRI	GGCC	7 cut(s)	38, 67, 856, 1125, 1304, 1539, 2000
BtgI	CCRYGG	2 cut(s)	1968, 2049
BtsCI	GGATG	4 cut(s)	52, 484, 1177, 2836
BtsI	GCAGTG	2 cut(s)	338, 961
BtsIMutI	CAGTG	9 cut(s)	338, 961, 1159, 1609, 1871, 2771, 2956, 3120, 3317
Cac8I	GCNNGC	9 cut(s)	189, 952, 1200, 2023, 2211, 2499, 2535, 2719, 3297
CaiI	CAGNNNCTG	2 cut(s)	110, 337
CciI	TCATGA	4 cut(s)	1633, 2362, 2962, 3088
CfoI	GCGC	2 cut(s)	1586, 1838
Cfr10I	RCCGGY	2 cut(s)	1277, 3128
Cfr9I	CCCGGG	1 cut(s)	1541
CseI	GACGC	1 cut(s)	731
CspAI	ACCGGT	1 cut(s)	3128
CspCI	CAANNNNNGTGG	2 cut(s)	2724, 2759
DdeI	CTNAG	8 cut(s)	103, 665, 1437, 1627, 1840, 1890, 1909, 2774
DpnI	GATC	8 cut(s)	456, 1014, 1661, 2550, 2910, 3066, 3087, 3406
DpnII	GATC	8 cut(s)	454, 1012, 1659, 2548, 2908, 3064, 3085, 3404
DraI	TTTAAA	2 cut(s)	517, 1579
EaeI	YGGCCR	2 cut(s)	1302, 1998
Eam1104I	CTCTTC	4 cut(s)	9, 582, 810, 3306
EarI	CTCTTC	4 cut(s)	9, 582, 810, 3306
EciI	GGCGGA	1 cut(s)	608
Ecl136II	GAGCTC	1 cut(s)	2213
Eco130I	CCWWGG	3 cut(s)	1780, 1984, 2049
Eco147I	AGGCCT	1 cut(s)	1125
Eco24I	GRGCYC	3 cut(s)	835, 2215, 2899
Eco31I	GGTCTC	3 cut(s)	1330, 1391, 2438
Eco32I	GATATC	2 cut(s)	201, 374
Eco47I	GGWCC	8 cut(s)	46, 213, 385, 1328, 1777, 2870, 3131, 3265
Eco53kI	GAGCTC	1 cut(s)	2213
Eco57I	CTGAAG	6 cut(s)	33, 251, 1434, 1695, 1746, 2682
Eco81I	CCTNAGG	1 cut(s)	1840
Eco88I	CYCGRG	1 cut(s)	1541
EcoICRI	GAGCTC	1 cut(s)	2213
EcoNI	CCTNNNNNAGG	1 cut(s)	2483
EcoO109I	RGGNCCY	2 cut(s)	46, 2870
EcoRI	GAATTC	1 cut(s)	605
EcoRII	CCWGG	2 cut(s)	600, 1953
EcoRV	GATATC	2 cut(s)	201, 374
EcoT14I	CCWWGG	3 cut(s)	1780, 1984, 2049
EcoT22I	ATGCAT	1 cut(s)	1563
EcoT38I	GRGCYC	3 cut(s)	835, 2215, 2899
ErhI	CCWWGG	3 cut(s)	1780, 1984, 2049
Esp3I	CGTCTC	3 cut(s)	2153, 3018, 3198
FalI	AAGNNNNNCTT	6 cut(s)	243, 275, 1773, 1805, 2481, 2513
FauNDI	CATATG	1 cut(s)	2526
FbaI	TGATCA	1 cut(s)	3085
FblI	GTMKAC	1 cut(s)	2920
Fnu4HI	GCNGC	9 cut(s)	111, 219, 329, 767, 2013, 2378, 2657, 2715, 3170
FokI	GGATG	4 cut(s)	39, 491, 1184, 2823
FriOI	GRGCYC	3 cut(s)	835, 2215, 2899
Fsp4HI	GCNGC	9 cut(s)	111, 219, 329, 767, 2013, 2378, 2657, 2715, 3170
FspBI	CTAG	7 cut(s)	366, 452, 1481, 1881, 2681, 3255, 3399
GlaI	GCGC	2 cut(s)	1585, 1837
GluI	GCNGC	9 cut(s)	111, 219, 329, 767, 2013, 2378, 2657, 2715, 3170
GsaI	CCCAGC	1 cut(s)	3102
GsuI	CTGGAG	5 cut(s)	963, 1752, 2619, 2961, 3341
HaeII	RGCGCY	2 cut(s)	1587, 1839
HaeIII	GGCC	7 cut(s)	38, 67, 856, 1125, 1304, 1539, 2000
HapII	CCGG	7 cut(s)	68, 1278, 1542, 1829, 2688, 3020, 3129
HgaI	GACGC	1 cut(s)	731
HhaI	GCGC	2 cut(s)	1586, 1838
Hin6I	GCGC	2 cut(s)	1584, 1836
HinP1I	GCGC	2 cut(s)	1584, 1836
HincII	GTYRAC	3 cut(s)	2045, 2629, 2730
HindII	GTYRAC	3 cut(s)	2045, 2629, 2730
HindIII	AAGCTT	1 cut(s)	2019
HpaII	CCGG	7 cut(s)	68, 1278, 1542, 1829, 2688, 3020, 3129
HphI	GGTGA	7 cut(s)	913, 1466, 1784, 1868, 1956, 2105, 3263
Hpy99I	CGWCG	1 cut(s)	2072
HpyCH4IV	ACGT	1 cut(s)	3355
HpyF10VI	GCNNNNNNNGC	1 cut(s)	2018
HpyF3I	CTNAG	8 cut(s)	103, 665, 1437, 1627, 1840, 1890, 1909, 2774
HpySE526I	ACGT	1 cut(s)	3355
HspAI	GCGC	2 cut(s)	1584, 1836
KpnI	GGTACC	2 cut(s)	2949, 3129
Ksp22I	TGATCA	1 cut(s)	3085
Kzo9I	GATC	8 cut(s)	454, 1012, 1659, 2548, 2908, 3064, 3085, 3404
LguI	GCTCTTC	1 cut(s)	3306
LmnI	GCTCC	4 cut(s)	982, 2457, 2773, 3237
Lsp1109I	GCAGC	9 cut(s)	97, 230, 315, 778, 2024, 2364, 2668, 2726, 3181
LweI	GCATC	4 cut(s)	97, 286, 2614, 3320
MaeI	CTAG	7 cut(s)	366, 452, 1481, 1881, 2681, 3255, 3399
MaeII	ACGT	1 cut(s)	3355
MaeIII	GTNAC	7 cut(s)	447, 931, 1174, 2269, 2988, 3118, 3269
MalI	GATC	8 cut(s)	456, 1014, 1661, 2550, 2910, 3066, 3087, 3406
MbiI	CCGCTC	1 cut(s)	390
MboI	GATC	8 cut(s)	454, 1012, 1659, 2548, 2908, 3064, 3085, 3404
MfeI	CAATTG	2 cut(s)	289, 2381
MflI	RGATCY	3 cut(s)	1012, 2548, 3404
MhlI	GDGCHC	4 cut(s)	835, 1614, 2215, 2899
MlsI	TGGCCA	1 cut(s)	2000
MluNI	TGGCCA	1 cut(s)	2000
MlyI	GAGTC	3 cut(s)	632, 1757, 2093
MmeI	TCCRAC	4 cut(s)	191, 1379, 1509, 2479
Mox20I	TGGCCA	1 cut(s)	2000
Mph1103I	ATGCAT	1 cut(s)	1563
MroXI	GAANNNNTTC	3 cut(s)	132, 1464, 2307
MscI	TGGCCA	1 cut(s)	2000
MseI	TTAA	9 cut(s)	165, 282, 516, 788, 1131, 1578, 2481, 2519, 3161
MslI	CAYNNNNRTG	3 cut(s)	1647, 2610, 3087
Msp20I	TGGCCA	1 cut(s)	2000
MspA1I	CMGCKG	2 cut(s)	769, 923
MspI	CCGG	7 cut(s)	68, 1278, 1542, 1829, 2688, 3020, 3129
MspR9I	CCNGG	6 cut(s)	602, 1542, 1543, 1829, 1955, 3020
MunI	CAATTG	2 cut(s)	289, 2381
Mva1269I	GAATGC	1 cut(s)	1801
MvaI	CCWGG	2 cut(s)	602, 1955
MwoI	GCNNNNNNNGC	1 cut(s)	2018
NciI	CCSGG	4 cut(s)	1542, 1543, 1829, 3020
NcoI	CCATGG	1 cut(s)	2049
NdeI	CATATG	1 cut(s)	2526
NdeII	GATC	8 cut(s)	454, 1012, 1659, 2548, 2908, 3064, 3085, 3404
NlaIV	GGNNCC	9 cut(s)	66, 870, 978, 1117, 1540, 2947, 3105, 3127, 3406
NmuCI	GTSAC	4 cut(s)	447, 2988, 3118, 3269
NsiI	ATGCAT	1 cut(s)	1563
NspI	RCATGY	3 cut(s)	932, 954, 1523
PaeI	GCATGC	1 cut(s)	954
PagI	TCATGA	4 cut(s)	1633, 2362, 2962, 3088
PceI	AGGCCT	1 cut(s)	1125
PciI	ACATGT	1 cut(s)	928
PciSI	GCTCTTC	1 cut(s)	3306
PcsI	WCGNNNNNNNCGW	1 cut(s)	3361
PctI	GAATGC	1 cut(s)	1801
PdmI	GAANNNNTTC	3 cut(s)	132, 1464, 2307
PfoI	TCCNGGA	1 cut(s)	3018
PinAI	ACCGGT	1 cut(s)	3128
PkrI	GCNGC	9 cut(s)	112, 220, 330, 768, 2014, 2379, 2658, 2716, 3171
PleI	GAGTC	3 cut(s)	631, 1756, 2093
PpsI	GAGTC	3 cut(s)	631, 1756, 2093
Ppu21I	YACGTR	1 cut(s)	3356
PpuMI	RGGWCCY	2 cut(s)	46, 2870
PscI	ACATGT	1 cut(s)	928
PshBI	ATTAAT	2 cut(s)	1131, 2519
PsiI	TTATAA	1 cut(s)	1217
Psp124BI	GAGCTC	1 cut(s)	2215
Psp5II	RGGWCCY	2 cut(s)	46, 2870
Psp6I	CCWGG	2 cut(s)	600, 1953
PspFI	CCCAGC	1 cut(s)	3098
PspGI	CCWGG	2 cut(s)	600, 1953
PspN4I	GGNNCC	9 cut(s)	66, 870, 978, 1117, 1540, 2947, 3105, 3127, 3406
PspPPI	RGGWCCY	2 cut(s)	46, 2870
PsrI	GAACNNNNNNTAC	2 cut(s)	3349, 3381
PstI	CTGCAG	3 cut(s)	333, 1924, 2716
PstNI	CAGNNNCTG	2 cut(s)	110, 337
PsuI	RGATCY	3 cut(s)	1012, 2548, 3404
PvuII	CAGCTG	2 cut(s)	769, 923
RseI	CAYNNNNRTG	3 cut(s)	1647, 2610, 3087
SacI	GAGCTC	1 cut(s)	2215
SapI	GCTCTTC	1 cut(s)	3306
SaqAI	TTAA	9 cut(s)	165, 282, 516, 788, 1131, 1578, 2481, 2519, 3161
SatI	GCNGC	9 cut(s)	111, 219, 329, 767, 2013, 2378, 2657, 2715, 3170
Sau3AI	GATC	8 cut(s)	454, 1012, 1659, 2548, 2908, 3064, 3085, 3404
SchI	GAGTC	3 cut(s)	632, 1757, 2093
ScrFI	CCNGG	6 cut(s)	602, 1542, 1543, 1829, 1955, 3020
SduI	GDGCHC	4 cut(s)	835, 1614, 2215, 2899
SfaNI	GCATC	4 cut(s)	97, 286, 2614, 3320
SfcI	CTRYAG	5 cut(s)	329, 945, 1209, 1920, 2712
SinI	GGWCC	8 cut(s)	46, 213, 385, 1328, 1777, 2870, 3131, 3265
SmaI	CCCGGG	1 cut(s)	1543
SmiMI	CAYNNNNRTG	3 cut(s)	1647, 2610, 3087
SmlI	CTYRAG	4 cut(s)	32, 755, 2354, 2874
SmoI	CTYRAG	4 cut(s)	32, 755, 2354, 2874
SpeI	ACTAGT	1 cut(s)	1880
SphI	GCATGC	1 cut(s)	954
SseBI	AGGCCT	1 cut(s)	1125
SsiI	CCGC	6 cut(s)	216, 388, 593, 1157, 2468, 2632
SspI	AATATT	1 cut(s)	1135
SspMI	CTAG	7 cut(s)	366, 452, 1481, 1881, 2681, 3255, 3399
SstI	GAGCTC	1 cut(s)	2215
StuI	AGGCCT	1 cut(s)	1125
StyD4I	CCNGG	6 cut(s)	600, 1540, 1541, 1827, 1953, 3018
StyI	CCWWGG	3 cut(s)	1780, 1984, 2049
TaiI	ACGT	1 cut(s)	3358
TaqI	TCGA	2 cut(s)	1323, 2893
TatI	WGTACW	4 cut(s)	359, 880, 1406, 1883
Tru1I	TTAA	9 cut(s)	165, 282, 516, 788, 1131, 1578, 2481, 2519, 3161
Tru9I	TTAA	9 cut(s)	165, 282, 516, 788, 1131, 1578, 2481, 2519, 3161
TscAI	CASTG	9 cut(s)	338, 961, 1159, 1609, 1871, 2778, 2956, 3127, 3324
TseFI	GTSAC	4 cut(s)	447, 2988, 3118, 3269
TseI	GCWGC	9 cut(s)	110, 218, 328, 766, 2012, 2377, 2656, 2714, 3169
Tsp45I	GTSAC	4 cut(s)	447, 2988, 3118, 3269
TspGWI	ACGGA	5 cut(s)	1786, 3106, 3180, 3257, 3299
TspMI	CCCGGG	1 cut(s)	1541
TspRI	CASTG	9 cut(s)	338, 961, 1159, 1609, 1871, 2778, 2956, 3127, 3324
VneI	GTGCAC	1 cut(s)	1610
VpaK11BI	GGWCC	8 cut(s)	46, 213, 385, 1328, 1777, 2870, 3131, 3265
VspI	ATTAAT	2 cut(s)	1131, 2519
XagI	CCTNNNNNAGG	1 cut(s)	2483
XceI	RCATGY	3 cut(s)	932, 954, 1523
XmaI	CCCGGG	1 cut(s)	1541
XmiI	GTMKAC	1 cut(s)	2920
XmnI	GAANNNNTTC	3 cut(s)	132, 1464, 2307
XspI	CTAG	7 cut(s)	366, 452, 1481, 1881, 2681, 3255, 3399
Zsp2I	ATGCAT	1 cut(s)	1563

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.