Mediator of RNA polymerase II transcription subunit 15a-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 436, 1762 |
| Acc36I | ACCTGC | 5 cut(s) | 436, 610, 676, 793, 1762 |
| AccB1I | GGYRCC | 2 cut(s) | 424, 3515 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2966 |
| AccBSI | CCGCTC | 1 cut(s) | 3458 |
| AccI | GTMKAC | 3 cut(s) | 964, 1201, 3055 |
| AccIII | TCCGGA | 1 cut(s) | 3393 |
| AciI | CCGC | 3 cut(s) | 330, 583, 3458 |
| AclWI | GGATC | 6 cut(s) | 98, 238, 635, 752, 978, 1604 |
| AcoI | YGGCCR | 1 cut(s) | 1504 |
| AcsI | RAATTY | 7 cut(s) | 50, 146, 505, 1560, 1709, 2068, 2547 |
| AcuI | CTGAAG | 9 cut(s) | 120, 435, 512, 1323, 2112, 2282, 2763, 3254, 3484 |
| AdeI | CACNNNGTG | 1 cut(s) | 2663 |
| AfaI | GTAC | 7 cut(s) | 88, 397, 738, 1143, 1278, 2938, 3512 |
| AfeI | AGCGCT | 1 cut(s) | 3538 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 120, 278, 1090, 1307, 1472, 2543, 2585, 2966 |
| AflIII | ACRYGT | 3 cut(s) | 398, 700, 817 |
| AjnI | CCWGG | 3 cut(s) | 2118, 2959, 3518 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 903, 935, 2889, 2921 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2019, 2051 |
| Alw21I | GWGCWC | 4 cut(s) | 1292, 1545, 2668, 3305 |
| Alw26I | GTCTC | 2 cut(s) | 345, 3134 |
| AlwI | GGATC | 6 cut(s) | 98, 238, 635, 752, 978, 1604 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 320 |
| Ama87I | CYCGRG | 2 cut(s) | 2225, 3453 |
| Aor13HI | TCCGGA | 1 cut(s) | 3393 |
| Aor51HI | AGCGCT | 1 cut(s) | 3538 |
| AoxI | GGCC | 2 cut(s) | 1504, 3216 |
| ApoI | RAATTY | 7 cut(s) | 50, 146, 505, 1560, 1709, 2068, 2547 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3356, 3388 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1855, 2551 |
| AspLEI | GCGC | 3 cut(s) | 278, 1096, 3539 |
| AspS9I | GGNCC | 3 cut(s) | 281, 435, 2822 |
| AsuC2I | CCSGG | 1 cut(s) | 273 |
| AsuHPI | GGTGA | 9 cut(s) | 23, 1966, 2008, 2363, 2370, 2526, 3076, 3191, 3472 |
| AsuII | TTCGAA | 1 cut(s) | 2311 |
| AsuNHI | GCTAGC | 1 cut(s) | 1757 |
| AvaI | CYCGRG | 2 cut(s) | 2225, 3453 |
| AvaII | GGWCC | 3 cut(s) | 281, 435, 2822 |
| BaeGI | GKGCMC | 1 cut(s) | 3454 |
| BalI | TGGCCA | 1 cut(s) | 1506 |
| BanI | GGYRCC | 2 cut(s) | 424, 3515 |
| BanII | GRGCYC | 4 cut(s) | 893, 1292, 1545, 2959 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 79, 111 |
| BbsI | GAAGAC | 2 cut(s) | 1053, 3531 |
| Bbv12I | GWGCWC | 4 cut(s) | 1292, 1545, 2668, 3305 |
| BbvCI | CCTCAGC | 1 cut(s) | 3160 |
| BccI | CCATC | 8 cut(s) | 211, 663, 718, 1192, 1841, 1951, 2684, 2687 |
| BceAI | ACGGC | 2 cut(s) | 3065, 3529 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1435, 1469 |
| BciT130I | CCWGG | 3 cut(s) | 2120, 2961, 3520 |
| BciVI | GTATCC | 1 cut(s) | 516 |
| BclI | TGATCA | 1 cut(s) | 3346 |
| BcnI | CCSGG | 1 cut(s) | 273 |
| BcoDI | GTCTC | 2 cut(s) | 345, 3134 |
| BfaI | CTAG | 5 cut(s) | 1758, 2148, 3042, 3122, 3228 |
| BfmI | CTRYAG | 4 cut(s) | 1205, 1841, 3030, 3540 |
| BfoI | RGCGCY | 2 cut(s) | 279, 3540 |
| BfuAI | ACCTGC | 5 cut(s) | 436, 610, 676, 793, 1762 |
| BfuI | GTATCC | 1 cut(s) | 516 |
| BglII | AGATCT | 2 cut(s) | 2840, 3352 |
| BlpI | GCTNAGC | 1 cut(s) | 2709 |
| Bme1390I | CCNGG | 4 cut(s) | 273, 2120, 2961, 3520 |
| Bme18I | GGWCC | 3 cut(s) | 281, 435, 2822 |
| BmeT110I | CYCGRG | 2 cut(s) | 2225, 3453 |
| BmgT120I | GGNCC | 3 cut(s) | 281, 435, 2822 |
| BmiI | GGNNCC | 5 cut(s) | 426, 2562, 2958, 3398, 3517 |
| BmrFI | CCNGG | 4 cut(s) | 273, 2120, 2961, 3520 |
| BmsI | GCATC | 5 cut(s) | 927, 1443, 1470, 1592, 2377 |
| BmtI | GCTAGC | 1 cut(s) | 1761 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2206 |
| BpiI | GAAGAC | 2 cut(s) | 1053, 3531 |
| BpmI | CTGGAG | 7 cut(s) | 37, 157, 426, 2652, 2865, 2943, 3266 |
| Bpu10I | CCTNAGC | 6 cut(s) | 456, 762, 1086, 1315, 3160, 3533 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2709 |
| Bpu14I | TTCGAA | 1 cut(s) | 2311 |
| BpuEI | CTTGAG | 3 cut(s) | 327, 1893, 3080 |
| BpuMI | CCSGG | 1 cut(s) | 273 |
| BsaBI | GATNNNNATC | 3 cut(s) | 594, 1062, 3351 |
| BsaJI | CCNNGG | 3 cut(s) | 1507, 2538, 3519 |
| BsaWI | WCCGGW | 1 cut(s) | 3393 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3177, 3207 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 120, 278, 1090, 1307, 1472, 2543, 2585, 2966 |
| Bse1I | ACTGG | 7 cut(s) | 13, 20, 174, 543, 2282, 2374, 3249 |
| Bse3DI | GCAATG | 3 cut(s) | 371, 755, 1689 |
| Bse8I | GATNNNNATC | 3 cut(s) | 594, 1062, 3351 |
| BseAI | TCCGGA | 1 cut(s) | 3393 |
| BseBI | CCWGG | 3 cut(s) | 2120, 2961, 3520 |
| BseDI | CCNNGG | 3 cut(s) | 1507, 2538, 3519 |
| BseGI | GGATG | 8 cut(s) | 110, 235, 578, 595, 906, 1485, 1852, 2676 |
| BseJI | GATNNNNATC | 3 cut(s) | 594, 1062, 3351 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 120, 278, 1090, 1307, 1472, 2543, 2585, 2966 |
| BseMI | GCAATG | 3 cut(s) | 371, 755, 1689 |
| BseNI | ACTGG | 7 cut(s) | 13, 20, 174, 543, 2282, 2374, 3249 |
| BseRI | GAGGAG | 2 cut(s) | 906, 1553 |
| BseSI | GKGCMC | 1 cut(s) | 3454 |
| BseYI | CCCAGC | 1 cut(s) | 1771 |
| BsgI | GTGCAG | 2 cut(s) | 414, 2178 |
| BshFI | GGCC | 2 cut(s) | 1506, 3218 |
| BshNI | GGYRCC | 2 cut(s) | 424, 3515 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1292, 1545, 2668, 3305 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2225, 3453 |
| BsiSI | CCGG | 2 cut(s) | 273, 3394 |
| BslFI | GGGAC | 1 cut(s) | 3455 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 120, 278, 1090, 1307, 1472, 2543, 2585, 2966 |
| BsmAI | GTCTC | 2 cut(s) | 345, 3134 |
| BsmFI | GGGAC | 1 cut(s) | 3455 |
| BsmI | GAATGC | 1 cut(s) | 2707 |
| BsnI | GGCC | 2 cut(s) | 1506, 3218 |
| BsoBI | CYCGRG | 2 cut(s) | 2225, 3453 |
| Bsp119I | TTCGAA | 1 cut(s) | 2311 |
| Bsp1286I | GDGCHC | 7 cut(s) | 893, 1292, 1545, 2668, 2959, 3305, 3454 |
| Bsp13I | TCCGGA | 1 cut(s) | 3393 |
| Bsp1407I | TGTACA | 1 cut(s) | 1141 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2709 |
| BspACI | CCGC | 3 cut(s) | 330, 583, 3458 |
| BspANI | GGCC | 2 cut(s) | 1506, 3218 |
| BspEI | TCCGGA | 1 cut(s) | 3393 |
| BspLI | GGNNCC | 5 cut(s) | 426, 2562, 2958, 3398, 3517 |
| BspMAI | CTGCAG | 3 cut(s) | 1845, 3034, 3544 |
| BspMI | ACCTGC | 5 cut(s) | 436, 610, 676, 793, 1762 |
| BspOI | GCTAGC | 1 cut(s) | 1761 |
| BspPI | GGATC | 6 cut(s) | 98, 238, 635, 752, 978, 1604 |
| BspQI | GCTCTTC | 1 cut(s) | 644 |
| BspT104I | TTCGAA | 1 cut(s) | 2311 |
| BspT107I | GGYRCC | 2 cut(s) | 424, 3515 |
| BsrBI | CCGCTC | 1 cut(s) | 3458 |
| BsrDI | GCAATG | 3 cut(s) | 371, 755, 1689 |
| BsrGI | TGTACA | 1 cut(s) | 1141 |
| BsrI | ACTGG | 7 cut(s) | 13, 20, 174, 543, 2282, 2374, 3249 |
| BssECI | CCNNGG | 3 cut(s) | 1507, 2538, 3519 |
| BssT1I | CCWWGG | 2 cut(s) | 1507, 2538 |
| Bst2UI | CCWGG | 3 cut(s) | 2120, 2961, 3520 |
| Bst6I | CTCTTC | 3 cut(s) | 644, 924, 3132 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1873, 2338, 2663 |
| BstAUI | TGTACA | 1 cut(s) | 1141 |
| BstBI | TTCGAA | 1 cut(s) | 2311 |
| BstC8I | GCNNGC | 4 cut(s) | 1092, 1322, 1759, 1830 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2583 |
| BstF5I | GGATG | 8 cut(s) | 110, 235, 578, 595, 906, 1485, 1852, 2676 |
| BstH2I | RGCGCY | 2 cut(s) | 279, 3540 |
| BstHHI | GCGC | 3 cut(s) | 278, 1096, 3539 |
| BstMAI | GTCTC | 2 cut(s) | 345, 3134 |
| BstNI | CCWGG | 3 cut(s) | 2120, 2961, 3520 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2206 |
| BstSCI | CCNGG | 4 cut(s) | 271, 2118, 2959, 3518 |
| BstSFI | CTRYAG | 4 cut(s) | 1205, 1841, 3030, 3540 |
| BstSLI | GKGCMC | 1 cut(s) | 3454 |
| BstV2I | GAAGAC | 2 cut(s) | 1053, 3531 |
| BstX2I | RGATCY | 4 cut(s) | 103, 757, 2840, 3352 |
| BstYI | RGATCY | 4 cut(s) | 103, 757, 2840, 3352 |
| BsuI | GTATCC | 1 cut(s) | 516 |
| BsuRI | GGCC | 2 cut(s) | 1506, 3218 |
| BtgZI | GCGATG | 2 cut(s) | 1170, 1929 |
| BtsCI | GGATG | 8 cut(s) | 110, 235, 578, 595, 906, 1485, 1852, 2676 |
| BveI | ACCTGC | 5 cut(s) | 436, 610, 676, 793, 1762 |
| Cac8I | GCNNGC | 4 cut(s) | 1092, 1322, 1759, 1830 |
| CaiI | CAGNNNCTG | 1 cut(s) | 320 |
| CfoI | GCGC | 3 cut(s) | 278, 1096, 3539 |
| Cfr13I | GGNCC | 3 cut(s) | 281, 435, 2822 |
| CseI | GACGC | 2 cut(s) | 1313, 2915 |
| CsiI | ACCWGGT | 1 cut(s) | 2118 |
| Csp6I | GTAC | 7 cut(s) | 87, 396, 737, 1142, 1277, 2937, 3511 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3297, 3332 |
| CviQI | GTAC | 7 cut(s) | 87, 396, 737, 1142, 1277, 2937, 3511 |
| DraI | TTTAAA | 3 cut(s) | 985, 1566, 2140 |
| DraIII | CACNNNGTG | 1 cut(s) | 2663 |
| EaeI | YGGCCR | 1 cut(s) | 1504 |
| Eam1104I | CTCTTC | 3 cut(s) | 644, 924, 3132 |
| EarI | CTCTTC | 3 cut(s) | 644, 924, 3132 |
| Ecl136II | GAGCTC | 2 cut(s) | 1290, 1543 |
| Eco130I | CCWWGG | 2 cut(s) | 1507, 2538 |
| Eco24I | GRGCYC | 4 cut(s) | 893, 1292, 1545, 2959 |
| Eco32I | GATATC | 1 cut(s) | 3127 |
| Eco47I | GGWCC | 3 cut(s) | 281, 435, 2822 |
| Eco47III | AGCGCT | 1 cut(s) | 3538 |
| Eco53kI | GAGCTC | 2 cut(s) | 1290, 1543 |
| Eco57I | CTGAAG | 9 cut(s) | 120, 435, 512, 1323, 2112, 2282, 2763, 3254, 3484 |
| Eco88I | CYCGRG | 2 cut(s) | 2225, 3453 |
| EcoICRI | GAGCTC | 2 cut(s) | 1290, 1543 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2583 |
| EcoRII | CCWGG | 3 cut(s) | 2118, 2959, 3518 |
| EcoRV | GATATC | 1 cut(s) | 3127 |
| EcoT14I | CCWWGG | 2 cut(s) | 1507, 2538 |
| EcoT22I | ATGCAT | 3 cut(s) | 836, 942, 1698 |
| EcoT38I | GRGCYC | 4 cut(s) | 893, 1292, 1545, 2959 |
| ErhI | CCWWGG | 2 cut(s) | 1507, 2538 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 3002, 3034, 3516, 3548 |
| FaqI | GGGAC | 1 cut(s) | 3455 |
| FauI | CCCGC | 1 cut(s) | 590 |
| FauNDI | CATATG | 2 cut(s) | 1501, 2058 |
| FbaI | TGATCA | 1 cut(s) | 3346 |
| FblI | GTMKAC | 3 cut(s) | 964, 1201, 3055 |
| FokI | GGATG | 8 cut(s) | 97, 222, 565, 582, 893, 1492, 1859, 2663 |
| FriOI | GRGCYC | 4 cut(s) | 893, 1292, 1545, 2959 |
| FspBI | CTAG | 5 cut(s) | 1758, 2148, 3042, 3122, 3228 |
| GlaI | GCGC | 3 cut(s) | 277, 1095, 3538 |
| GsaI | CCCAGC | 1 cut(s) | 1775 |
| GsuI | CTGGAG | 7 cut(s) | 37, 157, 426, 2652, 2865, 2943, 3266 |
| HaeII | RGCGCY | 2 cut(s) | 279, 3540 |
| HaeIII | GGCC | 2 cut(s) | 1506, 3218 |
| HapII | CCGG | 2 cut(s) | 273, 3394 |
| HgaI | GACGC | 2 cut(s) | 1313, 2915 |
| HhaI | GCGC | 3 cut(s) | 278, 1096, 3539 |
| Hin6I | GCGC | 3 cut(s) | 276, 1094, 3537 |
| HinP1I | GCGC | 3 cut(s) | 276, 1094, 3537 |
| HincII | GTYRAC | 3 cut(s) | 965, 2651, 2743 |
| HindII | GTYRAC | 3 cut(s) | 965, 2651, 2743 |
| HindIII | AAGCTT | 3 cut(s) | 2233, 2983, 3496 |
| HpaI | GTTAAC | 1 cut(s) | 2743 |
| HpaII | CCGG | 2 cut(s) | 273, 3394 |
| HphI | GGTGA | 9 cut(s) | 23, 1966, 2008, 2363, 2370, 2526, 3076, 3191, 3472 |
| Hpy166II | GTNNAC | 9 cut(s) | 87, 438, 965, 1202, 1957, 2651, 2743, 3056, 3319 |
| Hpy8I | GTNNAC | 9 cut(s) | 87, 438, 965, 1202, 1957, 2651, 2743, 3056, 3319 |
| HpyCH4IV | ACGT | 2 cut(s) | 1521, 3444 |
| HpySE526I | ACGT | 2 cut(s) | 1521, 3444 |
| HspAI | GCGC | 3 cut(s) | 276, 1094, 3537 |
| Kpn2I | TCCGGA | 1 cut(s) | 3393 |
| Ksp22I | TGATCA | 1 cut(s) | 3346 |
| KspAI | GTTAAC | 1 cut(s) | 2743 |
| LguI | GCTCTTC | 1 cut(s) | 644 |
| LweI | GCATC | 5 cut(s) | 927, 1443, 1470, 1592, 2377 |
| MabI | ACCWGGT | 1 cut(s) | 2118 |
| MaeI | CTAG | 5 cut(s) | 1758, 2148, 3042, 3122, 3228 |
| MaeII | ACGT | 2 cut(s) | 1521, 3444 |
| MbiI | CCGCTC | 1 cut(s) | 3458 |
| MflI | RGATCY | 4 cut(s) | 103, 757, 2840, 3352 |
| MhlI | GDGCHC | 7 cut(s) | 893, 1292, 1545, 2668, 2959, 3305, 3454 |
| MlsI | TGGCCA | 1 cut(s) | 1506 |
| MluNI | TGGCCA | 1 cut(s) | 1506 |
| MlyI | GAGTC | 5 cut(s) | 164, 1138, 2141, 2237, 3521 |
| MmeI | TCCRAC | 3 cut(s) | 2524, 2589, 2887 |
| Mox20I | TGGCCA | 1 cut(s) | 1506 |
| Mph1103I | ATGCAT | 3 cut(s) | 836, 942, 1698 |
| MroI | TCCGGA | 1 cut(s) | 3393 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1855, 2551 |
| MscI | TGGCCA | 1 cut(s) | 1506 |
| MslI | CAYNNNNRTG | 5 cut(s) | 240, 829, 1158, 2271, 3212 |
| Msp20I | TGGCCA | 1 cut(s) | 1506 |
| MspA1I | CMGCKG | 2 cut(s) | 3029, 3545 |
| MspI | CCGG | 2 cut(s) | 273, 3394 |
| MspR9I | CCNGG | 4 cut(s) | 273, 2120, 2961, 3520 |
| Mva1269I | GAATGC | 1 cut(s) | 2707 |
| MvaI | CCWGG | 3 cut(s) | 2120, 2961, 3520 |
| NciI | CCSGG | 1 cut(s) | 273 |
| NdeI | CATATG | 2 cut(s) | 1501, 2058 |
| NheI | GCTAGC | 1 cut(s) | 1757 |
| NlaIV | GGNNCC | 5 cut(s) | 426, 2562, 2958, 3398, 3517 |
| NmuCI | GTSAC | 9 cut(s) | 11, 176, 1913, 1996, 2181, 2376, 2927, 2988, 3414 |
| NsiI | ATGCAT | 3 cut(s) | 836, 942, 1698 |
| NspV | TTCGAA | 1 cut(s) | 2311 |
| PaeR7I | CTCGAG | 1 cut(s) | 2225 |
| PaqCI | CACCTGC | 2 cut(s) | 436, 1762 |
| PciI | ACATGT | 3 cut(s) | 398, 700, 817 |
| PciSI | GCTCTTC | 1 cut(s) | 644 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2615 |
| PctI | GAATGC | 1 cut(s) | 2707 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1855, 2551 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2966 |
| PfoI | TCCNGGA | 1 cut(s) | 2959 |
| PleI | GAGTC | 5 cut(s) | 164, 1137, 2140, 2236, 3521 |
| PpsI | GAGTC | 5 cut(s) | 164, 1137, 2140, 2236, 3521 |
| PscI | ACATGT | 3 cut(s) | 398, 700, 817 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2206 |
| Psp124BI | GAGCTC | 2 cut(s) | 1292, 1545 |
| Psp6I | CCWGG | 3 cut(s) | 2118, 2959, 3518 |
| PspFI | CCCAGC | 1 cut(s) | 1771 |
| PspGI | CCWGG | 3 cut(s) | 2118, 2959, 3518 |
| PspN4I | GGNNCC | 5 cut(s) | 426, 2562, 2958, 3398, 3517 |
| PspPI | GGNCC | 3 cut(s) | 281, 435, 2822 |
| PstI | CTGCAG | 3 cut(s) | 1845, 3034, 3544 |
| PstNI | CAGNNNCTG | 1 cut(s) | 320 |
| PsuI | RGATCY | 4 cut(s) | 103, 757, 2840, 3352 |
| PvuII | CAGCTG | 2 cut(s) | 3029, 3545 |
| RsaI | GTAC | 7 cut(s) | 88, 397, 738, 1143, 1278, 2938, 3512 |
| RsaNI | GTAC | 7 cut(s) | 87, 396, 737, 1142, 1277, 2937, 3511 |
| RseI | CAYNNNNRTG | 5 cut(s) | 240, 829, 1158, 2271, 3212 |
| SacI | GAGCTC | 2 cut(s) | 1292, 1545 |
| SalI | GTCGAC | 1 cut(s) | 963 |
| SapI | GCTCTTC | 1 cut(s) | 644 |
| Sau96I | GGNCC | 3 cut(s) | 281, 435, 2822 |
| SchI | GAGTC | 5 cut(s) | 164, 1138, 2141, 2237, 3521 |
| ScrFI | CCNGG | 4 cut(s) | 273, 2120, 2961, 3520 |
| SduI | GDGCHC | 7 cut(s) | 893, 1292, 1545, 2668, 2959, 3305, 3454 |
| SexAI | ACCWGGT | 1 cut(s) | 2118 |
| SfaNI | GCATC | 5 cut(s) | 927, 1443, 1470, 1592, 2377 |
| SfcI | CTRYAG | 4 cut(s) | 1205, 1841, 3030, 3540 |
| Sfr274I | CTCGAG | 1 cut(s) | 2225 |
| SfuI | TTCGAA | 1 cut(s) | 2311 |
| SinI | GGWCC | 3 cut(s) | 281, 435, 2822 |
| SlaI | CTCGAG | 1 cut(s) | 2225 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 240, 829, 1158, 2271, 3212 |
| SmlI | CTYRAG | 4 cut(s) | 342, 1908, 2225, 3059 |
| SmoI | CTYRAG | 4 cut(s) | 342, 1908, 2225, 3059 |
| SsiI | CCGC | 3 cut(s) | 330, 583, 3458 |
| SspI | AATATT | 3 cut(s) | 1577, 2641, 3312 |
| SspMI | CTAG | 5 cut(s) | 1758, 2148, 3042, 3122, 3228 |
| SstI | GAGCTC | 2 cut(s) | 1292, 1545 |
| StyD4I | CCNGG | 4 cut(s) | 271, 2118, 2959, 3518 |
| StyI | CCWWGG | 2 cut(s) | 1507, 2538 |
| TaiI | ACGT | 2 cut(s) | 1524, 3447 |
| TatI | WGTACW | 3 cut(s) | 395, 736, 1141 |
| TseFI | GTSAC | 9 cut(s) | 11, 176, 1913, 1996, 2181, 2376, 2927, 2988, 3414 |
| Tsp45I | GTSAC | 9 cut(s) | 11, 176, 1913, 1996, 2181, 2376, 2927, 2988, 3414 |
| TspGWI | ACGGA | 1 cut(s) | 1375 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2966 |
| VpaK11BI | GGWCC | 3 cut(s) | 281, 435, 2822 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2583 |
| XapI | RAATTY | 7 cut(s) | 50, 146, 505, 1560, 1709, 2068, 2547 |
| XbaI | TCTAGA | 1 cut(s) | 3121 |
| XhoI | CTCGAG | 1 cut(s) | 2225 |
| XmiI | GTMKAC | 3 cut(s) | 964, 1201, 3055 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1855, 2551 |
| XspI | CTAG | 5 cut(s) | 1758, 2148, 3042, 3122, 3228 |
| Zsp2I | ATGCAT | 3 cut(s) | 836, 942, 1698 |