helicase protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 456, 1880 |
| AarI | CACCTGC | 3 cut(s) | 811, 7087, 7093 |
| Acc36I | ACCTGC | 4 cut(s) | 811, 7047, 7087, 7093 |
| Acc65I | GGTACC | 2 cut(s) | 962, 1591 |
| AccB1I | GGYRCC | 6 cut(s) | 962, 1591, 2206, 2288, 3433, 5377 |
| AccBSI | CCGCTC | 1 cut(s) | 675 |
| AccI | GTMKAC | 1 cut(s) | 885 |
| AccII | CGCG | 4 cut(s) | 1803, 2040, 3090, 3825 |
| AccIII | TCCGGA | 1 cut(s) | 4021 |
| AcoI | YGGCCR | 2 cut(s) | 418, 7017 |
| AcvI | CACGTG | 1 cut(s) | 5159 |
| AcyI | GRCGYC | 1 cut(s) | 4684 |
| AdeI | CACNNNGTG | 2 cut(s) | 1665, 5162 |
| AflII | CTTAAG | 4 cut(s) | 2471, 2954, 4766, 6671 |
| AflIII | ACRYGT | 3 cut(s) | 814, 2012, 3088 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 243 |
| AhlI | ACTAGT | 3 cut(s) | 4973, 6497, 7337 |
| AjiI | CACGTC | 1 cut(s) | 7301 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1728, 1760, 6833, 6865 |
| AleI | CACNNNNGTG | 1 cut(s) | 2055 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 552, 584, 2177, 2209, 3727, 3759 |
| Alw21I | GWGCWC | 5 cut(s) | 2046, 3543, 6007, 6352, 7525 |
| Alw44I | GTGCAC | 1 cut(s) | 6003 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 71, 757, 3893, 6958 |
| Ama87I | CYCGRG | 3 cut(s) | 173, 447, 6594 |
| Aor13HI | TCCGGA | 1 cut(s) | 4021 |
| AoxI | GGCC | 9 cut(s) | 418, 686, 1873, 5153, 6102, 6386, 6479, 7017, 7424 |
| ApaLI | GTGCAC | 1 cut(s) | 6003 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 3087, 3119, 5446, 5478 |
| AseI | ATTAAT | 1 cut(s) | 2720 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1548, 3137, 3516, 4164, 5094 |
| Asp718I | GGTACC | 2 cut(s) | 962, 1591 |
| AspLEI | GCGC | 4 cut(s) | 1803, 3060, 4403, 6601 |
| AspS9I | GGNCC | 4 cut(s) | 1041, 1873, 4810, 7550 |
| AsuC2I | CCSGG | 2 cut(s) | 3298, 7199 |
| AsuII | TTCGAA | 2 cut(s) | 2349, 5465 |
| AsuNHI | GCTAGC | 1 cut(s) | 1981 |
| AvaI | CYCGRG | 3 cut(s) | 173, 447, 6594 |
| AvaII | GGWCC | 3 cut(s) | 1041, 4810, 7550 |
| AxyI | CCTNAGG | 3 cut(s) | 1863, 3558, 4936 |
| BaeGI | GKGCMC | 5 cut(s) | 3436, 5380, 6007, 7198, 7345 |
| BalI | TGGCCA | 1 cut(s) | 7019 |
| BamHI | GGATCC | 3 cut(s) | 3896, 5497, 5920 |
| BanI | GGYRCC | 6 cut(s) | 962, 1591, 2206, 2288, 3433, 5377 |
| BanII | GRGCYC | 6 cut(s) | 146, 579, 2046, 3543, 4909, 5588 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 955, 987, 7510, 7542 |
| BauI | CACGAG | 2 cut(s) | 3183, 4908 |
| BbrPI | CACGTG | 1 cut(s) | 5159 |
| BbsI | GAAGAC | 3 cut(s) | 1713, 1799, 6402 |
| Bbv12I | GWGCWC | 5 cut(s) | 2046, 3543, 6007, 6352, 7525 |
| BbvCI | CCTCAGC | 1 cut(s) | 6855 |
| BceAI | ACGGC | 1 cut(s) | 405 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 4201, 4235, 4991, 5025 |
| BciVI | GTATCC | 3 cut(s) | 76, 6208, 7133 |
| BclI | TGATCA | 5 cut(s) | 2151, 2542, 2833, 3228, 6058 |
| BcnI | CCSGG | 2 cut(s) | 3298, 7199 |
| BcuI | ACTAGT | 3 cut(s) | 4973, 6497, 7337 |
| BfoI | RGCGCY | 2 cut(s) | 4404, 6602 |
| BfrI | CTTAAG | 4 cut(s) | 2471, 2954, 4766, 6671 |
| BfuAI | ACCTGC | 4 cut(s) | 811, 7047, 7087, 7093 |
| BfuI | GTATCC | 3 cut(s) | 76, 6208, 7133 |
| BglII | AGATCT | 3 cut(s) | 1270, 5005, 6433 |
| BlpI | GCTNAGC | 1 cut(s) | 3650 |
| BmcAI | AGTACT | 5 cut(s) | 154, 2304, 2469, 2690, 2985 |
| Bme18I | GGWCC | 3 cut(s) | 1041, 4810, 7550 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 243 |
| BmeT110I | CYCGRG | 3 cut(s) | 173, 447, 6594 |
| BmgBI | CACGTC | 1 cut(s) | 7301 |
| BmgT120I | GGNCC | 4 cut(s) | 1041, 1873, 4810, 7550 |
| BmrI | ACTGGG | 1 cut(s) | 7529 |
| BmtI | GCTAGC | 1 cut(s) | 1985 |
| BmuI | ACTGGG | 1 cut(s) | 7529 |
| BoxI | GACNNNNGTC | 1 cut(s) | 4815 |
| BpiI | GAAGAC | 3 cut(s) | 1713, 1799, 6402 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 302, 334, 1112, 1144, 1185, 1217, 3530, 3562 |
| BpmI | CTGGAG | 8 cut(s) | 93, 2007, 3197, 3639, 4586, 6981, 7290, 7296 |
| Bpu10I | CCTNAGC | 3 cut(s) | 319, 2552, 6855 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3650 |
| Bpu14I | TTCGAA | 2 cut(s) | 2349, 5465 |
| BpuEI | CTTGAG | 8 cut(s) | 661, 1961, 4058, 4841, 4850, 4951, 5471, 5681 |
| BpuMI | CCSGG | 2 cut(s) | 3298, 7199 |
| BsaAI | YACGTR | 2 cut(s) | 2435, 5159 |
| BsaBI | GATNNNNATC | 2 cut(s) | 651, 2136 |
| BsaHI | GRCGYC | 1 cut(s) | 4684 |
| BsaI | GGTCTC | 3 cut(s) | 5135, 5783, 7477 |
| BsaWI | WCCGGW | 3 cut(s) | 4021, 6427, 6864 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 552, 582, 3629, 3659, 4331, 4361 |
| Bse118I | RCCGGY | 1 cut(s) | 1899 |
| Bse21I | CCTNAGG | 3 cut(s) | 1863, 3558, 4936 |
| Bse3DI | GCAATG | 1 cut(s) | 1028 |
| Bse8I | GATNNNNATC | 2 cut(s) | 651, 2136 |
| BseAI | TCCGGA | 1 cut(s) | 4021 |
| BseJI | GATNNNNATC | 2 cut(s) | 651, 2136 |
| BseMI | GCAATG | 1 cut(s) | 1028 |
| BseSI | GKGCMC | 5 cut(s) | 3436, 5380, 6007, 7198, 7345 |
| BseYI | CCCAGC | 4 cut(s) | 3481, 5146, 7064, 7126 |
| BsgI | GTGCAG | 6 cut(s) | 985, 2438, 6113, 6561, 7025, 7065 |
| Bsh1236I | CGCG | 4 cut(s) | 1803, 2040, 3090, 3825 |
| BshFI | GGCC | 9 cut(s) | 420, 688, 1875, 5155, 6104, 6388, 6481, 7019, 7426 |
| BshNI | GGYRCC | 6 cut(s) | 962, 1591, 2206, 2288, 3433, 5377 |
| BsiHKAI | GWGCWC | 5 cut(s) | 2046, 3543, 6007, 6352, 7525 |
| BsiHKCI | CYCGRG | 3 cut(s) | 173, 447, 6594 |
| BsiSI | CCGG | 6 cut(s) | 1900, 3298, 4022, 6428, 6865, 7199 |
| BsiWI | CGTACG | 1 cut(s) | 7526 |
| BslFI | GGGAC | 6 cut(s) | 655, 677, 1078, 1407, 5108, 7467 |
| BsmFI | GGGAC | 6 cut(s) | 655, 677, 1078, 1407, 5108, 7467 |
| BsmI | GAATGC | 6 cut(s) | 1846, 1847, 2068, 3101, 4967, 5713 |
| BsnI | GGCC | 9 cut(s) | 420, 688, 1875, 5155, 6104, 6388, 6481, 7019, 7426 |
| Bso31I | GGTCTC | 3 cut(s) | 5135, 5783, 7477 |
| BsoBI | CYCGRG | 3 cut(s) | 173, 447, 6594 |
| Bsp119I | TTCGAA | 2 cut(s) | 2349, 5465 |
| Bsp13I | TCCGGA | 1 cut(s) | 4021 |
| Bsp1407I | TGTACA | 2 cut(s) | 2659, 6973 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3650 |
| Bsp19I | CCATGG | 1 cut(s) | 3466 |
| BspANI | GGCC | 9 cut(s) | 420, 688, 1875, 5155, 6104, 6388, 6481, 7019, 7426 |
| BspEI | TCCGGA | 1 cut(s) | 4021 |
| BspFNI | CGCG | 4 cut(s) | 1803, 2040, 3090, 3825 |
| BspHI | TCATGA | 4 cut(s) | 468, 5560, 6286, 6679 |
| BspMAI | CTGCAG | 6 cut(s) | 3925, 4417, 5089, 5877, 6912, 7033 |
| BspMI | ACCTGC | 4 cut(s) | 811, 7047, 7087, 7093 |
| BspOI | GCTAGC | 1 cut(s) | 1985 |
| BspQI | GCTCTTC | 2 cut(s) | 3548, 7383 |
| BspT104I | TTCGAA | 2 cut(s) | 2349, 5465 |
| BspT107I | GGYRCC | 6 cut(s) | 962, 1591, 2206, 2288, 3433, 5377 |
| BspTI | CTTAAG | 4 cut(s) | 2471, 2954, 4766, 6671 |
| BspTNI | GGTCTC | 3 cut(s) | 5135, 5783, 7477 |
| BsrBI | CCGCTC | 1 cut(s) | 675 |
| BsrDI | GCAATG | 1 cut(s) | 1028 |
| BsrFI | RCCGGY | 1 cut(s) | 1899 |
| BsrGI | TGTACA | 2 cut(s) | 2659, 6973 |
| BssAI | RCCGGY | 1 cut(s) | 1899 |
| BssNI | GRCGYC | 1 cut(s) | 4684 |
| BssSI | CACGAG | 2 cut(s) | 3183, 4908 |
| BssT1I | CCWWGG | 7 cut(s) | 683, 3466, 3900, 4952, 6105, 6583, 7174 |
| Bst2BI | CACGAG | 2 cut(s) | 3183, 4908 |
| Bst6I | CTCTTC | 5 cut(s) | 356, 3548, 4041, 4070, 7383 |
| BstACI | GRCGYC | 1 cut(s) | 4684 |
| BstAFI | CTTAAG | 4 cut(s) | 2471, 2954, 4766, 6671 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 6896 |
| BstAUI | TGTACA | 2 cut(s) | 2659, 6973 |
| BstBAI | YACGTR | 2 cut(s) | 2435, 5159 |
| BstBI | TTCGAA | 2 cut(s) | 2349, 5465 |
| BstDSI | CCRYGG | 1 cut(s) | 3466 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1191, 6800 |
| BstFNI | CGCG | 4 cut(s) | 1803, 2040, 3090, 3825 |
| BstH2I | RGCGCY | 2 cut(s) | 4404, 6602 |
| BstHHI | GCGC | 4 cut(s) | 1803, 3060, 4403, 6601 |
| BstNSI | RCATGY | 5 cut(s) | 818, 1302, 2016, 2112, 5307 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 4815 |
| BstSLI | GKGCMC | 5 cut(s) | 3436, 5380, 6007, 7198, 7345 |
| BstSNI | TACGTA | 1 cut(s) | 2435 |
| BstUI | CGCG | 4 cut(s) | 1803, 2040, 3090, 3825 |
| BstV2I | GAAGAC | 3 cut(s) | 1713, 1799, 6402 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3005, 6026 |
| Bsu36I | CCTNAGG | 3 cut(s) | 1863, 3558, 4936 |
| BsuI | GTATCC | 3 cut(s) | 76, 6208, 7133 |
| BsuRI | GGCC | 9 cut(s) | 420, 688, 1875, 5155, 6104, 6388, 6481, 7019, 7426 |
| BtgI | CCRYGG | 1 cut(s) | 3466 |
| BtrI | CACGTC | 1 cut(s) | 7301 |
| BtsI | GCAGTG | 3 cut(s) | 603, 755, 7323 |
| BveI | ACCTGC | 4 cut(s) | 811, 7047, 7087, 7093 |
| CaiI | CAGNNNCTG | 4 cut(s) | 71, 757, 3893, 6958 |
| CciI | TCATGA | 4 cut(s) | 468, 5560, 6286, 6679 |
| CfoI | GCGC | 4 cut(s) | 1803, 3060, 4403, 6601 |
| Cfr10I | RCCGGY | 1 cut(s) | 1899 |
| Cfr13I | GGNCC | 4 cut(s) | 1041, 1873, 4810, 7550 |
| CseI | GACGC | 2 cut(s) | 3079, 4673 |
| CsiI | ACCWGGT | 2 cut(s) | 1653, 7441 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 538, 573, 1677, 1712, 2905, 2940 |
| DraI | TTTAAA | 1 cut(s) | 490 |
| DraIII | CACNNNGTG | 2 cut(s) | 1665, 5162 |
| DriI | GACNNNNNGTC | 1 cut(s) | 243 |
| EaeI | YGGCCR | 2 cut(s) | 418, 7017 |
| Eam1104I | CTCTTC | 5 cut(s) | 356, 3548, 4041, 4070, 7383 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 243 |
| EarI | CTCTTC | 5 cut(s) | 356, 3548, 4041, 4070, 7383 |
| EciI | GGCGGA | 1 cut(s) | 5781 |
| Ecl136II | GAGCTC | 2 cut(s) | 2044, 3541 |
| Eco105I | TACGTA | 1 cut(s) | 2435 |
| Eco130I | CCWWGG | 7 cut(s) | 683, 3466, 3900, 4952, 6105, 6583, 7174 |
| Eco147I | AGGCCT | 1 cut(s) | 688 |
| Eco24I | GRGCYC | 6 cut(s) | 146, 579, 2046, 3543, 4909, 5588 |
| Eco31I | GGTCTC | 3 cut(s) | 5135, 5783, 7477 |
| Eco32I | GATATC | 3 cut(s) | 2667, 3285, 4236 |
| Eco47I | GGWCC | 3 cut(s) | 1041, 4810, 7550 |
| Eco53kI | GAGCTC | 2 cut(s) | 2044, 3541 |
| Eco72I | CACGTG | 1 cut(s) | 5159 |
| Eco81I | CCTNAGG | 3 cut(s) | 1863, 3558, 4936 |
| Eco88I | CYCGRG | 3 cut(s) | 173, 447, 6594 |
| EcoICRI | GAGCTC | 2 cut(s) | 2044, 3541 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1191, 6800 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1873 |
| EcoRI | GAATTC | 3 cut(s) | 4462, 6922, 6937 |
| EcoRV | GATATC | 3 cut(s) | 2667, 3285, 4236 |
| EcoT14I | CCWWGG | 7 cut(s) | 683, 3466, 3900, 4952, 6105, 6583, 7174 |
| EcoT22I | ATGCAT | 1 cut(s) | 6878 |
| EcoT38I | GRGCYC | 6 cut(s) | 146, 579, 2046, 3543, 4909, 5588 |
| ErhI | CCWWGG | 7 cut(s) | 683, 3466, 3900, 4952, 6105, 6583, 7174 |
| FaqI | GGGAC | 6 cut(s) | 655, 677, 1078, 1407, 5108, 7467 |
| FauI | CCCGC | 6 cut(s) | 680, 3818, 5050, 6630, 7276, 7561 |
| FauNDI | CATATG | 1 cut(s) | 1168 |
| FbaI | TGATCA | 5 cut(s) | 2151, 2542, 2833, 3228, 6058 |
| FblI | GTMKAC | 1 cut(s) | 885 |
| FriOI | GRGCYC | 6 cut(s) | 146, 579, 2046, 3543, 4909, 5588 |
| GlaI | GCGC | 4 cut(s) | 1802, 3059, 4402, 6600 |
| GsaI | CCCAGC | 4 cut(s) | 3485, 5150, 7068, 7130 |
| GsuI | CTGGAG | 8 cut(s) | 93, 2007, 3197, 3639, 4586, 6981, 7290, 7296 |
| HaeII | RGCGCY | 2 cut(s) | 4404, 6602 |
| HaeIII | GGCC | 9 cut(s) | 420, 688, 1875, 5155, 6104, 6388, 6481, 7019, 7426 |
| HapII | CCGG | 6 cut(s) | 1900, 3298, 4022, 6428, 6865, 7199 |
| HgaI | GACGC | 2 cut(s) | 3079, 4673 |
| HhaI | GCGC | 4 cut(s) | 1803, 3060, 4403, 6601 |
| Hin1I | GRCGYC | 1 cut(s) | 4684 |
| Hin6I | GCGC | 4 cut(s) | 1801, 3058, 4401, 6599 |
| HinP1I | GCGC | 4 cut(s) | 1801, 3058, 4401, 6599 |
| HincII | GTYRAC | 5 cut(s) | 237, 749, 858, 3957, 4279 |
| HindII | GTYRAC | 5 cut(s) | 237, 749, 858, 3957, 4279 |
| HindIII | AAGCTT | 6 cut(s) | 705, 1235, 1360, 2930, 4427, 4763 |
| HpaII | CCGG | 6 cut(s) | 1900, 3298, 4022, 6428, 6865, 7199 |
| Hpy99I | CGWCG | 4 cut(s) | 1092, 3095, 5366, 6753 |
| HpyCH4IV | ACGT | 7 cut(s) | 2434, 4521, 4816, 5158, 5361, 5574, 7300 |
| HpySE526I | ACGT | 7 cut(s) | 2434, 4521, 4816, 5158, 5361, 5574, 7300 |
| Hsp92I | GRCGYC | 1 cut(s) | 4684 |
| HspAI | GCGC | 4 cut(s) | 1801, 3058, 4401, 6599 |
| Kpn2I | TCCGGA | 1 cut(s) | 4021 |
| KpnI | GGTACC | 2 cut(s) | 966, 1595 |
| KroI | GCCGGC | 1 cut(s) | 1899 |
| KroNI | GCCGGC | 1 cut(s) | 1901 |
| Ksp22I | TGATCA | 5 cut(s) | 2151, 2542, 2833, 3228, 6058 |
| LguI | GCTCTTC | 2 cut(s) | 3548, 7383 |
| MabI | ACCWGGT | 2 cut(s) | 1653, 7441 |
| MaeII | ACGT | 7 cut(s) | 2434, 4521, 4816, 5158, 5361, 5574, 7300 |
| MbiI | CCGCTC | 1 cut(s) | 675 |
| MfeI | CAATTG | 4 cut(s) | 839, 3003, 4324, 4713 |
| MlsI | TGGCCA | 1 cut(s) | 7019 |
| MluI | ACGCGT | 1 cut(s) | 3088 |
| MluNI | TGGCCA | 1 cut(s) | 7019 |
| MmeI | TCCRAC | 9 cut(s) | 1133, 1425, 2731, 3693, 4226, 4755, 4938, 6281, 6792 |
| Mox20I | TGGCCA | 1 cut(s) | 7019 |
| Mph1103I | ATGCAT | 1 cut(s) | 6878 |
| MroI | TCCGGA | 1 cut(s) | 4021 |
| MroNI | GCCGGC | 1 cut(s) | 1899 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1548, 3137, 3516, 4164, 5094 |
| MscI | TGGCCA | 1 cut(s) | 7019 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1758, 2055, 6684 |
| Msp20I | TGGCCA | 1 cut(s) | 7019 |
| MspA1I | CMGCKG | 7 cut(s) | 1208, 2894, 4843, 6368, 6958, 7001, 7556 |
| MspCI | CTTAAG | 4 cut(s) | 2471, 2954, 4766, 6671 |
| MspI | CCGG | 6 cut(s) | 1900, 3298, 4022, 6428, 6865, 7199 |
| MunI | CAATTG | 4 cut(s) | 839, 3003, 4324, 4713 |
| Mva1269I | GAATGC | 6 cut(s) | 1846, 1847, 2068, 3101, 4967, 5713 |
| MvnI | CGCG | 4 cut(s) | 1803, 2040, 3090, 3825 |
| NaeI | GCCGGC | 1 cut(s) | 1901 |
| NciI | CCSGG | 2 cut(s) | 3298, 7199 |
| NcoI | CCATGG | 1 cut(s) | 3466 |
| NdeI | CATATG | 1 cut(s) | 1168 |
| NgoMIV | GCCGGC | 1 cut(s) | 1899 |
| NheI | GCTAGC | 1 cut(s) | 1981 |
| NmeAIII | GCCGAG | 1 cut(s) | 7402 |
| NmuCI | GTSAC | 9 cut(s) | 500, 1657, 3242, 5530, 5830, 6040, 6484, 6713, 7251 |
| NsiI | ATGCAT | 1 cut(s) | 6878 |
| NspI | RCATGY | 5 cut(s) | 818, 1302, 2016, 2112, 5307 |
| NspV | TTCGAA | 2 cut(s) | 2349, 5465 |
| OliI | CACNNNNGTG | 1 cut(s) | 2055 |
| PaeR7I | CTCGAG | 3 cut(s) | 173, 447, 6594 |
| PagI | TCATGA | 4 cut(s) | 468, 5560, 6286, 6679 |
| PaqCI | CACCTGC | 3 cut(s) | 811, 7087, 7093 |
| PceI | AGGCCT | 1 cut(s) | 688 |
| PciI | ACATGT | 2 cut(s) | 814, 2012 |
| PciSI | GCTCTTC | 2 cut(s) | 3548, 7383 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3641 |
| PctI | GAATGC | 6 cut(s) | 1846, 1847, 2068, 3101, 4967, 5713 |
| PdiI | GCCGGC | 1 cut(s) | 1901 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1548, 3137, 3516, 4164, 5094 |
| Pfl23II | CGTACG | 1 cut(s) | 7526 |
| PfoI | TCCNGGA | 2 cut(s) | 3534, 3892 |
| PmaCI | CACGTG | 1 cut(s) | 5159 |
| PmlI | CACGTG | 1 cut(s) | 5159 |
| Ppu21I | YACGTR | 2 cut(s) | 2435, 5159 |
| PscI | ACATGT | 2 cut(s) | 814, 2012 |
| PshAI | GACNNNNGTC | 1 cut(s) | 4815 |
| PshBI | ATTAAT | 1 cut(s) | 2720 |
| PsiI | TTATAA | 2 cut(s) | 456, 1880 |
| Psp124BI | GAGCTC | 2 cut(s) | 2046, 3543 |
| PspCI | CACGTG | 1 cut(s) | 5159 |
| PspFI | CCCAGC | 4 cut(s) | 3481, 5146, 7064, 7126 |
| PspLI | CGTACG | 1 cut(s) | 7526 |
| PspPI | GGNCC | 4 cut(s) | 1041, 1873, 4810, 7550 |
| PspXI | VCTCGAGB | 1 cut(s) | 447 |
| PstI | CTGCAG | 6 cut(s) | 3925, 4417, 5089, 5877, 6912, 7033 |
| PstNI | CAGNNNCTG | 4 cut(s) | 71, 757, 3893, 6958 |
| PvuII | CAGCTG | 6 cut(s) | 1208, 2894, 4843, 6368, 6958, 7001 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1758, 2055, 6684 |
| SacI | GAGCTC | 2 cut(s) | 2046, 3543 |
| SapI | GCTCTTC | 2 cut(s) | 3548, 7383 |
| Sau96I | GGNCC | 4 cut(s) | 1041, 1873, 4810, 7550 |
| ScaI | AGTACT | 5 cut(s) | 154, 2304, 2469, 2690, 2985 |
| SexAI | ACCWGGT | 2 cut(s) | 1653, 7441 |
| Sfr274I | CTCGAG | 3 cut(s) | 173, 447, 6594 |
| SfuI | TTCGAA | 2 cut(s) | 2349, 5465 |
| SinI | GGWCC | 3 cut(s) | 1041, 4810, 7550 |
| SlaI | CTCGAG | 3 cut(s) | 173, 447, 6594 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1758, 2055, 6684 |
| SnaBI | TACGTA | 1 cut(s) | 2435 |
| SpeI | ACTAGT | 3 cut(s) | 4973, 6497, 7337 |
| SseBI | AGGCCT | 1 cut(s) | 688 |
| SspI | AATATT | 5 cut(s) | 1638, 3740, 4218, 4550, 6448 |
| SstI | GAGCTC | 2 cut(s) | 2046, 3543 |
| StuI | AGGCCT | 1 cut(s) | 688 |
| StyI | CCWWGG | 7 cut(s) | 683, 3466, 3900, 4952, 6105, 6583, 7174 |
| TaiI | ACGT | 7 cut(s) | 2437, 4524, 4819, 5161, 5364, 5577, 7303 |
| TaqII | GACCGA | 2 cut(s) | 3099, 6059 |
| TatI | WGTACW | 9 cut(s) | 152, 1163, 2302, 2467, 2659, 2688, 2983, 5195, 6973 |
| TauI | GCSGC | 5 cut(s) | 549, 1899, 5189, 6280, 6481 |
| TseFI | GTSAC | 9 cut(s) | 500, 1657, 3242, 5530, 5830, 6040, 6484, 6713, 7251 |
| Tsp45I | GTSAC | 9 cut(s) | 500, 1657, 3242, 5530, 5830, 6040, 6484, 6713, 7251 |
| TspGWI | ACGGA | 6 cut(s) | 355, 1064, 2266, 3633, 3650, 4772 |
| Vha464I | CTTAAG | 4 cut(s) | 2471, 2954, 4766, 6671 |
| VneI | GTGCAC | 1 cut(s) | 6003 |
| VpaK11BI | GGWCC | 3 cut(s) | 1041, 4810, 7550 |
| VspI | ATTAAT | 1 cut(s) | 2720 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1191, 6800 |
| XbaI | TCTAGA | 3 cut(s) | 1378, 2017, 4687 |
| XceI | RCATGY | 5 cut(s) | 818, 1302, 2016, 2112, 5307 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 3005, 3866, 5683 |
| XhoI | CTCGAG | 3 cut(s) | 173, 447, 6594 |
| XmiI | GTMKAC | 1 cut(s) | 885 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1548, 3137, 3516, 4164, 5094 |
| ZrmI | AGTACT | 5 cut(s) | 154, 2304, 2469, 2690, 2985 |
| Zsp2I | ATGCAT | 1 cut(s) | 6878 |