Helicase protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 231, 3509, 4053 |
| AarI | CACCTGC | 3 cut(s) | 3754, 3760, 3778 |
| Acc36I | ACCTGC | 3 cut(s) | 3754, 3760, 3778 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 405 |
| AccI | GTMKAC | 2 cut(s) | 107, 2233 |
| AccII | CGCG | 2 cut(s) | 2160, 4115 |
| AclWI | GGATC | 5 cut(s) | 568, 1599, 1612, 2262, 3558 |
| AcoI | YGGCCR | 2 cut(s) | 772, 1419 |
| AcsI | RAATTY | 9 cut(s) | 1293, 1804, 2369, 2596, 2883, 3033, 3417, 3461, 4180 |
| AcvI | CACGTG | 1 cut(s) | 3764 |
| AcyI | GRCGYC | 1 cut(s) | 149 |
| AfaI | GTAC | 6 cut(s) | 1186, 2803, 2958, 3217, 3790, 4254 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 405, 1225, 1614, 3173, 3502, 3863, 3896, 4184, 4232 |
| AflIII | ACRYGT | 2 cut(s) | 1510, 4238 |
| AhlI | ACTAGT | 1 cut(s) | 3170 |
| AleI | CACNNNNGTG | 1 cut(s) | 1872 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 400, 432, 2046, 2078 |
| Alw21I | GWGCWC | 4 cut(s) | 1159, 1407, 2135, 3769 |
| Alw44I | GTGCAC | 1 cut(s) | 3765 |
| AlwI | GGATC | 5 cut(s) | 568, 1599, 1612, 2262, 3558 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 3139, 3373, 3616 |
| Ama87I | CYCGRG | 1 cut(s) | 3891 |
| AoxI | GGCC | 2 cut(s) | 772, 1419 |
| ApaLI | GTGCAC | 1 cut(s) | 3765 |
| ApoI | RAATTY | 9 cut(s) | 1293, 1804, 2369, 2596, 2883, 3033, 3417, 3461, 4180 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3953, 3985 |
| AseI | ATTAAT | 1 cut(s) | 1446 |
| AspLEI | GCGC | 3 cut(s) | 513, 3372, 3757 |
| AspS9I | GGNCC | 3 cut(s) | 1216, 1832, 2471 |
| AsuC2I | CCSGG | 1 cut(s) | 2375 |
| AsuHPI | GGTGA | 5 cut(s) | 534, 2559, 2718, 3914, 4055 |
| AsuII | TTCGAA | 1 cut(s) | 122 |
| AsuNHI | GCTAGC | 1 cut(s) | 3695 |
| AvaI | CYCGRG | 1 cut(s) | 3891 |
| AvaII | GGWCC | 3 cut(s) | 1216, 1832, 2471 |
| AxyI | CCTNAGG | 2 cut(s) | 345, 365 |
| BaeGI | GKGCMC | 3 cut(s) | 1615, 3769, 3916 |
| BalI | TGGCCA | 1 cut(s) | 774 |
| BamHI | GGATCC | 1 cut(s) | 1604 |
| BanII | GRGCYC | 4 cut(s) | 71, 2135, 2351, 4063 |
| BauI | CACGAG | 1 cut(s) | 1868 |
| BbrPI | CACGTG | 1 cut(s) | 3764 |
| BbsI | GAAGAC | 3 cut(s) | 14, 1085, 4088 |
| Bbv12I | GWGCWC | 4 cut(s) | 1159, 1407, 2135, 3769 |
| BccI | CCATC | 9 cut(s) | 555, 764, 795, 1564, 1980, 2222, 3584, 4074, 4238 |
| BceAI | ACGGC | 3 cut(s) | 1406, 1631, 2735 |
| BciVI | GTATCC | 2 cut(s) | 847, 2902 |
| BcnI | CCSGG | 1 cut(s) | 2375 |
| BcuI | ACTAGT | 1 cut(s) | 3170 |
| BfaI | CTAG | 6 cut(s) | 1394, 2652, 2850, 3171, 3696, 4215 |
| BfmI | CTRYAG | 9 cut(s) | 923, 954, 1067, 1544, 1818, 2234, 3657, 3690, 4077 |
| BfoI | RGCGCY | 1 cut(s) | 3373 |
| BfuAI | ACCTGC | 3 cut(s) | 3754, 3760, 3778 |
| BfuI | GTATCC | 2 cut(s) | 847, 2902 |
| BglII | AGATCT | 3 cut(s) | 844, 1522, 1705 |
| Bme18I | GGWCC | 3 cut(s) | 1216, 1832, 2471 |
| BmeT110I | CYCGRG | 1 cut(s) | 3891 |
| BmgT120I | GGNCC | 3 cut(s) | 1216, 1832, 2471 |
| BmiI | GGNNCC | 4 cut(s) | 1606, 1834, 2472, 3868 |
| BmrI | ACTGGG | 1 cut(s) | 3991 |
| BmsI | GCATC | 9 cut(s) | 51, 1105, 2645, 2749, 2830, 3261, 3478, 3572, 3581 |
| BmtI | GCTAGC | 1 cut(s) | 3699 |
| BmuI | ACTGGG | 1 cut(s) | 3991 |
| BpiI | GAAGAC | 3 cut(s) | 14, 1085, 4088 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1034, 1066, 2417, 2449 |
| BpmI | CTGGAG | 5 cut(s) | 594, 1779, 3467, 3597, 3716 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1653, 3075 |
| Bpu14I | TTCGAA | 1 cut(s) | 122 |
| BpuEI | CTTGAG | 8 cut(s) | 953, 1457, 1547, 1556, 2141, 2444, 2573, 3026 |
| BpuMI | CCSGG | 1 cut(s) | 2375 |
| BsaAI | YACGTR | 2 cut(s) | 2183, 3764 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2997 |
| BsaHI | GRCGYC | 1 cut(s) | 149 |
| BsaJI | CCNNGG | 9 cut(s) | 86, 803, 1608, 2438, 2449, 2715, 2751, 3528, 3892 |
| BsaWI | WCCGGW | 3 cut(s) | 419, 724, 4091 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 380, 410, 588, 618, 2419, 2449, 3714, 3744 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 405, 1225, 1614, 3173, 3502, 3863, 3896, 4184, 4232 |
| Bse118I | RCCGGY | 1 cut(s) | 3665 |
| Bse1I | ACTGG | 9 cut(s) | 228, 576, 652, 1959, 2876, 2888, 3450, 3886, 3997 |
| Bse21I | CCTNAGG | 2 cut(s) | 345, 365 |
| Bse3DI | GCAATG | 5 cut(s) | 252, 2110, 3143, 3996, 4172 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2997 |
| BseDI | CCNNGG | 9 cut(s) | 86, 803, 1608, 2438, 2449, 2715, 2751, 3528, 3892 |
| BseJI | GATNNNNATC | 1 cut(s) | 2997 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 405, 1225, 1614, 3173, 3502, 3863, 3896, 4184, 4232 |
| BseMI | GCAATG | 5 cut(s) | 252, 2110, 3143, 3996, 4172 |
| BseMII | CTCAG | 7 cut(s) | 443, 738, 1323, 1644, 1650, 2120, 3089 |
| BseNI | ACTGG | 9 cut(s) | 228, 576, 652, 1959, 2876, 2888, 3450, 3886, 3997 |
| BseRI | GAGGAG | 2 cut(s) | 764, 3416 |
| BseSI | GKGCMC | 3 cut(s) | 1615, 3769, 3916 |
| BseYI | CCCAGC | 3 cut(s) | 2197, 3836, 3916 |
| BsgI | GTGCAG | 5 cut(s) | 3234, 3602, 3602, 3732, 3744 |
| Bsh1236I | CGCG | 2 cut(s) | 2160, 4115 |
| Bsh1285I | CGRYCG | 1 cut(s) | 83 |
| BshFI | GGCC | 2 cut(s) | 774, 1421 |
| BsiEI | CGRYCG | 1 cut(s) | 83 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1159, 1407, 2135, 3769 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3891 |
| BsiSI | CCGG | 5 cut(s) | 420, 725, 2374, 3666, 4092 |
| BslFI | GGGAC | 2 cut(s) | 1117, 1818 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 405, 1225, 1614, 3173, 3502, 3863, 3896, 4184, 4232 |
| BsmFI | GGGAC | 2 cut(s) | 1117, 1818 |
| BsmI | GAATGC | 3 cut(s) | 870, 1673, 3840 |
| BsnI | GGCC | 2 cut(s) | 774, 1421 |
| BsoBI | CYCGRG | 1 cut(s) | 3891 |
| Bsp119I | TTCGAA | 1 cut(s) | 122 |
| Bsp1286I | GDGCHC | 9 cut(s) | 71, 1159, 1407, 1615, 2135, 2351, 3769, 3916, 4063 |
| Bsp1407I | TGTACA | 1 cut(s) | 3788 |
| BspANI | GGCC | 2 cut(s) | 774, 1421 |
| BspCNI | CTCAG | 7 cut(s) | 442, 739, 1324, 1645, 1651, 2121, 3088 |
| BspFNI | CGCG | 2 cut(s) | 2160, 4115 |
| BspHI | TCATGA | 1 cut(s) | 3352 |
| BspLI | GGNNCC | 4 cut(s) | 1606, 1834, 2472, 3868 |
| BspMAI | CTGCAG | 6 cut(s) | 927, 958, 1071, 1548, 3694, 4081 |
| BspMI | ACCTGC | 3 cut(s) | 3754, 3760, 3778 |
| BspOI | GCTAGC | 1 cut(s) | 3699 |
| BspPI | GGATC | 5 cut(s) | 568, 1599, 1612, 2262, 3558 |
| BspQI | GCTCTTC | 2 cut(s) | 182, 348 |
| BspT104I | TTCGAA | 1 cut(s) | 122 |
| BsrDI | GCAATG | 5 cut(s) | 252, 2110, 3143, 3996, 4172 |
| BsrFI | RCCGGY | 1 cut(s) | 3665 |
| BsrGI | TGTACA | 1 cut(s) | 3788 |
| BsrI | ACTGG | 9 cut(s) | 228, 576, 652, 1959, 2876, 2888, 3450, 3886, 3997 |
| BssAI | RCCGGY | 1 cut(s) | 3665 |
| BssECI | CCNNGG | 9 cut(s) | 86, 803, 1608, 2438, 2449, 2715, 2751, 3528, 3892 |
| BssNI | GRCGYC | 1 cut(s) | 149 |
| BssSI | CACGAG | 1 cut(s) | 1868 |
| BssT1I | CCWWGG | 1 cut(s) | 2438 |
| Bst2BI | CACGAG | 1 cut(s) | 1868 |
| Bst6I | CTCTTC | 7 cut(s) | 20, 182, 348, 773, 2704, 3816, 4050 |
| BstACI | GRCGYC | 1 cut(s) | 149 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3569 |
| BstAUI | TGTACA | 1 cut(s) | 3788 |
| BstBAI | YACGTR | 2 cut(s) | 2183, 3764 |
| BstBI | TTCGAA | 1 cut(s) | 122 |
| BstC8I | GCNNGC | 8 cut(s) | 21, 71, 927, 1005, 3682, 3697, 3759, 3825 |
| BstDSI | CCRYGG | 2 cut(s) | 803, 2751 |
| BstEII | GGTNACC | 1 cut(s) | 1954 |
| BstFNI | CGCG | 2 cut(s) | 2160, 4115 |
| BstH2I | RGCGCY | 1 cut(s) | 3373 |
| BstHHI | GCGC | 3 cut(s) | 513, 3372, 3757 |
| BstMCI | CGRYCG | 1 cut(s) | 83 |
| BstNSI | RCATGY | 3 cut(s) | 1827, 3248, 4242 |
| BstPI | GGTNACC | 1 cut(s) | 1954 |
| BstSFI | CTRYAG | 9 cut(s) | 923, 954, 1067, 1544, 1818, 2234, 3657, 3690, 4077 |
| BstSLI | GKGCMC | 3 cut(s) | 1615, 3769, 3916 |
| BstUI | CGCG | 2 cut(s) | 2160, 4115 |
| BstV2I | GAAGAC | 3 cut(s) | 14, 1085, 4088 |
| BstX2I | RGATCY | 6 cut(s) | 844, 1522, 1604, 1705, 2254, 3550 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2669, 3201 |
| BstYI | RGATCY | 6 cut(s) | 844, 1522, 1604, 1705, 2254, 3550 |
| Bsu36I | CCTNAGG | 2 cut(s) | 345, 365 |
| BsuI | GTATCC | 2 cut(s) | 847, 2902 |
| BsuRI | GGCC | 2 cut(s) | 774, 1421 |
| BtgI | CCRYGG | 2 cut(s) | 803, 2751 |
| BtsI | GCAGTG | 5 cut(s) | 1076, 1541, 1953, 2385, 2739 |
| BveI | ACCTGC | 3 cut(s) | 3754, 3760, 3778 |
| Cac8I | GCNNGC | 8 cut(s) | 21, 71, 927, 1005, 3682, 3697, 3759, 3825 |
| CaiI | CAGNNNCTG | 3 cut(s) | 3139, 3373, 3616 |
| CciI | TCATGA | 1 cut(s) | 3352 |
| CfoI | GCGC | 3 cut(s) | 513, 3372, 3757 |
| Cfr10I | RCCGGY | 1 cut(s) | 3665 |
| Cfr13I | GGNCC | 3 cut(s) | 1216, 1832, 2471 |
| CseI | GACGC | 3 cut(s) | 138, 1520, 4275 |
| CsiI | ACCWGGT | 2 cut(s) | 3501, 4156 |
| Csp6I | GTAC | 6 cut(s) | 1185, 2802, 2957, 3216, 3789, 4253 |
| CviQI | GTAC | 6 cut(s) | 1185, 2802, 2957, 3216, 3789, 4253 |
| DraI | TTTAAA | 2 cut(s) | 1173, 4191 |
| EaeI | YGGCCR | 2 cut(s) | 772, 1419 |
| Eam1104I | CTCTTC | 7 cut(s) | 20, 182, 348, 773, 2704, 3816, 4050 |
| EarI | CTCTTC | 7 cut(s) | 20, 182, 348, 773, 2704, 3816, 4050 |
| EciI | GGCGGA | 1 cut(s) | 6 |
| Ecl136II | GAGCTC | 1 cut(s) | 2133 |
| Eco130I | CCWWGG | 1 cut(s) | 2438 |
| Eco24I | GRGCYC | 4 cut(s) | 71, 2135, 2351, 4063 |
| Eco32I | GATATC | 1 cut(s) | 939 |
| Eco47I | GGWCC | 3 cut(s) | 1216, 1832, 2471 |
| Eco53kI | GAGCTC | 1 cut(s) | 2133 |
| Eco72I | CACGTG | 1 cut(s) | 3764 |
| Eco81I | CCTNAGG | 2 cut(s) | 345, 365 |
| Eco88I | CYCGRG | 1 cut(s) | 3891 |
| Eco91I | GGTNACC | 1 cut(s) | 1954 |
| EcoICRI | GAGCTC | 1 cut(s) | 2133 |
| EcoO65I | GGTNACC | 1 cut(s) | 1954 |
| EcoRI | GAATTC | 3 cut(s) | 1293, 1804, 2369 |
| EcoRV | GATATC | 1 cut(s) | 939 |
| EcoT14I | CCWWGG | 1 cut(s) | 2438 |
| EcoT22I | ATGCAT | 1 cut(s) | 3226 |
| EcoT38I | GRGCYC | 4 cut(s) | 71, 2135, 2351, 4063 |
| ErhI | CCWWGG | 1 cut(s) | 2438 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 981, 1013, 1070, 1102, 1906, 1938 |
| FaqI | GGGAC | 2 cut(s) | 1117, 1818 |
| FauI | CCCGC | 3 cut(s) | 78, 324, 2165 |
| FauNDI | CATATG | 3 cut(s) | 3085, 3258, 3265 |
| FblI | GTMKAC | 2 cut(s) | 107, 2233 |
| FriOI | GRGCYC | 4 cut(s) | 71, 2135, 2351, 4063 |
| FspBI | CTAG | 6 cut(s) | 1394, 2652, 2850, 3171, 3696, 4215 |
| GlaI | GCGC | 3 cut(s) | 512, 3371, 3756 |
| GsaI | CCCAGC | 3 cut(s) | 2201, 3840, 3920 |
| GsuI | CTGGAG | 5 cut(s) | 594, 1779, 3467, 3597, 3716 |
| HaeII | RGCGCY | 1 cut(s) | 3373 |
| HaeIII | GGCC | 2 cut(s) | 774, 1421 |
| HapII | CCGG | 5 cut(s) | 420, 725, 2374, 3666, 4092 |
| HgaI | GACGC | 3 cut(s) | 138, 1520, 4275 |
| HhaI | GCGC | 3 cut(s) | 513, 3372, 3757 |
| Hin1I | GRCGYC | 1 cut(s) | 149 |
| Hin6I | GCGC | 3 cut(s) | 511, 3370, 3755 |
| HinP1I | GCGC | 3 cut(s) | 511, 3370, 3755 |
| HincII | GTYRAC | 4 cut(s) | 108, 982, 1699, 2659 |
| HindII | GTYRAC | 4 cut(s) | 108, 982, 1699, 2659 |
| HpaI | GTTAAC | 1 cut(s) | 1699 |
| HpaII | CCGG | 5 cut(s) | 420, 725, 2374, 3666, 4092 |
| HphI | GGTGA | 5 cut(s) | 534, 2559, 2718, 3914, 4055 |
| Hpy99I | CGWCG | 4 cut(s) | 109, 154, 157, 3426 |
| HpyCH4IV | ACGT | 7 cut(s) | 1510, 1971, 2182, 2260, 2919, 3763, 4275 |
| HpySE526I | ACGT | 7 cut(s) | 1510, 1971, 2182, 2260, 2919, 3763, 4275 |
| Hsp92I | GRCGYC | 1 cut(s) | 149 |
| HspAI | GCGC | 3 cut(s) | 511, 3370, 3755 |
| KspAI | GTTAAC | 1 cut(s) | 1699 |
| LguI | GCTCTTC | 2 cut(s) | 182, 348 |
| LmnI | GCTCC | 5 cut(s) | 163, 596, 2737, 3925, 4228 |
| LweI | GCATC | 9 cut(s) | 51, 1105, 2645, 2749, 2830, 3261, 3478, 3572, 3581 |
| MabI | ACCWGGT | 2 cut(s) | 3501, 4156 |
| MaeI | CTAG | 6 cut(s) | 1394, 2652, 2850, 3171, 3696, 4215 |
| MaeII | ACGT | 7 cut(s) | 1510, 1971, 2182, 2260, 2919, 3763, 4275 |
| MfeI | CAATTG | 5 cut(s) | 301, 1586, 2901, 3711, 4202 |
| MflI | RGATCY | 6 cut(s) | 844, 1522, 1604, 1705, 2254, 3550 |
| MhlI | GDGCHC | 9 cut(s) | 71, 1159, 1407, 1615, 2135, 2351, 3769, 3916, 4063 |
| MlsI | TGGCCA | 1 cut(s) | 774 |
| MluNI | TGGCCA | 1 cut(s) | 774 |
| MlyI | GAGTC | 9 cut(s) | 4, 404, 790, 1130, 1846, 2132, 2312, 2564, 3802 |
| MmeI | TCCRAC | 6 cut(s) | 1461, 1644, 1880, 3955, 4049, 4098 |
| Mox20I | TGGCCA | 1 cut(s) | 774 |
| Mph1103I | ATGCAT | 1 cut(s) | 3226 |
| MscI | TGGCCA | 1 cut(s) | 774 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1173, 1269, 1872 |
| Msp20I | TGGCCA | 1 cut(s) | 774 |
| MspA1I | CMGCKG | 2 cut(s) | 73, 3616 |
| MspI | CCGG | 5 cut(s) | 420, 725, 2374, 3666, 4092 |
| MssI | GTTTAAAC | 1 cut(s) | 4191 |
| MunI | CAATTG | 5 cut(s) | 301, 1586, 2901, 3711, 4202 |
| Mva1269I | GAATGC | 3 cut(s) | 870, 1673, 3840 |
| MvnI | CGCG | 2 cut(s) | 2160, 4115 |
| NciI | CCSGG | 1 cut(s) | 2375 |
| NdeI | CATATG | 3 cut(s) | 3085, 3258, 3265 |
| NheI | GCTAGC | 1 cut(s) | 3695 |
| NlaIV | GGNNCC | 4 cut(s) | 1606, 1834, 2472, 3868 |
| NmeAIII | GCCGAG | 2 cut(s) | 111, 1782 |
| NmuCI | GTSAC | 8 cut(s) | 1948, 2164, 2380, 2743, 3497, 3969, 3999, 4196 |
| NsiI | ATGCAT | 1 cut(s) | 3226 |
| NspI | RCATGY | 3 cut(s) | 1827, 3248, 4242 |
| NspV | TTCGAA | 1 cut(s) | 122 |
| OliI | CACNNNNGTG | 1 cut(s) | 1872 |
| PagI | TCATGA | 1 cut(s) | 3352 |
| PaqCI | CACCTGC | 3 cut(s) | 3754, 3760, 3778 |
| PciI | ACATGT | 1 cut(s) | 4238 |
| PciSI | GCTCTTC | 2 cut(s) | 182, 348 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 89, 110, 119, 152 |
| PctI | GAATGC | 3 cut(s) | 870, 1673, 3840 |
| PfeI | GAWTC | 9 cut(s) | 539, 629, 743, 992, 1246, 2455, 2564, 3520, 3885 |
| PflFI | GACNNNGTC | 1 cut(s) | 112 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 405 |
| PfoI | TCCNGGA | 1 cut(s) | 580 |
| PleI | GAGTC | 9 cut(s) | 4, 403, 789, 1129, 1846, 2131, 2311, 2563, 3802 |
| PmaCI | CACGTG | 1 cut(s) | 3764 |
| PmeI | GTTTAAAC | 1 cut(s) | 4191 |
| PmlI | CACGTG | 1 cut(s) | 3764 |
| PpsI | GAGTC | 9 cut(s) | 4, 403, 789, 1129, 1846, 2131, 2311, 2563, 3802 |
| Ppu21I | YACGTR | 2 cut(s) | 2183, 3764 |
| PscI | ACATGT | 1 cut(s) | 4238 |
| PshBI | ATTAAT | 1 cut(s) | 1446 |
| PsiI | TTATAA | 3 cut(s) | 231, 3509, 4053 |
| Psp124BI | GAGCTC | 1 cut(s) | 2135 |
| PspCI | CACGTG | 1 cut(s) | 3764 |
| PspEI | GGTNACC | 1 cut(s) | 1954 |
| PspFI | CCCAGC | 3 cut(s) | 2197, 3836, 3916 |
| PspN4I | GGNNCC | 4 cut(s) | 1606, 1834, 2472, 3868 |
| PspPI | GGNCC | 3 cut(s) | 1216, 1832, 2471 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2904, 2936 |
| PstI | CTGCAG | 6 cut(s) | 927, 958, 1071, 1548, 3694, 4081 |
| PstNI | CAGNNNCTG | 3 cut(s) | 3139, 3373, 3616 |
| PsuI | RGATCY | 6 cut(s) | 844, 1522, 1604, 1705, 2254, 3550 |
| PsyI | GACNNNGTC | 1 cut(s) | 112 |
| PvuII | CAGCTG | 1 cut(s) | 3616 |
| RsaI | GTAC | 6 cut(s) | 1186, 2803, 2958, 3217, 3790, 4254 |
| RsaNI | GTAC | 6 cut(s) | 1185, 2802, 2957, 3216, 3789, 4253 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1173, 1269, 1872 |
| SacI | GAGCTC | 1 cut(s) | 2135 |
| SalI | GTCGAC | 1 cut(s) | 106 |
| SapI | GCTCTTC | 2 cut(s) | 182, 348 |
| Sau96I | GGNCC | 3 cut(s) | 1216, 1832, 2471 |
| SchI | GAGTC | 9 cut(s) | 4, 404, 790, 1130, 1846, 2132, 2312, 2564, 3802 |
| SduI | GDGCHC | 9 cut(s) | 71, 1159, 1407, 1615, 2135, 2351, 3769, 3916, 4063 |
| SexAI | ACCWGGT | 2 cut(s) | 3501, 4156 |
| SfaNI | GCATC | 9 cut(s) | 51, 1105, 2645, 2749, 2830, 3261, 3478, 3572, 3581 |
| SfcI | CTRYAG | 9 cut(s) | 923, 954, 1067, 1544, 1818, 2234, 3657, 3690, 4077 |
| SfuI | TTCGAA | 1 cut(s) | 122 |
| SinI | GGWCC | 3 cut(s) | 1216, 1832, 2471 |
| SmiI | ATTTAAAT | 1 cut(s) | 1173 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1173, 1269, 1872 |
| SmlI | CTYRAG | 8 cut(s) | 968, 1472, 1526, 1535, 2120, 2423, 2552, 3005 |
| SmoI | CTYRAG | 8 cut(s) | 968, 1472, 1526, 1535, 2120, 2423, 2552, 3005 |
| SpeI | ACTAGT | 1 cut(s) | 3170 |
| SspI | AATATT | 1 cut(s) | 2392 |
| SspMI | CTAG | 6 cut(s) | 1394, 2652, 2850, 3171, 3696, 4215 |
| SstI | GAGCTC | 1 cut(s) | 2135 |
| StyI | CCWWGG | 1 cut(s) | 2438 |
| SwaI | ATTTAAAT | 1 cut(s) | 1173 |
| TaiI | ACGT | 7 cut(s) | 1513, 1974, 2185, 2263, 2922, 3766, 4278 |
| TaqI | TCGA | 5 cut(s) | 59, 107, 122, 1977, 3566 |
| TatI | WGTACW | 2 cut(s) | 3788, 4252 |
| TauI | GCSGC | 1 cut(s) | 79 |
| TfiI | GAWTC | 9 cut(s) | 539, 629, 743, 992, 1246, 2455, 2564, 3520, 3885 |
| TseFI | GTSAC | 8 cut(s) | 1948, 2164, 2380, 2743, 3497, 3969, 3999, 4196 |
| Tsp45I | GTSAC | 8 cut(s) | 1948, 2164, 2380, 2743, 3497, 3969, 3999, 4196 |
| TspGWI | ACGGA | 4 cut(s) | 454, 683, 820, 3485 |
| Tth111I | GACNNNGTC | 1 cut(s) | 112 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 405 |
| VneI | GTGCAC | 1 cut(s) | 3765 |
| VpaK11BI | GGWCC | 3 cut(s) | 1216, 1832, 2471 |
| VspI | ATTAAT | 1 cut(s) | 1446 |
| XapI | RAATTY | 9 cut(s) | 1293, 1804, 2369, 2596, 2883, 3033, 3417, 3461, 4180 |
| XbaI | TCTAGA | 1 cut(s) | 1393 |
| XceI | RCATGY | 3 cut(s) | 1827, 3248, 4242 |
| XmiI | GTMKAC | 2 cut(s) | 107, 2233 |
| XspI | CTAG | 6 cut(s) | 1394, 2652, 2850, 3171, 3696, 4215 |
| Zsp2I | ATGCAT | 1 cut(s) | 3226 |