Rh5CG416900

helicase protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
56872363 .. 56888939
16577 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG416900.1

Sequence Viewer

Length: 5148 bp
ATGGTTTTCTTTTCTTATAGTTTGGTTCAATTCAGGTGCTGTGATGGAAAAGGATGCAAGAGAAGCTATCATCTTTCATGTCTAGATCCTCCTATGAATGCTGCTCCTATTGGAGTTTGGCACTGTTCTGTGTGTGTTAAGAAAAAGATAGAATCTGGTATACATTCCGTGTCAGATGGACAGGAGTCACTCGGGAATGCTAGACAAGTGGAGGTATCAGATGCTGATGATTTTTCCAGGTTTATAGAGTACTGGGTTCCTGTAGAGATATCGAATGTTCAGCGAGAGCTATACTGTGAAAAGCTACTGTTAAACCCCTCATTACTTCAGTCATCTTCAACAAAAGATCTTGTTGGAGCACTCCACGATCTACTTAGATCTACCCGAAAGTGCTGTGATCACCCTTACATTGAGGAAGCATCTTTACAAGAGAAGGTTATGGAATTTGAAGGCCTTCAAGCAATTGACAGTTTCGAAGTAAAAAAGAAAGCAATGTTGGATGCAGGAATAAAAGCTAGTGGCAAGCTTCACATTCTTGACATGATGCTTATGGAGATAAAGAATCGAGGTTTAAGAGTGCTAATCCTATTTCAGTCAATAGGTGGTCTGGGAATTTGTATAGGAGATATTTTGGATGATTTCCTGCGTCAAAGGTATGGTGAAGACTCTTATGAACGGGTTGAACAGGGTGTTGTTCCCGCTAAGAAAGGTGAGGCAATGGGCAAGTTTAACAATAAGGAATGTGGTAGGTTTGTGTTTTTATTGGAGACTCGTGCCTGTCGTGCCAGCATCAAACTATCGTCAGTTGATACTATTATTATATATGGTAGTGACTGGAACCCAGTGAATGATGTAAGAGCCTTGCAAAAGATATCACTTGATTCACAATTTGAGCAGATAAAAGTATTTCGCTTATATTCAACTTGTACCATAGAGGAGAAGGTTCTGATTCTGGCAAAGGAGGAAAAGATTCTTGATAGCAATTTGCTTAATATTACCAAGAATAATTGTCAACTGCTACTTTCGTGGGGTGCACCTTATCAATTTGTTAAACTGAATGAGTTCCATTGCCACAATTCGCCCGCCTCTAGTGAAAGTATCTTACCCGTAGAATCACCTCTGAAAGATGTCATCCAGGAATTTGTGTCCCTACTTTCTCAGGATGCCAAAAACAATGGCTTGGGTGGTTTCTCTGTTATCTCAAAAGCTCATCAAACTGGATTCTCTGTTATCTCAAAAGCTCATCAAACTGGAGGAGGTTACAGTACGAAGAATCTGTTGTTTGGCGAATTGAAATCTCAACATATGGGTGATGGGAAACCACTTAGTTTTTGGATAAAACTGTGGGAGGGAAAGCATCCTCAGTGGAAATATTGTGTTGGTTTGTCCCAGAGGAACAGGAAAAGGGTAAAACATACTGATGAGGAGCTATCAAAGAAACCACAAGTTGAAAGTGATGAATCTGTAAAAAAACGGAAGAAGGTGGGAAATAGTAATAATGATTCGGCCAACTTAAAGCCTGGATTTGAGGGAAAATCAATCCCTGTATCTGAGGATGGAGCTTCTGTAACTCCAGCAGACAATGTGCCTCACTCTTCTTCTAGGTTATCTGCATTTGTAAATAATATAATTGGTGAAAACCGTGTTTGTACTTCACATAATTTTGCTAAAAGCACAAGACCAGAAAGTGACATGTTTGAATCTAAGGAGAGAAGAAAATTGCTTGATGCCCAAAAGAGTCTGCATCTTCATTTGAAGCCAGAGATATCAAAACTTTGTGGAATCCTACAACTCTCAGATCTTCACAAGGTTTGGGTTGAAAAGTTTCTTGAATATGTCATGAAGAATCACAATGTTACTAGAGAACCAGCAAACATATTGCAGGCATTTCAGATATCTCTGTGTTGGACTGTGGCTTCAATTCTGAAGCACAAAGTCGACCACAAAGAATCTTTTGCACGTGCTAAGCAGCATCTTAACTTCAATTGCCAAAAGGAAGAGGCGGACCGTGTTTATTCAATGCTGCGGTGTCTGAAGAAAACGTTTCTATACCGCACAAGGAATTTTAAGGCTGCAGACCCTCCAAATTTCTCTGCACTCTCAAATAATGGTACAATTTCAAACTTGGAGGGGGTCAAATCAGGTGTTGAAGACTATCAGCTATATTTAGCAGGAAAAGATGTCTCAAAATGTATCAATGAAATTCAGAAAAAGTTCCAGAAGAAGATGAAAAAACTTGTTGAGAAGCAATCTAAAGAGAGAAGTGAACTTTTGAGATTATACGAGGAGCAAAAGGAGCAACTCGAAATGAAGCACAAAATAGAGTTGGCTGTAAATCGAATTACTTCAATGAGTGCAGATAGTTTGAGGGTCAAGGAAACTGAATTTGAAAAGGAAATTGAAGAGCATAAACACAAGGTGGACATACATTTGCAGCTTCTTGAGAAATTGCAGCTGGAAGCAAGCCTTAAGCTGAAAGAGAATGAGAACCAACGGGTAGAGGAAGTGCAAAAGTGGGTTCGTGATGAGTTGTTGAATAATTCACCTTCAAATGCACCAGCTAGACCGATTGTTGCAAATGGTGCACTTGATCCAATCACTTCTGAGGTTTTTTATAGTACTGGGAAAAACAAGGATGGCGTTTCTGGTGATAATCAAGCAAACGTTGCTACTGTGATTCCTTGTGCCAAAGAGCTGATGACTAATGGAGGCACTTCAGAAAATGGGGAGGCTCTGCTGGATGTCCCGGAAATTATCTGCTCTAGCAAAGTTGTCACCTCCGGTCTTCCTTCATTTGAAGAAAGGATTGACAAGTCTGACAAATCACCCATTTGTGATAGGGTTGTCAGACTGGAAGAGCCCATAACTGTCAGTCCACTGACTCTATCTGCTACGGAACAGAATCCTCATGGGGCTACATTAAGCATGGCTGACAGAGAGGCTCCACTGGAATTGCATGAGACCGTCAGTTCGATTCATGGGGTGCATGATGATGCGTCTGTGAACCCATGTGCATCTGAAGAACAAATCCGTGTGGCAACAGTAAACATACCAGGTAATATGGTTGAGTCGGCAGTGGATGCAACTGTCAGTTCGAATGATGCCCTACAGAATCCTCTCTCTAGGGTTCCGCCTGCAGAAATAGAAAATGGTGAAGTGCAAGTTACTGCATCTGATATTGCAACTGGGGTCAACCAGCAGAAAGGAGTTGATACTGAGTTATCGTCAGCTGCTCAATCTGTTGCAACTATAGATTCTGAGCACTCAGACCATGAAGTGGCGACCAATGAGCCTGTAGTACCATCCTCGGAGACACCAGACCGTAGTCGTCAGTTATCTTCAGCTGCTGGAATTAAAAATCAGCCAAGTAGTGAGAACCGAGTTCAAGGTACCGTCTTGGCTGCATTGACTACAGGGCAAGATGGAAATGCACACACTAGCGAAAAGCAGAATACTTGCCTACCTGTTGAAAATCTAGCGTCCCAATCTGTTGCGATCATAACATCCGATCAATCTGCTCATGAAGAGTCGGTGGCACAGTTATCTAATAGACCCGAGTTATCTTCAGCTTGTGCAATTGAAGTTCATCAAAGTATCGAAAATCAAGACAGAGGTGTTGTGTTAGCCACATCCACAGCAGTACAAGATGGAGATGCACAAGCTACTGGGAATCAGAATACATGTCAACCAGTTGAAGATCGAGTATCCCAATTAATTGCCACTGTAGAATCTGATCATGAAGGGCAGACGAATGTAGCTGTAGTACAATTGCAGCTTCCTGAGTCTGCAGCTGGTGGAATTGAAATTTGGCCAAGTAGGGTAGACCACACCTCTAACCAAGTTTCTCAGGCTCCACTGCAATTTGTTGAGAACTATTCTGTTCAATCAAATGAAACCGCTTTGCAGCCTGCACCAAGTCTTTCTTTGCATCAGCCAATGGATATACCTACTAATGGATTTGGGCTGCCTTTTTCAGACACACGGGCTACTTCTGTAACTAATAGTCGTCCTATACATGCTGCTCCCCAGGGGACACTAAGGATGCCTCAGCATTCGTACCCTGATCCACTTCAAAATGAATTGGAAAGATTAAATAAAGATATGGAACAAAACATTAAGTCTCATGAAGATAAGAAGCTGCTTCTGAAATCTGATTATGACAAGAAAATAGAGGAGGCTGTTGCTGAACTTCGTCGGCAATGTGAGACTAAACTTCAGGAGGAAGAAGCCGAATTTCGGCATATACAGAAGGAACTAGATGCAAATTACAATAAAGTTTTAATGAATAAGATTTTGGCTGAGGCTTTCAGGTCTAAATGCATGGATCTTAAGGCATCAAGTGCATGTGGAGTGCAGCAAGATGGAAATTCTAGTTTTGTCCAGCAGCTGGTTCAGTTATCTATGCAGCAAAATGCACATAGGCCTTCTTCAGTTTCTAGTTCATCGTCAACCAGCGTTCCTGCAGCTAGCCTGCAGACTTCTATTGCACCCTTACCCAGCCAGCAGGCTTCTATTGCTCCAATACCCAGCCTGCAGACTTCTAGTGCACCCTTACCCAGCCTGCAAACAACCCTACCTGCATCTGCGATTGCACCTAGTCAGCATTACACAGCTCCAATCATGCAGACTGTTCCACTTTCCCCTGCTTCTCCGTCCATTCCAGCAAGACCCCCTCACATTGGTACCTTCTCTGGCTCCACAGGAATCCCCCAAGGTGGAGGTCAGATTCGTGCCCCAGCCCCACATCTCCAACCATTTAGGCCTTCAACATCCGTTACAGGCACCAGTCCTCTGTCCCAGCAAGGTGGGATGTCAACTCCCCGTTCTCATAGCAACGGCCCTGCAACATCTTCATCACTTTCTCATATGCCACAAATGCCAGCTCCCACACAACAAACTGTTCCCTCTAGTGGGGCCCAGCATGTTGAAAGTGCAGGACGTAGCTCAACTCCTCATTCTGCATCTGCGTTGAAGTTGCTTATGGATATGGAGAACCGTTCTGGTGCAATTCGATCAGGTGGTTTGTTGCCACCACTGACTTCAAGTTCATTTAATCATCCTGATCCTGCCATTGCAAGTAGTGCATCTGCCAACCCAGTAAATACAGGTGGAACCCCTGACGTAGTTTGTTTATCGGACGATGACTAA

Protein Analysis

1715

Amino Acids

187.75

Weight (kDa)

5.95

Isoelectric Point (pI)

52.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Helicase_C PF00271 178 - 286 2.4e-06 Helicase conserved C-terminal domain
MOM1 PF25029 576 - 697 5e-56 MOM1-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 4585
Acc65I GGTACC 2 cut(s) 3389, 4682
AccB1I GGYRCC 3 cut(s) 3389, 4682, 4781
AccB7I CCANNNNNTGG 2 cut(s) 3277, 4387
AccI GTMKAC 3 cut(s) 160, 1938, 3822
AciI CCGC 7 cut(s) 699, 1083, 2003, 2026, 2053, 3131, 3897
AclI AACGTT 2 cut(s) 2042, 2664
AclWI GGATC 5 cut(s) 80, 2585, 4058, 4332, 5057
AcoI YGGCCR 2 cut(s) 1506, 3809
AcuI CTGAAG 9 cut(s) 311, 1946, 2054, 2700, 3039, 3324, 3549, 4199, 4413
AcvI CACGTG 1 cut(s) 1961
AdeI CACNNNGTG 1 cut(s) 2419
AfiI CCNNNNNNNGG 8 cut(s) 3277, 3953, 4236, 4387, 4679, 4715, 4910, 4911
AflII CTTAAG 2 cut(s) 2468, 4328
AflIII ACRYGT 2 cut(s) 1692, 3680
AjnI CCWGG 5 cut(s) 236, 1134, 1519, 3052, 4026
AjuI GAANNNNNNNTTGG 6 cut(s) 479, 511, 3790, 3822, 4277, 4309
Alw21I GWGCWC 5 cut(s) 361, 1036, 2587, 3264, 4549
Alw26I GTCTC 6 cut(s) 761, 2188, 2954, 3305, 4125, 4199
Alw44I GTGCAC 3 cut(s) 1032, 2583, 4545
AlwI GGATC 5 cut(s) 80, 2585, 4058, 4332, 5057
AlwNI CAGNNNCTG 4 cut(s) 39, 224, 3347, 4387
Ama87I CYCGRG 2 cut(s) 191, 3554
AoxI GGCC 7 cut(s) 451, 1506, 3809, 4421, 4760, 4837, 4914
ApaI GGGCCC 1 cut(s) 4918
ApaLI GTGCAC 3 cut(s) 1032, 2583, 4545
ArsI GACNNNNNNTTYG 2 cut(s) 2953, 2985
AseI ATTAAT 1 cut(s) 3713
Asp700I GAANNNNTTC 6 cut(s) 453, 969, 1061, 1824, 2213, 2344
Asp718I GGTACC 2 cut(s) 3389, 4682
AspS9I GGNCC 4 cut(s) 2005, 4838, 4914, 4915
AsuC2I CCSGG 1 cut(s) 2747
AsuII TTCGAA 2 cut(s) 474, 3095
AsuNHI GCTAGC 1 cut(s) 4466
AvaI CYCGRG 2 cut(s) 191, 3554
AvaII GGWCC 1 cut(s) 2005
BaeGI GKGCMC 5 cut(s) 1036, 2587, 4549, 4735, 4918
BaeI ACNNNNGTAYC 2 cut(s) 4666, 4699
BalI TGGCCA 1 cut(s) 3811
BanI GGYRCC 3 cut(s) 3389, 4682, 4781
BanII GRGCYC 2 cut(s) 2862, 4918
BarI GAAGNNNNNNTAC 2 cut(s) 408, 440
BauI CACGAG 1 cut(s) 771
BbrPI CACGTG 1 cut(s) 1961
BbsI GAAGAC 3 cut(s) 669, 2157, 2777
Bbv12I GWGCWC 5 cut(s) 361, 1036, 2587, 3264, 4549
BbvCI CCTCAGC 2 cut(s) 4047, 4299
BccI CCATC 9 cut(s) 38, 170, 1307, 1550, 2630, 3310, 3416, 3641, 4355
BceAI ACGGC 1 cut(s) 4852
BcgI CGANNNNNNTGC 2 cut(s) 3497, 3531
BciT130I CCWGG 5 cut(s) 238, 1136, 1521, 3054, 4028
BciVI GTATCC 1 cut(s) 3715
BclI TGATCA 2 cut(s) 397, 3733
BcnI CCSGG 1 cut(s) 2747
BcoDI GTCTC 6 cut(s) 761, 2188, 2954, 3305, 4125, 4199
BfrI CTTAAG 2 cut(s) 2468, 4328
BfuAI ACCTGC 1 cut(s) 4585
BfuI GTATCC 1 cut(s) 3715
BglII AGATCT 3 cut(s) 346, 377, 1798
BlpI GCTNAGC 1 cut(s) 1965
BmcAI AGTACT 2 cut(s) 251, 2620
Bme1390I CCNGG 6 cut(s) 238, 1136, 1521, 2747, 3054, 4028
Bme18I GGWCC 1 cut(s) 2005
BmeT110I CYCGRG 2 cut(s) 191, 3554
BmgT120I GGNCC 4 cut(s) 2005, 4838, 4914, 4915
BmrFI CCNGG 6 cut(s) 238, 1136, 1521, 2747, 3054, 4028
BmrI ACTGGG 6 cut(s) 262, 836, 2631, 3195, 3675, 5090
BmtI GCTAGC 1 cut(s) 4470
BmuI ACTGGG 6 cut(s) 262, 836, 2631, 3195, 3675, 5090
BoxI GACNNNNGTC 2 cut(s) 184, 3324
BpiI GAAGAC 3 cut(s) 669, 2157, 2777
BpmI CTGGAG 2 cut(s) 1272, 1557
Bpu10I CCTNAGC 2 cut(s) 4047, 4299
Bpu1102I GCTNAGC 1 cut(s) 1965
Bpu14I TTCGAA 2 cut(s) 474, 3095
BpuEI CTTGAG 1 cut(s) 2462
BpuMI CCSGG 1 cut(s) 2747
BsaAI YACGTR 1 cut(s) 1961
BsaI GGTCTC 1 cut(s) 2954
BsaJI CCNNGG 4 cut(s) 3306, 4026, 4027, 4711
BsaWI WCCGGW 1 cut(s) 2780
BsaXI ACNNNNNCTCC 2 cut(s) 1551, 1581
Bsc4I CCNNNNNNNGG 8 cut(s) 3277, 3953, 4236, 4387, 4679, 4715, 4910, 4911
Bse3DI GCAATG 5 cut(s) 498, 723, 1066, 4205, 5070
BseBI CCWGG 5 cut(s) 238, 1136, 1521, 3054, 4028
BseDI CCNNGG 4 cut(s) 3306, 4026, 4027, 4711
BseLI CCNNNNNNNGG 8 cut(s) 3277, 3953, 4236, 4387, 4679, 4715, 4910, 4911
BseMI GCAATG 5 cut(s) 498, 723, 1066, 4205, 5070
BseRI GAGGAG 6 cut(s) 950, 1269, 1439, 2300, 4187, 4941
BseSI GKGCMC 5 cut(s) 1036, 2587, 4549, 4735, 4918
BseYI CCCAGC 6 cut(s) 4496, 4526, 4556, 4735, 4797, 4917
BsgI GTGCAG 5 cut(s) 2079, 2376, 3894, 4373, 4953
BshFI GGCC 7 cut(s) 453, 1508, 3811, 4423, 4762, 4839, 4916
BshNI GGYRCC 3 cut(s) 3389, 4682, 4781
BsiHKAI GWGCWC 5 cut(s) 361, 1036, 2587, 3264, 4549
BsiHKCI CYCGRG 2 cut(s) 191, 3554
BsiSI CCGG 2 cut(s) 2747, 2781
BslFI GGGAC 6 cut(s) 1132, 1372, 2729, 3466, 4045, 4780
BslI CCNNNNNNNGG 8 cut(s) 3277, 3953, 4236, 4387, 4679, 4715, 4910, 4911
BsmAI GTCTC 6 cut(s) 761, 2188, 2954, 3305, 4125, 4199
BsmFI GGGAC 6 cut(s) 1132, 1372, 2729, 3466, 4045, 4780
BsmI GAATGC 3 cut(s) 103, 202, 4051
BsnI GGCC 7 cut(s) 453, 1508, 3811, 4423, 4762, 4839, 4916
Bso31I GGTCTC 1 cut(s) 2954
BsoBI CYCGRG 2 cut(s) 191, 3554
Bsp119I TTCGAA 2 cut(s) 474, 3095
Bsp120I GGGCCC 1 cut(s) 4914
Bsp1286I GDGCHC 8 cut(s) 361, 1036, 2587, 2862, 3264, 4549, 4735, 4918
Bsp1720I GCTNAGC 1 cut(s) 1965
BspACI CCGC 7 cut(s) 699, 1083, 2003, 2026, 2053, 3131, 3897
BspANI GGCC 7 cut(s) 453, 1508, 3811, 4423, 4762, 4839, 4916
BspHI TCATGA 4 cut(s) 1839, 3520, 3736, 4123
BspMAI CTGCAG 6 cut(s) 2077, 3139, 3790, 4465, 4476, 4536
BspMI ACCTGC 1 cut(s) 4585
BspOI GCTAGC 1 cut(s) 4470
BspPI GGATC 5 cut(s) 80, 2585, 4058, 4332, 5057
BspQI GCTCTTC 2 cut(s) 2397, 2850
BspT104I TTCGAA 2 cut(s) 474, 3095
BspT107I GGYRCC 3 cut(s) 3389, 4682, 4781
BspTI CTTAAG 2 cut(s) 2468, 4328
BspTNI GGTCTC 1 cut(s) 2954
BsrDI GCAATG 5 cut(s) 498, 723, 1066, 4205, 5070
BssECI CCNNGG 4 cut(s) 3306, 4026, 4027, 4711
BssNAI GTATAC 1 cut(s) 161
BssSI CACGAG 1 cut(s) 771
BssT1I CCWWGG 1 cut(s) 4711
Bst1107I GTATAC 1 cut(s) 161
Bst2BI CACGAG 1 cut(s) 771
Bst2UI CCWGG 5 cut(s) 238, 1136, 1521, 3054, 4028
Bst6I CTCTTC 5 cut(s) 1600, 1992, 2397, 2850, 3519
BstAFI CTTAAG 2 cut(s) 2468, 4328
BstAPI GCANNNNNTGC 5 cut(s) 2582, 2666, 3080, 4340, 5081
BstBAI YACGTR 1 cut(s) 1961
BstBI TTCGAA 2 cut(s) 474, 3095
BstMAI GTCTC 6 cut(s) 761, 2188, 2954, 3305, 4125, 4199
BstNI CCWGG 5 cut(s) 238, 1136, 1521, 3054, 4028
BstNSI RCATGY 5 cut(s) 1696, 3684, 4019, 4347, 4925
BstPAI GACNNNNGTC 2 cut(s) 184, 3324
BstSCI CCNGG 6 cut(s) 236, 1134, 1519, 2745, 3052, 4026
BstSLI GKGCMC 5 cut(s) 1036, 2587, 4549, 4735, 4918
BstV2I GAAGAC 3 cut(s) 669, 2157, 2777
BstX2I RGATCY 5 cut(s) 85, 346, 377, 1798, 4324
BstXI CCANNNNNNTGG 1 cut(s) 4805
BstYI RGATCY 5 cut(s) 85, 346, 377, 1798, 4324
BstZ17I GTATAC 1 cut(s) 161
BsuI GTATCC 1 cut(s) 3715
BsuRI GGCC 7 cut(s) 453, 1508, 3811, 4423, 4762, 4839, 4916
BtsI GCAGTG 2 cut(s) 3081, 3854
BtsIMutI CAGTG 9 cut(s) 121, 849, 1370, 2876, 2945, 3081, 3720, 3854, 5033
BveI ACCTGC 1 cut(s) 4585
CaiI CAGNNNCTG 4 cut(s) 39, 224, 3347, 4387
CciI TCATGA 4 cut(s) 1839, 3520, 3736, 4123
Cfr13I GGNCC 4 cut(s) 2005, 4838, 4914, 4915
CpoI CGGWCCG 1 cut(s) 2005
CseI GACGC 3 cut(s) 635, 2985, 3468
CsiI ACCWGGT 1 cut(s) 3052
CspCI CAANNNNNGTGG 2 cut(s) 2934, 2969
CspI CGGWCCG 1 cut(s) 2005
DraIII CACNNNGTG 1 cut(s) 2419
EaeI YGGCCR 2 cut(s) 1506, 3809
Eam1104I CTCTTC 5 cut(s) 1600, 1992, 2397, 2850, 3519
EarI CTCTTC 5 cut(s) 1600, 1992, 2397, 2850, 3519
EciI GGCGGA 2 cut(s) 2018, 3120
Eco130I CCWWGG 1 cut(s) 4711
Eco147I AGGCCT 3 cut(s) 453, 4423, 4762
Eco24I GRGCYC 2 cut(s) 2862, 4918
Eco31I GGTCTC 1 cut(s) 2954
Eco32I GATATC 4 cut(s) 270, 873, 1767, 1896
Eco47I GGWCC 1 cut(s) 2005
Eco57I CTGAAG 9 cut(s) 311, 1946, 2054, 2700, 3039, 3324, 3549, 4199, 4413
Eco72I CACGTG 1 cut(s) 1961
Eco88I CYCGRG 2 cut(s) 191, 3554
EcoO109I RGGNCCY 1 cut(s) 4914
EcoRII CCWGG 5 cut(s) 236, 1134, 1519, 3052, 4026
EcoRV GATATC 4 cut(s) 270, 873, 1767, 1896
EcoT14I CCWWGG 1 cut(s) 4711
EcoT22I ATGCAT 1 cut(s) 4322
EcoT38I GRGCYC 2 cut(s) 2862, 4918
ErhI CCWWGG 1 cut(s) 4711
FalI AAGNNNNNCTT 4 cut(s) 2451, 2483, 3907, 3939
FaqI GGGAC 6 cut(s) 1132, 1372, 2729, 3466, 4045, 4780
FauI CCCGC 2 cut(s) 706, 1090
FauNDI CATATG 2 cut(s) 1305, 4866
FbaI TGATCA 2 cut(s) 397, 3733
FblI GTMKAC 3 cut(s) 160, 1938, 3822
FriOI GRGCYC 2 cut(s) 2862, 4918
GsaI CCCAGC 6 cut(s) 4500, 4530, 4560, 4739, 4801, 4921
GsuI CTGGAG 2 cut(s) 1272, 1557
HaeIII GGCC 7 cut(s) 453, 1508, 3811, 4423, 4762, 4839, 4916
HapII CCGG 2 cut(s) 2747, 2781
HgaI GACGC 3 cut(s) 635, 2985, 3468
HincII GTYRAC 6 cut(s) 1013, 1939, 3193, 3686, 4449, 4815
HindII GTYRAC 6 cut(s) 1013, 1939, 3193, 3686, 4449, 4815
HindIII AAGCTT 1 cut(s) 524
HpaII CCGG 2 cut(s) 2747, 2781
Hpy99I CGWCG 1 cut(s) 4197
HpyCH4IV ACGT 5 cut(s) 1960, 2042, 2664, 4939, 5121
HpySE526I ACGT 5 cut(s) 1960, 2042, 2664, 4939, 5121
KpnI GGTACC 2 cut(s) 3393, 4686
Ksp22I TGATCA 2 cut(s) 397, 3733
LguI GCTCTTC 2 cut(s) 2397, 2850
MabI ACCWGGT 1 cut(s) 3052
MaeII ACGT 5 cut(s) 1960, 2042, 2664, 4939, 5121
MfeI CAATTG 4 cut(s) 462, 1984, 3576, 3767
MflI RGATCY 5 cut(s) 85, 346, 377, 1798, 4324
MhlI GDGCHC 8 cut(s) 361, 1036, 2587, 2862, 3264, 4549, 4735, 4918
MlsI TGGCCA 1 cut(s) 3811
MluNI TGGCCA 1 cut(s) 3811
MlyI GAGTC 8 cut(s) 194, 659, 763, 1747, 2875, 3077, 3536, 3791
MmeI TCCRAC 4 cut(s) 334, 477, 1886, 4774
Mox20I TGGCCA 1 cut(s) 3811
Mph1103I ATGCAT 1 cut(s) 4322
MroXI GAANNNNTTC 6 cut(s) 453, 969, 1061, 1824, 2213, 2344
MscI TGGCCA 1 cut(s) 3811
MslI CAYNNNNRTG 3 cut(s) 1308, 1419, 2991
Msp20I TGGCCA 1 cut(s) 3811
MspA1I CMGCKG 5 cut(s) 2455, 3230, 3344, 3791, 4387
MspCI CTTAAG 2 cut(s) 2468, 4328
MspI CCGG 2 cut(s) 2747, 2781
MspR9I CCNGG 6 cut(s) 238, 1136, 1521, 2747, 3054, 4028
MunI CAATTG 4 cut(s) 462, 1984, 3576, 3767
Mva1269I GAATGC 3 cut(s) 103, 202, 4051
MvaI CCWGG 5 cut(s) 238, 1136, 1521, 3054, 4028
NciI CCSGG 1 cut(s) 2747
NdeI CATATG 2 cut(s) 1305, 4866
NheI GCTAGC 1 cut(s) 4466
NmuCI GTSAC 4 cut(s) 186, 830, 1688, 2773
NsiI ATGCAT 1 cut(s) 4322
NspI RCATGY 5 cut(s) 1696, 3684, 4019, 4347, 4925
NspV TTCGAA 2 cut(s) 474, 3095
PagI TCATGA 4 cut(s) 1839, 3520, 3736, 4123
PasI CCCWGGG 1 cut(s) 4027
PceI AGGCCT 3 cut(s) 453, 4423, 4762
PciI ACATGT 2 cut(s) 1692, 3680
PciSI GCTCTTC 2 cut(s) 2397, 2850
PcsI WCGNNNNNNNCGW 1 cut(s) 778
PctI GAATGC 3 cut(s) 103, 202, 4051
PdmI GAANNNNTTC 6 cut(s) 453, 969, 1061, 1824, 2213, 2344
PflMI CCANNNNNTGG 2 cut(s) 3277, 4387
PfoI TCCNGGA 2 cut(s) 1134, 2745
PleI GAGTC 8 cut(s) 193, 659, 763, 1746, 2875, 3076, 3535, 3790
PmaCI CACGTG 1 cut(s) 1961
PmlI CACGTG 1 cut(s) 1961
PpsI GAGTC 8 cut(s) 193, 659, 763, 1746, 2875, 3076, 3535, 3790
Ppu21I YACGTR 1 cut(s) 1961
PscI ACATGT 2 cut(s) 1692, 3680
PshAI GACNNNNGTC 2 cut(s) 184, 3324
PshBI ATTAAT 1 cut(s) 3713
Psp1406I AACGTT 2 cut(s) 2042, 2664
Psp6I CCWGG 5 cut(s) 236, 1134, 1519, 3052, 4026
PspCI CACGTG 1 cut(s) 1961
PspFI CCCAGC 6 cut(s) 4496, 4526, 4556, 4735, 4797, 4917
PspGI CCWGG 5 cut(s) 236, 1134, 1519, 3052, 4026
PspOMI GGGCCC 1 cut(s) 4914
PspPI GGNCC 4 cut(s) 2005, 4838, 4914, 4915
PstI CTGCAG 6 cut(s) 2077, 3139, 3790, 4465, 4476, 4536
PstNI CAGNNNCTG 4 cut(s) 39, 224, 3347, 4387
PsuI RGATCY 5 cut(s) 85, 346, 377, 1798, 4324
PvuII CAGCTG 5 cut(s) 2455, 3230, 3344, 3791, 4387
RseI CAYNNNNRTG 3 cut(s) 1308, 1419, 2991
Rsr2I CGGWCCG 1 cut(s) 2005
RsrII CGGWCCG 1 cut(s) 2005
SalI GTCGAC 1 cut(s) 1937
SapI GCTCTTC 2 cut(s) 2397, 2850
Sau96I GGNCC 4 cut(s) 2005, 4838, 4914, 4915
ScaI AGTACT 2 cut(s) 251, 2620
SchI GAGTC 8 cut(s) 194, 659, 763, 1747, 2875, 3077, 3536, 3791
ScrFI CCNGG 6 cut(s) 238, 1136, 1521, 2747, 3054, 4028
SduI GDGCHC 8 cut(s) 361, 1036, 2587, 2862, 3264, 4549, 4735, 4918
SexAI ACCWGGT 1 cut(s) 3052
SfuI TTCGAA 2 cut(s) 474, 3095
SinI GGWCC 1 cut(s) 2005
SmiMI CAYNNNNRTG 3 cut(s) 1308, 1419, 2991
SmlI CTYRAG 3 cut(s) 2441, 2468, 4328
SmoI CTYRAG 3 cut(s) 2441, 2468, 4328
SseBI AGGCCT 3 cut(s) 453, 4423, 4762
SsiI CCGC 7 cut(s) 699, 1083, 2003, 2026, 2053, 3131, 3897
SspI AATATT 2 cut(s) 994, 1373
StuI AGGCCT 3 cut(s) 453, 4423, 4762
StyD4I CCNGG 6 cut(s) 236, 1134, 1519, 2745, 3052, 4026
StyI CCWWGG 1 cut(s) 4711
TaiI ACGT 5 cut(s) 1963, 2045, 2667, 4942, 5124
TaqII GACCGA 1 cut(s) 2581
TatI WGTACW 5 cut(s) 249, 1649, 2618, 3640, 3763
TscAI CASTG 9 cut(s) 128, 849, 1370, 2883, 2952, 3081, 3727, 3861, 5040
TseFI GTSAC 4 cut(s) 186, 830, 1688, 2773
Tsp45I GTSAC 4 cut(s) 186, 830, 1688, 2773
TspGWI ACGGA 6 cut(s) 157, 1489, 2909, 3020, 4641, 4762
TspRI CASTG 9 cut(s) 128, 849, 1370, 2883, 2952, 3081, 3727, 3861, 5040
Van91I CCANNNNNTGG 2 cut(s) 3277, 4387
Vha464I CTTAAG 2 cut(s) 2468, 4328
VneI GTGCAC 3 cut(s) 1032, 2583, 4545
VpaK11BI GGWCC 1 cut(s) 2005
VspI ATTAAT 1 cut(s) 3713
XbaI TCTAGA 1 cut(s) 82
XceI RCATGY 5 cut(s) 1696, 3684, 4019, 4347, 4925
XcmI CCANNNNNNNNNTGG 1 cut(s) 1329
XmiI GTMKAC 3 cut(s) 160, 1938, 3822
XmnI GAANNNNTTC 6 cut(s) 453, 969, 1061, 1824, 2213, 2344
ZrmI AGTACT 2 cut(s) 251, 2620
Zsp2I ATGCAT 1 cut(s) 4322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.