Rh4DG150700

Mediator of RNA polymerase II transcription subunit 15a-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
30099155 .. 30108582
9428 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG150700.1

Sequence Viewer

Length: 3534 bp
ATGGAAACCAGTGACTGGAGAACTCAACTTTCCACAGATTTGCGAGGAAAAGTTGTGAGAAAGCTTATAGATATCCTAAGGAAGCGTACCCCACCTTCTGAAGATCCTTTATCCCAGCTGAAGAAGATACAGAGTGTTGCGGTGAAATTCGAGGAAAAGGTTTATATGGACTCCAGTGACCAGAAAGAATATATGAGGAAGGTAACAGTAAAGTTGATGGCAGCAGAGGGATCACATCCAAATGTCGTTCCTAAATCGTCACCAAACCCTCCCTGCATTGGTCTAAAACCCTCAAATCTAGTTGCTAATCAAGGCCAGTCAAATGCTGTTCAATCCACTGATCAGTCTCAAGAATGTGAAGTTCCTGAACAGCATTCATTGCCTGACGTACAAAATAATATTGCATGTGCTGGAGTTTCTGCTAACTTGGCACCTGCATGGACCACTGTCAGTGCTTCAGCTCAGGTTCTCCCGCCAAGTCAGAATCCGTATTCACTGAAGTCATTAGGAAGTTCATCAGGGAAAGGGATACCTTTTAATGAATCTGCCAATAATTTCAAGCAGGAGCAAGTGAAACAACATTCATCCCGCATTGACACTTATCCAAATCCACATCATTGTAGGCAGGTCAAGCAGGAATATATTGATCCTCAGCAGAACCATCAGCAACAAAATCCAAATCTTTATAAGCAGGTCAAGCAGGAACATGATGCCCCATCATGCATAACTCAGCAACAGAGAGTACATCAGCAGCAGCACCACCAGCAGAAACTCTTGAAACATACTCCTCAACAATCTGTCATCCAAGCTCCTCTTCTACAACATTCTGAGTTGCATGTTTCTCCACCCTCTGATCACCGGCAGGATCAGATATCTTCTTTTAAACAGACATCACAATCTGTGATTAAGAATCATCATCAGACAGCCTTTGGGCAAACTAATCCACAACCCACTCCTGATATTCATCAGAAAGTATCATCAACTCCAGAGCACGTATTAATGCAATCACAGAAGCAACCACATGTGATTAGGAGTATGTTGACTCCTAATAATCCACAACAGAATCAGTTAAGTGGGCAACCAAATGGTCTGCGTGACATGCAGCAGCAACATCATAGGTTGCCATTGCAGCACAATAATTTACTACAGGAGTTTAAGGGGCAAAGTATAATTCATTCAAGTGCAGACCATGAGGCCCAAAGAAAAAATATCTCTGTACGACATGGGAGCTTACAATTGCCTGAAGGTGGTAGCTCAGGCAAGCGTCAATGCGAGGTTAAAATGCAGGGGGAAACCAGACAGACTACTTCAGTTCTATTGCCAAAGCAAGTGCAAAAATCACAACCACAGAATCTTGAAAGGCAACTGAACTCTCAATCACAGCCAAAGATGCAAAATTTGCCATGTTCCGGGAGTATGCAAATAGCAGGACCAGCTTCCACATTTGGGCAAAGGATTTCAAACGTAGATAACTTGCAAGAGGAGCTCTATGAGAAGGTTGAAATTTTAAAAAGCAAATATTTAGCAGAACTGACACGGGTCGATCAAAAGATAGCATCTCATTTCCAGAAGCTCCATTCTATGCCTCAACAGCTAGAAAGACAGAATATCAAGAAACTTAAAGCAATAAAGCACATGCATTACACTGTCAAATTTTACATTATGAATCTAAATGTGCCCAAAAGCAAAATTACACCTGCTTGCAAGGAAAAGCTGGCGTTATTGGAGGAAAAAATTGTTTCTTTCCTTCAAATATTTGAGCAGCGAAAGCCTGCTACCTTGCTCCAGCATGGAGAACCTTCCAATGTGCACTCTATGCCTCAATCAGTGCAACTTCATTCTCAGGCTCCTCAAGGTCAAACATGCCAAGACGAAAAGAAGCTGCAATCGCAGTCGGTGAACATACAGTGTTTTGATACAAGTATGCAGCACAGCAATGTGACAAATGTGGTGAATGGTTCTGATTCTCTATCTGAGCCTCCAATCCTGCAACATGACACGGTGCATTTGCGATGGAATTTGACTGAGCAAGATTCAGAACAAGCAAATTCTTTGAAGTTAGAAAACCAGGTTCCCTCAGAGTCCTTTAAACTTCCTAAAAGCAGCCCCCAACTACCAAATGATATGCTGTTACGAAATCCTGCGCTTAGACTAGAGTCGCATGTGAATCCTCTTGAGTCAAGCTTCAGTACATATCAAGACATGCACCTGAAGTGGACTAATGAACAGCCAGATACTAAAACCCCAAAACAAGAACTTCAAAGGCAAAAGTCACAGCAGCAATTAGTACAACCAAAGCAGCAAATACTGCAGCAGCGTCACCGGTCACCAGAGTTGCAGTCTAGGGATTTAACTCCAAATTCTTTGCCCAAAAGTCTTAAACCTTCCTCTCAACAAGTTCCTCAACATTCTTCTGTGAGTGAAAAGAAGAATCTTCCAATGCCTCCTATGAAACCTAAATCTCCTGTCATTTCAAGAGGTTCACCCGAGGCGGGAATTTCTTTGGCTCCCTTTGCTTCAGCACATATACCAGGGGATTCTGAGAAACCTACGTCTGAAACTTCATTGGTTTCAAATGCAGTAAATATTGGAGGTCAACAAGCACAGAGTGCACCAGGAGCCATTCATTGTTCTTTTGATGGGTTGAATGCTGCTGAGCTGCCTGAGCAGCCTATTCAGAGATTGATTAAAATGGTTAACTCGGCGTCGTGTGAAGCACTAAGTTCTTTTGCTTCAGACATTGGTTCAGTAGTGTGTATGACTGATAGAATGTCTGGACCAGATAATGTTCAGAGATCTAGAGCTGCAATTGGTGATTTGGCAGACATGACCAATTTTCATTTGCAGGAGAGATACTTTGCCTGGCAGGAAACAACTGTTGGAACAAGGATAATGAAGCGGTACAGAAGTATGCCAATTAGCTATGAGGCTTCAGAAAATAGCAGTATAAATGATGGCTTGTCACAGCTAAGTGATATGGAAAATTTTGACTTGGACTCACCTGCAATATCTTATAGCAAACGGCGTAGGCTTGAGGTGAATCATCTCTTTGAAGAAATTACCGCTATCAACCAACAACTAATAGACACTGTTTTAGATATTAGAGATGGAGAGACTATTCCATCAGTAGCCTCAGCTCCAATTCTTGATGGTGAAGGAACCATTGTTTGGTGTTCCTTCATCGCTGTAGCTGTTGCTTCTAATCTGAAGTCTGAATGTGTTCCAGCTCCAATGCTTGCAATCCAGCCTCTGCGATTGCTTGTTCCTGCAAATTATCCTCTGTGCTCTCCTATATTTATGGACAAGTTGAAAGTGGAAGTCAGTGATGATCAAGATCTTTCAGCAAAGGTAAAGTCGAAGCTCAATTTCTCTCTCCGGAACCTGACGGAACCCTTGTCACTGGGGGAGATAGCAAGGACATGGGATGTATGTGCCCGTGCGGTGATCTCTGAATATGCAGAGCAGAATGGAGGAGGAAGCTTCAGTTCTAAGTATGGCACCTGGGAAGACTGCCTCAGTGCTGCAGCTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1177

Amino Acids

131.42

Weight (kDa)

8.34

Isoelectric Point (pI)

62.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIX_2 PF16987 4 - 78 7.9e-18 KIX domain
Med15_C PF21539 1080 - 1146 2.7e-06 ARC105/Med15 mediator subunit C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 687
AarI CACCTGC 3 cut(s) 442, 1705, 3010
Acc36I ACCTGC 5 cut(s) 442, 616, 682, 1705, 3010
AccB1I GGYRCC 2 cut(s) 430, 3497
AccB7I CCANNNNNTGG 2 cut(s) 15, 3168
AccIII TCCGGA 1 cut(s) 3375
AciI CCGC 7 cut(s) 140, 473, 589, 2492, 2899, 3063, 3440
AclWI GGATC 4 cut(s) 98, 238, 641, 873
AcsI RAATTY 9 cut(s) 146, 1396, 1503, 1652, 2017, 2047, 2359, 2496, 2983
AcyI GRCGYC 1 cut(s) 2705
AdeI CACNNNGTG 1 cut(s) 2609
AfaI GTAC 7 cut(s) 88, 390, 744, 1218, 2191, 2289, 2903
AfiI CCNNNNNNNGG 7 cut(s) 15, 278, 1247, 1409, 1446, 2492, 3168
AflIII ACRYGT 1 cut(s) 1021
AgeI ACCGGT 1 cut(s) 2322
AjnI CCWGG 5 cut(s) 2067, 2530, 2614, 2861, 3500
AjuI GAANNNNNNNTTGG 6 cut(s) 798, 830, 2862, 2894, 3151, 3183
Alw21I GWGCWC 5 cut(s) 993, 1488, 1812, 2614, 3287
Alw26I GTCTC 2 cut(s) 351, 3107
Alw44I GTGCAC 2 cut(s) 1808, 2610
AlwI GGATC 4 cut(s) 98, 238, 641, 873
AlwNI CAGNNNCTG 2 cut(s) 15, 3250
Ama87I CYCGRG 1 cut(s) 2486
Aor13HI TCCGGA 1 cut(s) 3375
AoxI GGCC 2 cut(s) 313, 1194
ApaLI GTGCAC 2 cut(s) 1808, 2610
ApoI RAATTY 9 cut(s) 146, 1396, 1503, 1652, 2017, 2047, 2359, 2496, 2983
ArsI GACNNNNNNTTYG 2 cut(s) 3338, 3370
AseI ATTAAT 1 cut(s) 998
AsiGI ACCGGT 1 cut(s) 2322
Asp700I GAANNNNTTC 1 cut(s) 3219
AspLEI GCGC 1 cut(s) 2146
AspS9I GGNCC 4 cut(s) 441, 1195, 1430, 2777
AsuC2I CCSGG 1 cut(s) 1411
AvaI CYCGRG 1 cut(s) 2486
AvaII GGWCC 3 cut(s) 441, 1430, 2777
AxyI CCTNAGG 1 cut(s) 77
BaeGI GKGCMC 4 cut(s) 1680, 1812, 2614, 3436
BaeI ACNNNNGTAYC 2 cut(s) 2893, 2926
BanI GGYRCC 2 cut(s) 430, 3497
BanII GRGCYC 1 cut(s) 1488
BarI GAAGNNNNNNTAC 2 cut(s) 79, 111
BbsI GAAGAC 1 cut(s) 3513
Bbv12I GWGCWC 5 cut(s) 993, 1488, 1812, 2614, 3287
BbvCI CCTCAGC 2 cut(s) 651, 3133
BccI CCATC 9 cut(s) 211, 669, 724, 2007, 2633, 2948, 3101, 3130, 3143
BceAI ACGGC 1 cut(s) 3038
BciT130I CCWGG 5 cut(s) 2069, 2532, 2616, 2863, 3502
BciVI GTATCC 1 cut(s) 522
BclI TGATCA 3 cut(s) 340, 853, 3328
BcnI CCSGG 1 cut(s) 1411
BcoDI GTCTC 2 cut(s) 351, 3107
BfaI CTAG 5 cut(s) 299, 1595, 2153, 2343, 2799
BfmI CTRYAG 4 cut(s) 1145, 2309, 3186, 3522
BfuAI ACCTGC 5 cut(s) 442, 616, 682, 1705, 3010
BfuI GTATCC 1 cut(s) 522
BglII AGATCT 2 cut(s) 2795, 3334
BlpI GCTNAGC 1 cut(s) 2655
Bme1390I CCNGG 6 cut(s) 1411, 2069, 2532, 2616, 2863, 3502
Bme18I GGWCC 3 cut(s) 441, 1430, 2777
BmeT110I CYCGRG 1 cut(s) 2486
BmgT120I GGNCC 4 cut(s) 441, 1195, 1430, 2777
BmiI GGNNCC 9 cut(s) 432, 1848, 2073, 2508, 2620, 3160, 3380, 3390, 3499
BmrFI CCNGG 6 cut(s) 1411, 2069, 2532, 2616, 2863, 3502
BmrI ACTGGG 1 cut(s) 3410
BmsI GCATC 3 cut(s) 700, 1380, 1565
BmuI ACTGGG 1 cut(s) 3410
BoxI GACNNNNGTC 3 cut(s) 446, 1538, 2155
BpiI GAAGAC 1 cut(s) 3513
BpmI CTGGAG 5 cut(s) 37, 157, 432, 969, 1769
Bpu10I CCTNAGC 5 cut(s) 462, 651, 1255, 2664, 3133
Bpu1102I GCTNAGC 1 cut(s) 2655
BpuEI CTTGAG 4 cut(s) 333, 1836, 2195, 3053
BpuMI CCSGG 1 cut(s) 1411
BsaAI YACGTR 1 cut(s) 994
BsaBI GATNNNNATC 2 cut(s) 963, 3333
BsaHI GRCGYC 1 cut(s) 2705
BsaJI CCNNGG 3 cut(s) 2487, 2531, 3501
BsaWI WCCGGW 2 cut(s) 2322, 3375
Bsc4I CCNNNNNNNGG 7 cut(s) 15, 278, 1247, 1409, 1446, 2492, 3168
Bse118I RCCGGY 2 cut(s) 858, 2322
Bse1I ACTGG 5 cut(s) 9, 20, 174, 316, 3405
Bse21I CCTNAGG 1 cut(s) 77
Bse3DI GCAATG 3 cut(s) 377, 1124, 1942
Bse8I GATNNNNATC 2 cut(s) 963, 3333
BseAI TCCGGA 1 cut(s) 3375
BseBI CCWGG 5 cut(s) 2069, 2532, 2616, 2863, 3502
BseDI CCNNGG 3 cut(s) 2487, 2531, 3501
BseGI GGATG 4 cut(s) 235, 584, 801, 3430
BseJI GATNNNNATC 2 cut(s) 963, 3333
BseLI CCNNNNNNNGG 7 cut(s) 15, 278, 1247, 1409, 1446, 2492, 3168
BseMI GCAATG 3 cut(s) 377, 1124, 1942
BseNI ACTGG 5 cut(s) 9, 20, 174, 316, 3405
BseRI GAGGAG 5 cut(s) 777, 801, 1496, 1839, 3486
BseSI GKGCMC 4 cut(s) 1680, 1812, 2614, 3436
BseYI CCCAGC 1 cut(s) 114
BsgI GTGCAG 1 cut(s) 1203
BshFI GGCC 2 cut(s) 315, 1196
BshNI GGYRCC 2 cut(s) 430, 3497
BshTI ACCGGT 1 cut(s) 2322
BsiHKAI GWGCWC 5 cut(s) 993, 1488, 1812, 2614, 3287
BsiHKCI CYCGRG 1 cut(s) 2486
BsiSI CCGG 4 cut(s) 859, 1410, 2323, 3376
BslI CCNNNNNNNGG 7 cut(s) 15, 278, 1247, 1409, 1446, 2492, 3168
BsmAI GTCTC 2 cut(s) 351, 3107
BsmI GAATGC 2 cut(s) 373, 2653
BsnI GGCC 2 cut(s) 315, 1196
BsoBI CYCGRG 1 cut(s) 2486
Bsp1286I GDGCHC 7 cut(s) 993, 1488, 1680, 1812, 2614, 3287, 3436
Bsp13I TCCGGA 1 cut(s) 3375
Bsp1720I GCTNAGC 1 cut(s) 2655
BspACI CCGC 7 cut(s) 140, 473, 589, 2492, 2899, 3063, 3440
BspANI GGCC 2 cut(s) 315, 1196
BspEI TCCGGA 1 cut(s) 3375
BspLI GGNNCC 9 cut(s) 432, 1848, 2073, 2508, 2620, 3160, 3380, 3390, 3499
BspMAI CTGCAG 2 cut(s) 2313, 3526
BspMI ACCTGC 5 cut(s) 442, 616, 682, 1705, 3010
BspPI GGATC 4 cut(s) 98, 238, 641, 873
BspT107I GGYRCC 2 cut(s) 430, 3497
BsrDI GCAATG 3 cut(s) 377, 1124, 1942
BsrFI RCCGGY 2 cut(s) 858, 2322
BsrI ACTGG 5 cut(s) 9, 20, 174, 316, 3405
BssAI RCCGGY 2 cut(s) 858, 2322
BssECI CCNNGG 3 cut(s) 2487, 2531, 3501
BssNI GRCGYC 1 cut(s) 2705
Bst2UI CCWGG 5 cut(s) 2069, 2532, 2616, 2863, 3502
Bst4CI ACNGT 7 cut(s) 208, 448, 1648, 1908, 2002, 2878, 3091
Bst6I CTCTTC 1 cut(s) 819
BstACI GRCGYC 1 cut(s) 2705
BstAPI GCANNNNNTGC 5 cut(s) 379, 1399, 1816, 2308, 2609
BstBAI YACGTR 1 cut(s) 994
BstC8I GCNNGC 5 cut(s) 1262, 1702, 1716, 1773, 3237
BstEII GGTNACC 1 cut(s) 2325
BstF5I GGATG 4 cut(s) 235, 584, 801, 3430
BstHHI GCGC 1 cut(s) 2146
BstMAI GTCTC 2 cut(s) 351, 3107
BstNI CCWGG 5 cut(s) 2069, 2532, 2616, 2863, 3502
BstNSI RCATGY 8 cut(s) 408, 839, 1025, 1102, 1639, 1866, 2165, 2206
BstPAI GACNNNNGTC 3 cut(s) 446, 1538, 2155
BstPI GGTNACC 1 cut(s) 2325
BstSCI CCNGG 6 cut(s) 1409, 2067, 2530, 2614, 2861, 3500
BstSFI CTRYAG 4 cut(s) 1145, 2309, 3186, 3522
BstSLI GKGCMC 4 cut(s) 1680, 1812, 2614, 3436
BstV2I GAAGAC 1 cut(s) 3513
BstX2I RGATCY 3 cut(s) 103, 2795, 3334
BstYI RGATCY 3 cut(s) 103, 2795, 3334
Bsu36I CCTNAGG 1 cut(s) 77
BsuI GTATCC 1 cut(s) 522
BsuRI GGCC 2 cut(s) 315, 1196
BtgZI GCGATG 2 cut(s) 2026, 3166
BtsCI GGATG 4 cut(s) 235, 584, 801, 3430
BveI ACCTGC 5 cut(s) 442, 616, 682, 1705, 3010
Cac8I GCNNGC 5 cut(s) 1262, 1702, 1716, 1773, 3237
CaiI CAGNNNCTG 2 cut(s) 15, 3250
CfoI GCGC 1 cut(s) 2146
Cfr10I RCCGGY 2 cut(s) 858, 2322
Cfr13I GGNCC 4 cut(s) 441, 1195, 1430, 2777
CseI GACGC 3 cut(s) 1253, 2306, 2694
CsiI ACCWGGT 1 cut(s) 2067
Csp6I GTAC 7 cut(s) 87, 389, 743, 1217, 2190, 2288, 2902
CspAI ACCGGT 1 cut(s) 2322
CviQI GTAC 7 cut(s) 87, 389, 743, 1217, 2190, 2288, 2902
DraI TTTAAA 3 cut(s) 883, 1509, 2089
DraIII CACNNNGTG 1 cut(s) 2609
Eam1104I CTCTTC 1 cut(s) 819
EarI CTCTTC 1 cut(s) 819
Ecl136II GAGCTC 1 cut(s) 1486
Eco24I GRGCYC 1 cut(s) 1488
Eco32I GATATC 2 cut(s) 73, 873
Eco47I GGWCC 3 cut(s) 441, 1430, 2777
Eco53kI GAGCTC 1 cut(s) 1486
Eco81I CCTNAGG 1 cut(s) 77
Eco88I CYCGRG 1 cut(s) 2486
Eco91I GGTNACC 1 cut(s) 2325
EcoICRI GAGCTC 1 cut(s) 1486
EcoO65I GGTNACC 1 cut(s) 2325
EcoRII CCWGG 5 cut(s) 2067, 2530, 2614, 2861, 3500
EcoRV GATATC 2 cut(s) 73, 873
EcoT22I ATGCAT 2 cut(s) 725, 1641
EcoT38I GRGCYC 1 cut(s) 1488
FalI AAGNNNNNCTT 2 cut(s) 798, 830
FauI CCCGC 3 cut(s) 480, 596, 2485
FbaI TGATCA 3 cut(s) 340, 853, 3328
FokI GGATG 4 cut(s) 222, 571, 788, 3437
FriOI GRGCYC 1 cut(s) 1488
FspBI CTAG 5 cut(s) 299, 1595, 2153, 2343, 2799
GlaI GCGC 1 cut(s) 2145
GsaI CCCAGC 1 cut(s) 118
GsuI CTGGAG 5 cut(s) 37, 157, 432, 969, 1769
HaeIII GGCC 2 cut(s) 315, 1196
HapII CCGG 4 cut(s) 859, 1410, 2323, 3376
HgaI GACGC 3 cut(s) 1253, 2306, 2694
HhaI GCGC 1 cut(s) 2146
Hin1I GRCGYC 1 cut(s) 2705
Hin6I GCGC 1 cut(s) 2144
HinP1I GCGC 1 cut(s) 2144
HincII GTYRAC 3 cut(s) 1041, 2597, 2698
HindII GTYRAC 3 cut(s) 1041, 2597, 2698
HindIII AAGCTT 3 cut(s) 62, 2182, 3478
HpaI GTTAAC 1 cut(s) 2698
HpaII CCGG 4 cut(s) 859, 1410, 2323, 3376
Hpy166II GTNNAC 8 cut(s) 1041, 1810, 1900, 2217, 2483, 2597, 2612, 2698
Hpy8I GTNNAC 8 cut(s) 1041, 1810, 1900, 2217, 2483, 2597, 2612, 2698
Hpy99I CGWCG 1 cut(s) 2710
HpyAV CCTTC 9 cut(s) 105, 193, 1238, 1489, 1757, 1809, 2394, 3149, 3187
HpyCH4III ACNGT 7 cut(s) 208, 448, 1648, 1908, 2002, 2878, 3091
HpyCH4IV ACGT 4 cut(s) 387, 993, 1464, 2552
HpySE526I ACGT 4 cut(s) 387, 993, 1464, 2552
Hsp92I GRCGYC 1 cut(s) 2705
HspAI GCGC 1 cut(s) 2144
Kpn2I TCCGGA 1 cut(s) 3375
Ksp22I TGATCA 3 cut(s) 340, 853, 3328
KspAI GTTAAC 1 cut(s) 2698
LweI GCATC 3 cut(s) 700, 1380, 1565
MabI ACCWGGT 1 cut(s) 2067
MaeI CTAG 5 cut(s) 299, 1595, 2153, 2343, 2799
MaeII ACGT 4 cut(s) 387, 993, 1464, 2552
MfeI CAATTG 2 cut(s) 1235, 2808
MflI RGATCY 3 cut(s) 103, 2795, 3334
MhlI GDGCHC 7 cut(s) 993, 1488, 1680, 1812, 2614, 3287, 3436
MlyI GAGTC 6 cut(s) 164, 1036, 2090, 2165, 2186, 2990
MmeI TCCRAC 1 cut(s) 2860
Mph1103I ATGCAT 2 cut(s) 725, 1641
MroI TCCGGA 1 cut(s) 3375
MroXI GAANNNNTTC 1 cut(s) 3219
MslI CAYNNNNRTG 4 cut(s) 240, 436, 1179, 1935
MspA1I CMGCKG 2 cut(s) 118, 3527
MspI CCGG 4 cut(s) 859, 1410, 2323, 3376
MspR9I CCNGG 6 cut(s) 1411, 2069, 2532, 2616, 2863, 3502
MunI CAATTG 2 cut(s) 1235, 2808
Mva1269I GAATGC 2 cut(s) 373, 2653
MvaI CCWGG 5 cut(s) 2069, 2532, 2616, 2863, 3502
NciI CCSGG 1 cut(s) 1411
NlaIV GGNNCC 9 cut(s) 432, 1848, 2073, 2508, 2620, 3160, 3380, 3390, 3499
NmeAIII GCCGAG 1 cut(s) 2681
NsiI ATGCAT 2 cut(s) 725, 1641
NspI RCATGY 8 cut(s) 408, 839, 1025, 1102, 1639, 1866, 2165, 2206
PaqCI CACCTGC 3 cut(s) 442, 1705, 3010
PciI ACATGT 1 cut(s) 1021
PctI GAATGC 2 cut(s) 373, 2653
PdmI GAANNNNTTC 1 cut(s) 3219
PflMI CCANNNNNTGG 2 cut(s) 15, 3168
PfoI TCCNGGA 1 cut(s) 1409
PinAI ACCGGT 1 cut(s) 2322
PleI GAGTC 6 cut(s) 164, 1036, 2089, 2164, 2185, 2990
PpsI GAGTC 6 cut(s) 164, 1036, 2089, 2164, 2185, 2990
Ppu21I YACGTR 1 cut(s) 994
PscI ACATGT 1 cut(s) 1021
PshAI GACNNNNGTC 3 cut(s) 446, 1538, 2155
PshBI ATTAAT 1 cut(s) 998
PsiI TTATAA 1 cut(s) 687
Psp124BI GAGCTC 1 cut(s) 1488
Psp6I CCWGG 5 cut(s) 2067, 2530, 2614, 2861, 3500
PspEI GGTNACC 1 cut(s) 2325
PspFI CCCAGC 1 cut(s) 114
PspGI CCWGG 5 cut(s) 2067, 2530, 2614, 2861, 3500
PspN4I GGNNCC 9 cut(s) 432, 1848, 2073, 2508, 2620, 3160, 3380, 3390, 3499
PspPI GGNCC 4 cut(s) 441, 1195, 1430, 2777
PstI CTGCAG 2 cut(s) 2313, 3526
PstNI CAGNNNCTG 2 cut(s) 15, 3250
PsuI RGATCY 3 cut(s) 103, 2795, 3334
PvuII CAGCTG 2 cut(s) 118, 3527
RsaI GTAC 7 cut(s) 88, 390, 744, 1218, 2191, 2289, 2903
RsaNI GTAC 7 cut(s) 87, 389, 743, 1217, 2190, 2288, 2902
RseI CAYNNNNRTG 4 cut(s) 240, 436, 1179, 1935
SacI GAGCTC 1 cut(s) 1488
Sau96I GGNCC 4 cut(s) 441, 1195, 1430, 2777
SchI GAGTC 6 cut(s) 164, 1036, 2090, 2165, 2186, 2990
ScrFI CCNGG 6 cut(s) 1411, 2069, 2532, 2616, 2863, 3502
SduI GDGCHC 7 cut(s) 993, 1488, 1680, 1812, 2614, 3287, 3436
SexAI ACCWGGT 1 cut(s) 2067
SfaNI GCATC 3 cut(s) 700, 1380, 1565
SfcI CTRYAG 4 cut(s) 1145, 2309, 3186, 3522
SinI GGWCC 3 cut(s) 441, 1430, 2777
SmiMI CAYNNNNRTG 4 cut(s) 240, 436, 1179, 1935
SmlI CTYRAG 4 cut(s) 348, 1851, 2174, 3032
SmoI CTYRAG 4 cut(s) 348, 1851, 2174, 3032
SsiI CCGC 7 cut(s) 140, 473, 589, 2492, 2899, 3063, 3440
SspI AATATT 4 cut(s) 400, 1520, 1755, 2587
SspMI CTAG 5 cut(s) 299, 1595, 2153, 2343, 2799
SstI GAGCTC 1 cut(s) 1488
StyD4I CCNGG 6 cut(s) 1409, 2067, 2530, 2614, 2861, 3500
TaaI ACNGT 7 cut(s) 208, 448, 1648, 1908, 2002, 2878, 3091
TaiI ACGT 4 cut(s) 390, 996, 1467, 2555
TaqI TCGA 3 cut(s) 150, 1542, 3356
TatI WGTACW 3 cut(s) 742, 2189, 2287
TspGWI ACGGA 2 cut(s) 477, 3401
Van91I CCANNNNNTGG 2 cut(s) 15, 3168
VneI GTGCAC 2 cut(s) 1808, 2610
VpaK11BI GGWCC 3 cut(s) 441, 1430, 2777
VspI ATTAAT 1 cut(s) 998
XapI RAATTY 9 cut(s) 146, 1396, 1503, 1652, 2017, 2047, 2359, 2496, 2983
XbaI TCTAGA 1 cut(s) 2798
XceI RCATGY 8 cut(s) 408, 839, 1025, 1102, 1639, 1866, 2165, 2206
XmnI GAANNNNTTC 1 cut(s) 3219
XspI CTAG 5 cut(s) 299, 1595, 2153, 2343, 2799
Zsp2I ATGCAT 2 cut(s) 725, 1641
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.