FvH4_7g04352

Mediator of RNA polymerase II transcription subunit 15a-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0001760
Physical Location & Seq
Reverse (-)
4926381 .. 4929276
2896 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g04352.t1

Sequence Viewer

Length: 2424 bp
ATGCGTGAAAGTTTTAAACTTGGAGGCCCTATGATTGTGGCCTTGTGGGAGGCCTTAGGCACAAGTCTTGCTGGTCTTGCCTTAAGGCCGGCCATGAATTTATCGAATACTCATTATACTTTGTCACAATCCATTGGAAACAACTCTCTATCGGTTCCGTCTTCTGATATCCAGCAGAATCATCAGATGTCTTCTTTTCATCAGACATCACAATCTGGGATTAACAATCATCCACAGAAGCATGATGTGATGAGGAGAAGATTAGCTGCTGCCAATCTACAACAGAATCAGTCACCTGGCTTCGACTTAGCGCAGCAACGACACATGTTAGCATACCAGCAGAATCATGCACAACAGAAGTTACATGGACATAATGTAAATCTTTCAGGTCCACATCATGAGCAATTGAGCCAAAGAAGGATTTTCTCTACACAGCAACAAACCCTTGAACAGAAGTTACATGGACAGAATGTAAATCTTCCAGGTCCACATCATGCGCAATTGAGCCAAAGAAGCATTTTCTCTACACAGCAACAAACTCTTGAAAGGCAGATGAATACTTCACAGGTTGAGAAGACGCAAAGGCAGCGAACCCAAGTAGAACAATATGGGCAGCAAACGCATCAAATGACAGGAATGCCAGCTTCCACATTATTAAGGGAAGAAGGGGAGATCTATCGAAAGGTCCAAATATTAAAAACCAAGTATGCGAGACCACTAACAGTTATCTTTCAAAGGCTCACATATTGTCTCCAGAACCTAGACAAACACAATATCAGCAAACTTGAAGAAGTAAAGAGATGGTATCAGACGGTCAAGCATATCCTTGAGATACTAAATAGGGCAGAAAGCAACATTACACGTATTACTGAGGAGCACTTGGGTCTACTTGAGAACAAAATCAGGAATATTTTAAACCGATTTATAGACCAAAAGCCTGTCTCATCCTCTCAAGAGCATGAAAAAACTTGTTTTAATGTTCACCCCATGCGTCAATCTGTGCAACTTGATTCTCAGACTCCTCAAGCTCAGACCAAGCAAGGCAAAAAGAAGCCACCACCGCAGAGAGTGAACATAGAATGTCTTGAAACAAAGATGCAGCAGAGAAATGTGACAAACTTGATGAACTGTTCTGAACCTCCCATCCTGCAACATGGCACAAAAATTTTGCAGAGAAATTTGACCAAAAAGGATTCAGATCAAACAAGTCTCTCCAGAAACTTAACAATGCCTACATGCGGCCCCCTACAACAAAATGTCAAAAGCCCCATTCATGGACCACAATCAGATGCGAATACTTTTGAGTCAAGATTTAGTGTACCTAAAGATGTGCACCTCCAACAGCAGGATGTGCAGACTCAAAAATCAAAACAGCAATTACTGCAGCAGAATCACCGACCTGTGAAGTTGCATTCTGAAGCGTTTCCTAATCCTTTGCCGAAAAATCATATTTCTTCAGGTCAGCAAGTTCCTAGACATACTTCTCAAAGTGAAAAGAACAGTCTCCCAATTCGTCTACGTGAATCTAGAAATCCTTTGAACTCAATAACCTCACCCTCTAGATTTTCTTCTTTGGCTCCCAAGGCTACATCACCTATGCCAGTGGACTCGGAGAGACCTATGCCAGATACAGCATCCCATTCAAGTGTGGGAAATATTGGAGATGAACAAGTAGGAGGTGCGCCAGAAGCCCCATCATTAAGTACTCCTTTACTTGAAAAGACCAATGATGACAGTCATTGTGACAAGTCCATAGTAAATTCTTATCAGGTGCAGCCTATTCAGAAATTAATCAAGGTGGTAAACTCCATGTCATATAAAGCACTAGCTGGTTCTGCTTCAGACAATGCTTCAGTACTGTATGATAGGATGGAAATGAAGCGCCCGAGAAGTGCATTGCCAACTATTGATGCTGATTCAGAAAGTGGGATATGTCATATGATGAAAAGGCCTAGGCTTGGGGTGCACCAAACCCTCTTAGAGGAAATTAGAGAAATCAACCTACAACTAATAGACACTGTACTAGATATCAGTGACCAAGAGACTGTTGCATTAGTTAAGGATGGTGAAGGAACCATTGTCAGGTGCTCCTTCGTTGGCGTGTCCGTCAGTCCTGATTTGATGTCATCTCAAATGTTTTCATTCAGATTGCTTGTGCCTGCAAATTATCCATTCTGCTCTCCTATATTTTTGGACAAGTTGACAATGGAAGTCGGGGATGAGCTGGAGGATCTCTCAGCAAAAGTCATGTCAAAGGTAAGTCGCTCTCTCCGGACCCTAAAGGAGCCCTTATCTGTTGGGGATATAGCAACGGTATGGGATACATGCGCCCGAGAGGTTGTCTGTGAATGTGCACAACAGAACGGGGGAGGAAGCTTCAGTTCCAAGTATGGAACCTGGGAAGATATCCTCACTATTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIX_2

Protein Analysis

808

Amino Acids

90.78

Weight (kDa)

9.05

Isoelectric Point (pI)

62.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 498
AccI GTMKAC 2 cut(s) 886, 1516
AccIII TCCGGA 1 cut(s) 2271
AciI CCGC 2 cut(s) 1061, 1239
AclWI GGATC 1 cut(s) 2238
AcoI YGGCCR 1 cut(s) 90
AcsI RAATTY 4 cut(s) 97, 1164, 1177, 1759
AcuI CTGAAG 5 cut(s) 1437, 1440, 1824, 1836, 2362
AfaI GTAC 4 cut(s) 1320, 1705, 1857, 2022
AfiI CCNNNNNNNGG 6 cut(s) 1238, 1274, 1345, 1958, 1981, 2082
AflII CTTAAG 1 cut(s) 82
AflIII ACRYGT 2 cut(s) 324, 860
AgsI TTSAA 8 cut(s) 449, 545, 734, 788, 1088, 1540, 1644, 1718
AjnI CCWGG 3 cut(s) 295, 481, 2396
AloI GAACNNNNNNTCC 2 cut(s) 1128, 1160
AluBI AGCT 6 cut(s) 266, 644, 1028, 1829, 2224, 2376
AluI AGCT 6 cut(s) 266, 644, 1028, 1829, 2224, 2376
Alw21I GWGCWC 5 cut(s) 879, 1335, 1968, 2090, 2356
Alw26I GTCTC 7 cut(s) 706, 755, 946, 1214, 1508, 1609, 2036
Alw44I GTGCAC 3 cut(s) 1331, 1964, 2352
AlwI GGATC 1 cut(s) 2238
Ama87I CYCGRG 2 cut(s) 1885, 2331
Aor13HI TCCGGA 1 cut(s) 2271
AoxI GGCC 7 cut(s) 25, 39, 51, 86, 90, 1240, 1949
ApaLI GTGCAC 3 cut(s) 1331, 1964, 2352
ApeKI GCWGC 8 cut(s) 266, 269, 313, 586, 613, 1099, 1384, 1774
ApoI RAATTY 4 cut(s) 97, 1164, 1177, 1759
ArsI GACNNNNNNTTYG 2 cut(s) 2234, 2266
AseI ATTAAT 1 cut(s) 1790
Asp700I GAANNNNTTC 1 cut(s) 1422
AspA2I CCTAGG 1 cut(s) 1952
AspLEI GCGC 5 cut(s) 313, 499, 1684, 1884, 2330
AspS9I GGNCC 7 cut(s) 26, 389, 485, 685, 1241, 1277, 2274
AsuHPI GGTGA 6 cut(s) 285, 974, 1385, 1545, 1584, 2078
AvaI CYCGRG 2 cut(s) 1885, 2331
AvaII GGWCC 5 cut(s) 389, 485, 685, 1277, 2274
AvrII CCTAGG 1 cut(s) 1952
AxyI CCTNAGG 1 cut(s) 55
BaeGI GKGCMC 3 cut(s) 1335, 1968, 2356
BanII GRGCYC 1 cut(s) 2289
BbsI GAAGAC 3 cut(s) 153, 183, 581
Bbv12I GWGCWC 5 cut(s) 879, 1335, 1968, 2090, 2356
BbvI GCAGC 8 cut(s) 253, 256, 325, 598, 625, 1111, 1396, 1786
BccI CCATC 5 cut(s) 795, 1151, 1702, 1864, 2057
BciT130I CCWGG 3 cut(s) 297, 483, 2398
BciVI GTATCC 1 cut(s) 2314
BcoDI GTCTC 7 cut(s) 706, 755, 946, 1214, 1508, 1609, 2036
BfaI CTAG 7 cut(s) 761, 1473, 1527, 1560, 1826, 1953, 2024
BfmI CTRYAG 1 cut(s) 1382
BfoI RGCGCY 1 cut(s) 1885
BfrI CTTAAG 1 cut(s) 82
BfuI GTATCC 1 cut(s) 2314
BglII AGATCT 1 cut(s) 672
BisI GCNGC 9 cut(s) 267, 270, 314, 587, 614, 1100, 1240, 1385, 1775
BlnI CCTAGG 1 cut(s) 1952
BlsI GCNGC 9 cut(s) 268, 271, 315, 588, 615, 1101, 1241, 1386, 1776
BmcAI AGTACT 2 cut(s) 1705, 1857
Bme1390I CCNGG 3 cut(s) 297, 483, 2398
Bme18I GGWCC 5 cut(s) 389, 485, 685, 1277, 2274
BmeT110I CYCGRG 2 cut(s) 1885, 2331
BmgT120I GGNCC 7 cut(s) 26, 389, 485, 685, 1241, 1277, 2274
BmiI GGNNCC 7 cut(s) 156, 1243, 1578, 2074, 2276, 2286, 2395
BmrFI CCNGG 3 cut(s) 297, 483, 2398
BmsI GCATC 5 cut(s) 631, 1086, 1279, 1643, 1900
BpiI GAAGAC 3 cut(s) 153, 183, 581
BplI GAGNNNNNCTC 2 cut(s) 2219, 2251
BpmI CTGGAG 3 cut(s) 737, 1198, 2246
BpuEI CTTGAG 4 cut(s) 848, 911, 936, 1008
BsaAI YACGTR 2 cut(s) 863, 1520
BsaBI GATNNNNATC 1 cut(s) 1197
BsaI GGTCTC 2 cut(s) 706, 1609
BsaJI CCNNGG 3 cut(s) 1581, 1952, 2397
BsaWI WCCGGW 1 cut(s) 2271
Bsc4I CCNNNNNNNGG 6 cut(s) 1238, 1274, 1345, 1958, 1981, 2082
Bse118I RCCGGY 1 cut(s) 88
Bse1I ACTGG 1 cut(s) 1601
Bse21I CCTNAGG 1 cut(s) 55
Bse3DI GCAATG 1 cut(s) 1895
Bse8I GATNNNNATC 1 cut(s) 1197
BseAI TCCGGA 1 cut(s) 2271
BseBI CCWGG 3 cut(s) 297, 483, 2398
BseDI CCNNGG 3 cut(s) 1581, 1952, 2397
BseGI GGATG 8 cut(s) 229, 944, 1143, 1354, 1634, 1875, 2068, 2224
BseJI GATNNNNATC 1 cut(s) 1197
BseLI CCNNNNNNNGG 6 cut(s) 1238, 1274, 1345, 1958, 1981, 2082
BseMI GCAATG 1 cut(s) 1895
BseMII CTCAG 4 cut(s) 861, 1028, 1043, 2250
BseNI ACTGG 1 cut(s) 1601
BseRI GAGGAG 3 cut(s) 268, 887, 1011
BseSI GKGCMC 3 cut(s) 1335, 1968, 2356
BseXI GCAGC 8 cut(s) 253, 256, 325, 598, 625, 1111, 1396, 1786
BsgI GTGCAG 2 cut(s) 1373, 1793
BshFI GGCC 7 cut(s) 27, 41, 53, 88, 92, 1242, 1951
BsiHKAI GWGCWC 5 cut(s) 879, 1335, 1968, 2090, 2356
BsiHKCI CYCGRG 2 cut(s) 1885, 2331
BsiSI CCGG 2 cut(s) 89, 2272
BslI CCNNNNNNNGG 6 cut(s) 1238, 1274, 1345, 1958, 1981, 2082
BsmAI GTCTC 7 cut(s) 706, 755, 946, 1214, 1508, 1609, 2036
BsmI GAATGC 2 cut(s) 642, 1411
BsnI GGCC 7 cut(s) 27, 41, 53, 88, 92, 1242, 1951
Bso31I GGTCTC 2 cut(s) 706, 1609
BsoBI CYCGRG 2 cut(s) 1885, 2331
Bsp1286I GDGCHC 6 cut(s) 879, 1335, 1968, 2090, 2289, 2356
Bsp13I TCCGGA 1 cut(s) 2271
Bsp143I GATC 3 cut(s) 672, 1198, 2230
BspACI CCGC 2 cut(s) 1061, 1239
BspANI GGCC 7 cut(s) 27, 41, 53, 88, 92, 1242, 1951
BspCNI CTCAG 4 cut(s) 862, 1027, 1042, 2249
BspEI TCCGGA 1 cut(s) 2271
BspHI TCATGA 1 cut(s) 397
BspLI GGNNCC 7 cut(s) 156, 1243, 1578, 2074, 2276, 2286, 2395
BspMAI CTGCAG 1 cut(s) 1386
BspPI GGATC 1 cut(s) 2238
BspTI CTTAAG 1 cut(s) 82
BspTNI GGTCTC 2 cut(s) 706, 1609
BsrDI GCAATG 1 cut(s) 1895
BsrFI RCCGGY 1 cut(s) 88
BsrI ACTGG 1 cut(s) 1601
BssAI RCCGGY 1 cut(s) 88
BssECI CCNNGG 3 cut(s) 1581, 1952, 2397
BssMI GATC 3 cut(s) 672, 1198, 2230
BssT1I CCWWGG 2 cut(s) 1581, 1952
Bst2UI CCWGG 3 cut(s) 297, 483, 2398
Bst4CI ACNGT 9 cut(s) 724, 814, 1130, 1502, 1736, 1860, 2020, 2047, 2314
BstAFI CTTAAG 1 cut(s) 82
BstAPI GCANNNNNTGC 2 cut(s) 1351, 1381
BstBAI YACGTR 2 cut(s) 863, 1520
BstC8I GCNNGC 3 cut(s) 90, 642, 2160
BstDEI CTNAG 7 cut(s) 55, 307, 870, 1014, 1029, 1978, 2236
BstENI CCTNNNNNAGG 1 cut(s) 1979
BstF5I GGATG 8 cut(s) 229, 944, 1143, 1354, 1634, 1875, 2068, 2224
BstH2I RGCGCY 1 cut(s) 1885
BstHHI GCGC 5 cut(s) 313, 499, 1684, 1884, 2330
BstKTI GATC 3 cut(s) 675, 1201, 2233
BstMAI GTCTC 7 cut(s) 706, 755, 946, 1214, 1508, 1609, 2036
BstMBI GATC 3 cut(s) 672, 1198, 2230
BstNI CCWGG 3 cut(s) 297, 483, 2398
BstNSI RCATGY 3 cut(s) 328, 1239, 2328
BstSCI CCNGG 3 cut(s) 295, 481, 2396
BstSFI CTRYAG 1 cut(s) 1382
BstSLI GKGCMC 3 cut(s) 1335, 1968, 2356
BstV1I GCAGC 8 cut(s) 253, 256, 325, 598, 625, 1111, 1396, 1786
BstV2I GAAGAC 3 cut(s) 153, 183, 581
BstX2I RGATCY 2 cut(s) 672, 2230
BstYI RGATCY 2 cut(s) 672, 2230
Bsu36I CCTNAGG 1 cut(s) 55
BsuI GTATCC 1 cut(s) 2314
BsuRI GGCC 7 cut(s) 27, 41, 53, 88, 92, 1242, 1951
BtsCI GGATG 8 cut(s) 229, 944, 1143, 1354, 1634, 1875, 2068, 2224
BtsIMutI CAGTG 3 cut(s) 1608, 2016, 2038
Cac8I GCNNGC 3 cut(s) 90, 642, 2160
CciI TCATGA 1 cut(s) 397
CfoI GCGC 5 cut(s) 313, 499, 1684, 1884, 2330
Cfr10I RCCGGY 1 cut(s) 88
Cfr13I GGNCC 7 cut(s) 26, 389, 485, 685, 1241, 1277, 2274
CseI GACGC 2 cut(s) 586, 980
Csp6I GTAC 4 cut(s) 1319, 1704, 1856, 2021
CviQI GTAC 4 cut(s) 1319, 1704, 1856, 2021
DdeI CTNAG 7 cut(s) 55, 307, 870, 1014, 1029, 1978, 2236
DpnI GATC 3 cut(s) 674, 1200, 2232
DpnII GATC 3 cut(s) 672, 1198, 2230
DraI TTTAAA 2 cut(s) 16, 915
EaeI YGGCCR 1 cut(s) 90
Eco130I CCWWGG 2 cut(s) 1581, 1952
Eco147I AGGCCT 2 cut(s) 53, 1951
Eco24I GRGCYC 1 cut(s) 2289
Eco31I GGTCTC 2 cut(s) 706, 1609
Eco32I GATATC 3 cut(s) 169, 2029, 2407
Eco47I GGWCC 5 cut(s) 389, 485, 685, 1277, 2274
Eco57I CTGAAG 5 cut(s) 1437, 1440, 1824, 1836, 2362
Eco81I CCTNAGG 1 cut(s) 55
Eco88I CYCGRG 2 cut(s) 1885, 2331
EcoNI CCTNNNNNAGG 1 cut(s) 1979
EcoO109I RGGNCCY 1 cut(s) 26
EcoRII CCWGG 3 cut(s) 295, 481, 2396
EcoRV GATATC 3 cut(s) 169, 2029, 2407
EcoT14I CCWWGG 2 cut(s) 1581, 1952
EcoT38I GRGCYC 1 cut(s) 2289
ErhI CCWWGG 2 cut(s) 1581, 1952
FalI AAGNNNNNCTT 4 cut(s) 1693, 1725, 2273, 2305
FauNDI CATATG 1 cut(s) 1938
FblI GTMKAC 2 cut(s) 886, 1516
Fnu4HI GCNGC 9 cut(s) 267, 270, 314, 587, 614, 1100, 1240, 1385, 1775
FokI GGATG 8 cut(s) 216, 931, 1130, 1361, 1621, 1882, 2075, 2231
FriOI GRGCYC 1 cut(s) 2289
FseI GGCCGGCC 1 cut(s) 92
Fsp4HI GCNGC 9 cut(s) 267, 270, 314, 587, 614, 1100, 1240, 1385, 1775
FspBI CTAG 7 cut(s) 761, 1473, 1527, 1560, 1826, 1953, 2024
FspI TGCGCA 1 cut(s) 498
GlaI GCGC 5 cut(s) 312, 498, 1683, 1883, 2329
GluI GCNGC 9 cut(s) 267, 270, 314, 587, 614, 1100, 1240, 1385, 1775
GsuI CTGGAG 3 cut(s) 737, 1198, 2246
HaeII RGCGCY 1 cut(s) 1885
HaeIII GGCC 7 cut(s) 27, 41, 53, 88, 92, 1242, 1951
HapII CCGG 2 cut(s) 89, 2272
HgaI GACGC 2 cut(s) 586, 980
HhaI GCGC 5 cut(s) 313, 499, 1684, 1884, 2330
Hin6I GCGC 5 cut(s) 311, 497, 1682, 1882, 2328
HinP1I GCGC 5 cut(s) 311, 497, 1682, 1882, 2328
HincII GTYRAC 1 cut(s) 2202
HindII GTYRAC 1 cut(s) 2202
HindIII AAGCTT 1 cut(s) 2374
HpaII CCGG 2 cut(s) 89, 2272
HphI GGTGA 6 cut(s) 285, 974, 1385, 1545, 1584, 2078
HpyAV CCTTC 4 cut(s) 411, 659, 2063, 2101
HpyCH4III ACNGT 9 cut(s) 724, 814, 1130, 1502, 1736, 1860, 2020, 2047, 2314
HpyCH4IV ACGT 2 cut(s) 862, 1519
HpyF3I CTNAG 7 cut(s) 55, 307, 870, 1014, 1029, 1978, 2236
HpySE526I ACGT 2 cut(s) 862, 1519
HspAI GCGC 5 cut(s) 311, 497, 1682, 1882, 2328
Kpn2I TCCGGA 1 cut(s) 2271
KroI GCCGGC 1 cut(s) 88
KroNI GCCGGC 1 cut(s) 90
Kzo9I GATC 3 cut(s) 672, 1198, 2230
LmnI GCTCC 4 cut(s) 874, 1582, 2093, 2284
Lsp1109I GCAGC 8 cut(s) 253, 256, 325, 598, 625, 1111, 1396, 1786
LweI GCATC 5 cut(s) 631, 1086, 1279, 1643, 1900
MaeI CTAG 7 cut(s) 761, 1473, 1527, 1560, 1826, 1953, 2024
MaeII ACGT 2 cut(s) 862, 1519
MaeIII GTNAC 7 cut(s) 123, 291, 360, 456, 1111, 1742, 2033
MalI GATC 3 cut(s) 674, 1200, 2232
MboI GATC 3 cut(s) 672, 1198, 2230
MfeI CAATTG 2 cut(s) 404, 500
MflI RGATCY 2 cut(s) 672, 2230
MhlI GDGCHC 6 cut(s) 879, 1335, 1968, 2090, 2289, 2356
MlyI GAGTC 4 cut(s) 1012, 1313, 1351, 1601
MmeI TCCRAC 1 cut(s) 1363
MroI TCCGGA 1 cut(s) 2271
MroNI GCCGGC 1 cut(s) 88
MroXI GAANNNNTTC 1 cut(s) 1422
MslI CAYNNNNRTG 1 cut(s) 1644
MspCI CTTAAG 1 cut(s) 82
MspI CCGG 2 cut(s) 89, 2272
MspR9I CCNGG 3 cut(s) 297, 483, 2398
MunI CAATTG 2 cut(s) 404, 500
Mva1269I GAATGC 2 cut(s) 642, 1411
MvaI CCWGG 3 cut(s) 297, 483, 2398
NaeI GCCGGC 1 cut(s) 90
NdeI CATATG 1 cut(s) 1938
NdeII GATC 3 cut(s) 672, 1198, 2230
NgoMIV GCCGGC 1 cut(s) 88
NlaIV GGNNCC 7 cut(s) 156, 1243, 1578, 2074, 2276, 2286, 2395
NmuCI GTSAC 5 cut(s) 123, 291, 1111, 1742, 2033
NsbI TGCGCA 1 cut(s) 498
NspI RCATGY 3 cut(s) 328, 1239, 2328
PagI TCATGA 1 cut(s) 397
PceI AGGCCT 2 cut(s) 53, 1951
PciI ACATGT 1 cut(s) 324
PctI GAATGC 2 cut(s) 642, 1411
PdiI GCCGGC 1 cut(s) 90
PdmI GAANNNNTTC 1 cut(s) 1422
PfeI GAWTC 8 cut(s) 178, 286, 343, 1010, 1193, 1390, 1523, 1916
PkrI GCNGC 9 cut(s) 268, 271, 315, 588, 615, 1101, 1241, 1386, 1776
PleI GAGTC 4 cut(s) 1012, 1312, 1351, 1601
PpsI GAGTC 4 cut(s) 1012, 1312, 1351, 1601
Ppu21I YACGTR 2 cut(s) 863, 1520
PscI ACATGT 1 cut(s) 324
PshBI ATTAAT 1 cut(s) 1790
Psp6I CCWGG 3 cut(s) 295, 481, 2396
PspGI CCWGG 3 cut(s) 295, 481, 2396
PspN4I GGNNCC 7 cut(s) 156, 1243, 1578, 2074, 2276, 2286, 2395
PspPI GGNCC 7 cut(s) 26, 389, 485, 685, 1241, 1277, 2274
PsrI GAACNNNNNNTAC 2 cut(s) 441, 473
PstI CTGCAG 1 cut(s) 1386
PsuI RGATCY 2 cut(s) 672, 2230
RigI GGCCGGCC 1 cut(s) 92
RsaI GTAC 4 cut(s) 1320, 1705, 1857, 2022
RsaNI GTAC 4 cut(s) 1319, 1704, 1856, 2021
RseI CAYNNNNRTG 1 cut(s) 1644
SatI GCNGC 9 cut(s) 267, 270, 314, 587, 614, 1100, 1240, 1385, 1775
Sau3AI GATC 3 cut(s) 672, 1198, 2230
Sau96I GGNCC 7 cut(s) 26, 389, 485, 685, 1241, 1277, 2274
ScaI AGTACT 2 cut(s) 1705, 1857
SchI GAGTC 4 cut(s) 1012, 1313, 1351, 1601
ScrFI CCNGG 3 cut(s) 297, 483, 2398
SduI GDGCHC 6 cut(s) 879, 1335, 1968, 2090, 2289, 2356
SfaNI GCATC 5 cut(s) 631, 1086, 1279, 1643, 1900
SfcI CTRYAG 1 cut(s) 1382
SinI GGWCC 5 cut(s) 389, 485, 685, 1277, 2274
SmiMI CAYNNNNRTG 1 cut(s) 1644
SmlI CTYRAG 5 cut(s) 82, 827, 890, 951, 1023
SmoI CTYRAG 5 cut(s) 82, 827, 890, 951, 1023
SseBI AGGCCT 2 cut(s) 53, 1951
SsiI CCGC 2 cut(s) 1061, 1239
SspI AATATT 3 cut(s) 693, 910, 1657
SspMI CTAG 7 cut(s) 761, 1473, 1527, 1560, 1826, 1953, 2024
StuI AGGCCT 2 cut(s) 53, 1951
StyD4I CCNGG 3 cut(s) 295, 481, 2396
StyI CCWWGG 2 cut(s) 1581, 1952
TaaI ACNGT 9 cut(s) 724, 814, 1130, 1502, 1736, 1860, 2020, 2047, 2314
TaiI ACGT 2 cut(s) 865, 1522
TaqI TCGA 3 cut(s) 104, 303, 679
TatI WGTACW 3 cut(s) 1703, 1855, 2020
TauI GCSGC 1 cut(s) 1242
TfiI GAWTC 8 cut(s) 178, 286, 343, 1010, 1193, 1390, 1523, 1916
TscAI CASTG 3 cut(s) 1608, 2023, 2038
TseFI GTSAC 5 cut(s) 123, 291, 1111, 1742, 2033
TseI GCWGC 8 cut(s) 266, 269, 313, 586, 613, 1099, 1384, 1774
Tsp45I GTSAC 5 cut(s) 123, 291, 1111, 1742, 2033
TspGWI ACGGA 2 cut(s) 147, 2095
TspRI CASTG 3 cut(s) 1608, 2023, 2038
Vha464I CTTAAG 1 cut(s) 82
VneI GTGCAC 3 cut(s) 1331, 1964, 2352
VpaK11BI GGWCC 5 cut(s) 389, 485, 685, 1277, 2274
VspI ATTAAT 1 cut(s) 1790
XagI CCTNNNNNAGG 1 cut(s) 1979
XapI RAATTY 4 cut(s) 97, 1164, 1177, 1759
XbaI TCTAGA 2 cut(s) 1526, 1559
XceI RCATGY 3 cut(s) 328, 1239, 2328
XmaJI CCTAGG 1 cut(s) 1952
XmiI GTMKAC 2 cut(s) 886, 1516
XmnI GAANNNNTTC 1 cut(s) 1422
XspI CTAG 7 cut(s) 761, 1473, 1527, 1560, 1826, 1953, 2024
ZrmI AGTACT 2 cut(s) 1705, 1857
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.