Prupe.6G027400_v2.0.a1

Mediator of RNA polymerase II transcription subunit 15a-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0001760
Physical Location & Seq
Reverse (-)
2135211 .. 2145546
10336 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G027400.4

Sequence Viewer

Length: 1797 bp
ATGGCTACCAATAATTGGAGGCCTCCTCAAGTTAGAGAGCCCTCCATGGATGCAGGCAATTGGGGGAGTCAACTGCAGCTAGAGTCAAGGCCAAGTATTGTCAACATGATAATGGATGCATTGAAGAGGCATTTCCCCTGCTCTGGTCAAGAGAGCTCACCGGAGCTCAAGAAAATTGCTGTAAGGTTTGAGGAAATGATTTATACTGCTGCCACAAGCGAGTCGGATTATTTTGAGAAAATTGCTCTGAAGATATACTCACTGGAGACCAGATCTCAGAATGCAATAGAAAATTCTTCACCAATTAACTCTGCTGGTAATATCAACAGGCCCCCTGATCCAGATTCCGCAGCCCAGACTGGACATGCAACTAGGGGTGATTGGCAAGAGGTGGTCTATCAAAAAGCAAACATGAATTCCATTCAGTCAAATTCTGGTATGCTTCAACACCAGCATATAAAACAACAGCAGGAGCAGGAAATCAATTATGTAAATGAGTTAAAGATGAGACGAGCTGCAGGCCAGTGTGCTTTTTCCCATCAGCAATTGAAATCAGGATCTCCATTTCCTATTTCATCAACAACCCAATTCCTTCAGGCTGCATCCCCTAAAATTTCGCGACATTCTTCACCCCAAAATGACCAGCAGAATCTACTGGCTCACACAAAAGCTGGAACCTCTAGTTCCCCATTTGTCATCCCATCTCCTTCAACTCCGATGGCTCCATCCTCTGTGCCAGGGGATTCTGAGAAACCCTCCTCACTTGCAAATGCTGGGAAGATTGGGCAGCTACAAGCAACTGTTGTCGGATCACAGATCCAGTCCCTTGCCATTGGCACCCCTGGGATATCAGCCTCTCCTTTGCTTGCTGAATTTAGTGTACCAGACGGTACTCATGTTAATGCTTTGTCAACTATTTCTGGCAAGTCAAATGTTACAGAGCAGCCTCTTGAACGGTTGATTAAAGCGGTGAAATCGATGTCTTCAAATGCATTGAGTGCCTCAGTCAGTGACATTGGCTCAGTAGTGAGTATGAGTAGGATAGCAGGGTCAGCACCAGGCAAGGGATCGAGAGATGCAGTTGGTGAGGATTTGATTACCATGACAAAGTGTTGTCTTCAAGGAAGGAATGTTTTGACTCGTGATGGAACAAATGGGTCTAGGAAAATAAGGCGCTTCACTAGTGCCGTGCCCTTAAATGTTGTGCCATCAGCTGGCAATGATTGTTTCAGGCAGTTGGCCAGTTCAGAGACATCTGACCTGGAGTCAACTGTAACATCTCGTATCAAGAGACCTAGGATTGAGGCTAATCATGCTCTTTTGGAAGAAATAAGAGAAATAAGGCAGCGGTTGATCAACACAGTTGTTGATATCAGTGATCAAGATGATGACCCTAGTGCACCTGCTGCTGATGGGGGTAAAGGAACCATTTTCAAGTGCTTTTTTGATGCCGTGGCTTTCGGTCTGGACTTGAAATCGCAGTATGCTTCAGCACAGATGTCACCAATTCATCCATTAAGACTGCTTGTTCCCAGCAATTATCCCAACTGCTCTCCAATACTCTTGGACAAGTTTCCAGTTGAAGTCAGTAAGGAGTATGAAGATCTTTCTGTGAAAGCAAAGTCAAAGTTTAGCATATCTCTACGAAGTATTTCTGAACCCATGTCCCTTGGGGAGATAGCAAGGACCTGGGATGTTTGTGCATGTGCAGTTATTTCCGAGCATGCGCAGCAGAGTGGTGGAGGCAGTTTTAGCTCAAGGTATGGGACATGGGAGAACTGCTTGAGTGCTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KIX_2

Protein Analysis

599

Amino Acids

64.47

Weight (kDa)

7.15

Isoelectric Point (pI)

57.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1411
Acc16I TGCGCA 1 cut(s) 1728
Acc36I ACCTGC 1 cut(s) 1411
AccB1I GGYRCC 1 cut(s) 836
AccB7I CCANNNNNTGG 2 cut(s) 15, 1214
AccII CGCG 1 cut(s) 619
AciI CCGC 3 cut(s) 348, 968, 1348
AclWI GGATC 5 cut(s) 332, 565, 811, 817, 1075
AcoI YGGCCR 1 cut(s) 1239
AcsI RAATTY 5 cut(s) 292, 415, 430, 612, 872
AcuI CTGAAG 3 cut(s) 269, 578, 1473
AfaI GTAC 2 cut(s) 882, 892
AfiI CCNNNNNNNGG 4 cut(s) 15, 143, 1064, 1214
AhdI GACNNNNNGTC 1 cut(s) 1264
AhlI ACTAGT 1 cut(s) 1181
AjnI CCWGG 5 cut(s) 736, 841, 1057, 1260, 1688
AluBI AGCT 8 cut(s) 79, 156, 166, 515, 671, 790, 1214, 1755
AluI AGCT 8 cut(s) 79, 156, 166, 515, 671, 790, 1214, 1755
Alw21I GWGCWC 3 cut(s) 158, 168, 1402
Alw26I GTCTC 4 cut(s) 260, 502, 1244, 1285
Alw44I GTGCAC 1 cut(s) 1398
AlwI GGATC 5 cut(s) 332, 565, 811, 817, 1075
AoxI GGCC 5 cut(s) 20, 89, 329, 520, 1239
ApaLI GTGCAC 1 cut(s) 1398
ApoI RAATTY 5 cut(s) 292, 415, 430, 612, 872
Asp700I GAANNNNTTC 1 cut(s) 1651
AspA2I CCTAGG 1 cut(s) 1295
AspLEI GCGC 2 cut(s) 1176, 1729
AspS9I GGNCC 2 cut(s) 330, 1686
AsuHPI GGTGA 7 cut(s) 150, 291, 389, 621, 982, 1097, 1494
AvaII GGWCC 1 cut(s) 1686
AvrII CCTAGG 1 cut(s) 1295
BaeGI GKGCMC 2 cut(s) 1194, 1402
BaeI ACNNNNGTAYC 2 cut(s) 882, 915
BalI TGGCCA 1 cut(s) 1241
BanI GGYRCC 1 cut(s) 836
BanII GRGCYC 3 cut(s) 42, 158, 168
BauI CACGAG 1 cut(s) 1140
BbsI GAAGAC 2 cut(s) 975, 1109
Bbv12I GWGCWC 3 cut(s) 158, 168, 1402
BccI CCATC 7 cut(s) 546, 709, 712, 733, 1139, 1216, 1406
BceAI ACGGC 2 cut(s) 1172, 1436
BciT130I CCWGG 5 cut(s) 738, 843, 1059, 1262, 1690
BclI TGATCA 2 cut(s) 1353, 1378
BcoDI GTCTC 4 cut(s) 260, 502, 1244, 1285
BcuI ACTAGT 1 cut(s) 1181
BfaI CTAG 7 cut(s) 80, 372, 681, 1161, 1182, 1296, 1395
BfmI CTRYAG 2 cut(s) 74, 516
BfoI RGCGCY 1 cut(s) 1177
BfuAI ACCTGC 1 cut(s) 1411
BglII AGATCT 2 cut(s) 272, 1603
BlnI CCTAGG 1 cut(s) 1295
Bme1390I CCNGG 5 cut(s) 738, 843, 1059, 1262, 1690
Bme18I GGWCC 1 cut(s) 1686
BmeRI GACNNNNNGTC 1 cut(s) 1264
BmgT120I GGNCC 2 cut(s) 330, 1686
BmiI GGNNCC 5 cut(s) 332, 676, 723, 838, 1426
BmrFI CCNGG 5 cut(s) 738, 843, 1059, 1262, 1690
BmsI GCATC 5 cut(s) 40, 106, 611, 1066, 1438
BpiI GAAGAC 2 cut(s) 975, 1109
BplI GAGNNNNNCTC 4 cut(s) 10, 42, 740, 772
BpmI CTGGAG 2 cut(s) 284, 1283
BpuEI CTTGAG 3 cut(s) 12, 152, 1741
Bsa29I ATCGAT 1 cut(s) 977
BsaI GGTCTC 2 cut(s) 260, 1285
BsaJI CCNNGG 8 cut(s) 45, 737, 841, 842, 1295, 1452, 1669, 1689
BsaWI WCCGGW 1 cut(s) 160
Bsc4I CCNNNNNNNGG 4 cut(s) 15, 143, 1064, 1214
Bse1I ACTGG 7 cut(s) 267, 364, 523, 660, 820, 1242, 1577
Bse3DI GCAATG 1 cut(s) 1225
BseBI CCWGG 5 cut(s) 738, 843, 1059, 1262, 1690
BseCI ATCGAT 1 cut(s) 977
BseDI CCNNGG 8 cut(s) 45, 737, 841, 842, 1295, 1452, 1669, 1689
BseGI GGATG 7 cut(s) 55, 121, 602, 696, 725, 1510, 1699
BseLI CCNNNNNNNGG 4 cut(s) 15, 143, 1064, 1214
BseMI GCAATG 1 cut(s) 1225
BseMII CTCAG 4 cut(s) 290, 738, 1017, 1035
BseNI ACTGG 7 cut(s) 267, 364, 523, 660, 820, 1242, 1577
BseRI GAGGAG 2 cut(s) 15, 748
BseSI GKGCMC 2 cut(s) 1194, 1402
BseYI CCCAGC 2 cut(s) 773, 1532
BsgI GTGCAG 1 cut(s) 1728
Bsh1236I CGCG 1 cut(s) 619
BshFI GGCC 5 cut(s) 22, 91, 331, 522, 1241
BshNI GGYRCC 1 cut(s) 836
BshVI ATCGAT 1 cut(s) 977
BsiHKAI GWGCWC 3 cut(s) 158, 168, 1402
BsiSI CCGG 1 cut(s) 161
BslFI GGGAC 3 cut(s) 808, 1651, 1780
BslI CCNNNNNNNGG 4 cut(s) 15, 143, 1064, 1214
BsmAI GTCTC 4 cut(s) 260, 502, 1244, 1285
BsmBI CGTCTC 1 cut(s) 502
BsmFI GGGAC 3 cut(s) 808, 1651, 1780
BsmI GAATGC 1 cut(s) 286
BsnI GGCC 5 cut(s) 22, 91, 331, 522, 1241
Bso31I GGTCTC 2 cut(s) 260, 1285
Bsp1286I GDGCHC 5 cut(s) 42, 158, 168, 1194, 1402
Bsp143I GATC 9 cut(s) 272, 337, 557, 809, 816, 1067, 1353, 1378, 1603
Bsp19I CCATGG 1 cut(s) 45
Bsp68I TCGCGA 1 cut(s) 619
BspACI CCGC 3 cut(s) 348, 968, 1348
BspANI GGCC 5 cut(s) 22, 91, 331, 522, 1241
BspCNI CTCAG 4 cut(s) 289, 739, 1016, 1034
BspDI ATCGAT 1 cut(s) 977
BspFNI CGCG 1 cut(s) 619
BspLI GGNNCC 5 cut(s) 332, 676, 723, 838, 1426
BspMAI CTGCAG 2 cut(s) 78, 520
BspMI ACCTGC 1 cut(s) 1411
BspPI GGATC 5 cut(s) 332, 565, 811, 817, 1075
BspT107I GGYRCC 1 cut(s) 836
BspTNI GGTCTC 2 cut(s) 260, 1285
BsrDI GCAATG 1 cut(s) 1225
BsrI ACTGG 7 cut(s) 267, 364, 523, 660, 820, 1242, 1577
BssECI CCNNGG 8 cut(s) 45, 737, 841, 842, 1295, 1452, 1669, 1689
BssMI GATC 9 cut(s) 272, 337, 557, 809, 816, 1067, 1353, 1378, 1603
BssSI CACGAG 1 cut(s) 1140
BssT1I CCWWGG 3 cut(s) 45, 1295, 1669
Bst2BI CACGAG 1 cut(s) 1140
Bst2UI CCWGG 5 cut(s) 738, 843, 1059, 1262, 1690
Bst4CI ACNGT 5 cut(s) 802, 890, 957, 1273, 1363
Bst6I CTCTTC 1 cut(s) 119
BstAPI GCANNNNNTGC 2 cut(s) 998, 1406
BstC8I GCNNGC 5 cut(s) 55, 520, 867, 1216, 1725
BstDEI CTNAG 4 cut(s) 276, 747, 1003, 1021
BstDSI CCRYGG 2 cut(s) 45, 1452
BstF5I GGATG 7 cut(s) 55, 121, 602, 696, 725, 1510, 1699
BstFNI CGCG 1 cut(s) 619
BstH2I RGCGCY 1 cut(s) 1177
BstHHI GCGC 2 cut(s) 1176, 1729
BstKTI GATC 9 cut(s) 275, 340, 560, 812, 819, 1070, 1356, 1381, 1606
BstMAI GTCTC 4 cut(s) 260, 502, 1244, 1285
BstMBI GATC 9 cut(s) 272, 337, 557, 809, 816, 1067, 1353, 1378, 1603
BstMWI GCNNNNNNNGC 6 cut(s) 998, 1052, 1313, 1406, 1729, 1752
BstNI CCWGG 5 cut(s) 738, 843, 1059, 1262, 1690
BstNSI RCATGY 3 cut(s) 368, 1707, 1727
BstSCI CCNGG 5 cut(s) 736, 841, 1057, 1260, 1688
BstSFI CTRYAG 2 cut(s) 74, 516
BstSLI GKGCMC 2 cut(s) 1194, 1402
BstUI CGCG 1 cut(s) 619
BstV2I GAAGAC 2 cut(s) 975, 1109
BstX2I RGATCY 4 cut(s) 272, 557, 816, 1603
BstYI RGATCY 4 cut(s) 272, 557, 816, 1603
Bsu15I ATCGAT 1 cut(s) 977
BsuRI GGCC 5 cut(s) 22, 91, 331, 522, 1241
BsuTUI ATCGAT 1 cut(s) 977
BtgI CCRYGG 2 cut(s) 45, 1452
BtsCI GGATG 7 cut(s) 55, 121, 602, 696, 725, 1510, 1699
BtsIMutI CAGTG 4 cut(s) 260, 530, 1015, 1381
BtuMI TCGCGA 1 cut(s) 619
BveI ACCTGC 1 cut(s) 1411
Cac8I GCNNGC 5 cut(s) 55, 520, 867, 1216, 1725
CfoI GCGC 2 cut(s) 1176, 1729
Cfr13I GGNCC 2 cut(s) 330, 1686
ClaI ATCGAT 1 cut(s) 977
Csp6I GTAC 2 cut(s) 881, 891
CviQI GTAC 2 cut(s) 881, 891
DdeI CTNAG 4 cut(s) 276, 747, 1003, 1021
DpnI GATC 9 cut(s) 274, 339, 559, 811, 818, 1069, 1355, 1380, 1605
DpnII GATC 9 cut(s) 272, 337, 557, 809, 816, 1067, 1353, 1378, 1603
DriI GACNNNNNGTC 1 cut(s) 1264
EaeI YGGCCR 1 cut(s) 1239
Eam1104I CTCTTC 1 cut(s) 119
Eam1105I GACNNNNNGTC 1 cut(s) 1264
EarI CTCTTC 1 cut(s) 119
Ecl136II GAGCTC 2 cut(s) 156, 166
Eco130I CCWWGG 3 cut(s) 45, 1295, 1669
Eco147I AGGCCT 1 cut(s) 22
Eco24I GRGCYC 3 cut(s) 42, 158, 168
Eco31I GGTCTC 2 cut(s) 260, 1285
Eco32I GATATC 2 cut(s) 849, 1372
Eco47I GGWCC 1 cut(s) 1686
Eco53kI GAGCTC 2 cut(s) 156, 166
Eco57I CTGAAG 3 cut(s) 269, 578, 1473
EcoICRI GAGCTC 2 cut(s) 156, 166
EcoO109I RGGNCCY 2 cut(s) 330, 1686
EcoRI GAATTC 1 cut(s) 415
EcoRII CCWGG 5 cut(s) 736, 841, 1057, 1260, 1688
EcoRV GATATC 2 cut(s) 849, 1372
EcoT14I CCWWGG 3 cut(s) 45, 1295, 1669
EcoT22I ATGCAT 2 cut(s) 121, 994
EcoT38I GRGCYC 3 cut(s) 42, 158, 168
ErhI CCWWGG 3 cut(s) 45, 1295, 1669
Esp3I CGTCTC 1 cut(s) 502
FaqI GGGAC 3 cut(s) 808, 1651, 1780
FbaI TGATCA 2 cut(s) 1353, 1378
FokI GGATG 7 cut(s) 62, 128, 589, 683, 712, 1497, 1706
FriOI GRGCYC 3 cut(s) 42, 158, 168
FspBI CTAG 7 cut(s) 80, 372, 681, 1161, 1182, 1296, 1395
FspI TGCGCA 1 cut(s) 1728
GlaI GCGC 2 cut(s) 1175, 1728
GsaI CCCAGC 2 cut(s) 777, 1536
GsuI CTGGAG 2 cut(s) 284, 1283
HaeII RGCGCY 1 cut(s) 1177
HaeIII GGCC 5 cut(s) 22, 91, 331, 522, 1241
HapII CCGG 1 cut(s) 161
HhaI GCGC 2 cut(s) 1176, 1729
Hin6I GCGC 2 cut(s) 1174, 1727
HinP1I GCGC 2 cut(s) 1174, 1727
HincII GTYRAC 4 cut(s) 71, 103, 912, 1269
HindII GTYRAC 4 cut(s) 71, 103, 912, 1269
HinfI GANTC 8 cut(s) 67, 83, 221, 344, 649, 743, 1138, 1265
HpaII CCGG 1 cut(s) 161
HphI GGTGA 7 cut(s) 150, 291, 389, 621, 982, 1097, 1494
Hpy166II GTNNAC 6 cut(s) 71, 103, 881, 912, 1269, 1400
Hpy8I GTNNAC 6 cut(s) 71, 103, 881, 912, 1269, 1400
HpyAV CCTTC 3 cut(s) 602, 717, 1119
HpyCH4III ACNGT 5 cut(s) 802, 890, 957, 1273, 1363
HpyF10VI GCNNNNNNNGC 6 cut(s) 998, 1052, 1313, 1406, 1729, 1752
HpyF3I CTNAG 4 cut(s) 276, 747, 1003, 1021
HspAI GCGC 2 cut(s) 1174, 1727
Ksp22I TGATCA 2 cut(s) 1353, 1378
Kzo9I GATC 9 cut(s) 272, 337, 557, 809, 816, 1067, 1353, 1378, 1603
LmnI GCTCC 3 cut(s) 163, 472, 727
LweI GCATC 5 cut(s) 40, 106, 611, 1066, 1438
MaeI CTAG 7 cut(s) 80, 372, 681, 1161, 1182, 1296, 1395
MaeIII GTNAC 4 cut(s) 934, 1010, 1273, 1500
MalI GATC 9 cut(s) 274, 339, 559, 811, 818, 1069, 1355, 1380, 1605
MboI GATC 9 cut(s) 272, 337, 557, 809, 816, 1067, 1353, 1378, 1603
MboII GAAGA 9 cut(s) 136, 262, 288, 618, 790, 975, 1109, 1337, 1613
MfeI CAATTG 2 cut(s) 58, 545
MflI RGATCY 4 cut(s) 272, 557, 816, 1603
MhlI GDGCHC 5 cut(s) 42, 158, 168, 1194, 1402
MlsI TGGCCA 1 cut(s) 1241
MluNI TGGCCA 1 cut(s) 1241
MlyI GAGTC 5 cut(s) 76, 92, 230, 1132, 1274
MmeI TCCRAC 2 cut(s) 204, 787
Mox20I TGGCCA 1 cut(s) 1241
Mph1103I ATGCAT 2 cut(s) 121, 994
MroXI GAANNNNTTC 1 cut(s) 1651
MscI TGGCCA 1 cut(s) 1241
MseI TTAA 6 cut(s) 306, 500, 900, 963, 1196, 1517
MslI CAYNNNNRTG 2 cut(s) 110, 900
Msp20I TGGCCA 1 cut(s) 1241
MspA1I CMGCKG 2 cut(s) 1214, 1348
MspI CCGG 1 cut(s) 161
MspR9I CCNGG 5 cut(s) 738, 843, 1059, 1262, 1690
MunI CAATTG 2 cut(s) 58, 545
Mva1269I GAATGC 1 cut(s) 286
MvaI CCWGG 5 cut(s) 738, 843, 1059, 1262, 1690
MvnI CGCG 1 cut(s) 619
MwoI GCNNNNNNNGC 6 cut(s) 998, 1052, 1313, 1406, 1729, 1752
NcoI CCATGG 1 cut(s) 45
NdeII GATC 9 cut(s) 272, 337, 557, 809, 816, 1067, 1353, 1378, 1603
NlaIV GGNNCC 5 cut(s) 332, 676, 723, 838, 1426
NmuCI GTSAC 2 cut(s) 1010, 1500
NruI TCGCGA 1 cut(s) 619
NsbI TGCGCA 1 cut(s) 1728
NsiI ATGCAT 2 cut(s) 121, 994
NspI RCATGY 3 cut(s) 368, 1707, 1727
PaeI GCATGC 1 cut(s) 1727
PaqCI CACCTGC 1 cut(s) 1411
PasI CCCWGGG 1 cut(s) 842
PceI AGGCCT 1 cut(s) 22
PctI GAATGC 1 cut(s) 286
PdmI GAANNNNTTC 1 cut(s) 1651
PfeI GAWTC 3 cut(s) 344, 649, 743
PflMI CCANNNNNTGG 2 cut(s) 15, 1214
PleI GAGTC 5 cut(s) 75, 91, 229, 1132, 1273
PpsI GAGTC 5 cut(s) 75, 91, 229, 1132, 1273
PpuMI RGGWCCY 1 cut(s) 1686
Psp124BI GAGCTC 2 cut(s) 158, 168
Psp5II RGGWCCY 1 cut(s) 1686
Psp6I CCWGG 5 cut(s) 736, 841, 1057, 1260, 1688
PspFI CCCAGC 2 cut(s) 773, 1532
PspGI CCWGG 5 cut(s) 736, 841, 1057, 1260, 1688
PspN4I GGNNCC 5 cut(s) 332, 676, 723, 838, 1426
PspPI GGNCC 2 cut(s) 330, 1686
PspPPI RGGWCCY 1 cut(s) 1686
PstI CTGCAG 2 cut(s) 78, 520
PsuI RGATCY 4 cut(s) 272, 557, 816, 1603
PvuII CAGCTG 1 cut(s) 1214
RruI TCGCGA 1 cut(s) 619
RsaI GTAC 2 cut(s) 882, 892
RsaNI GTAC 2 cut(s) 881, 891
RseI CAYNNNNRTG 2 cut(s) 110, 900
SacI GAGCTC 2 cut(s) 158, 168
SaqAI TTAA 6 cut(s) 306, 500, 900, 963, 1196, 1517
Sau3AI GATC 9 cut(s) 272, 337, 557, 809, 816, 1067, 1353, 1378, 1603
Sau96I GGNCC 2 cut(s) 330, 1686
SchI GAGTC 5 cut(s) 76, 92, 230, 1132, 1274
ScrFI CCNGG 5 cut(s) 738, 843, 1059, 1262, 1690
SduI GDGCHC 5 cut(s) 42, 158, 168, 1194, 1402
SfaNI GCATC 5 cut(s) 40, 106, 611, 1066, 1438
SfcI CTRYAG 2 cut(s) 74, 516
SinI GGWCC 1 cut(s) 1686
SmiMI CAYNNNNRTG 2 cut(s) 110, 900
SmlI CTYRAG 4 cut(s) 27, 167, 1756, 1783
SmoI CTYRAG 4 cut(s) 27, 167, 1756, 1783
SpeI ACTAGT 1 cut(s) 1181
SphI GCATGC 1 cut(s) 1727
SseBI AGGCCT 1 cut(s) 22
SsiI CCGC 3 cut(s) 348, 968, 1348
SspMI CTAG 7 cut(s) 80, 372, 681, 1161, 1182, 1296, 1395
SstI GAGCTC 2 cut(s) 158, 168
StuI AGGCCT 1 cut(s) 22
StyD4I CCNGG 5 cut(s) 736, 841, 1057, 1260, 1688
StyI CCWWGG 3 cut(s) 45, 1295, 1669
TaaI ACNGT 5 cut(s) 802, 890, 957, 1273, 1363
TaqI TCGA 2 cut(s) 977, 1070
TaqII GACCGA 1 cut(s) 1451
TfiI GAWTC 3 cut(s) 344, 649, 743
Tru1I TTAA 6 cut(s) 306, 500, 900, 963, 1196, 1517
Tru9I TTAA 6 cut(s) 306, 500, 900, 963, 1196, 1517
TscAI CASTG 4 cut(s) 267, 530, 1015, 1381
TseFI GTSAC 2 cut(s) 1010, 1500
Tsp45I GTSAC 2 cut(s) 1010, 1500
TspDTI ATGAA 4 cut(s) 428, 564, 1499, 1614
TspRI CASTG 4 cut(s) 267, 530, 1015, 1381
Van91I CCANNNNNTGG 2 cut(s) 15, 1214
VneI GTGCAC 1 cut(s) 1398
VpaK11BI GGWCC 1 cut(s) 1686
XapI RAATTY 5 cut(s) 292, 415, 430, 612, 872
XceI RCATGY 3 cut(s) 368, 1707, 1727
XmaJI CCTAGG 1 cut(s) 1295
XmnI GAANNNNTTC 1 cut(s) 1651
XspI CTAG 7 cut(s) 80, 372, 681, 1161, 1182, 1296, 1395
Zsp2I ATGCAT 2 cut(s) 121, 994
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.