Mediator of RNA polymerase II transcription subunit 15a-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 712, 1957 |
| AccB1I | GGYRCC | 1 cut(s) | 508 |
| AccBSI | CCGCTC | 1 cut(s) | 3392 |
| AccI | GTMKAC | 2 cut(s) | 413, 1383 |
| AccIII | TCCGGA | 1 cut(s) | 3327 |
| AciI | CCGC | 4 cut(s) | 1082, 1963, 2001, 3392 |
| AclWI | GGATC | 4 cut(s) | 807, 1974, 1987, 2495 |
| AcoI | YGGCCR | 1 cut(s) | 3153 |
| AcsI | RAATTY | 9 cut(s) | 463, 490, 1641, 1915, 1945, 2277, 2301, 2400, 2945 |
| AcuI | CTGAAG | 3 cut(s) | 1185, 3191, 3418 |
| AdeI | CACNNNGTG | 1 cut(s) | 2269 |
| AfeI | AGCGCT | 1 cut(s) | 2660 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 15, 572, 1148, 1220, 2000, 3132 |
| AflII | CTTAAG | 1 cut(s) | 76 |
| AflIII | ACRYGT | 2 cut(s) | 769, 1659 |
| AgsI | TTSAA | 9 cut(s) | 311, 1059, 1418, 1492, 1546, 1629, 2481, 2613, 3189 |
| AhlI | ACTAGT | 1 cut(s) | 2191 |
| AjnI | CCWGG | 5 cut(s) | 277, 973, 1003, 2551, 2843 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2936, 2968 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 13, 45 |
| Alw21I | GWGCWC | 6 cut(s) | 549, 1722, 2217, 2521, 3140, 3236 |
| Alw26I | GTCTC | 7 cut(s) | 330, 532, 547, 881, 1248, 1504, 1869 |
| Alw44I | GTGCAC | 3 cut(s) | 1718, 2213, 2517 |
| AlwI | GGATC | 4 cut(s) | 807, 1974, 1987, 2495 |
| Ama87I | CYCGRG | 4 cut(s) | 42, 432, 1247, 3387 |
| Aor13HI | TCCGGA | 1 cut(s) | 3327 |
| Aor51HI | AGCGCT | 1 cut(s) | 2660 |
| AoxI | GGCC | 5 cut(s) | 292, 755, 1006, 2984, 3153 |
| ApaLI | GTGCAC | 3 cut(s) | 1718, 2213, 2517 |
| ApoI | RAATTY | 9 cut(s) | 463, 490, 1641, 1915, 1945, 2277, 2301, 2400, 2945 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 3290, 3322, 3328, 3360 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1704 |
| AspA2I | CCTAGG | 1 cut(s) | 2987 |
| AspLEI | GCGC | 3 cut(s) | 1158, 2661, 3386 |
| AspS9I | GGNCC | 1 cut(s) | 2756 |
| AsuHPI | GGTGA | 7 cut(s) | 555, 936, 2559, 2686, 3010, 3128, 3313 |
| AsuII | TTCGAA | 2 cut(s) | 1462, 2167 |
| AvaI | CYCGRG | 4 cut(s) | 42, 432, 1247, 3387 |
| AvaII | GGWCC | 1 cut(s) | 2756 |
| AvrII | CCTAGG | 1 cut(s) | 2987 |
| AxyI | CCTNAGG | 2 cut(s) | 1975, 2016 |
| BaeGI | GKGCMC | 6 cut(s) | 511, 1587, 1722, 2217, 2274, 2521 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 662, 695 |
| BalI | TGGCCA | 1 cut(s) | 3155 |
| BamHI | GGATCC | 1 cut(s) | 1979 |
| BanI | GGYRCC | 1 cut(s) | 508 |
| BanII | GRGCYC | 1 cut(s) | 9 |
| BbsI | GAAGAC | 3 cut(s) | 801, 3081, 3465 |
| Bbv12I | GWGCWC | 6 cut(s) | 549, 1722, 2217, 2521, 3140, 3236 |
| BbvCI | CCTCAGC | 1 cut(s) | 3097 |
| BccI | CCATC | 8 cut(s) | 100, 652, 958, 1487, 2536, 2762, 3134, 3164 |
| BceAI | ACGGC | 1 cut(s) | 770 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2147, 2181 |
| BciT130I | CCWGG | 5 cut(s) | 279, 975, 1005, 2553, 2845 |
| BciVI | GTATCC | 2 cut(s) | 1393, 2385 |
| BclI | TGATCA | 1 cut(s) | 2178 |
| BcoDI | GTCTC | 7 cut(s) | 330, 532, 547, 881, 1248, 1504, 1869 |
| BcuI | ACTAGT | 1 cut(s) | 2191 |
| BfoI | RGCGCY | 1 cut(s) | 2662 |
| BfrI | CTTAAG | 1 cut(s) | 76 |
| BfuAI | ACCTGC | 2 cut(s) | 712, 1957 |
| BfuI | GTATCC | 2 cut(s) | 1393, 2385 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3392 |
| BglII | AGATCT | 2 cut(s) | 2774, 3286 |
| BlnI | CCTAGG | 1 cut(s) | 2987 |
| BmcAI | AGTACT | 3 cut(s) | 2312, 2494, 3057 |
| Bme1390I | CCNGG | 5 cut(s) | 279, 975, 1005, 2553, 2845 |
| Bme18I | GGWCC | 1 cut(s) | 2756 |
| BmeT110I | CYCGRG | 4 cut(s) | 42, 432, 1247, 3387 |
| BmgT120I | GGNCC | 1 cut(s) | 2756 |
| BmiI | GGNNCC | 9 cut(s) | 6, 225, 438, 510, 1981, 2415, 2725, 3124, 3342 |
| BmrFI | CCNGG | 5 cut(s) | 279, 975, 1005, 2553, 2845 |
| BmsI | GCATC | 9 cut(s) | 383, 410, 869, 1275, 1582, 1885, 2230, 2435, 2573 |
| BpiI | GAAGAC | 3 cut(s) | 801, 3081, 3465 |
| BpmI | CTGGAG | 3 cut(s) | 1851, 2268, 2517 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1147, 3097 |
| Bpu14I | TTCGAA | 2 cut(s) | 1462, 2167 |
| BpuEI | CTTGAG | 2 cut(s) | 312, 1746 |
| BsaAI | YACGTR | 1 cut(s) | 1662 |
| BsaBI | GATNNNNATC | 1 cut(s) | 900 |
| BsaI | GGTCTC | 1 cut(s) | 1869 |
| BsaJI | CCNNGG | 4 cut(s) | 2418, 2552, 2987, 3352 |
| BsaWI | WCCGGW | 1 cut(s) | 3327 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 15, 572, 1148, 1220, 2000, 3132 |
| Bse118I | RCCGGY | 2 cut(s) | 2131, 2230 |
| Bse1I | ACTGG | 3 cut(s) | 1394, 2500, 3063 |
| Bse21I | CCTNAGG | 2 cut(s) | 1975, 2016 |
| Bse3DI | GCAATG | 7 cut(s) | 225, 347, 369, 942, 1796, 1840, 3144 |
| Bse8I | GATNNNNATC | 1 cut(s) | 900 |
| BseAI | TCCGGA | 1 cut(s) | 3327 |
| BseBI | CCWGG | 5 cut(s) | 279, 975, 1005, 2553, 2845 |
| BseDI | CCNNGG | 4 cut(s) | 2418, 2552, 2987, 3352 |
| BseGI | GGATG | 6 cut(s) | 847, 1479, 1876, 2471, 2562, 3382 |
| BseJI | GATNNNNATC | 1 cut(s) | 900 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 15, 572, 1148, 1220, 2000, 3132 |
| BseMI | GCAATG | 7 cut(s) | 225, 347, 369, 942, 1796, 1840, 3144 |
| BseNI | ACTGG | 3 cut(s) | 1394, 2500, 3063 |
| BseRI | GAGGAG | 1 cut(s) | 1749 |
| BseSI | GKGCMC | 6 cut(s) | 511, 1587, 1722, 2217, 2274, 2521 |
| BseYI | CCCAGC | 2 cut(s) | 657, 2486 |
| BsgI | GTGCAG | 1 cut(s) | 390 |
| Bsh1285I | CGRYCG | 1 cut(s) | 413 |
| BshFI | GGCC | 5 cut(s) | 294, 757, 1008, 2986, 3155 |
| BshNI | GGYRCC | 1 cut(s) | 508 |
| BsiEI | CGRYCG | 1 cut(s) | 413 |
| BsiHKAI | GWGCWC | 6 cut(s) | 549, 1722, 2217, 2521, 3140, 3236 |
| BsiHKCI | CYCGRG | 4 cut(s) | 42, 432, 1247, 3387 |
| BsiSI | CCGG | 3 cut(s) | 2132, 2231, 3328 |
| BslFI | GGGAC | 1 cut(s) | 3334 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 15, 572, 1148, 1220, 2000, 3132 |
| BsmAI | GTCTC | 7 cut(s) | 330, 532, 547, 881, 1248, 1504, 1869 |
| BsmBI | CGTCTC | 1 cut(s) | 1504 |
| BsmFI | GGGAC | 1 cut(s) | 3334 |
| BsmI | GAATGC | 1 cut(s) | 2595 |
| BsnI | GGCC | 5 cut(s) | 294, 757, 1008, 2986, 3155 |
| Bso31I | GGTCTC | 1 cut(s) | 1869 |
| BsoBI | CYCGRG | 4 cut(s) | 42, 432, 1247, 3387 |
| Bsp119I | TTCGAA | 2 cut(s) | 1462, 2167 |
| Bsp13I | TCCGGA | 1 cut(s) | 3327 |
| Bsp1407I | TGTACA | 3 cut(s) | 1021, 2137, 2735 |
| BspACI | CCGC | 4 cut(s) | 1082, 1963, 2001, 3392 |
| BspANI | GGCC | 5 cut(s) | 294, 757, 1008, 2986, 3155 |
| BspEI | TCCGGA | 1 cut(s) | 3327 |
| BspHI | TCATGA | 2 cut(s) | 1069, 2224 |
| BspLI | GGNNCC | 9 cut(s) | 6, 225, 438, 510, 1981, 2415, 2725, 3124, 3342 |
| BspMAI | CTGCAG | 5 cut(s) | 37, 1695, 1960, 2244, 2888 |
| BspMI | ACCTGC | 2 cut(s) | 712, 1957 |
| BspPI | GGATC | 4 cut(s) | 807, 1974, 1987, 2495 |
| BspQI | GCTCTTC | 1 cut(s) | 2121 |
| BspT104I | TTCGAA | 2 cut(s) | 1462, 2167 |
| BspT107I | GGYRCC | 1 cut(s) | 508 |
| BspTI | CTTAAG | 1 cut(s) | 76 |
| BspTNI | GGTCTC | 1 cut(s) | 1869 |
| BsrBI | CCGCTC | 1 cut(s) | 3392 |
| BsrDI | GCAATG | 7 cut(s) | 225, 347, 369, 942, 1796, 1840, 3144 |
| BsrFI | RCCGGY | 2 cut(s) | 2131, 2230 |
| BsrGI | TGTACA | 3 cut(s) | 1021, 2137, 2735 |
| BsrI | ACTGG | 3 cut(s) | 1394, 2500, 3063 |
| BssAI | RCCGGY | 2 cut(s) | 2131, 2230 |
| BssECI | CCNNGG | 4 cut(s) | 2418, 2552, 2987, 3352 |
| BssT1I | CCWWGG | 3 cut(s) | 2418, 2987, 3352 |
| Bst2UI | CCWGG | 5 cut(s) | 279, 975, 1005, 2553, 2845 |
| Bst6I | CTCTTC | 3 cut(s) | 2121, 2320, 2574 |
| BstAFI | CTTAAG | 1 cut(s) | 76 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 773, 1645, 1726, 2194 |
| BstAUI | TGTACA | 3 cut(s) | 1021, 2137, 2735 |
| BstBAI | YACGTR | 1 cut(s) | 1662 |
| BstBI | TTCGAA | 2 cut(s) | 1462, 2167 |
| BstC8I | GCNNGC | 4 cut(s) | 980, 1118, 1154, 2133 |
| BstEII | GGTNACC | 1 cut(s) | 999 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1146 |
| BstF5I | GGATG | 6 cut(s) | 847, 1479, 1876, 2471, 2562, 3382 |
| BstH2I | RGCGCY | 1 cut(s) | 2662 |
| BstHHI | GCGC | 3 cut(s) | 1158, 2661, 3386 |
| BstMAI | GTCTC | 7 cut(s) | 330, 532, 547, 881, 1248, 1504, 1869 |
| BstMCI | CGRYCG | 1 cut(s) | 413 |
| BstNI | CCWGG | 5 cut(s) | 279, 975, 1005, 2553, 2845 |
| BstNSI | RCATGY | 3 cut(s) | 773, 1156, 2909 |
| BstPI | GGTNACC | 1 cut(s) | 999 |
| BstSCI | CCNGG | 5 cut(s) | 277, 973, 1003, 2551, 2843 |
| BstSLI | GKGCMC | 6 cut(s) | 511, 1587, 1722, 2217, 2274, 2521 |
| BstV2I | GAAGAC | 3 cut(s) | 801, 3081, 3465 |
| BstX2I | RGATCY | 4 cut(s) | 1979, 2500, 2774, 3286 |
| BstYI | RGATCY | 4 cut(s) | 1979, 2500, 2774, 3286 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1975, 2016 |
| BsuI | GTATCC | 2 cut(s) | 1393, 2385 |
| BsuRI | GGCC | 5 cut(s) | 294, 757, 1008, 2986, 3155 |
| BtgZI | GCGATG | 1 cut(s) | 2514 |
| BtsCI | GGATG | 6 cut(s) | 847, 1479, 1876, 2471, 2562, 3382 |
| BtsI | GCAGTG | 4 cut(s) | 1194, 1688, 1823, 1965 |
| BveI | ACCTGC | 2 cut(s) | 712, 1957 |
| Cac8I | GCNNGC | 4 cut(s) | 980, 1118, 1154, 2133 |
| CciI | TCATGA | 2 cut(s) | 1069, 2224 |
| CfoI | GCGC | 3 cut(s) | 1158, 2661, 3386 |
| Cfr10I | RCCGGY | 2 cut(s) | 2131, 2230 |
| Cfr13I | GGNCC | 1 cut(s) | 2756 |
| CseI | GACGC | 1 cut(s) | 1718 |
| DraI | TTTAAA | 3 cut(s) | 1171, 1425, 2067 |
| DraIII | CACNNNGTG | 1 cut(s) | 2269 |
| EaeI | YGGCCR | 1 cut(s) | 3153 |
| Eam1104I | CTCTTC | 3 cut(s) | 2121, 2320, 2574 |
| EarI | CTCTTC | 3 cut(s) | 2121, 2320, 2574 |
| EciI | GGCGGA | 1 cut(s) | 1097 |
| Eco130I | CCWWGG | 3 cut(s) | 2418, 2987, 3352 |
| Eco147I | AGGCCT | 1 cut(s) | 2986 |
| Eco24I | GRGCYC | 1 cut(s) | 9 |
| Eco31I | GGTCTC | 1 cut(s) | 1869 |
| Eco32I | GATATC | 1 cut(s) | 3064 |
| Eco47I | GGWCC | 1 cut(s) | 2756 |
| Eco47III | AGCGCT | 1 cut(s) | 2660 |
| Eco57I | CTGAAG | 3 cut(s) | 1185, 3191, 3418 |
| Eco81I | CCTNAGG | 2 cut(s) | 1975, 2016 |
| Eco88I | CYCGRG | 4 cut(s) | 42, 432, 1247, 3387 |
| Eco91I | GGTNACC | 1 cut(s) | 999 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1146 |
| EcoO65I | GGTNACC | 1 cut(s) | 999 |
| EcoRII | CCWGG | 5 cut(s) | 277, 973, 1003, 2551, 2843 |
| EcoRV | GATATC | 1 cut(s) | 3064 |
| EcoT14I | CCWWGG | 3 cut(s) | 2418, 2987, 3352 |
| EcoT22I | ATGCAT | 1 cut(s) | 2907 |
| EcoT38I | GRGCYC | 1 cut(s) | 9 |
| ErhI | CCWWGG | 3 cut(s) | 2418, 2987, 3352 |
| Esp3I | CGTCTC | 1 cut(s) | 1504 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 3450 |
| FaqI | GGGAC | 1 cut(s) | 3334 |
| FbaI | TGATCA | 1 cut(s) | 2178 |
| FblI | GTMKAC | 2 cut(s) | 413, 1383 |
| FokI | GGATG | 6 cut(s) | 834, 1466, 1863, 2458, 2569, 3389 |
| FriOI | GRGCYC | 1 cut(s) | 9 |
| GlaI | GCGC | 3 cut(s) | 1157, 2660, 3385 |
| GsaI | CCCAGC | 2 cut(s) | 661, 2490 |
| GsuI | CTGGAG | 3 cut(s) | 1851, 2268, 2517 |
| HaeII | RGCGCY | 1 cut(s) | 2662 |
| HaeIII | GGCC | 5 cut(s) | 294, 757, 1008, 2986, 3155 |
| HapII | CCGG | 3 cut(s) | 2132, 2231, 3328 |
| HgaI | GACGC | 1 cut(s) | 1718 |
| HhaI | GCGC | 3 cut(s) | 1158, 2661, 3386 |
| Hin6I | GCGC | 3 cut(s) | 1156, 2659, 3384 |
| HinP1I | GCGC | 3 cut(s) | 1156, 2659, 3384 |
| HincII | GTYRAC | 5 cut(s) | 414, 1226, 1557, 1953, 2634 |
| HindII | GTYRAC | 5 cut(s) | 414, 1226, 1557, 1953, 2634 |
| HindIII | AAGCTT | 1 cut(s) | 3430 |
| HpaII | CCGG | 3 cut(s) | 2132, 2231, 3328 |
| HphI | GGTGA | 7 cut(s) | 555, 936, 2559, 2686, 3010, 3128, 3313 |
| Hpy99I | CGWCG | 1 cut(s) | 14 |
| HpyCH4IV | ACGT | 2 cut(s) | 1352, 1661 |
| HpySE526I | ACGT | 2 cut(s) | 1352, 1661 |
| HspAI | GCGC | 3 cut(s) | 1156, 2659, 3384 |
| Kpn2I | TCCGGA | 1 cut(s) | 3327 |
| KroI | GCCGGC | 1 cut(s) | 2131 |
| KroNI | GCCGGC | 1 cut(s) | 2133 |
| Ksp22I | TGATCA | 1 cut(s) | 2178 |
| LguI | GCTCTTC | 1 cut(s) | 2121 |
| LmnI | GCTCC | 8 cut(s) | 4, 544, 781, 2185, 2249, 3143, 3239, 3330 |
| LweI | GCATC | 9 cut(s) | 383, 410, 869, 1275, 1582, 1885, 2230, 2435, 2573 |
| MaeII | ACGT | 2 cut(s) | 1352, 1661 |
| MaeIII | GTNAC | 7 cut(s) | 999, 1230, 1348, 1468, 2031, 2603, 3091 |
| MbiI | CCGCTC | 1 cut(s) | 3392 |
| MfeI | CAATTG | 2 cut(s) | 300, 1076 |
| MflI | RGATCY | 4 cut(s) | 1979, 2500, 2774, 3286 |
| MlsI | TGGCCA | 1 cut(s) | 3155 |
| MluNI | TGGCCA | 1 cut(s) | 3155 |
| MlyI | GAGTC | 4 cut(s) | 95, 883, 1527, 2137 |
| MmeI | TCCRAC | 5 cut(s) | 192, 1328, 1904, 2888, 3110 |
| Mox20I | TGGCCA | 1 cut(s) | 3155 |
| Mph1103I | ATGCAT | 1 cut(s) | 2907 |
| MroI | TCCGGA | 1 cut(s) | 3327 |
| MroNI | GCCGGC | 1 cut(s) | 2131 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1704 |
| MscI | TGGCCA | 1 cut(s) | 3155 |
| MslI | CAYNNNNRTG | 6 cut(s) | 646, 906, 1578, 1662, 2180, 3149 |
| Msp20I | TGGCCA | 1 cut(s) | 3155 |
| MspA1I | CMGCKG | 2 cut(s) | 1123, 1294 |
| MspCI | CTTAAG | 1 cut(s) | 76 |
| MspI | CCGG | 3 cut(s) | 2132, 2231, 3328 |
| MspR9I | CCNGG | 5 cut(s) | 279, 975, 1005, 2553, 2845 |
| MunI | CAATTG | 2 cut(s) | 300, 1076 |
| Mva1269I | GAATGC | 1 cut(s) | 2595 |
| MvaI | CCWGG | 5 cut(s) | 279, 975, 1005, 2553, 2845 |
| NaeI | GCCGGC | 1 cut(s) | 2133 |
| NgoMIV | GCCGGC | 1 cut(s) | 2131 |
| NlaIV | GGNNCC | 9 cut(s) | 6, 225, 438, 510, 1981, 2415, 2725, 3124, 3342 |
| NmuCI | GTSAC | 3 cut(s) | 1230, 1468, 2031 |
| NsiI | ATGCAT | 1 cut(s) | 2907 |
| NspI | RCATGY | 3 cut(s) | 773, 1156, 2909 |
| NspV | TTCGAA | 2 cut(s) | 1462, 2167 |
| PaeI | GCATGC | 1 cut(s) | 1156 |
| PaeR7I | CTCGAG | 2 cut(s) | 42, 1247 |
| PagI | TCATGA | 2 cut(s) | 1069, 2224 |
| PceI | AGGCCT | 1 cut(s) | 2986 |
| PciI | ACATGT | 1 cut(s) | 769 |
| PciSI | GCTCTTC | 1 cut(s) | 2121 |
| PctI | GAATGC | 1 cut(s) | 2595 |
| PdiI | GCCGGC | 1 cut(s) | 2133 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1704 |
| PfeI | GAWTC | 9 cut(s) | 38, 274, 844, 1051, 1618, 2078, 2444, 2957, 3001 |
| PflFI | GACNNNGTC | 1 cut(s) | 2029 |
| PleI | GAGTC | 4 cut(s) | 95, 883, 1526, 2137 |
| PpsI | GAGTC | 4 cut(s) | 95, 883, 1526, 2137 |
| Ppu21I | YACGTR | 1 cut(s) | 1662 |
| PscI | ACATGT | 1 cut(s) | 769 |
| Psp6I | CCWGG | 5 cut(s) | 277, 973, 1003, 2551, 2843 |
| PspEI | GGTNACC | 1 cut(s) | 999 |
| PspFI | CCCAGC | 2 cut(s) | 657, 2486 |
| PspGI | CCWGG | 5 cut(s) | 277, 973, 1003, 2551, 2843 |
| PspN4I | GGNNCC | 9 cut(s) | 6, 225, 438, 510, 1981, 2415, 2725, 3124, 3342 |
| PspPI | GGNCC | 1 cut(s) | 2756 |
| PstI | CTGCAG | 5 cut(s) | 37, 1695, 1960, 2244, 2888 |
| PsuI | RGATCY | 4 cut(s) | 1979, 2500, 2774, 3286 |
| PsyI | GACNNNGTC | 1 cut(s) | 2029 |
| PvuII | CAGCTG | 2 cut(s) | 1123, 1294 |
| RseI | CAYNNNNRTG | 6 cut(s) | 646, 906, 1578, 1662, 2180, 3149 |
| SalI | GTCGAC | 1 cut(s) | 412 |
| SapI | GCTCTTC | 1 cut(s) | 2121 |
| Sau96I | GGNCC | 1 cut(s) | 2756 |
| ScaI | AGTACT | 3 cut(s) | 2312, 2494, 3057 |
| SchI | GAGTC | 4 cut(s) | 95, 883, 1527, 2137 |
| ScrFI | CCNGG | 5 cut(s) | 279, 975, 1005, 2553, 2845 |
| SfaNI | GCATC | 9 cut(s) | 383, 410, 869, 1275, 1582, 1885, 2230, 2435, 2573 |
| Sfr274I | CTCGAG | 2 cut(s) | 42, 1247 |
| SfuI | TTCGAA | 2 cut(s) | 1462, 2167 |
| SinI | GGWCC | 1 cut(s) | 2756 |
| SlaI | CTCGAG | 2 cut(s) | 42, 1247 |
| SmiI | ATTTAAAT | 1 cut(s) | 2067 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 646, 906, 1578, 1662, 2180, 3149 |
| SmlI | CTYRAG | 5 cut(s) | 42, 76, 327, 1247, 1761 |
| SmoI | CTYRAG | 5 cut(s) | 42, 76, 327, 1247, 1761 |
| SpeI | ACTAGT | 1 cut(s) | 2191 |
| SphI | GCATGC | 1 cut(s) | 1156 |
| SseBI | AGGCCT | 1 cut(s) | 2986 |
| SsiI | CCGC | 4 cut(s) | 1082, 1963, 2001, 3392 |
| SspI | AATATT | 4 cut(s) | 133, 1096, 1931, 2751 |
| StuI | AGGCCT | 1 cut(s) | 2986 |
| StyD4I | CCNGG | 5 cut(s) | 277, 973, 1003, 2551, 2843 |
| StyI | CCWWGG | 3 cut(s) | 2418, 2987, 3352 |
| SwaI | ATTTAAAT | 1 cut(s) | 2067 |
| TaiI | ACGT | 2 cut(s) | 1355, 1664 |
| TauI | GCSGC | 2 cut(s) | 1966, 3395 |
| TfiI | GAWTC | 9 cut(s) | 38, 274, 844, 1051, 1618, 2078, 2444, 2957, 3001 |
| TseFI | GTSAC | 3 cut(s) | 1230, 1468, 2031 |
| Tsp45I | GTSAC | 3 cut(s) | 1230, 1468, 2031 |
| TspGWI | ACGGA | 4 cut(s) | 1486, 1574, 3216, 3353 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2029 |
| Vha464I | CTTAAG | 1 cut(s) | 76 |
| VneI | GTGCAC | 3 cut(s) | 1718, 2213, 2517 |
| VpaK11BI | GGWCC | 1 cut(s) | 2756 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1146 |
| XapI | RAATTY | 9 cut(s) | 463, 490, 1641, 1915, 1945, 2277, 2301, 2400, 2945 |
| XbaI | TCTAGA | 1 cut(s) | 3247 |
| XceI | RCATGY | 3 cut(s) | 773, 1156, 2909 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1732 |
| XhoI | CTCGAG | 2 cut(s) | 42, 1247 |
| XmaJI | CCTAGG | 1 cut(s) | 2987 |
| XmiI | GTMKAC | 2 cut(s) | 413, 1383 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1704 |
| ZrmI | AGTACT | 3 cut(s) | 2312, 2494, 3057 |
| Zsp2I | ATGCAT | 1 cut(s) | 2907 |