helicase protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MOM1 | PF25029 | 938 - 1059 | 1.6e-55 | MOM1-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 588 |
| AarI | CACCTGC | 1 cut(s) | 6371 |
| Acc36I | ACCTGC | 2 cut(s) | 5860, 6371 |
| Acc65I | GGTACC | 2 cut(s) | 4472, 5957 |
| AccB1I | GGYRCC | 6 cut(s) | 528, 4472, 5482, 5761, 5957, 6056 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 3194, 4357, 5662 |
| AccI | GTMKAC | 1 cut(s) | 912 |
| AciI | CCGC | 8 cut(s) | 1818, 2202, 3112, 3139, 4061, 4485, 4710, 5430 |
| AclI | AACGTT | 2 cut(s) | 568, 3732 |
| AclWI | GGATC | 8 cut(s) | 90, 103, 787, 1196, 3653, 5141, 5415, 6332 |
| AcoI | YGGCCR | 4 cut(s) | 2592, 4359, 4482, 4892 |
| AcvI | CACGTG | 1 cut(s) | 3047 |
| AcyI | GRCGYC | 2 cut(s) | 529, 665 |
| AdeI | CACNNNGTG | 1 cut(s) | 3439 |
| AflII | CTTAAG | 2 cut(s) | 136, 5411 |
| AflIII | ACRYGT | 4 cut(s) | 881, 2778, 4763, 6196 |
| AhlI | ACTAGT | 1 cut(s) | 4771 |
| AjnI | CCWGG | 8 cut(s) | 469, 1352, 2253, 2605, 4132, 5109, 5487, 5628 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1595, 1627, 5360, 5392 |
| AleI | CACNNNNGTG | 1 cut(s) | 179 |
| Alw21I | GWGCWC | 6 cut(s) | 1477, 2155, 3655, 4344, 5496, 5824 |
| Alw26I | GTCTC | 9 cut(s) | 70, 841, 1880, 4034, 4385, 4899, 5282, 5543, 5935 |
| Alw44I | GTGCAC | 4 cut(s) | 2151, 3651, 5492, 5820 |
| AlwI | GGATC | 8 cut(s) | 90, 103, 787, 1196, 3653, 5141, 5415, 6332 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 735, 1271, 1340, 4430, 5662 |
| Ama87I | CYCGRG | 4 cut(s) | 283, 1307, 3461, 4637 |
| AoxI | GGCC | 9 cut(s) | 1567, 2592, 4359, 4482, 4892, 5696, 6035, 6112, 6189 |
| ApaI | GGGCCC | 1 cut(s) | 6193 |
| ApaLI | GTGCAC | 4 cut(s) | 2151, 3651, 5492, 5820 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 4033, 4065 |
| AseI | ATTAAT | 1 cut(s) | 609 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 700, 1569, 2088, 2180, 2910, 3233, 3364 |
| Asp718I | GGTACC | 2 cut(s) | 4472, 5957 |
| AspLEI | GCGC | 2 cut(s) | 19, 531 |
| AspS9I | GGNCC | 6 cut(s) | 300, 467, 3953, 6113, 6189, 6190 |
| AsuC2I | CCSGG | 1 cut(s) | 3815 |
| AsuII | TTCGAA | 1 cut(s) | 1590 |
| AsuNHI | GCTAGC | 1 cut(s) | 5741 |
| AvaI | CYCGRG | 4 cut(s) | 283, 1307, 3461, 4637 |
| AvaII | GGWCC | 3 cut(s) | 300, 467, 3953 |
| BaeGI | GKGCMC | 6 cut(s) | 2155, 3655, 5496, 5824, 6010, 6193 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 117, 150, 4610, 4643, 5941, 5974 |
| BalI | TGGCCA | 1 cut(s) | 4361 |
| BamHI | GGATCC | 1 cut(s) | 95 |
| BanI | GGYRCC | 6 cut(s) | 528, 4472, 5482, 5761, 5957, 6056 |
| BanII | GRGCYC | 3 cut(s) | 188, 3930, 6193 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 730, 762, 1524, 1556 |
| BauI | CACGAG | 3 cut(s) | 501, 1890, 3619 |
| BbrPI | CACGTG | 1 cut(s) | 3047 |
| BbsI | GAAGAC | 3 cut(s) | 138, 1788, 3845 |
| Bbv12I | GWGCWC | 6 cut(s) | 1477, 2155, 3655, 4344, 5496, 5824 |
| BbvCI | CCTCAGC | 1 cut(s) | 5382 |
| BceAI | ACGGC | 3 cut(s) | 5606, 5901, 6127 |
| BciT130I | CCWGG | 8 cut(s) | 471, 1354, 2255, 2607, 4134, 5111, 5489, 5630 |
| BciVI | GTATCC | 2 cut(s) | 118, 4798 |
| BclI | TGATCA | 3 cut(s) | 1513, 4600, 4816 |
| BcnI | CCSGG | 1 cut(s) | 3815 |
| BcoDI | GTCTC | 9 cut(s) | 70, 841, 1880, 4034, 4385, 4899, 5282, 5543, 5935 |
| BcuI | ACTAGT | 1 cut(s) | 4771 |
| BfoI | RGCGCY | 1 cut(s) | 532 |
| BfrI | CTTAAG | 2 cut(s) | 136, 5411 |
| BfuAI | ACCTGC | 2 cut(s) | 5860, 6371 |
| BfuI | GTATCC | 2 cut(s) | 118, 4798 |
| BglII | AGATCT | 3 cut(s) | 1078, 1462, 1493 |
| BlpI | GCTNAGC | 2 cut(s) | 3051, 5448 |
| BmcAI | AGTACT | 3 cut(s) | 196, 1367, 3688 |
| Bme1390I | CCNGG | 9 cut(s) | 471, 1354, 2255, 2607, 3815, 4134, 5111, 5489, 5630 |
| Bme18I | GGWCC | 3 cut(s) | 300, 467, 3953 |
| BmeT110I | CYCGRG | 4 cut(s) | 283, 1307, 3461, 4637 |
| BmgT120I | GGNCC | 6 cut(s) | 300, 467, 3953, 6113, 6189, 6190 |
| BmrFI | CCNGG | 9 cut(s) | 471, 1354, 2255, 2607, 3815, 4134, 5111, 5489, 5630 |
| BmrI | ACTGGG | 7 cut(s) | 1378, 1955, 3699, 4275, 4758, 5865, 6365 |
| BmtI | GCTAGC | 1 cut(s) | 5745 |
| BmuI | ACTGGG | 7 cut(s) | 1378, 1955, 3699, 4275, 4758, 5865, 6365 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1300, 4404 |
| BpiI | GAAGAC | 3 cut(s) | 138, 1788, 3845 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 5932, 5964 |
| BpmI | CTGGAG | 4 cut(s) | 225, 813, 2358, 2643 |
| Bpu10I | CCTNAGC | 1 cut(s) | 5382 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 3051, 5448 |
| Bpu14I | TTCGAA | 1 cut(s) | 1590 |
| BpuEI | CTTGAG | 2 cut(s) | 236, 4883 |
| BpuMI | CCSGG | 1 cut(s) | 3815 |
| Bsa29I | ATCGAT | 1 cut(s) | 6286 |
| BsaAI | YACGTR | 2 cut(s) | 3047, 6005 |
| BsaHI | GRCGYC | 2 cut(s) | 529, 665 |
| BsaI | GGTCTC | 3 cut(s) | 4034, 4899, 5935 |
| BsaJI | CCNNGG | 8 cut(s) | 470, 523, 648, 4386, 5109, 5110, 5487, 5986 |
| BsaWI | WCCGGW | 1 cut(s) | 3848 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2637, 2667 |
| Bse3DI | GCAATG | 6 cut(s) | 1614, 1842, 2185, 5288, 5609, 6345 |
| BseBI | CCWGG | 8 cut(s) | 471, 1354, 2255, 2607, 4134, 5111, 5489, 5630 |
| BseCI | ATCGAT | 1 cut(s) | 6286 |
| BseDI | CCNNGG | 8 cut(s) | 470, 523, 648, 4386, 5109, 5110, 5487, 5986 |
| BseMI | GCAATG | 6 cut(s) | 1614, 1842, 2185, 5288, 5609, 6345 |
| BseRI | GAGGAG | 7 cut(s) | 228, 2069, 2355, 2525, 3320, 4401, 6216 |
| BseSI | GKGCMC | 6 cut(s) | 2155, 3655, 5496, 5824, 6010, 6193 |
| BseYI | CCCAGC | 5 cut(s) | 5771, 5801, 5831, 6010, 6072 |
| BsgI | GTGCAG | 6 cut(s) | 802, 3396, 3616, 4977, 5456, 6228 |
| BshFI | GGCC | 9 cut(s) | 1569, 2594, 4361, 4484, 4894, 5698, 6037, 6114, 6191 |
| BshNI | GGYRCC | 6 cut(s) | 528, 4472, 5482, 5761, 5957, 6056 |
| BshVI | ATCGAT | 1 cut(s) | 6286 |
| BsiHKAI | GWGCWC | 6 cut(s) | 1477, 2155, 3655, 4344, 5496, 5824 |
| BsiHKCI | CYCGRG | 4 cut(s) | 283, 1307, 3461, 4637 |
| BsiSI | CCGG | 3 cut(s) | 992, 3815, 3849 |
| BslFI | GGGAC | 5 cut(s) | 2251, 2458, 3797, 5128, 6055 |
| BsmAI | GTCTC | 9 cut(s) | 70, 841, 1880, 4034, 4385, 4899, 5282, 5543, 5935 |
| BsmFI | GGGAC | 5 cut(s) | 2251, 2458, 3797, 5128, 6055 |
| BsmI | GAATGC | 3 cut(s) | 1219, 1318, 4840 |
| BsnI | GGCC | 9 cut(s) | 1569, 2594, 4361, 4484, 4894, 5698, 6037, 6114, 6191 |
| Bso31I | GGTCTC | 3 cut(s) | 4034, 4899, 5935 |
| BsoBI | CYCGRG | 4 cut(s) | 283, 1307, 3461, 4637 |
| Bsp119I | TTCGAA | 1 cut(s) | 1590 |
| Bsp120I | GGGCCC | 1 cut(s) | 6189 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 3051, 5448 |
| Bsp19I | CCATGG | 1 cut(s) | 648 |
| BspACI | CCGC | 8 cut(s) | 1818, 2202, 3112, 3139, 4061, 4485, 4710, 5430 |
| BspANI | GGCC | 9 cut(s) | 1569, 2594, 4361, 4484, 4894, 5698, 6037, 6114, 6191 |
| BspDI | ATCGAT | 1 cut(s) | 6286 |
| BspHI | TCATGA | 4 cut(s) | 2925, 4603, 4819, 5206 |
| BspMAI | CTGCAG | 9 cut(s) | 1078, 3163, 4219, 4723, 4873, 4944, 5740, 5751, 5811 |
| BspMI | ACCTGC | 2 cut(s) | 5860, 6371 |
| BspOI | GCTAGC | 1 cut(s) | 5745 |
| BspPI | GGATC | 8 cut(s) | 90, 103, 787, 1196, 3653, 5141, 5415, 6332 |
| BspQI | GCTCTTC | 3 cut(s) | 2686, 3417, 3918 |
| BspT104I | TTCGAA | 1 cut(s) | 1590 |
| BspT107I | GGYRCC | 6 cut(s) | 528, 4472, 5482, 5761, 5957, 6056 |
| BspTI | CTTAAG | 2 cut(s) | 136, 5411 |
| BspTNI | GGTCTC | 3 cut(s) | 4034, 4899, 5935 |
| BsrDI | GCAATG | 6 cut(s) | 1614, 1842, 2185, 5288, 5609, 6345 |
| BssECI | CCNNGG | 8 cut(s) | 470, 523, 648, 4386, 5109, 5110, 5487, 5986 |
| BssNI | GRCGYC | 2 cut(s) | 529, 665 |
| BssSI | CACGAG | 3 cut(s) | 501, 1890, 3619 |
| BssT1I | CCWWGG | 4 cut(s) | 523, 648, 4386, 5986 |
| Bst2BI | CACGAG | 3 cut(s) | 501, 1890, 3619 |
| Bst2UI | CCWGG | 8 cut(s) | 471, 1354, 2255, 2607, 4134, 5111, 5489, 5630 |
| Bst6I | CTCTTC | 9 cut(s) | 398, 597, 2686, 2816, 3078, 3417, 3918, 4602, 5250 |
| BstACI | GRCGYC | 2 cut(s) | 529, 665 |
| BstAFI | CTTAAG | 2 cut(s) | 136, 5411 |
| BstAPI | GCANNNNNTGC | 6 cut(s) | 3650, 3734, 4160, 4718, 5423, 6356 |
| BstBAI | YACGTR | 2 cut(s) | 3047, 6005 |
| BstBI | TTCGAA | 1 cut(s) | 1590 |
| BstDSI | CCRYGG | 1 cut(s) | 648 |
| BstH2I | RGCGCY | 1 cut(s) | 532 |
| BstHHI | GCGC | 2 cut(s) | 19, 531 |
| BstMAI | GTCTC | 9 cut(s) | 70, 841, 1880, 4034, 4385, 4899, 5282, 5543, 5935 |
| BstNI | CCWGG | 8 cut(s) | 471, 1354, 2255, 2607, 4134, 5111, 5489, 5630 |
| BstNSI | RCATGY | 8 cut(s) | 885, 1119, 2782, 4767, 5102, 5430, 5471, 6200 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1300, 4404 |
| BstSCI | CCNGG | 9 cut(s) | 469, 1352, 2253, 2605, 3813, 4132, 5109, 5487, 5628 |
| BstSLI | GKGCMC | 6 cut(s) | 2155, 3655, 5496, 5824, 6010, 6193 |
| BstV2I | GAAGAC | 3 cut(s) | 138, 1788, 3845 |
| BstX2I | RGATCY | 7 cut(s) | 95, 779, 1078, 1201, 1462, 1493, 5407 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 6080 |
| BstYI | RGATCY | 7 cut(s) | 95, 779, 1078, 1201, 1462, 1493, 5407 |
| Bsu15I | ATCGAT | 1 cut(s) | 6286 |
| BsuI | GTATCC | 2 cut(s) | 118, 4798 |
| BsuRI | GGCC | 9 cut(s) | 1569, 2594, 4361, 4484, 4894, 5698, 6037, 6114, 6191 |
| BsuTUI | ATCGAT | 1 cut(s) | 6286 |
| BtgI | CCRYGG | 1 cut(s) | 648 |
| BtsI | GCAGTG | 4 cut(s) | 736, 4161, 4716, 4937 |
| BveI | ACCTGC | 2 cut(s) | 5860, 6371 |
| CaiI | CAGNNNCTG | 5 cut(s) | 735, 1271, 1340, 4430, 5662 |
| CciI | TCATGA | 4 cut(s) | 2925, 4603, 4819, 5206 |
| CfoI | GCGC | 2 cut(s) | 19, 531 |
| Cfr13I | GGNCC | 6 cut(s) | 300, 467, 3953, 6113, 6189, 6190 |
| ClaI | ATCGAT | 1 cut(s) | 6286 |
| CseI | GACGC | 4 cut(s) | 673, 1754, 4065, 5213 |
| CsiI | ACCWGGT | 1 cut(s) | 4132 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 4014, 4049 |
| DinI | GGCGCC | 1 cut(s) | 530 |
| DraIII | CACNNNGTG | 1 cut(s) | 3439 |
| EaeI | YGGCCR | 4 cut(s) | 2592, 4359, 4482, 4892 |
| Eam1104I | CTCTTC | 9 cut(s) | 398, 597, 2686, 2816, 3078, 3417, 3918, 4602, 5250 |
| EarI | CTCTTC | 9 cut(s) | 398, 597, 2686, 2816, 3078, 3417, 3918, 4602, 5250 |
| Eco130I | CCWWGG | 4 cut(s) | 523, 648, 4386, 5986 |
| Eco147I | AGGCCT | 3 cut(s) | 1569, 5698, 6037 |
| Eco24I | GRGCYC | 3 cut(s) | 188, 3930, 6193 |
| Eco31I | GGTCTC | 3 cut(s) | 4034, 4899, 5935 |
| Eco32I | GATATC | 4 cut(s) | 1386, 1992, 2853, 2982 |
| Eco47I | GGWCC | 3 cut(s) | 300, 467, 3953 |
| Eco72I | CACGTG | 1 cut(s) | 3047 |
| Eco88I | CYCGRG | 4 cut(s) | 283, 1307, 3461, 4637 |
| EcoO109I | RGGNCCY | 2 cut(s) | 467, 6189 |
| EcoRI | GAATTC | 2 cut(s) | 4434, 5134 |
| EcoRII | CCWGG | 8 cut(s) | 469, 1352, 2253, 2605, 4132, 5109, 5487, 5628 |
| EcoRV | GATATC | 4 cut(s) | 1386, 1992, 2853, 2982 |
| EcoT14I | CCWWGG | 4 cut(s) | 523, 648, 4386, 5986 |
| EcoT22I | ATGCAT | 1 cut(s) | 5405 |
| EcoT38I | GRGCYC | 3 cut(s) | 188, 3930, 6193 |
| EgeI | GGCGCC | 1 cut(s) | 530 |
| EheI | GGCGCC | 1 cut(s) | 530 |
| ErhI | CCWWGG | 4 cut(s) | 523, 648, 4386, 5986 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 130, 162, 516, 548 |
| FaqI | GGGAC | 5 cut(s) | 2251, 2458, 3797, 5128, 6055 |
| FauI | CCCGC | 2 cut(s) | 1825, 2209 |
| FauNDI | CATATG | 2 cut(s) | 2391, 6141 |
| FbaI | TGATCA | 3 cut(s) | 1513, 4600, 4816 |
| FblI | GTMKAC | 1 cut(s) | 912 |
| FriOI | GRGCYC | 3 cut(s) | 188, 3930, 6193 |
| GlaI | GCGC | 2 cut(s) | 18, 530 |
| GsaI | CCCAGC | 5 cut(s) | 5775, 5805, 5835, 6014, 6076 |
| GsuI | CTGGAG | 4 cut(s) | 225, 813, 2358, 2643 |
| HaeII | RGCGCY | 1 cut(s) | 532 |
| HaeIII | GGCC | 9 cut(s) | 1569, 2594, 4361, 4484, 4894, 5698, 6037, 6114, 6191 |
| HapII | CCGG | 3 cut(s) | 992, 3815, 3849 |
| HgaI | GACGC | 4 cut(s) | 673, 1754, 4065, 5213 |
| HhaI | GCGC | 2 cut(s) | 19, 531 |
| Hin1I | GRCGYC | 2 cut(s) | 529, 665 |
| Hin6I | GCGC | 2 cut(s) | 17, 529 |
| HinP1I | GCGC | 2 cut(s) | 17, 529 |
| HincII | GTYRAC | 9 cut(s) | 279, 675, 858, 2132, 3025, 4273, 4769, 5724, 6090 |
| HindII | GTYRAC | 9 cut(s) | 279, 675, 858, 2132, 3025, 4273, 4769, 5724, 6090 |
| HindIII | AAGCTT | 3 cut(s) | 358, 1640, 4923 |
| HpaII | CCGG | 3 cut(s) | 992, 3815, 3849 |
| Hpy99I | CGWCG | 2 cut(s) | 124, 5280 |
| HpyCH4IV | ACGT | 8 cut(s) | 119, 568, 3046, 3732, 4675, 6004, 6214, 6396 |
| HpySE526I | ACGT | 8 cut(s) | 119, 568, 3046, 3732, 4675, 6004, 6214, 6396 |
| Hsp92I | GRCGYC | 2 cut(s) | 529, 665 |
| HspAI | GCGC | 2 cut(s) | 17, 529 |
| KasI | GGCGCC | 1 cut(s) | 528 |
| KpnI | GGTACC | 2 cut(s) | 4476, 5961 |
| Ksp22I | TGATCA | 3 cut(s) | 1513, 4600, 4816 |
| LguI | GCTCTTC | 3 cut(s) | 2686, 3417, 3918 |
| MabI | ACCWGGT | 1 cut(s) | 4132 |
| MaeII | ACGT | 8 cut(s) | 119, 568, 3046, 3732, 4675, 6004, 6214, 6396 |
| MfeI | CAATTG | 5 cut(s) | 69, 1578, 3070, 4659, 4850 |
| MflI | RGATCY | 7 cut(s) | 95, 779, 1078, 1201, 1462, 1493, 5407 |
| MlsI | TGGCCA | 1 cut(s) | 4361 |
| MluNI | TGGCCA | 1 cut(s) | 4361 |
| Mly113I | GGCGCC | 1 cut(s) | 529 |
| MmeI | TCCRAC | 6 cut(s) | 17, 102, 1450, 1593, 2972, 6049 |
| Mox20I | TGGCCA | 1 cut(s) | 4361 |
| Mph1103I | ATGCAT | 1 cut(s) | 5405 |
| MroXI | GAANNNNTTC | 7 cut(s) | 700, 1569, 2088, 2180, 2910, 3233, 3364 |
| MscI | TGGCCA | 1 cut(s) | 4361 |
| MslI | CAYNNNNRTG | 5 cut(s) | 179, 1052, 2394, 2505, 4071 |
| Msp20I | TGGCCA | 1 cut(s) | 4361 |
| MspA1I | CMGCKG | 6 cut(s) | 3475, 4310, 4427, 4841, 4874, 5662 |
| MspCI | CTTAAG | 2 cut(s) | 136, 5411 |
| MspI | CCGG | 3 cut(s) | 992, 3815, 3849 |
| MspR9I | CCNGG | 9 cut(s) | 471, 1354, 2255, 2607, 3815, 4134, 5111, 5489, 5630 |
| MunI | CAATTG | 5 cut(s) | 69, 1578, 3070, 4659, 4850 |
| Mva1269I | GAATGC | 3 cut(s) | 1219, 1318, 4840 |
| MvaI | CCWGG | 8 cut(s) | 471, 1354, 2255, 2607, 4134, 5111, 5489, 5630 |
| NarI | GGCGCC | 1 cut(s) | 529 |
| NciI | CCSGG | 1 cut(s) | 3815 |
| NcoI | CCATGG | 1 cut(s) | 648 |
| NdeI | CATATG | 2 cut(s) | 2391, 6141 |
| NheI | GCTAGC | 1 cut(s) | 5741 |
| NmuCI | GTSAC | 6 cut(s) | 731, 1302, 1949, 2774, 3616, 3841 |
| NsiI | ATGCAT | 1 cut(s) | 5405 |
| NspI | RCATGY | 8 cut(s) | 885, 1119, 2782, 4767, 5102, 5430, 5471, 6200 |
| NspV | TTCGAA | 1 cut(s) | 1590 |
| OliI | CACNNNNGTG | 1 cut(s) | 179 |
| PaeI | GCATGC | 1 cut(s) | 5430 |
| PaeR7I | CTCGAG | 1 cut(s) | 3461 |
| PagI | TCATGA | 4 cut(s) | 2925, 4603, 4819, 5206 |
| PaqCI | CACCTGC | 1 cut(s) | 6371 |
| PasI | CCCWGGG | 1 cut(s) | 5110 |
| PceI | AGGCCT | 3 cut(s) | 1569, 5698, 6037 |
| PciI | ACATGT | 4 cut(s) | 881, 2778, 4763, 6196 |
| PciSI | GCTCTTC | 3 cut(s) | 2686, 3417, 3918 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1897 |
| PctI | GAATGC | 3 cut(s) | 1219, 1318, 4840 |
| PdmI | GAANNNNTTC | 7 cut(s) | 700, 1569, 2088, 2180, 2910, 3233, 3364 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 3194, 4357, 5662 |
| PfoI | TCCNGGA | 2 cut(s) | 2253, 3813 |
| PluTI | GGCGCC | 1 cut(s) | 532 |
| PmaCI | CACGTG | 1 cut(s) | 3047 |
| PmlI | CACGTG | 1 cut(s) | 3047 |
| Ppu21I | YACGTR | 2 cut(s) | 3047, 6005 |
| PpuMI | RGGWCCY | 1 cut(s) | 467 |
| PscI | ACATGT | 4 cut(s) | 881, 2778, 4763, 6196 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1300, 4404 |
| PshBI | ATTAAT | 1 cut(s) | 609 |
| PsiI | TTATAA | 1 cut(s) | 588 |
| Psp1406I | AACGTT | 2 cut(s) | 568, 3732 |
| Psp5II | RGGWCCY | 1 cut(s) | 467 |
| Psp6I | CCWGG | 8 cut(s) | 469, 1352, 2253, 2605, 4132, 5109, 5487, 5628 |
| PspCI | CACGTG | 1 cut(s) | 3047 |
| PspFI | CCCAGC | 5 cut(s) | 5771, 5801, 5831, 6010, 6072 |
| PspGI | CCWGG | 8 cut(s) | 469, 1352, 2253, 2605, 4132, 5109, 5487, 5628 |
| PspOMI | GGGCCC | 1 cut(s) | 6189 |
| PspPI | GGNCC | 6 cut(s) | 300, 467, 3953, 6113, 6189, 6190 |
| PspPPI | RGGWCCY | 1 cut(s) | 467 |
| PstI | CTGCAG | 9 cut(s) | 1078, 3163, 4219, 4723, 4873, 4944, 5740, 5751, 5811 |
| PstNI | CAGNNNCTG | 5 cut(s) | 735, 1271, 1340, 4430, 5662 |
| PsuI | RGATCY | 7 cut(s) | 95, 779, 1078, 1201, 1462, 1493, 5407 |
| PvuII | CAGCTG | 6 cut(s) | 3475, 4310, 4427, 4841, 4874, 5662 |
| RseI | CAYNNNNRTG | 5 cut(s) | 179, 1052, 2394, 2505, 4071 |
| SapI | GCTCTTC | 3 cut(s) | 2686, 3417, 3918 |
| Sau96I | GGNCC | 6 cut(s) | 300, 467, 3953, 6113, 6189, 6190 |
| ScaI | AGTACT | 3 cut(s) | 196, 1367, 3688 |
| ScrFI | CCNGG | 9 cut(s) | 471, 1354, 2255, 2607, 3815, 4134, 5111, 5489, 5630 |
| SexAI | ACCWGGT | 1 cut(s) | 4132 |
| SfoI | GGCGCC | 1 cut(s) | 530 |
| Sfr274I | CTCGAG | 1 cut(s) | 3461 |
| SfuI | TTCGAA | 1 cut(s) | 1590 |
| SinI | GGWCC | 3 cut(s) | 300, 467, 3953 |
| SlaI | CTCGAG | 1 cut(s) | 3461 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 179, 1052, 2394, 2505, 4071 |
| SmlI | CTYRAG | 5 cut(s) | 136, 215, 3461, 4862, 5411 |
| SmoI | CTYRAG | 5 cut(s) | 136, 215, 3461, 4862, 5411 |
| SpeI | ACTAGT | 1 cut(s) | 4771 |
| SphI | GCATGC | 1 cut(s) | 5430 |
| SseBI | AGGCCT | 3 cut(s) | 1569, 5698, 6037 |
| SsiI | CCGC | 8 cut(s) | 1818, 2202, 3112, 3139, 4061, 4485, 4710, 5430 |
| SspDI | GGCGCC | 1 cut(s) | 528 |
| SspI | AATATT | 2 cut(s) | 2113, 2459 |
| StuI | AGGCCT | 3 cut(s) | 1569, 5698, 6037 |
| StyD4I | CCNGG | 9 cut(s) | 469, 1352, 2253, 2605, 3813, 4132, 5109, 5487, 5628 |
| StyI | CCWWGG | 4 cut(s) | 523, 648, 4386, 5986 |
| TaiI | ACGT | 8 cut(s) | 122, 571, 3049, 3735, 4678, 6007, 6217, 6399 |
| TaqII | GACCGA | 1 cut(s) | 3649 |
| TatI | WGTACW | 7 cut(s) | 194, 1019, 1365, 2735, 3686, 4723, 4846 |
| TauI | GCSGC | 2 cut(s) | 4487, 4712 |
| TseFI | GTSAC | 6 cut(s) | 731, 1302, 1949, 2774, 3616, 3841 |
| Tsp45I | GTSAC | 6 cut(s) | 731, 1302, 1949, 2774, 3616, 3841 |
| TspGWI | ACGGA | 3 cut(s) | 1273, 2575, 6037 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 3194, 4357, 5662 |
| Vha464I | CTTAAG | 2 cut(s) | 136, 5411 |
| VneI | GTGCAC | 4 cut(s) | 2151, 3651, 5492, 5820 |
| VpaK11BI | GGWCC | 3 cut(s) | 300, 467, 3953 |
| VspI | ATTAAT | 1 cut(s) | 609 |
| XbaI | TCTAGA | 2 cut(s) | 149, 1198 |
| XceI | RCATGY | 8 cut(s) | 885, 1119, 2782, 4767, 5102, 5430, 5471, 6200 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2415 |
| XhoI | CTCGAG | 1 cut(s) | 3461 |
| XmiI | GTMKAC | 1 cut(s) | 912 |
| XmnI | GAANNNNTTC | 7 cut(s) | 700, 1569, 2088, 2180, 2910, 3233, 3364 |
| ZrmI | AGTACT | 3 cut(s) | 196, 1367, 3688 |
| Zsp2I | ATGCAT | 1 cut(s) | 5405 |