helicase protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MOM1 | PF25029 | 43 - 159 | 2.7e-43 | MOM1-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 313 |
| AccB1I | GGYRCC | 2 cut(s) | 1241, 1505 |
| AciI | CCGC | 2 cut(s) | 1509, 2805 |
| AclWI | GGATC | 3 cut(s) | 1591, 1822, 2715 |
| AcuI | CTGAAG | 8 cut(s) | 30, 344, 1330, 1353, 1752, 1863, 1914, 2004 |
| AfaI | GTAC | 5 cut(s) | 240, 439, 1564, 2142, 2209 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 2644, 2811 |
| AflIII | ACRYGT | 2 cut(s) | 90, 408 |
| AjnI | CCWGG | 2 cut(s) | 732, 2121 |
| Alw26I | GTCTC | 6 cut(s) | 468, 619, 1547, 1778, 2523, 2597 |
| AlwI | GGATC | 3 cut(s) | 1591, 1822, 2715 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 203, 430, 2149 |
| Ama87I | CYCGRG | 1 cut(s) | 2697 |
| AoxI | GGCC | 3 cut(s) | 158, 986, 1659 |
| AseI | ATTAAT | 1 cut(s) | 2678 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 225, 644, 1371 |
| AspS9I | GGNCC | 6 cut(s) | 139, 505, 1113, 1451, 1590, 1945 |
| AsuHPI | GGTGA | 4 cut(s) | 584, 1952, 2036, 2124 |
| AsuII | TTCGAA | 1 cut(s) | 769 |
| AvaI | CYCGRG | 1 cut(s) | 2697 |
| AvaII | GGWCC | 6 cut(s) | 139, 505, 1113, 1451, 1590, 1945 |
| AxyI | CCTNAGG | 1 cut(s) | 2008 |
| BanI | GGYRCC | 2 cut(s) | 1241, 1505 |
| BanII | GRGCYC | 1 cut(s) | 967 |
| BbsI | GAAGAC | 4 cut(s) | 111, 855, 1343, 2340 |
| BbvCI | CCTCAGC | 1 cut(s) | 1284 |
| BciT130I | CCWGG | 2 cut(s) | 734, 2123 |
| BciVI | GTATCC | 1 cut(s) | 1831 |
| BclI | TGATCA | 1 cut(s) | 1210 |
| BcoDI | GTCTC | 6 cut(s) | 468, 619, 1547, 1778, 2523, 2597 |
| BfaI | CTAG | 4 cut(s) | 1418, 1487, 1697, 2854 |
| BfmI | CTRYAG | 4 cut(s) | 309, 422, 456, 2088 |
| BfuI | GTATCC | 1 cut(s) | 1831 |
| BglII | AGATCT | 1 cut(s) | 1740 |
| Bme1390I | CCNGG | 2 cut(s) | 734, 2123 |
| Bme18I | GGWCC | 6 cut(s) | 139, 505, 1113, 1451, 1590, 1945 |
| BmeT110I | CYCGRG | 1 cut(s) | 2697 |
| BmgT120I | GGNCC | 6 cut(s) | 139, 505, 1113, 1451, 1590, 1945 |
| BmiI | GGNNCC | 4 cut(s) | 1243, 1507, 1536, 1591 |
| BmrFI | CCNGG | 2 cut(s) | 734, 2123 |
| BmsI | GCATC | 7 cut(s) | 190, 379, 505, 988, 1393, 2239, 2773 |
| BpiI | GAAGAC | 4 cut(s) | 111, 855, 1343, 2340 |
| BpmI | CTGGAG | 3 cut(s) | 1521, 1920, 2778 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1284 |
| Bpu14I | TTCGAA | 1 cut(s) | 769 |
| BpuEI | CTTGAG | 3 cut(s) | 143, 872, 2498 |
| BsaAI | YACGTR | 1 cut(s) | 409 |
| BsaI | GGTCTC | 1 cut(s) | 1547 |
| BsaJI | CCNNGG | 6 cut(s) | 1026, 1948, 2121, 2136, 2157, 2203 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1662, 1692 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 2644, 2811 |
| Bse1I | ACTGG | 3 cut(s) | 1538, 1637, 2816 |
| Bse21I | CCTNAGG | 1 cut(s) | 2008 |
| Bse3DI | GCAATG | 4 cut(s) | 317, 423, 1719, 2373 |
| BseBI | CCWGG | 2 cut(s) | 734, 2123 |
| BseDI | CCNNGG | 6 cut(s) | 1026, 1948, 2121, 2136, 2157, 2203 |
| BseGI | GGATG | 3 cut(s) | 145, 616, 1303 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 2644, 2811 |
| BseMI | GCAATG | 4 cut(s) | 317, 423, 1719, 2373 |
| BseMII | CTCAG | 7 cut(s) | 143, 210, 996, 1143, 1275, 2022, 2072 |
| BseNI | ACTGG | 3 cut(s) | 1538, 1637, 2816 |
| BsgI | GTGCAG | 2 cut(s) | 996, 2253 |
| BshFI | GGCC | 3 cut(s) | 160, 988, 1661 |
| BshNI | GGYRCC | 2 cut(s) | 1241, 1505 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2697 |
| BslFI | GGGAC | 1 cut(s) | 1071 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 2644, 2811 |
| BsmAI | GTCTC | 6 cut(s) | 468, 619, 1547, 1778, 2523, 2597 |
| BsmFI | GGGAC | 1 cut(s) | 1071 |
| BsmI | GAATGC | 1 cut(s) | 1373 |
| BsnI | GGCC | 3 cut(s) | 160, 988, 1661 |
| Bso31I | GGTCTC | 1 cut(s) | 1547 |
| BsoBI | CYCGRG | 1 cut(s) | 2697 |
| Bsp119I | TTCGAA | 1 cut(s) | 769 |
| Bsp1286I | GDGCHC | 1 cut(s) | 967 |
| Bsp143I | GATC | 7 cut(s) | 25, 1210, 1596, 1740, 1827, 2417, 2707 |
| Bsp19I | CCATGG | 1 cut(s) | 2203 |
| BspACI | CCGC | 2 cut(s) | 1509, 2805 |
| BspANI | GGCC | 3 cut(s) | 160, 988, 1661 |
| BspCNI | CTCAG | 7 cut(s) | 142, 209, 997, 1144, 1276, 2021, 2071 |
| BspHI | TCATGA | 5 cut(s) | 967, 1207, 1570, 1801, 2521 |
| BspLI | GGNNCC | 4 cut(s) | 1243, 1507, 1536, 1591 |
| BspMAI | CTGCAG | 4 cut(s) | 313, 426, 460, 2092 |
| BspPI | GGATC | 3 cut(s) | 1591, 1822, 2715 |
| BspT104I | TTCGAA | 1 cut(s) | 769 |
| BspT107I | GGYRCC | 2 cut(s) | 1241, 1505 |
| BspTNI | GGTCTC | 1 cut(s) | 1547 |
| BsrDI | GCAATG | 4 cut(s) | 317, 423, 1719, 2373 |
| BsrI | ACTGG | 3 cut(s) | 1538, 1637, 2816 |
| BssECI | CCNNGG | 6 cut(s) | 1026, 1948, 2121, 2136, 2157, 2203 |
| BssMI | GATC | 7 cut(s) | 25, 1210, 1596, 1740, 1827, 2417, 2707 |
| BssT1I | CCWWGG | 3 cut(s) | 1948, 2157, 2203 |
| Bst2UI | CCWGG | 2 cut(s) | 734, 2123 |
| Bst4CI | ACNGT | 8 cut(s) | 1027, 1261, 1435, 1529, 1772, 1876, 2129, 2459 |
| Bst6I | CTCTTC | 3 cut(s) | 714, 2451, 2488 |
| BstBAI | YACGTR | 1 cut(s) | 409 |
| BstBI | TTCGAA | 1 cut(s) | 769 |
| BstC8I | GCNNGC | 6 cut(s) | 282, 913, 917, 1078, 2260, 2658 |
| BstDEI | CTNAG | 8 cut(s) | 129, 196, 1005, 1152, 1284, 2008, 2058, 2077 |
| BstDSI | CCRYGG | 2 cut(s) | 1026, 2203 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2642 |
| BstF5I | GGATG | 3 cut(s) | 145, 616, 1303 |
| BstKTI | GATC | 7 cut(s) | 28, 1213, 1599, 1743, 1830, 2420, 2710 |
| BstMAI | GTCTC | 6 cut(s) | 468, 619, 1547, 1778, 2523, 2597 |
| BstMBI | GATC | 7 cut(s) | 25, 1210, 1596, 1740, 1827, 2417, 2707 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 2189 |
| BstNI | CCWGG | 2 cut(s) | 734, 2123 |
| BstNSI | RCATGY | 3 cut(s) | 94, 1080, 1679 |
| BstSCI | CCNGG | 2 cut(s) | 732, 2121 |
| BstSFI | CTRYAG | 4 cut(s) | 309, 422, 456, 2088 |
| BstV2I | GAAGAC | 4 cut(s) | 111, 855, 1343, 2340 |
| BstX2I | RGATCY | 3 cut(s) | 1596, 1740, 2707 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2204 |
| BstYI | RGATCY | 3 cut(s) | 1596, 1740, 2707 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2008 |
| BsuI | GTATCC | 1 cut(s) | 1831 |
| BsuRI | GGCC | 3 cut(s) | 160, 988, 1661 |
| BtgI | CCRYGG | 2 cut(s) | 1026, 2203 |
| BtsCI | GGATG | 3 cut(s) | 145, 616, 1303 |
| BtsI | GCAGTG | 2 cut(s) | 431, 1413 |
| BtsIMutI | CAGTG | 5 cut(s) | 431, 1413, 1534, 1545, 1644 |
| Cac8I | GCNNGC | 6 cut(s) | 282, 913, 917, 1078, 2260, 2658 |
| CaiI | CAGNNNCTG | 3 cut(s) | 203, 430, 2149 |
| CciI | TCATGA | 5 cut(s) | 967, 1207, 1570, 1801, 2521 |
| Cfr13I | GGNCC | 6 cut(s) | 139, 505, 1113, 1451, 1590, 1945 |
| CseI | GACGC | 2 cut(s) | 303, 863 |
| Csp6I | GTAC | 5 cut(s) | 239, 438, 1563, 2141, 2208 |
| CviQI | GTAC | 5 cut(s) | 239, 438, 1563, 2141, 2208 |
| DdeI | CTNAG | 8 cut(s) | 129, 196, 1005, 1152, 1284, 2008, 2058, 2077 |
| DpnI | GATC | 7 cut(s) | 27, 1212, 1598, 1742, 1829, 2419, 2709 |
| DpnII | GATC | 7 cut(s) | 25, 1210, 1596, 1740, 1827, 2417, 2707 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 313 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 313 |
| Eam1104I | CTCTTC | 3 cut(s) | 714, 2451, 2488 |
| EarI | CTCTTC | 3 cut(s) | 714, 2451, 2488 |
| Eco130I | CCWWGG | 3 cut(s) | 1948, 2157, 2203 |
| Eco24I | GRGCYC | 1 cut(s) | 967 |
| Eco31I | GGTCTC | 1 cut(s) | 1547 |
| Eco32I | GATATC | 1 cut(s) | 294 |
| Eco47I | GGWCC | 6 cut(s) | 139, 505, 1113, 1451, 1590, 1945 |
| Eco57I | CTGAAG | 8 cut(s) | 30, 344, 1330, 1353, 1752, 1863, 1914, 2004 |
| Eco81I | CCTNAGG | 1 cut(s) | 2008 |
| Eco88I | CYCGRG | 1 cut(s) | 2697 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2642 |
| EcoO109I | RGGNCCY | 1 cut(s) | 139 |
| EcoRII | CCWGG | 2 cut(s) | 732, 2121 |
| EcoRV | GATATC | 1 cut(s) | 294 |
| EcoT14I | CCWWGG | 3 cut(s) | 1948, 2157, 2203 |
| EcoT38I | GRGCYC | 1 cut(s) | 967 |
| ErhI | CCWWGG | 3 cut(s) | 1948, 2157, 2203 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 336, 368, 1941, 1973, 2640, 2672 |
| FaqI | GGGAC | 1 cut(s) | 1071 |
| FbaI | TGATCA | 1 cut(s) | 1210 |
| FokI | GGATG | 3 cut(s) | 132, 623, 1310 |
| FriOI | GRGCYC | 1 cut(s) | 967 |
| FspBI | CTAG | 4 cut(s) | 1418, 1487, 1697, 2854 |
| GsuI | CTGGAG | 3 cut(s) | 1521, 1920, 2778 |
| HaeIII | GGCC | 3 cut(s) | 160, 988, 1661 |
| HgaI | GACGC | 2 cut(s) | 303, 863 |
| HincII | GTYRAC | 2 cut(s) | 2282, 2802 |
| HindII | GTYRAC | 2 cut(s) | 2282, 2802 |
| HindIII | AAGCTT | 1 cut(s) | 2256 |
| HphI | GGTGA | 4 cut(s) | 584, 1952, 2036, 2124 |
| Hpy166II | GTNNAC | 8 cut(s) | 403, 1234, 1454, 2132, 2174, 2282, 2665, 2802 |
| Hpy8I | GTNNAC | 8 cut(s) | 403, 1234, 1454, 2132, 2174, 2282, 2665, 2802 |
| HpyCH4III | ACNGT | 8 cut(s) | 1027, 1261, 1435, 1529, 1772, 1876, 2129, 2459 |
| HpyCH4IV | ACGT | 1 cut(s) | 408 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 2189 |
| HpyF3I | CTNAG | 8 cut(s) | 129, 196, 1005, 1152, 1284, 2008, 2058, 2077 |
| HpySE526I | ACGT | 1 cut(s) | 408 |
| Ksp22I | TGATCA | 1 cut(s) | 1210 |
| Kzo9I | GATC | 7 cut(s) | 25, 1210, 1596, 1740, 1827, 2417, 2707 |
| LmnI | GCTCC | 1 cut(s) | 1540 |
| LweI | GCATC | 7 cut(s) | 190, 379, 505, 988, 1393, 2239, 2773 |
| MaeI | CTAG | 4 cut(s) | 1418, 1487, 1697, 2854 |
| MaeII | ACGT | 1 cut(s) | 408 |
| MalI | GATC | 7 cut(s) | 27, 1212, 1598, 1742, 1829, 2419, 2709 |
| MboI | GATC | 7 cut(s) | 25, 1210, 1596, 1740, 1827, 2417, 2707 |
| MfeI | CAATTG | 3 cut(s) | 382, 680, 2540 |
| MflI | RGATCY | 3 cut(s) | 1596, 1740, 2707 |
| MhlI | GDGCHC | 1 cut(s) | 967 |
| MlyI | GAGTC | 6 cut(s) | 470, 764, 1016, 1925, 2285, 2330 |
| MmeI | TCCRAC | 3 cut(s) | 284, 1243, 2638 |
| MroXI | GAANNNNTTC | 3 cut(s) | 225, 644, 1371 |
| MslI | CAYNNNNRTG | 5 cut(s) | 513, 1025, 1606, 1608, 2301 |
| MspA1I | CMGCKG | 2 cut(s) | 901, 1055 |
| MspR9I | CCNGG | 2 cut(s) | 734, 2123 |
| MunI | CAATTG | 3 cut(s) | 382, 680, 2540 |
| Mva1269I | GAATGC | 1 cut(s) | 1373 |
| MvaI | CCWGG | 2 cut(s) | 734, 2123 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 2189 |
| NcoI | CCATGG | 1 cut(s) | 2203 |
| NdeII | GATC | 7 cut(s) | 25, 1210, 1596, 1740, 1827, 2417, 2707 |
| NlaIV | GGNNCC | 4 cut(s) | 1243, 1507, 1536, 1591 |
| NmuCI | GTSAC | 5 cut(s) | 535, 556, 572, 579, 1639 |
| NspI | RCATGY | 3 cut(s) | 94, 1080, 1679 |
| NspV | TTCGAA | 1 cut(s) | 769 |
| PaeI | GCATGC | 1 cut(s) | 1080 |
| PagI | TCATGA | 5 cut(s) | 967, 1207, 1570, 1801, 2521 |
| PciI | ACATGT | 1 cut(s) | 90 |
| PctI | GAATGC | 1 cut(s) | 1373 |
| PdmI | GAANNNNTTC | 3 cut(s) | 225, 644, 1371 |
| PfeI | GAWTC | 8 cut(s) | 183, 347, 479, 1474, 1495, 1702, 1954, 2084 |
| PleI | GAGTC | 6 cut(s) | 469, 763, 1015, 1924, 2285, 2330 |
| PpsI | GAGTC | 6 cut(s) | 469, 763, 1015, 1924, 2285, 2330 |
| Ppu21I | YACGTR | 1 cut(s) | 409 |
| PpuMI | RGGWCCY | 1 cut(s) | 139 |
| PscI | ACATGT | 1 cut(s) | 90 |
| PshBI | ATTAAT | 1 cut(s) | 2678 |
| Psp5II | RGGWCCY | 1 cut(s) | 139 |
| Psp6I | CCWGG | 2 cut(s) | 732, 2121 |
| PspGI | CCWGG | 2 cut(s) | 732, 2121 |
| PspN4I | GGNNCC | 4 cut(s) | 1243, 1507, 1536, 1591 |
| PspPI | GGNCC | 6 cut(s) | 139, 505, 1113, 1451, 1590, 1945 |
| PspPPI | RGGWCCY | 1 cut(s) | 139 |
| PstI | CTGCAG | 4 cut(s) | 313, 426, 460, 2092 |
| PstNI | CAGNNNCTG | 3 cut(s) | 203, 430, 2149 |
| PsuI | RGATCY | 3 cut(s) | 1596, 1740, 2707 |
| PvuII | CAGCTG | 2 cut(s) | 901, 1055 |
| RsaI | GTAC | 5 cut(s) | 240, 439, 1564, 2142, 2209 |
| RsaNI | GTAC | 5 cut(s) | 239, 438, 1563, 2141, 2208 |
| RseI | CAYNNNNRTG | 5 cut(s) | 513, 1025, 1606, 1608, 2301 |
| Sau3AI | GATC | 7 cut(s) | 25, 1210, 1596, 1740, 1827, 2417, 2707 |
| Sau96I | GGNCC | 6 cut(s) | 139, 505, 1113, 1451, 1590, 1945 |
| SchI | GAGTC | 6 cut(s) | 470, 764, 1016, 1925, 2285, 2330 |
| ScrFI | CCNGG | 2 cut(s) | 734, 2123 |
| SduI | GDGCHC | 1 cut(s) | 967 |
| SfaNI | GCATC | 7 cut(s) | 190, 379, 505, 988, 1393, 2239, 2773 |
| SfcI | CTRYAG | 4 cut(s) | 309, 422, 456, 2088 |
| SfuI | TTCGAA | 1 cut(s) | 769 |
| SinI | GGWCC | 6 cut(s) | 139, 505, 1113, 1451, 1590, 1945 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 513, 1025, 1606, 1608, 2301 |
| SmlI | CTYRAG | 3 cut(s) | 122, 887, 2513 |
| SmoI | CTYRAG | 3 cut(s) | 122, 887, 2513 |
| SphI | GCATGC | 1 cut(s) | 1080 |
| SsiI | CCGC | 2 cut(s) | 1509, 2805 |
| SspMI | CTAG | 4 cut(s) | 1418, 1487, 1697, 2854 |
| StyD4I | CCNGG | 2 cut(s) | 732, 2121 |
| StyI | CCWWGG | 3 cut(s) | 1948, 2157, 2203 |
| TaaI | ACNGT | 8 cut(s) | 1027, 1261, 1435, 1529, 1772, 1876, 2129, 2459 |
| TaiI | ACGT | 1 cut(s) | 411 |
| TaqI | TCGA | 2 cut(s) | 28, 769 |
| TatI | WGTACW | 3 cut(s) | 238, 437, 1562 |
| TauI | GCSGC | 1 cut(s) | 1511 |
| TfiI | GAWTC | 8 cut(s) | 183, 347, 479, 1474, 1495, 1702, 1954, 2084 |
| TscAI | CASTG | 5 cut(s) | 431, 1413, 1534, 1545, 1644 |
| TseFI | GTSAC | 5 cut(s) | 535, 556, 572, 579, 1639 |
| Tsp45I | GTSAC | 5 cut(s) | 535, 556, 572, 579, 1639 |
| TspGWI | ACGGA | 2 cut(s) | 1813, 2682 |
| TspRI | CASTG | 5 cut(s) | 431, 1413, 1534, 1545, 1644 |
| VpaK11BI | GGWCC | 6 cut(s) | 139, 505, 1113, 1451, 1590, 1945 |
| VspI | ATTAAT | 1 cut(s) | 2678 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2642 |
| XbaI | TCTAGA | 1 cut(s) | 1486 |
| XceI | RCATGY | 3 cut(s) | 94, 1080, 1679 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2303 |
| XmnI | GAANNNNTTC | 3 cut(s) | 225, 644, 1371 |
| XspI | CTAG | 4 cut(s) | 1418, 1487, 1697, 2854 |