Rw4G012950

Mediator of RNA polymerase II transcription subunit 15a-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Reverse (-)
30376946 .. 30420179
43234 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G012950.1

Sequence Viewer

Length: 3444 bp
ATGGAAACCAGTGACTGGAGAACTCAACTTTCCACAGATTTGCGAGGAAAAGTTGTGAGAAAGCTTATAGATATCCTAAGGAAGCGTACCCCACCTTCTGAAGATCCTTTATCCCAGCTGAAGAAGATACAGAGTGTTGCGGTGAAATTCGAGGAAAAGGTTTATATGGACTCCAGTGACCAGAAAGAATATATGAGGAAGGTAACAGTAAAGTTGATGGCAGCAGAGGGATCACATCCAAATGTCGTTCCTAAATCGTCACCAAACCCTCCCTGCATTGGTCTAAAACCCTCAAATCTAGTTGCTAATCAAGGCCAGTCAATTGCTGTTCAATCCACTGATCAGTCTCAAGAATGTGAAGTTCCTGAACAGCATTCATTGCCTGACGTACAAAATAATATTGCATGTGCTGGAGTTTCTGCTAACTTGGCACCTGCATGGACCACTGTCAGTGCTTCAGCTCAGGTTCTCCCGCCAAGTCAGAATCCGTATTCACTGAAGTCATTAGGAAGTTCATCAGGGAAAGGGATACCTTTTAATGAATCTGCCAATAATTTCAAGCAGGAGCAAGTGAAACAACATTCATCCCGCATTGACACTTATCCAAATCCACATCATTGTAGGCAGGTCAAGCAGGAATATATTGATCCTCAGCAGAACCATCAGCAACAAAATCCAAATCTTTATAAGCAGGTCAAGCAGGAACATGATGCCCCATCATGCATAACTCAGCAACAGAGAGTACATCAGCAGCAGCACCACCAGCAGAAACTCTTGAAACATACTCCTCAACAATCTGTCATCCAAGCTCCTCTTCTACAACATTCTGAGTTGCATGTTTCTCCACCCTCTGATCACCGGCAGGATCAGATATCTTCTTTTAAACAGACATCACAATCTGTGATTAAGAATCATCATCAGACAGCCTTTGGGCAAACTAATCCACAACCCACTCCTGATATTCATCAGAAAGTATCATCAACTCCAGAGCACGTATTAATGCAATCACAGAAGCAACCACATGTGATTAGGAGTATGTTGACTCCTAATAATCCACAACAGAATCAGTTAAGTGGGCAACCAAATGGTCTGCGTGACATGCAGCAGCAATATCATAGGTTGCCATTGCAGCACAATAATTTACTACAGGAGTTTAAGGGGCAAAGTATAATTCATTCAAGTGCAGACCATGAGGCCCAAAGAAAAAATATCTCTGTACGACATGGGAGCTCAGGCAAGCGTCAATGCGAGGTTAAAATGCAGGGGGAAACCAGACAGACTACTTCAGTTCTATTGCCAAAGCAAGTGCAAAAATCACAACCACAGAATCTTGAAAGGCAACTGAACTCTCAATCACAGCCAAAGATGCAAAATTTGCCATGTTCTGGGAGTATGCAAATAGCAGGACCAGCTTCCACATTTGGGCAAAGGATTTCAAACGTAGATAACTTGCAAGAGGAGCTCTATGAGAAGGTTGAAATTTTAAAAAGCAAATATTTAGCAGAACTGACACGGGTCGATCAAAAGATAGCATCTCATTTCCAGAAGCTCCATTCTATGCCTCAACAGCTAGAAAGACAGAATATCAAGAAACTTAAAGCAATAAAGCACATGCATTACACTGTCAAATTTTACATTATGAATCTAAATGTGCCCAAAAGCAAAATTACACCTGCTTGCAAGGAAAAGCTGGCGTTATTGGAGGAAAAAATTGTTTCTTTCCTTCAAATATTTGAGCAGCGAAAGCCTGCTACCTTGCTCCAGCATGGAGAACCTTCCAATGTGCACTCTATGCCTCAATCAGTGCAACTTCATTCTCAGGCTCCTCAAGGTCAAACATGCCAAGACGAAAAGAAGCTGCAATCGCAGTCGGTGAACATACAGTGTTTTGATACAAGTATGCAGCACAGCAATGTGACAAATGTGGTGAATGGTTCTGATTCTCTATCTGAGCCTCCAATCCTGCAACATGACACGGTGCATTTGCGATGGAATTTGACTGAGCAAGATTCAGAACAAGCAAATTCTTTGAAGTTAGAAAACCAGGTTCCCTCAGAGTCCTTTAAACTTCCTAAAAGCAGCCCCCAACTACCAAATGATATGCTGTTACGAAATCCTGCGCTTAGACTAGAGTCGCATGTGAATCCTCTTGAGTCAAGCTTCAGTACATATCAAGACATGCACCTGAAGTGGACTAATGAACAGCCAGATACTAAAACCCCAAAACAAGAACTTCAAAGGCAAAAGTCACAGCAGCAATTAGTACAACCAAAGCAGCAAATACTGCAGCAGCGTCACCGGTCACCAGAGTTGCAGTCTAGGGATTTAACTCCAAATTCTTTGCCCAAAAGTCTTAAACCTTCCTCTCAACAAGTTCCTCAACATTCTTCTGTGAGTGAAAAGAAGAATCTTCCAATGCCTCCTATGAAACCTAAATCTCCTGTCATTTCAAGAGGTTCACCCGAGGCGGGAATTTCTTTGGCTCCCTTTGCTTCAGCACATATACCAGGGGATTCTGAGAAACCTACGTCTGAAACTTCATTGGTTTCAAATGCAGTAAATATTGGAGGTCAACAAGCACAGAGTGCACCAGGAGCCATTCATTGTTCTTTTGATGGGTTGAATGCTGCTGAGCTGCCTGAGCAGCCTATTCAGAGATTGATTAAAATGGTTAACTCGGCGTCGTGTGAAGCACTAAGTTCTTTTGCTTCAGACATTGGTTCAGTAGTGTGTATGACTGATAGAATGTCTGGACCAGATAATGTTCAGAGATCTAGAGCTGCAATTGGTGATTTGGCAGACATGACCAATTTTCATTTGCAGGAGAGATACTTTGCCTGGCAGGAAACAACTGTTGGAACAAGGATAATGAAGCGGTACAGAAGTATGCCAATTAGCTATGAGGCTTCAGAAAATAGCAGTATAAATGATGGCTTGTCACAGCTAAGTGATATGGAAAATTTTGACTTGGACTCACCTGCAATATCTTATAGCAAACGGCGTAGGCTTGAGGTGAATCATCTCTTTGAAGAAATTACCGCTATCAACCAACAACTAATAGACACTGTTTTAGATATTAGAGATGGAGAGACTATTCCATCAGTAGCCTCAGCTCCAATTCTTGATGGTGAAGGAACCATTGTTAGGTGTTCCTTCATCGCTGTAGCTGTTGCTTCTAATCTGAAGTCTGAATGTGTTCCAGCTCCAATGGTATGTCTTATATATTATGATGATCAAGATCTTTCAGCAAAGGTAAAGTCGAAGCTCAATTTCACTTTCTGGAACCTGATGGAACCCTTGTTACTTGGGGAGATAGCAAAGACATGGGATGTATGTGCCCGAGTGGTGATCTTTGAATATGCAGAGCAGAATGGAGGAGGAAGCTTCAGTTCTAAGTATGACACCTGGGAAGACTGCGCCTTAGGGCTGCAGCTGCTTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1147

Amino Acids

128.64

Weight (kDa)

8.13

Isoelectric Point (pI)

62.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIX_2 PF16987 4 - 78 7.6e-18 KIX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 687
AarI CACCTGC 3 cut(s) 442, 1681, 2986
Acc36I ACCTGC 5 cut(s) 442, 616, 682, 1681, 2986
AccB1I GGYRCC 1 cut(s) 430
AccB7I CCANNNNNTGG 2 cut(s) 15, 1385
AciI CCGC 6 cut(s) 140, 473, 589, 2468, 2875, 3039
AclWI GGATC 4 cut(s) 98, 238, 641, 873
AcsI RAATTY 9 cut(s) 146, 1372, 1479, 1628, 1993, 2023, 2335, 2472, 2959
AcyI GRCGYC 1 cut(s) 2681
AdeI CACNNNGTG 1 cut(s) 2585
AfaI GTAC 7 cut(s) 88, 390, 744, 1218, 2167, 2265, 2879
AfiI CCNNNNNNNGG 6 cut(s) 15, 278, 1385, 1422, 2468, 3144
AflIII ACRYGT 1 cut(s) 1021
AgeI ACCGGT 1 cut(s) 2298
AjnI CCWGG 5 cut(s) 2043, 2506, 2590, 2837, 3404
AjuI GAANNNNNNNTTGG 4 cut(s) 798, 830, 2838, 2870
Alw21I GWGCWC 5 cut(s) 993, 1232, 1464, 1788, 2590
Alw26I GTCTC 2 cut(s) 351, 3083
Alw44I GTGCAC 2 cut(s) 1784, 2586
AlwI GGATC 4 cut(s) 98, 238, 641, 873
AlwNI CAGNNNCTG 1 cut(s) 15
Ama87I CYCGRG 2 cut(s) 2462, 3339
AoxI GGCC 2 cut(s) 313, 1194
ApaLI GTGCAC 2 cut(s) 1784, 2586
ApoI RAATTY 9 cut(s) 146, 1372, 1479, 1628, 1993, 2023, 2335, 2472, 2959
ArsI GACNNNNNNTTYG 2 cut(s) 3242, 3274
AseI ATTAAT 1 cut(s) 998
AsiGI ACCGGT 1 cut(s) 2298
Asp700I GAANNNNTTC 1 cut(s) 3195
AspLEI GCGC 2 cut(s) 2122, 3419
AspS9I GGNCC 4 cut(s) 441, 1195, 1406, 2753
AvaI CYCGRG 2 cut(s) 2462, 3339
AvaII GGWCC 3 cut(s) 441, 1406, 2753
AxyI CCTNAGG 2 cut(s) 77, 3421
BaeGI GKGCMC 4 cut(s) 1656, 1788, 2590, 3340
BaeI ACNNNNGTAYC 2 cut(s) 2869, 2902
BanI GGYRCC 1 cut(s) 430
BanII GRGCYC 2 cut(s) 1232, 1464
BarI GAAGNNNNNNTAC 2 cut(s) 79, 111
BbsI GAAGAC 1 cut(s) 3417
Bbv12I GWGCWC 5 cut(s) 993, 1232, 1464, 1788, 2590
BbvCI CCTCAGC 2 cut(s) 651, 3109
BceAI ACGGC 1 cut(s) 3014
BciT130I CCWGG 5 cut(s) 2045, 2508, 2592, 2839, 3406
BciVI GTATCC 1 cut(s) 522
BclI TGATCA 3 cut(s) 340, 853, 3232
BcoDI GTCTC 2 cut(s) 351, 3083
BfaI CTAG 5 cut(s) 299, 1571, 2129, 2319, 2775
BfmI CTRYAG 4 cut(s) 1145, 2285, 3162, 3428
BfuAI ACCTGC 5 cut(s) 442, 616, 682, 1681, 2986
BfuI GTATCC 1 cut(s) 522
BglII AGATCT 2 cut(s) 2771, 3238
BlpI GCTNAGC 1 cut(s) 2631
Bme1390I CCNGG 5 cut(s) 2045, 2508, 2592, 2839, 3406
Bme18I GGWCC 3 cut(s) 441, 1406, 2753
BmeT110I CYCGRG 2 cut(s) 2462, 3339
BmgT120I GGNCC 4 cut(s) 441, 1195, 1406, 2753
BmiI GGNNCC 8 cut(s) 432, 1824, 2049, 2484, 2596, 3136, 3284, 3294
BmrFI CCNGG 5 cut(s) 2045, 2508, 2592, 2839, 3406
BmsI GCATC 3 cut(s) 700, 1356, 1541
BoxI GACNNNNGTC 3 cut(s) 446, 1514, 2131
BpiI GAAGAC 1 cut(s) 3417
BpmI CTGGAG 5 cut(s) 37, 157, 432, 969, 1745
Bpu10I CCTNAGC 5 cut(s) 462, 651, 1231, 2640, 3109
Bpu1102I GCTNAGC 1 cut(s) 2631
BpuEI CTTGAG 4 cut(s) 333, 1812, 2171, 3029
BsaAI YACGTR 1 cut(s) 994
BsaBI GATNNNNATC 2 cut(s) 963, 3237
BsaHI GRCGYC 1 cut(s) 2681
BsaJI CCNNGG 3 cut(s) 2463, 2507, 3405
BsaWI WCCGGW 1 cut(s) 2298
Bsc4I CCNNNNNNNGG 6 cut(s) 15, 278, 1385, 1422, 2468, 3144
Bse118I RCCGGY 2 cut(s) 858, 2298
Bse1I ACTGG 4 cut(s) 9, 20, 174, 316
Bse21I CCTNAGG 2 cut(s) 77, 3421
Bse3DI GCAATG 3 cut(s) 377, 1124, 1918
Bse8I GATNNNNATC 2 cut(s) 963, 3237
BseBI CCWGG 5 cut(s) 2045, 2508, 2592, 2839, 3406
BseDI CCNNGG 3 cut(s) 2463, 2507, 3405
BseGI GGATG 4 cut(s) 235, 584, 801, 3334
BseJI GATNNNNATC 2 cut(s) 963, 3237
BseLI CCNNNNNNNGG 6 cut(s) 15, 278, 1385, 1422, 2468, 3144
BseMI GCAATG 3 cut(s) 377, 1124, 1918
BseNI ACTGG 4 cut(s) 9, 20, 174, 316
BseRI GAGGAG 5 cut(s) 777, 801, 1472, 1815, 3390
BseSI GKGCMC 4 cut(s) 1656, 1788, 2590, 3340
BseYI CCCAGC 1 cut(s) 114
BsgI GTGCAG 1 cut(s) 1203
BshFI GGCC 2 cut(s) 315, 1196
BshNI GGYRCC 1 cut(s) 430
BshTI ACCGGT 1 cut(s) 2298
BsiHKAI GWGCWC 5 cut(s) 993, 1232, 1464, 1788, 2590
BsiHKCI CYCGRG 2 cut(s) 2462, 3339
BsiSI CCGG 2 cut(s) 859, 2299
BslI CCNNNNNNNGG 6 cut(s) 15, 278, 1385, 1422, 2468, 3144
BsmAI GTCTC 2 cut(s) 351, 3083
BsmI GAATGC 2 cut(s) 373, 2629
BsnI GGCC 2 cut(s) 315, 1196
BsoBI CYCGRG 2 cut(s) 2462, 3339
Bsp1286I GDGCHC 7 cut(s) 993, 1232, 1464, 1656, 1788, 2590, 3340
Bsp1720I GCTNAGC 1 cut(s) 2631
BspACI CCGC 6 cut(s) 140, 473, 589, 2468, 2875, 3039
BspANI GGCC 2 cut(s) 315, 1196
BspLI GGNNCC 8 cut(s) 432, 1824, 2049, 2484, 2596, 3136, 3284, 3294
BspMAI CTGCAG 2 cut(s) 2289, 3432
BspMI ACCTGC 5 cut(s) 442, 616, 682, 1681, 2986
BspPI GGATC 4 cut(s) 98, 238, 641, 873
BspT107I GGYRCC 1 cut(s) 430
BsrDI GCAATG 3 cut(s) 377, 1124, 1918
BsrFI RCCGGY 2 cut(s) 858, 2298
BsrI ACTGG 4 cut(s) 9, 20, 174, 316
BssAI RCCGGY 2 cut(s) 858, 2298
BssECI CCNNGG 3 cut(s) 2463, 2507, 3405
BssNI GRCGYC 1 cut(s) 2681
Bst2UI CCWGG 5 cut(s) 2045, 2508, 2592, 2839, 3406
Bst4CI ACNGT 7 cut(s) 208, 448, 1624, 1884, 1978, 2854, 3067
Bst6I CTCTTC 1 cut(s) 819
BstACI GRCGYC 1 cut(s) 2681
BstAPI GCANNNNNTGC 5 cut(s) 379, 1375, 1792, 2284, 2585
BstBAI YACGTR 1 cut(s) 994
BstC8I GCNNGC 4 cut(s) 1238, 1678, 1692, 1749
BstEII GGTNACC 1 cut(s) 2301
BstF5I GGATG 4 cut(s) 235, 584, 801, 3334
BstHHI GCGC 2 cut(s) 2122, 3419
BstMAI GTCTC 2 cut(s) 351, 3083
BstNI CCWGG 5 cut(s) 2045, 2508, 2592, 2839, 3406
BstNSI RCATGY 8 cut(s) 408, 839, 1025, 1102, 1615, 1842, 2141, 2182
BstPAI GACNNNNGTC 3 cut(s) 446, 1514, 2131
BstPI GGTNACC 1 cut(s) 2301
BstSCI CCNGG 5 cut(s) 2043, 2506, 2590, 2837, 3404
BstSFI CTRYAG 4 cut(s) 1145, 2285, 3162, 3428
BstSLI GKGCMC 4 cut(s) 1656, 1788, 2590, 3340
BstV2I GAAGAC 1 cut(s) 3417
BstX2I RGATCY 3 cut(s) 103, 2771, 3238
BstYI RGATCY 3 cut(s) 103, 2771, 3238
Bsu36I CCTNAGG 2 cut(s) 77, 3421
BsuI GTATCC 1 cut(s) 522
BsuRI GGCC 2 cut(s) 315, 1196
BtgZI GCGATG 2 cut(s) 2002, 3142
BtsCI GGATG 4 cut(s) 235, 584, 801, 3334
BveI ACCTGC 5 cut(s) 442, 616, 682, 1681, 2986
Cac8I GCNNGC 4 cut(s) 1238, 1678, 1692, 1749
CaiI CAGNNNCTG 1 cut(s) 15
CfoI GCGC 2 cut(s) 2122, 3419
Cfr10I RCCGGY 2 cut(s) 858, 2298
Cfr13I GGNCC 4 cut(s) 441, 1195, 1406, 2753
CseI GACGC 3 cut(s) 1229, 2282, 2670
CsiI ACCWGGT 1 cut(s) 2043
Csp6I GTAC 7 cut(s) 87, 389, 743, 1217, 2166, 2264, 2878
CspAI ACCGGT 1 cut(s) 2298
CviQI GTAC 7 cut(s) 87, 389, 743, 1217, 2166, 2264, 2878
DraI TTTAAA 3 cut(s) 883, 1485, 2065
DraIII CACNNNGTG 1 cut(s) 2585
Eam1104I CTCTTC 1 cut(s) 819
EarI CTCTTC 1 cut(s) 819
Ecl136II GAGCTC 2 cut(s) 1230, 1462
Eco24I GRGCYC 2 cut(s) 1232, 1464
Eco32I GATATC 2 cut(s) 73, 873
Eco47I GGWCC 3 cut(s) 441, 1406, 2753
Eco53kI GAGCTC 2 cut(s) 1230, 1462
Eco81I CCTNAGG 2 cut(s) 77, 3421
Eco88I CYCGRG 2 cut(s) 2462, 3339
Eco91I GGTNACC 1 cut(s) 2301
EcoICRI GAGCTC 2 cut(s) 1230, 1462
EcoO65I GGTNACC 1 cut(s) 2301
EcoRII CCWGG 5 cut(s) 2043, 2506, 2590, 2837, 3404
EcoRV GATATC 2 cut(s) 73, 873
EcoT22I ATGCAT 2 cut(s) 725, 1617
EcoT38I GRGCYC 2 cut(s) 1232, 1464
FalI AAGNNNNNCTT 2 cut(s) 798, 830
FauI CCCGC 3 cut(s) 480, 596, 2461
FbaI TGATCA 3 cut(s) 340, 853, 3232
FokI GGATG 4 cut(s) 222, 571, 788, 3341
FriOI GRGCYC 2 cut(s) 1232, 1464
FspBI CTAG 5 cut(s) 299, 1571, 2129, 2319, 2775
GlaI GCGC 2 cut(s) 2121, 3418
GsaI CCCAGC 1 cut(s) 118
GsuI CTGGAG 5 cut(s) 37, 157, 432, 969, 1745
HaeIII GGCC 2 cut(s) 315, 1196
HapII CCGG 2 cut(s) 859, 2299
HgaI GACGC 3 cut(s) 1229, 2282, 2670
HhaI GCGC 2 cut(s) 2122, 3419
Hin1I GRCGYC 1 cut(s) 2681
Hin6I GCGC 2 cut(s) 2120, 3417
HinP1I GCGC 2 cut(s) 2120, 3417
HincII GTYRAC 3 cut(s) 1041, 2573, 2674
HindII GTYRAC 3 cut(s) 1041, 2573, 2674
HindIII AAGCTT 3 cut(s) 62, 2158, 3382
HpaI GTTAAC 1 cut(s) 2674
HpaII CCGG 2 cut(s) 859, 2299
Hpy166II GTNNAC 8 cut(s) 1041, 1786, 1876, 2193, 2459, 2573, 2588, 2674
Hpy8I GTNNAC 8 cut(s) 1041, 1786, 1876, 2193, 2459, 2573, 2588, 2674
Hpy99I CGWCG 1 cut(s) 2686
HpyAV CCTTC 8 cut(s) 105, 193, 1465, 1733, 1785, 2370, 3125, 3163
HpyCH4III ACNGT 7 cut(s) 208, 448, 1624, 1884, 1978, 2854, 3067
HpyCH4IV ACGT 4 cut(s) 387, 993, 1440, 2528
HpySE526I ACGT 4 cut(s) 387, 993, 1440, 2528
Hsp92I GRCGYC 1 cut(s) 2681
HspAI GCGC 2 cut(s) 2120, 3417
Ksp22I TGATCA 3 cut(s) 340, 853, 3232
KspAI GTTAAC 1 cut(s) 2674
LweI GCATC 3 cut(s) 700, 1356, 1541
MabI ACCWGGT 1 cut(s) 2043
MaeI CTAG 5 cut(s) 299, 1571, 2129, 2319, 2775
MaeII ACGT 4 cut(s) 387, 993, 1440, 2528
MfeI CAATTG 2 cut(s) 321, 2784
MflI RGATCY 3 cut(s) 103, 2771, 3238
MhlI GDGCHC 7 cut(s) 993, 1232, 1464, 1656, 1788, 2590, 3340
MlyI GAGTC 6 cut(s) 164, 1036, 2066, 2141, 2162, 2966
MmeI TCCRAC 1 cut(s) 2836
Mph1103I ATGCAT 2 cut(s) 725, 1617
MroXI GAANNNNTTC 1 cut(s) 3195
MslI CAYNNNNRTG 4 cut(s) 240, 436, 1179, 1911
MspA1I CMGCKG 2 cut(s) 118, 3433
MspI CCGG 2 cut(s) 859, 2299
MspR9I CCNGG 5 cut(s) 2045, 2508, 2592, 2839, 3406
MunI CAATTG 2 cut(s) 321, 2784
Mva1269I GAATGC 2 cut(s) 373, 2629
MvaI CCWGG 5 cut(s) 2045, 2508, 2592, 2839, 3406
NlaIV GGNNCC 8 cut(s) 432, 1824, 2049, 2484, 2596, 3136, 3284, 3294
NmeAIII GCCGAG 1 cut(s) 2657
NmuCI GTSAC 9 cut(s) 11, 176, 258, 1094, 1915, 2247, 2294, 2301, 2937
NsiI ATGCAT 2 cut(s) 725, 1617
NspI RCATGY 8 cut(s) 408, 839, 1025, 1102, 1615, 1842, 2141, 2182
PaqCI CACCTGC 3 cut(s) 442, 1681, 2986
PciI ACATGT 1 cut(s) 1021
PctI GAATGC 2 cut(s) 373, 2629
PdmI GAANNNNTTC 1 cut(s) 3195
PflMI CCANNNNNTGG 2 cut(s) 15, 1385
PinAI ACCGGT 1 cut(s) 2298
PleI GAGTC 6 cut(s) 164, 1036, 2065, 2140, 2161, 2966
PpsI GAGTC 6 cut(s) 164, 1036, 2065, 2140, 2161, 2966
Ppu21I YACGTR 1 cut(s) 994
PscI ACATGT 1 cut(s) 1021
PshAI GACNNNNGTC 3 cut(s) 446, 1514, 2131
PshBI ATTAAT 1 cut(s) 998
PsiI TTATAA 1 cut(s) 687
Psp124BI GAGCTC 2 cut(s) 1232, 1464
Psp6I CCWGG 5 cut(s) 2043, 2506, 2590, 2837, 3404
PspEI GGTNACC 1 cut(s) 2301
PspFI CCCAGC 1 cut(s) 114
PspGI CCWGG 5 cut(s) 2043, 2506, 2590, 2837, 3404
PspN4I GGNNCC 8 cut(s) 432, 1824, 2049, 2484, 2596, 3136, 3284, 3294
PspPI GGNCC 4 cut(s) 441, 1195, 1406, 2753
PsrI GAACNNNNNNTAC 2 cut(s) 3285, 3317
PstI CTGCAG 2 cut(s) 2289, 3432
PstNI CAGNNNCTG 1 cut(s) 15
PsuI RGATCY 3 cut(s) 103, 2771, 3238
PvuII CAGCTG 2 cut(s) 118, 3433
RsaI GTAC 7 cut(s) 88, 390, 744, 1218, 2167, 2265, 2879
RsaNI GTAC 7 cut(s) 87, 389, 743, 1217, 2166, 2264, 2878
RseI CAYNNNNRTG 4 cut(s) 240, 436, 1179, 1911
SacI GAGCTC 2 cut(s) 1232, 1464
Sau96I GGNCC 4 cut(s) 441, 1195, 1406, 2753
SchI GAGTC 6 cut(s) 164, 1036, 2066, 2141, 2162, 2966
ScrFI CCNGG 5 cut(s) 2045, 2508, 2592, 2839, 3406
SduI GDGCHC 7 cut(s) 993, 1232, 1464, 1656, 1788, 2590, 3340
SexAI ACCWGGT 1 cut(s) 2043
SfaNI GCATC 3 cut(s) 700, 1356, 1541
SfcI CTRYAG 4 cut(s) 1145, 2285, 3162, 3428
SinI GGWCC 3 cut(s) 441, 1406, 2753
SmiMI CAYNNNNRTG 4 cut(s) 240, 436, 1179, 1911
SmlI CTYRAG 4 cut(s) 348, 1827, 2150, 3008
SmoI CTYRAG 4 cut(s) 348, 1827, 2150, 3008
SsiI CCGC 6 cut(s) 140, 473, 589, 2468, 2875, 3039
SspI AATATT 4 cut(s) 400, 1496, 1731, 2563
SspMI CTAG 5 cut(s) 299, 1571, 2129, 2319, 2775
SstI GAGCTC 2 cut(s) 1232, 1464
StyD4I CCNGG 5 cut(s) 2043, 2506, 2590, 2837, 3404
TaaI ACNGT 7 cut(s) 208, 448, 1624, 1884, 1978, 2854, 3067
TaiI ACGT 4 cut(s) 390, 996, 1443, 2531
TaqI TCGA 3 cut(s) 150, 1518, 3260
TatI WGTACW 3 cut(s) 742, 2165, 2263
TseFI GTSAC 9 cut(s) 11, 176, 258, 1094, 1915, 2247, 2294, 2301, 2937
Tsp45I GTSAC 9 cut(s) 11, 176, 258, 1094, 1915, 2247, 2294, 2301, 2937
TspGWI ACGGA 1 cut(s) 477
Van91I CCANNNNNTGG 2 cut(s) 15, 1385
VneI GTGCAC 2 cut(s) 1784, 2586
VpaK11BI GGWCC 3 cut(s) 441, 1406, 2753
VspI ATTAAT 1 cut(s) 998
XapI RAATTY 9 cut(s) 146, 1372, 1479, 1628, 1993, 2023, 2335, 2472, 2959
XbaI TCTAGA 1 cut(s) 2774
XceI RCATGY 8 cut(s) 408, 839, 1025, 1102, 1615, 1842, 2141, 2182
XmnI GAANNNNTTC 1 cut(s) 3195
XspI CTAG 5 cut(s) 299, 1571, 2129, 2319, 2775
Zsp2I ATGCAT 2 cut(s) 725, 1617
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.