Prupe.6G104600_v2.0.a1

helicase protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
7363587 .. 7383319
19733 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G104600.3

Sequence Viewer

Length: 7734 bp
ATGGCACATGATACACGATCTAGTCGGAAAATCAAGGATGATGAGAATAACAATTCAAACGGGAGGCAAATTAGTAGTAAAGGATTAAGTACTTCAGGTTCTGGAGCATCAGATACATCTGGCTTAAGGAGGTCTTCCAGAGAAACATCATTGAAGAAAAACATAACTCTGAGCCCTTCTAGTACTAGGAAGTCTGAAAGACTTGAGAAAAAAATGCCTGAAACTCCTCTATTCAAGAGGAAATCTGAGAGATTTGAGAAGAAGTTGACTCCAAGTCCTTTGAGGAGATCGGATAGAGCCAAGAATCACTCATCAACTTCTTCTGGGTCTAAAAGATCTGATAAAAGCTCAGGTTCATCATTGGCAAAGCGGAAATCGGAAAAGAAAGAGAAGAGTGTGAAAGAATTGACATTGGGTACTAGAGAAGTTAGCAAAAGTGAGAAACAGAATGTAGGACCTTGTCATGGAAAAAATAAGATAAGAAATGCTCGAGCTTATAAGAAACTCTTCACAAAACATAGAAAGAAGCTTCAAGCACGAGATCATAGCGAGAAGCAGAGCAGGCAGAATAAAGTCTCTCAGGGAGGTAGCAATGCTTGTGGAAGTGAGATTGAGGGGCTTGGTAAAGGCGTTGAGGAACTGAATGAAGAATTTGTTGGGAGAGTTCATGATGGATCTTTGGTGGGATCTGATTCCAGTGTAAATAAATTAACAAAAGAAACATGGGAAGATAATCCCAGAGTGGATTTGTCCCATTCAAGCCCTAGGCCTAGCTGCTTGGAGGAAGCTTCTGAGTTCAAAGATGGTGATGGCTTAGAAATTCGTGATCAACGCCCACTGTCATCATCTTATAATGCCATGACGGAAGAGCTCAATGATGCACCTAAAAGGGTACATGTAGAATGCTCTGCAATGGAAAAGTTGAAGATGCCAGAGTTGACATGTTCTACATTCAATGAAAGGTTACATGATGTCTACATTGCCTCAGAAATTGGTCACAGGGTCATACCTTCAAAGAGGAAAAGGAACGTGGCAGACGGGGATTCTGATTCTCCAGTTAATGCAAGTAAAGATGTCTGCACCTTGACTGCTGATGCTGTCTCTTCGTTGCCATCTGGGTCCACAGAAGATGTTTCTGTTGAGACGTGTGGTGCATGTTTTAAGCGACAAAGGGTAGAAAATGATCCGATGAATCTGGAGTTTTGCTCTTGCAGCACAAAATTAAATCAGGAGTTATGTGGTGCCTCTGTAACTGAGTTGCATCCGGATAGAGGAGAACTCATAGCTGATAGTACCATGGAAGTTCCTGAAAACCTTAACACTTGTACGCATCAAAAGGAGTTTTCTGCAGATCTTCAAACAAATGGCAACCAAAATACATGCCTCATCTGTTCTCTTGGTGGGAAGCTCCTATTCTGTGATGGAAGAGGATGCAAGAGAAGTTACCACCTTTCTTGTCTAGATCCTCCTATGGATGCTGTTCCTCTTGGAGTTTGGCACTGTTCCATGTGTGTTAGGAAAAAGATAGAATCTGGTATATATTCGATGTCAGAGGGAATTGAGTCAATCTGGGATGCTAGAGAGGTGGAGGTATCTGATGTTGATGGATTGTTAAAGAGGAAGGAGTTTTTTGTTAAATACAAAGGTCTTGCTCATATTCACAATCAATGGGTACCAGAAAGTAAAGTGCTTCTTGAAGCTCCTACCCTTGTGGTAAAATTCAACCGAAATAACCAGGTGACAAGGTGGAAGAAAAAATGGACTGTTCCACGTCGCTTGCTACAAAAAAGATTGTTAATGTCTCCCAAGCAGCGTGACAACTATCTTAGGGAGCATACTGGTGATAAGTTATTTTGCCATTATGAATGGCTTGTGAAATGGCATGGTCTTGATTATGATGATGCTACTTGGGAGTTAGAGAATGCTGCATTCTTGAATTCACCTGAGGGTCAGGGCCTTATAAGCGTTTATGAAAACCGTCGTCAGAGGGCAAAGAAGGCTTCTATTTCCCCTGAAACGGATAAGATACTTGAGGGTAAAAAATGTTCATCAGTTAAATTATTCCAACTGCCAGCTGGAGAAATATCTGGATTTGATAATACTTGTCTAGACAACATTAACAAGCTACGCGAGCTCTGGCATAAGGGTGAGAATGCTGTTGTTTATGATCAGGAACGAATTGCGAAGGTGGTTGCATTTATTCTATCTTTGCAGTCTGATTTCCATCGACCTTTTCTCATCATCTCAACTCCTCCTACACTTTGTTGTTGGGATAATGAGTTCTTCCATTTGGCACCATCTATCGATGTTGTGGTTTACAGTGGAAATAAAGATTTACGGAGAAGTATTAGGACAATAGAGTTTGATGGGGTTGGTGGTTATATGATGTTTCAAGTACTTGTTACCTCACCAGAGGCTATTATTGAGGATAAAAATGTGTTCGAGTGCATACAATGGGAAACTATCATAATTGATGAGTGCCAGCGCCCTACAATCTCTAAACAGCTGGTGCAGATTAAGATGCTACATACTCATAATTGGCTTCTCCTGGTCAATGGAATATCTAAGGAGAGTAGTGCTGCTGAGTACCTTAGTTTGCTGTCTGTCCTTGACTCTCATGGCGATTCACAAAACAGTGATCATTTGCTAACCAGTTCTGGTGATATTATTGGTAAACTAAAGGAGAGGTTCTCAAGGTATATTGCATATGGAGATATTATTGGTAAACCCAAACCTGACTCTTCCAGGTTTATTGAGTACTGGGTTCCTGTACGTATATCAACTGTCCAGCTAGAGCAATATTGCGAAAATCTACTGTCGAACTCCACGTTGATTCTCTCATCAGCAAAAAAAGATCGTGTTGGAGCACTCCATGATATAGTTCTATCTGCCCGGAAGTGCTGTGATCATCCCTACATTGTGCATCCACCCTTGCAAACCTTGCTTACTAAAGACCTTCAAGCAGTTGAGTATTTGGATGTAGGAGTCAAAGCAAGTGGCAAGCTTCGGCTTCTTGACATGATGCTTAAAGAGATAAAGAATCGAAGTTTAAGAGTACTCATCCTTTTCCAGTCAATCAGTGGTTCAGGAAGTGCTTATTCTCTTGGAGATATTTTGGATGATTTCCTGCGTCAAAGGTATGGTGAAAATTCCTATGAACGCGTTGAGTTTGGTGTTCTCCGTTCTAAGAAAGATGTTGCCATGAACATGTTCAACAATAAGGAGAATGGTAGATTTGTGTTCTTATTGGAGGCTCATGCCTGTCTTCCCAGCATCAAACTGTCATCAGTTGATACTGTAATCATATTTGGTAGTGACCGGAATCCACATAATGATATAAGAGCCCTGCAAAAAATATCACTTGATTCACAATTTGAGGAAATAAAAGTATTTCGTCTATATTCAACGTGTACCGTGGAGGAGAAACTTCTAGTTCGTGCAAAGCAGAGGAAGATTCATGATAGCAATGTACAGAATATAAGCAGTAGTATGCTTCTGTGGGGGGCACCTTACCAATTTGATAAATTAGATGAGTTCCACTGCTGCAACACCCCAGCCTCCACTGCAAATATCTTGCCTGAGGAATCACTTCTGAATGATGTCATCCGGGAGTTCTTGTCCATACTTCCTCAGGATGGCAACAACAATGTCTTATGCGATTTCTCTATCATTTCAAAAGTTCAACAAACTGGAGGAGCTTACAGTGCAGAGGTTCCATTGCTTAATGAGCTGAAAAATCAACATACTGGTGAAGGGCAGCCCCTTGATTTTTGGACAAAACTGTTGGTAGGAAAGCATCCTCCGTGGAAATATTGTTCTGGTTTGTCTCAGAGGAACCGGAAACGGGCACAACATCTTGATGAGTTATCAAAGAAACCAGAAGGTGGTAGTGATGAAGTTGTAAAAAAGCGCAAGAAGGTGGTAAATGGTAATGATGATGCACCCTATCCGAAGCCTGGATCAGAGGGGAAATCAGTTCCTGGATGCAAGGAAGTATCGTCTGTGGATATAAATGTCTTAGAAAATCCAGAAAGTAGCATGTTTGAGTCTGAGGAGAGAAGAAAATTACGTGATGCCCAGAAGAGTCTTCATCAACTTTTGAAGCCAGAGATATTAAAACTATGTGGAATCCTACAAGTCTCTGATGCTGTCAAGGTCATGGTCGAAAAGTTTCTTCAATATGTAATGAGTAATCACCATGTTAATAGAGAACCAGCGACAATACTGCAGGCATTTCAGATATCTCTGTGCTGGACTGCAGCTTCATTTCTGAAGCAGAAAGTCGACCACAAAGAATCTATTCAACTTGCAAAGAAGCATCTTAACTTCAATTGCAAAAAGGAAGAGGCTGACTATGTTTATTCAATGCTGCGGTGCCTGAAAAAAACATTTTTATACCGTACAGGGATTTTTAAGGCTGCAGAATCTCCAAAGTCAGCTAAATTATCAACTAAAGATGTTTTGAAGAATTCACATCCAAAGGTTTCACGGTCAACAACTTCTAACTTTCAGCAGGTCAAATCAGATGTTAAAGACTTGTCACTGAAGCAAGAAAAATTAGCACAAAAAGATGTCTCAAAAAGTATTAAAGATATTCAGAAAAAGATCCAGAAGCAATTGACAAAACTTATTGAGAAGCAAATCAAAGAGAGAAGTGAAGTTTTGAGAACTTGCCAGGAAGAAAAGGCGCATCTAGAAGCAGAATCAGTTGTTATTCGGTCTTGTTTCCTAAATAATACATCAATGAGAACAGAAAAGCTAAAGATGTTGGAAAAAAAAATTGAAGAAAATAAAAACCAGACCAACCTACGTCTTAAGCGTCTTGAGGCATCGCAGCAGGAAGCACAGGATAAGTTGAAGGAGATGGGGAAACGATGGGCAGAGGAAGTGCAATCCTGGGCTTGTGTTGAATTGTTAAATAGATCACCTTCAAATACACCTGAGCCTTGGTTGGAATGCTCAAGGACTAGTGAAGGTTGCAAAGATTTTGCCACTTTAAGAGATCATGATATTGATTGTGTTGTGCATAGTATGACAGGTAGAGTGACAGCACTGTCTCAAACTCCAGATAGTGGTCCAGATGAAGCTGAAACATGTAGTGGTCCCATTAGAACAGAGATGACCACAGCTAGGCCACTTGGTGCAAATGGTGCATTAAATAGAACTTCTGGTGATGATCAAGAGAACACTGCGTCTGTGAATCCTTGTCCGAAAGCTGGAATTACTGATTGTGCCAATGGGGATTTTCTGCGTGAAGTTCAAGAAGTTGCCTGCTCTGATTCACAGAAAGTTGTCACCTCCAGTCTTCCTTTGTTTGAAGAATGGAACCACAATGCTGACACATTACCCATTTCTGATGGGGAGGTCAGAGTGGAAGTTCCCGAAACTCTCTGTTCAACTGATGGTCAACACGGTTCCCACCCCTTGAATCTGTCTTCTTTGCAACAGAATCCTGATGGGGCTACATTAAGAGTGCCTGACAGAGAGGCTCTAGTGGGATTGCATGAGACTGTCAGTTCACTTCGTGGTTTGCAAAATGTTGTTTCTGTTAGGGCACCTTCATCTGAACAAATCCATGTAGTGAAGGGAGCTATGCCAGATAAAGAGGTCGAATTAGGAGTGCTTGAGACTGTCAGTTCCAGTCATGATTTGCATAACGTTGTCTCTGTGAGTACACCTTCATCAGAAGAAGAAATCCATGTAGTGAAGGAAACCACACCAGATAAAGAGGTCGAACTGGGAGTGCTTGAGACTGTCAGTTCGAATGATGGCATAGCAAATCTTGTTACTGTGCATCCACCTTCATCTGGAGAAGATATCCATGAAAATTCCACAGAACATGAGACTGTCAGTTCAAGTCATGGTTTCCAAAATGTTGTGCCTGTGTGCGTACCTTCATCTGAAGAGCAAGTCCATGTAGTGACAGTAACCTTGCCAGATAATGAGGTTGATTTGGCAGTGCTGCAGACTGTTTGTTCAGATGATGGACCGGGGAATCTTGCCTCTGTGAATCCACCTTCATCTGATGAGAAAATCTCTGAAAAAGCCACTGAAAAAGAGAACAGTGAAGGGTGTATTATGGCATCTGACAGTGCAACAGGGGTCTACCAGCAGAATGGAGTTGATACTGCAGTCAATGGAAGCTCGTATCAAGAAATGCCCCTGGTAAATTCACCTGGATTGCAGCCTGTGGCCCTGGCTCCTGGTGGTTCAGTGACACAAGAACAGGCACAACAAGACAAAGGTACTCTGTTAGAAACATCAACTGCAGTACAAGAAAGAGATGCAGAAGCCAGGGAAAAGCAGAATACTTGCCAACCAATTGAAAATCTCGCACCCGAATCTGTTCCGGTAGTTTCATCCAATCTGTCTAATCATGAAATGCCAGACATTGAGCCTGTAGTACAACAGCTGCTGTTACCATCCTCTAATACACCTGATCATAGTGCTCCTGAGTTATCTTCAGCTGGTGGAGTTGAAATTCAGCCAAGTCCTGAAAACCGGACCTTTAACCAAGTTGCTCATGCTCCAATGCCACTTGTTGAAAACCTTCTTGATCTTTCAAATCACACCGTTTCTCGGTCTGTGGCATGGTCTACTAGCGGATTTGGACTGCCGTTTTCAGACACAAGAGCTACACCTGTTACTTCTGCACTTAATAGTCGTCCTATAAATGCTGCACCACAGGGAGCATCTCGAACGCCCCTGCCTGTATACCATGACCCGCTTCAAAATGAATTGGAAAGATTAAATAAACAAACAGATCATATCGTTAAGTCTCATGAAGATACGAAGCTGCGCCTGAAAACTGATTGCGACAAGGAGATAGAGGAGGCTCTTGCTGAAATTCGTCGAAAGTATGAGATAAGATTTCAGGAGATTGAGGCGGAATTTCTCCTTAAAAAGAAGGAATTGGATTCAATTCACAACAAAGTTTTGATGAATAAGATTTTGGCCGAGGCTTTCAGGTCTAAATGCATGGATCTTAGGGCATCAGGTGCATCTGGAGCACAGCAAGGTCCTCTTATTTCCCTGGCAGATGGGATTTCCAGTTTCTCCCAGCAGCTGGTCCATCTATCTATGCAAGATGCACAAAGATATTCTCCCATTACCAGTTCATCTTTGGCCGGCCCTCCTGCAGTTGGCCTGCAGACTTCTATTGCACCATTACCCAGCCCGCAGACGACCGCTCCTGCATCTTTATCCAATCCAAATTGTACAGCTCCACCTATGCAGACTGTTCCTCTTGCACCTGCTCTTTTGCCGAGCATTCCAACAAGACCCCCCCACATCAGTTCCATCTCTTCCCCAGGAATCCCCCAAGGTGCAGGTGAGATTCGTGCTCCAGCCCCACATCTTCAACCTTTTAGACCTTCAACATCCATGTCAAACCAGCAGTTGCATAGCAACCTCCTTGCAACATCTCCTTCTTTTACTCATATTCCACGACTACCATCCCCCACACAGCAATCTGTTCCTCATAATAGGGCCCACCATCCTGAAAGTGCGGGAGGAGATTTGGCAGCTCTTCGTAGTTTATCTGCATTGGGGTTGCTTATGAATATGAACAGTCGGGCTGGTGCAAATCCACCAGGTAGTTTGCCCTCACAACCAAATTTGGTCTCAAACCACCAGTCGAGCCTTTCTGAACCCCCCAATACGAGTGGTGCGTGTGTAAACCCAGTACATACAAGTGGATCCACTGACATAGTTTGTTTATCGGATGATGACTAA

Protein Analysis

2578

Amino Acids

285.17

Weight (kDa)

6.36

Isoelectric Point (pI)

52.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 498, 852, 1961
AarI CACCTGC 2 cut(s) 7261, 7319
AasI GACNNNNNNGTC 1 cut(s) 5053
Acc36I ACCTGC 3 cut(s) 4504, 7261, 7319
Acc65I GGTACC 1 cut(s) 1672
AccB1I GGYRCC 6 cut(s) 1241, 1672, 2293, 3505, 4374, 5554
AccB7I CCANNNNNTGG 3 cut(s) 3884, 5072, 7066
AccBSI CCGCTC 1 cut(s) 7190
AccI GTMKAC 5 cut(s) 975, 4284, 6105, 6596, 6714
AccII CGCG 2 cut(s) 2130, 3162
AccIII TCCGGA 1 cut(s) 1264
AciI CCGC 8 cut(s) 370, 4372, 6603, 6725, 6887, 7178, 7188, 7508
AclI AACGTT 1 cut(s) 5658
AclWI GGATC 9 cut(s) 682, 694, 1178, 1457, 3967, 4600, 6990, 7692, 7705
AcoI YGGCCR 2 cut(s) 6954, 7125
AcuI CTGAAG 5 cut(s) 78, 4292, 4565, 5922, 6447
AdeI CACNNNGTG 2 cut(s) 5141, 5525
AflII CTTAAG 2 cut(s) 124, 4814
AflIII ACRYGT 7 cut(s) 895, 941, 1145, 3160, 3207, 3407, 5093
AhdI GACNNNNNGTC 1 cut(s) 273
AhlI ACTAGT 1 cut(s) 4967
AjiI CACGTC 2 cut(s) 1146, 1772
AjuI GAANNNNNNNTTGG 4 cut(s) 639, 671, 6935, 6967
AloI GAACNNNNNNTCC 4 cut(s) 2264, 2296, 3799, 3831
Alw21I GWGCWC 6 cut(s) 873, 2136, 2869, 6451, 7012, 7345
AlwI GGATC 9 cut(s) 682, 694, 1178, 1457, 3967, 4600, 6990, 7692, 7705
AlwNI CAGNNNCTG 4 cut(s) 101, 3980, 6415, 7066
Ama87I CYCGRG 1 cut(s) 489
Aor13HI TCCGGA 1 cut(s) 1264
AoxI GGCC 9 cut(s) 767, 1954, 5132, 6192, 6954, 7125, 7129, 7144, 7488
ApaI GGGCCC 1 cut(s) 7492
ArsI GACNNNNNNTTYG 4 cut(s) 5743, 5775, 7619, 7651
Asp700I GAANNNNTTC 7 cut(s) 506, 3209, 3588, 4170, 4299, 6345, 6549
Asp718I GGTACC 1 cut(s) 1672
AspA2I CCTAGG 1 cut(s) 764
AspLEI GCGC 4 cut(s) 2487, 3912, 4690, 6801
AsuC2I CCSGG 3 cut(s) 2893, 3608, 5991
AsuII TTCGAA 1 cut(s) 5762
AvaI CYCGRG 1 cut(s) 489
AvaII GGWCC 8 cut(s) 455, 1119, 5075, 5102, 5987, 6504, 7019, 7069
AvrII CCTAGG 1 cut(s) 764
AxyI CCTNAGG 3 cut(s) 1944, 3579, 3630
BaeGI GKGCMC 4 cut(s) 3508, 3850, 5557, 7492
BaeI ACNNNNGTAYC 2 cut(s) 6117, 6150
BamHI GGATCC 1 cut(s) 7697
BanI GGYRCC 6 cut(s) 1241, 1672, 2293, 3505, 4374, 5554
BanII GRGCYC 5 cut(s) 176, 873, 2136, 3346, 7492
BauI CACGAG 1 cut(s) 537
BbsI GAAGAC 5 cut(s) 126, 3257, 4079, 5297, 5427
Bbv12I GWGCWC 6 cut(s) 873, 2136, 2869, 6451, 7012, 7345
BceAI ACGGC 1 cut(s) 6601
BcgI CGANNNNNNTGC 2 cut(s) 4207, 4241
BclI TGATCA 6 cut(s) 826, 2167, 2638, 2905, 5176, 6439
BcnI CCSGG 3 cut(s) 2893, 3608, 5991
BcuI ACTAGT 1 cut(s) 4967
BfoI RGCGCY 1 cut(s) 2488
BfrI CTTAAG 2 cut(s) 124, 4814
BfuAI ACCTGC 3 cut(s) 4504, 7261, 7319
BglII AGATCT 2 cut(s) 335, 1351
BlnI CCTAGG 1 cut(s) 764
BmcAI AGTACT 5 cut(s) 91, 184, 2397, 2759, 3057
Bme18I GGWCC 8 cut(s) 455, 1119, 5075, 5102, 5987, 6504, 7019, 7069
BmeRI GACNNNNNGTC 1 cut(s) 273
BmeT110I CYCGRG 1 cut(s) 489
BmgBI CACGTC 2 cut(s) 1146, 1772
BmrI ACTGGG 3 cut(s) 2770, 5747, 7676
BmuI ACTGGG 3 cut(s) 2770, 5747, 7676
BpiI GAAGAC 5 cut(s) 126, 3257, 4079, 5297, 5427
BplI GAGNNNNNCTC 8 cut(s) 1190, 1222, 1263, 1295, 2675, 2707, 6020, 6052
Bpu10I CCTNAGC 2 cut(s) 349, 4941
Bpu14I TTCGAA 1 cut(s) 5762
BpuEI CTTGAG 7 cut(s) 224, 2051, 2677, 4844, 4945, 5645, 5768
BpuMI CCSGG 3 cut(s) 2893, 3608, 5991
Bsa29I ATCGAT 1 cut(s) 2304
BsaAI YACGTR 2 cut(s) 2774, 4070
BsaBI GATNNNNATC 1 cut(s) 2223
BsaI GGTCTC 1 cut(s) 7627
BsaWI WCCGGW 5 cut(s) 1264, 3318, 3837, 6349, 6501
BsaXI ACNNNNNCTCC 4 cut(s) 3602, 3632, 7174, 7204
Bse118I RCCGGY 1 cut(s) 7127
Bse21I CCTNAGG 3 cut(s) 1944, 3579, 3630
Bse3DI GCAATG 5 cut(s) 598, 918, 978, 3472, 3716
Bse8I GATNNNNATC 1 cut(s) 2223
BseAI TCCGGA 1 cut(s) 1264
BseCI ATCGAT 1 cut(s) 2304
BseJI GATNNNNATC 1 cut(s) 2223
BseMI GCAATG 5 cut(s) 598, 918, 978, 3472, 3716
BseRI GAGGAG 9 cut(s) 216, 298, 1287, 2241, 3434, 3708, 4067, 6845, 7527
BseSI GKGCMC 4 cut(s) 3508, 3850, 5557, 7492
BseYI CCCAGC 4 cut(s) 3269, 3553, 7059, 7172
BsgI GTGCAG 6 cut(s) 1063, 2531, 3726, 6636, 6663, 7347
Bsh1236I CGCG 2 cut(s) 2130, 3162
Bsh1285I CGRYCG 1 cut(s) 7188
BshFI GGCC 9 cut(s) 769, 1956, 5134, 6194, 6956, 7127, 7131, 7146, 7490
BshNI GGYRCC 6 cut(s) 1241, 1672, 2293, 3505, 4374, 5554
BshVI ATCGAT 1 cut(s) 2304
BsiEI CGRYCG 1 cut(s) 7188
BsiHKAI GWGCWC 6 cut(s) 873, 2136, 2869, 6451, 7012, 7345
BsiHKCI CYCGRG 1 cut(s) 489
BsiSI CCGG 9 cut(s) 1265, 2893, 3319, 3607, 3838, 5990, 6350, 6502, 7128
BslFI GGGAC 2 cut(s) 736, 5088
BsmBI CGTCTC 1 cut(s) 1136
BsmFI GGGAC 2 cut(s) 736, 5088
BsmI GAATGC 6 cut(s) 908, 1927, 1928, 2158, 4961, 7269
BsnI GGCC 9 cut(s) 769, 1956, 5134, 6194, 6956, 7127, 7131, 7146, 7490
Bso31I GGTCTC 1 cut(s) 7627
BsoBI CYCGRG 1 cut(s) 489
Bsp119I TTCGAA 1 cut(s) 5762
Bsp120I GGGCCC 1 cut(s) 7488
Bsp13I TCCGGA 1 cut(s) 1264
Bsp1407I TGTACA 2 cut(s) 3469, 7217
Bsp19I CCATGG 1 cut(s) 1296
BspACI CCGC 8 cut(s) 370, 4372, 6603, 6725, 6887, 7178, 7188, 7508
BspANI GGCC 9 cut(s) 769, 1956, 5134, 6194, 6956, 7127, 7131, 7146, 7490
BspDI ATCGAT 1 cut(s) 2304
BspEI TCCGGA 1 cut(s) 1264
BspFNI CGCG 2 cut(s) 2130, 3162
BspHI TCATGA 6 cut(s) 667, 3457, 5005, 5644, 6376, 6781
BspMAI CTGCAG 9 cut(s) 1351, 4230, 4261, 4423, 5967, 6133, 6271, 7141, 7152
BspMI ACCTGC 3 cut(s) 4504, 7261, 7319
BspPI GGATC 9 cut(s) 682, 694, 1178, 1457, 3967, 4600, 6990, 7692, 7705
BspQI GCTCTTC 3 cut(s) 861, 5898, 7533
BspT104I TTCGAA 1 cut(s) 5762
BspT107I GGYRCC 6 cut(s) 1241, 1672, 2293, 3505, 4374, 5554
BspTI CTTAAG 2 cut(s) 124, 4814
BspTNI GGTCTC 1 cut(s) 7627
BsrBI CCGCTC 1 cut(s) 7190
BsrDI GCAATG 5 cut(s) 598, 918, 978, 3472, 3716
BsrFI RCCGGY 1 cut(s) 7127
BsrGI TGTACA 2 cut(s) 3469, 7217
BssAI RCCGGY 1 cut(s) 7127
BssNAI GTATAC 1 cut(s) 6715
BssSI CACGAG 1 cut(s) 537
BssT1I CCWWGG 4 cut(s) 764, 1296, 4946, 7321
Bst1107I GTATAC 1 cut(s) 6715
Bst2BI CACGAG 1 cut(s) 537
BstAFI CTTAAG 2 cut(s) 124, 4814
BstAPI GCANNNNNTGC 3 cut(s) 2941, 5150, 6998
BstAUI TGTACA 2 cut(s) 3469, 7217
BstBAI YACGTR 2 cut(s) 2774, 4070
BstBI TTCGAA 1 cut(s) 5762
BstDSI CCRYGG 3 cut(s) 1296, 3414, 3803
BstFNI CGCG 2 cut(s) 2130, 3162
BstH2I RGCGCY 1 cut(s) 2488
BstHHI GCGC 4 cut(s) 2487, 3912, 4690, 6801
BstMCI CGRYCG 1 cut(s) 7188
BstNSI RCATGY 7 cut(s) 899, 945, 1158, 1383, 3211, 4042, 5097
BstSLI GKGCMC 4 cut(s) 3508, 3850, 5557, 7492
BstSNI TACGTA 1 cut(s) 2774
BstUI CGCG 2 cut(s) 2130, 3162
BstV2I GAAGAC 5 cut(s) 126, 3257, 4079, 5297, 5427
BstX2I RGATCY 8 cut(s) 335, 674, 686, 1351, 1462, 4605, 6982, 7697
BstXI CCANNNNNNTGG 1 cut(s) 6116
BstYI RGATCY 8 cut(s) 335, 674, 686, 1351, 1462, 4605, 6982, 7697
BstZ17I GTATAC 1 cut(s) 6715
Bsu15I ATCGAT 1 cut(s) 2304
Bsu36I CCTNAGG 3 cut(s) 1944, 3579, 3630
BsuRI GGCC 9 cut(s) 769, 1956, 5134, 6194, 6956, 7127, 7131, 7146, 7490
BsuTUI ATCGAT 1 cut(s) 2304
BtgI CCRYGG 3 cut(s) 1296, 3414, 3803
BtgZI GCGATG 1 cut(s) 4815
BtrI CACGTC 2 cut(s) 1146, 1772
BtsI GCAGTG 4 cut(s) 3538, 3561, 5187, 5964
BveI ACCTGC 3 cut(s) 4504, 7261, 7319
CaiI CAGNNNCTG 4 cut(s) 101, 3980, 6415, 7066
CciI TCATGA 6 cut(s) 667, 3457, 5005, 5644, 6376, 6781
CfoI GCGC 4 cut(s) 2487, 3912, 4690, 6801
Cfr10I RCCGGY 1 cut(s) 7127
ClaI ATCGAT 1 cut(s) 2304
CseI GACGC 3 cut(s) 3119, 4808, 5181
CsiI ACCWGGT 2 cut(s) 1734, 7591
DraIII CACNNNGTG 2 cut(s) 5141, 5525
DrdI GACNNNNNNGTC 1 cut(s) 5053
DriI GACNNNNNGTC 1 cut(s) 273
DseDI GACNNNNNNGTC 1 cut(s) 5053
EaeI YGGCCR 2 cut(s) 6954, 7125
Eam1105I GACNNNNNGTC 1 cut(s) 273
EciI GGCGGA 1 cut(s) 6902
Ecl136II GAGCTC 2 cut(s) 871, 2134
Eco105I TACGTA 1 cut(s) 2774
Eco130I CCWWGG 4 cut(s) 764, 1296, 4946, 7321
Eco147I AGGCCT 1 cut(s) 769
Eco24I GRGCYC 5 cut(s) 176, 873, 2136, 3346, 7492
Eco31I GGTCTC 1 cut(s) 7627
Eco32I GATATC 2 cut(s) 4242, 5818
Eco47I GGWCC 8 cut(s) 455, 1119, 5075, 5102, 5987, 6504, 7019, 7069
Eco53kI GAGCTC 2 cut(s) 871, 2134
Eco57I CTGAAG 5 cut(s) 78, 4292, 4565, 5922, 6447
Eco81I CCTNAGG 3 cut(s) 1944, 3579, 3630
Eco88I CYCGRG 1 cut(s) 489
EcoICRI GAGCTC 2 cut(s) 871, 2134
EcoO109I RGGNCCY 4 cut(s) 455, 1954, 7019, 7488
EcoRI GAATTC 2 cut(s) 1936, 4468
EcoRV GATATC 2 cut(s) 4242, 5818
EcoT14I CCWWGG 4 cut(s) 764, 1296, 4946, 7321
EcoT22I ATGCAT 1 cut(s) 6980
EcoT38I GRGCYC 5 cut(s) 176, 873, 2136, 3346, 7492
ErhI CCWWGG 4 cut(s) 764, 1296, 4946, 7321
Esp3I CGTCTC 1 cut(s) 1136
FalI AAGNNNNNCTT 8 cut(s) 118, 150, 491, 523, 1677, 1709, 7008, 7040
FaqI GGGAC 2 cut(s) 736, 5088
FauI CCCGC 3 cut(s) 6732, 7185, 7501
FauNDI CATATG 1 cut(s) 2707
FbaI TGATCA 6 cut(s) 826, 2167, 2638, 2905, 5176, 6439
FblI GTMKAC 5 cut(s) 975, 4284, 6105, 6596, 6714
FriOI GRGCYC 5 cut(s) 176, 873, 2136, 3346, 7492
FseI GGCCGGCC 1 cut(s) 7131
GlaI GCGC 4 cut(s) 2486, 3911, 4689, 6800
GsaI CCCAGC 4 cut(s) 3273, 3557, 7063, 7176
HaeII RGCGCY 1 cut(s) 2488
HaeIII GGCC 9 cut(s) 769, 1956, 5134, 6194, 6956, 7127, 7131, 7146, 7490
HapII CCGG 9 cut(s) 1265, 2893, 3319, 3607, 3838, 5990, 6350, 6502, 7128
HgaI GACGC 3 cut(s) 3119, 4808, 5181
HhaI GCGC 4 cut(s) 2487, 3912, 4690, 6801
Hin6I GCGC 4 cut(s) 2485, 3910, 4688, 6799
HinP1I GCGC 4 cut(s) 2485, 3910, 4688, 6799
HincII GTYRAC 5 cut(s) 267, 939, 4285, 4494, 5408
HindII GTYRAC 5 cut(s) 267, 939, 4285, 4494, 5408
HindIII AAGCTT 3 cut(s) 527, 786, 3002
HpaII CCGG 9 cut(s) 1265, 2893, 3319, 3607, 3838, 5990, 6350, 6502, 7128
Hpy99I CGWCG 3 cut(s) 1776, 1983, 6855
HpyCH4IV ACGT 9 cut(s) 1029, 1145, 1771, 2773, 2828, 3407, 4069, 4810, 5658
HpySE526I ACGT 9 cut(s) 1029, 1145, 1771, 2773, 2828, 3407, 4069, 4810, 5658
HspAI GCGC 4 cut(s) 2485, 3910, 4688, 6799
Kpn2I TCCGGA 1 cut(s) 1264
KpnI GGTACC 1 cut(s) 1676
KroI GCCGGC 1 cut(s) 7127
KroNI GCCGGC 1 cut(s) 7129
Ksp22I TGATCA 6 cut(s) 826, 2167, 2638, 2905, 5176, 6439
LguI GCTCTTC 3 cut(s) 861, 5898, 7533
MabI ACCWGGT 2 cut(s) 1734, 7591
MaeII ACGT 9 cut(s) 1029, 1145, 1771, 2773, 2828, 3407, 4069, 4810, 5658
MbiI CCGCTC 1 cut(s) 7190
MfeI CAATTG 3 cut(s) 4330, 4616, 6321
MflI RGATCY 8 cut(s) 335, 674, 686, 1351, 1462, 4605, 6982, 7697
MluI ACGCGT 1 cut(s) 3160
MlyI GAGTC 7 cut(s) 262, 1571, 2606, 2732, 2994, 4055, 4093
MmeI TCCRAC 6 cut(s) 5, 2089, 2842, 4749, 4932, 7298
Mph1103I ATGCAT 1 cut(s) 6980
MroI TCCGGA 1 cut(s) 1264
MroNI GCCGGC 1 cut(s) 7127
MroXI GAANNNNTTC 7 cut(s) 506, 3209, 3588, 4170, 4299, 6345, 6549
MslI CAYNNNNRTG 6 cut(s) 1839, 2145, 3206, 3747, 3858, 7692
MspA1I CMGCKG 5 cut(s) 2075, 2506, 6412, 6467, 7066
MspCI CTTAAG 2 cut(s) 124, 4814
MspI CCGG 9 cut(s) 1265, 2893, 3319, 3607, 3838, 5990, 6350, 6502, 7128
MunI CAATTG 3 cut(s) 4330, 4616, 6321
Mva1269I GAATGC 6 cut(s) 908, 1927, 1928, 2158, 4961, 7269
MvnI CGCG 2 cut(s) 2130, 3162
NaeI GCCGGC 1 cut(s) 7129
NciI CCSGG 3 cut(s) 2893, 3608, 5991
NcoI CCATGG 1 cut(s) 1296
NdeI CATATG 1 cut(s) 2707
NgoMIV GCCGGC 1 cut(s) 7127
NmeAIII GCCGAG 2 cut(s) 6982, 7290
NmuCI GTSAC 9 cut(s) 995, 1738, 1814, 3314, 4539, 5044, 5293, 5920, 6214
NsiI ATGCAT 1 cut(s) 6980
NspI RCATGY 7 cut(s) 899, 945, 1158, 1383, 3211, 4042, 5097
NspV TTCGAA 1 cut(s) 5762
PaeR7I CTCGAG 1 cut(s) 489
PagI TCATGA 6 cut(s) 667, 3457, 5005, 5644, 6376, 6781
PaqCI CACCTGC 2 cut(s) 7261, 7319
PceI AGGCCT 1 cut(s) 769
PciI ACATGT 4 cut(s) 895, 941, 3207, 5093
PciSI GCTCTTC 3 cut(s) 861, 5898, 7533
PcsI WCGNNNNNNNCGW 3 cut(s) 2825, 4816, 7667
PctI GAATGC 6 cut(s) 908, 1927, 1928, 2158, 4961, 7269
PdiI GCCGGC 1 cut(s) 7129
PdmI GAANNNNTTC 7 cut(s) 506, 3209, 3588, 4170, 4299, 6345, 6549
PflFI GACNNNGTC 1 cut(s) 459
PflMI CCANNNNNTGG 3 cut(s) 3884, 5072, 7066
PfoI TCCNGGA 2 cut(s) 3606, 3979
PleI GAGTC 7 cut(s) 262, 1570, 2606, 2732, 2993, 4054, 4092
PpsI GAGTC 7 cut(s) 262, 1570, 2606, 2732, 2993, 4054, 4092
Ppu21I YACGTR 2 cut(s) 2774, 4070
PpuMI RGGWCCY 2 cut(s) 455, 7019
PscI ACATGT 4 cut(s) 895, 941, 3207, 5093
PsiI TTATAA 3 cut(s) 498, 852, 1961
Psp124BI GAGCTC 2 cut(s) 873, 2136
Psp1406I AACGTT 1 cut(s) 5658
Psp5II RGGWCCY 2 cut(s) 455, 7019
PspFI CCCAGC 4 cut(s) 3269, 3553, 7059, 7172
PspOMI GGGCCC 1 cut(s) 7488
PspPPI RGGWCCY 2 cut(s) 455, 7019
PspXI VCTCGAGB 1 cut(s) 489
PsrI GAACNNNNNNTAC 4 cut(s) 82, 114, 2029, 2061
PstI CTGCAG 9 cut(s) 1351, 4230, 4261, 4423, 5967, 6133, 6271, 7141, 7152
PstNI CAGNNNCTG 4 cut(s) 101, 3980, 6415, 7066
PsuI RGATCY 8 cut(s) 335, 674, 686, 1351, 1462, 4605, 6982, 7697
PsyI GACNNNGTC 1 cut(s) 459
PvuII CAGCTG 5 cut(s) 2075, 2506, 6412, 6467, 7066
RigI GGCCGGCC 1 cut(s) 7131
RseI CAYNNNNRTG 6 cut(s) 1839, 2145, 3206, 3747, 3858, 7692
SacI GAGCTC 2 cut(s) 873, 2136
SalI GTCGAC 1 cut(s) 4283
SapI GCTCTTC 3 cut(s) 861, 5898, 7533
ScaI AGTACT 5 cut(s) 91, 184, 2397, 2759, 3057
SchI GAGTC 7 cut(s) 262, 1571, 2606, 2732, 2994, 4055, 4093
SexAI ACCWGGT 2 cut(s) 1734, 7591
Sfr274I CTCGAG 1 cut(s) 489
SfuI TTCGAA 1 cut(s) 5762
SinI GGWCC 8 cut(s) 455, 1119, 5075, 5102, 5987, 6504, 7019, 7069
SlaI CTCGAG 1 cut(s) 489
SmiMI CAYNNNNRTG 6 cut(s) 1839, 2145, 3206, 3747, 3858, 7692
SnaBI TACGTA 1 cut(s) 2774
SpeI ACTAGT 1 cut(s) 4967
SseBI AGGCCT 1 cut(s) 769
SsiI CCGC 8 cut(s) 370, 4372, 6603, 6725, 6887, 7178, 7188, 7508
SspI AATATT 2 cut(s) 2801, 3812
SstI GAGCTC 2 cut(s) 873, 2136
StuI AGGCCT 1 cut(s) 769
StyI CCWWGG 4 cut(s) 764, 1296, 4946, 7321
TaiI ACGT 9 cut(s) 1032, 1148, 1774, 2776, 2831, 3410, 4072, 4813, 5661
TaqII GACCGA 2 cut(s) 4707, 6570
TseFI GTSAC 9 cut(s) 995, 1738, 1814, 3314, 4539, 5044, 5293, 5920, 6214
Tsp45I GTSAC 9 cut(s) 995, 1738, 1814, 3314, 4539, 5044, 5293, 5920, 6214
TspGWI ACGGA 5 cut(s) 878, 2033, 2353, 3170, 3792
Tth111I GACNNNGTC 1 cut(s) 459
Van91I CCANNNNNTGG 3 cut(s) 3884, 5072, 7066
Vha464I CTTAAG 2 cut(s) 124, 4814
VpaK11BI GGWCC 8 cut(s) 455, 1119, 5075, 5102, 5987, 6504, 7019, 7069
XbaI TCTAGA 3 cut(s) 1459, 2107, 4693
XceI RCATGY 7 cut(s) 899, 945, 1158, 1383, 3211, 4042, 5097
XcmI CCANNNNNNNNNTGG 3 cut(s) 2072, 3077, 7120
XhoI CTCGAG 1 cut(s) 489
XmaJI CCTAGG 1 cut(s) 764
XmiI GTMKAC 5 cut(s) 975, 4284, 6105, 6596, 6714
XmnI GAANNNNTTC 7 cut(s) 506, 3209, 3588, 4170, 4299, 6345, 6549
ZrmI AGTACT 5 cut(s) 91, 184, 2397, 2759, 3057
Zsp2I ATGCAT 1 cut(s) 6980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.