Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001408

Physical Location & Seq

Genomic Coordinates Forward (+)

26725494 .. 26730491

Gene Structure 4998 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g24630.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2970 bp

ATGAGTGTGTTGATTTACAAGAAGTCTATTTCGATCAAGTATTCTGGTCCAAGCAATGGGAGAATGATTAATTTGATCAATGTGGACGTAGAAAGGATTGGAGATTTCTGTTGGTACATTCATGGAATTTGGTTGCTTCCTCTTCAAGTGGTTTTGGCCTTGGTTATTCTTTACAAAAATCTCGGTGCTGCCCCCTCTGCTGCTGCTCTCATTGCCACAGTTTTGGTCATGGTATGCAACACACCTCTGGCCAATATGCAAGAAAAGCTTCATTCCAAGATGATGGAAGCAAAGGATTCACGAATCAAAGTAACATCAGAGACTCTCAAAAGCATGCGAGTTTTAAAGCTGCATTCTTGGGAATCAACATTCTTGAAGAAGCTGCTTATGCTGAGGGAAACTGAGAGGAGTTGGCTGAAGAGATACCTCTATACATGCTCAGTAGTGGCTTTTCTCTTTTGGGCGTCACCTACTCTGGTTTCAGTTGCCACTTTTGGTGTATGCATTATACTCGATACACCATTGAACACAGGAACTGTTTTGTCTGCTTTAGCTACTTTTAGAATTCTTCAAGAGCCTATCTACAACCTCCCAGAGCTTATTTCCATGATTGCTCAAACAAAGGTATCAGTGGATCGTATTAAAGAATTCGTGAAAGAAGATCAATTGAAGCTAATTCCTGGTCATACTCCAAAACAATCCAATGTCATGATTGTAATTGAGACGGGAGAGTATGCATGGAAAACAAGTGATCAAAATTTAAAGAATCCTACGATCAAAATTGTGGAGAAGATAGAGATAATAAAAGGATACAAGGTCGCAATTTGTGGTTCTGTTGGTTCTGGCAAGTCAAGCCTGCTAAGTAGTATACTTGGTGAGATTCCCAAGATTTCTGGGGTAGGGGCAAAGGTCTATGGGACAAAAGCTTATGTTCCACAATGTTCTTGGATTCAATCTGGAACTGTAATTAAAGGTGGTCAGATTGCTCAGTCTGGAAAATATGAAGATTTGATTGCCGACCTCAATGGTGAACTTGTTAGACAAATGGCTGCACATAGGAAATCGTTAGACCAAGTTAATAGATGCCAAGTGGATGTTTCCTTAAAGTGTAGAGCTCATCAAGTTAATCTAATAGAGGTGGTAGAAGAGAAAGGGCCTTTCAACAATGGCAAGCTTCCAGAAAAGAGTCACGAAGAAGAAGCAGAAACTGGTCCAGTGAAGTTGAGTGTTTATTCCACCTTTGTAACTTCTGCTTATGGAGGTGCTCTTGTCCCAGTCATCCTTCTCTGTCAAGTCCTCTTCCAGGGGCTGCAAATGGGCAGCAACTACTGGATGGCTTGGGGAACAGAGAAGGAAGGTAAGATCAGTAGAGAGCGATTGATATGGGTGTTTATTATGCTGTCCGGTGGGAGTTCCATCTTCATATTGGGAAGGGCAGTTTTTCTGGCAACTATTGCTTTACAGACATCTCAGTGTCTCTTTCTTAGAATGATAACTTCAGTATTCCGAGCACCTATCTCATTTTTCGACATCACTCCTTCTAGCCGAATCCTGAATAGGTCTTCCACAGATCAAAGCACTGTAGACATGGACATTCCTTATAGATTAGCTGGATTAGCATTTGCACTTATCCAACTAATAAGCATCATAGTTCTTATGTCCCAAGTGGCCTGGCAAGTTTTCCTTCTTTTCCTTGGGGTTCTTGGACTCTCCATATGGTATCAAGCCTATTACATTACCACAGCTAGAGAACTTGCGAGGATGGTTGGAATTCGTAAGGCTCCAATCCTCCATCACTTCTCAGAATCAATCACAGGGGCAGCAACAATTCGCTGTTTCAACCAAGAAAACCGCTTCTTGATGAAGATAATGGACCTCATAGACGATTATTCGCGTGTAGCCTTCCACAATTATGCCACGATGGAATGGTTGTCTGTGCGGATCAATTTTCTGTTCAATATTGCATTCTTCCTTGTTCTTGTCATTTTAGTGAGCTTGCCAAGGTCTGCCATTGACCCAAGTTTGGCAGGACTGGCAGCTACCTATGGTTTGAACCTCAGTGTTCTCCAAGCTTGGGTGATATGGAATTTGTGTAATGTGGAAAACAAAATGATATCAGTGGAGAGGATCCTTCAATTCACAAATATACCAAGTGAGGCACCACTAGTCATTGAAGATTGTATACCAAACCCTGAATGGCCAACTGATGGAAAAATTGAACTTCAAAACCTTAATGTTCAGTATGATCCAGCTCTTCCAATGGTTCTCAAAGGGATTAGTTGCACCTTCCCTGGACAGAAGAAAATTGGAGTTGTAGGCAGGACGGGGAGCGGAAAATCCACCTTGATCCAAGCTCTTTTTAGAGTAGTAGAGCCCTCTGGTGGACATATATTAATTGATGGTGTTGATATTTCTAAAATTGGTCTGCAAGACTTGAGATCAAGGTTGGGAATAATTCCACAAGACCCAACATTATTTCAAGGAACCATGAGGACTAATCTGGATCCTTTGCAACAGCATTCAGATCAAGAAATATGGGAGGTTCTGAATCAGTGTCGACTCACAGAGATGATTAGGCAAGACCAAAGGCTTCTTGATGCACCTGTTTCTGAAGATGGAGAAAACTGGAGTGTGGGACAGAGGCAGCTTGTGTGCCTGGCACGAGTACTCCTAAAGAAAAGGAGGATTTTGGTGTTGGATGAGGCTACAGCTTCTATTGATGCAGCGACAGATACTGTAATTCAGGAGACTATAAAAAGAGAAACAAGTGGATGCACTGTCATTACTGTGGCTCATCGAATTCCTACTGTTATCGACAATGACTTGGTTCTAGTCCTTGATGAAGGAAAGGTTTTAGAGTATGACTCTCCAGCTCGGTTACTTGAGGATAGCTCTTCTGCATTCTCCAAGTTGGTAGCAGAATACTCAAGGAGATCTTCCATGAGCAATTGCTTTAGAGACCTATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0010290 GO:0015399 GO:0015405 GO:0015431 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071997 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04071 ko04976 ko04977 ko05206 map01523 map01524 map02010 map04071 map04976 map04977 map05206

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

990

Amino Acids

110.2

Weight (kDa)

8.53

Isoelectric Point (pI)

37.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	18 - 193	1.2e-19	ABC transporter transmembrane region
ABC_membrane	PF00664	442 - 666	4.7e-30	ABC transporter transmembrane region
ABC_tran	PF00005	756 - 904	2.6e-29	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001408)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g24630
malus_domestica	MD13G1109600.v1.1 MD13G1110900.v1.1 MD14G1118700.v1.1 MD16G1109500.v1.1
prunus_persica	Prupe.1G235800_v2.0.a1 Prupe.1G236100_v2.0.a1
pyrus_communis	pycom11g17660 pycom13g09660
rosa_chinensis	RchiOBHm_Chr2g0131921 RchiOBHm_Chr4g0431141 RchiOBHm_Chr4g0431381 RchiOBHm_Chr4g0431551 RchiOBHm_Chr4g0431711 RchiOBHm_Chr5g0037421 RchiOBHm_Chr6g0306331
rosa_laevigata	RLG00000006895 RLG00000010802
rosa_multiflora	Rmu_co8343513.1_g000001 Rmu_sc0002271.1_g000023 Rmu_sc0002521.1_g000013 Rmu_sc0003473.1_g000005 Rmu_sc0005185.1_g000002 Rmu_sc0005258.1_g000003 Rmu_sc0013042.1_g000001
rosa_roxburghii	Rroxscaffold_3G00259720 Rroxscaffold_5G00372860 Rroxscaffold_5G00372880 Rroxscaffold_5G00372890 Rroxscaffold_5G00372970 Rroxscaffold_5G00373130 Rroxscaffold_7G00161860 Rroxscaffold_7G00161870
rosa_rugosa	Rorug04G0248700 Rorug04G0250100.1 Rorug04G0251800 Rorug04G0251800 Rorug04G0251900 Rorug04G0252000 Rorug04G0252100
rosa_samantha	Rh4AG308400 Rh4BG312300 Rh4BG312400 Rh4BG313800 Rh4BG316200 Rh4CG328600 Rh4DG308800 Rh4DG311000
rosa_wichuraiana	Rw4G026510 Rw4G026750 Rw4G026820 Rw5G016080 Rw6G040190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2158
AccB7I	CCANNNNNTGG	2 cut(s)	56, 2207
AccBSI	CCGCTC	1 cut(s)	2331
AccI	GTMKAC	4 cut(s)	868, 1584, 2182, 2557
AccII	CGCG	1 cut(s)	1894
AciI	CCGC	3 cut(s)	1852, 1939, 2331
AclWI	GGATC	8 cut(s)	642, 1949, 2122, 2135, 2240, 2341, 2498, 2511
AcoI	YGGCCR	2 cut(s)	249, 2198
AcsI	RAATTY	7 cut(s)	126, 564, 647, 757, 1770, 2086, 2799
AcuI	CTGAAG	3 cut(s)	437, 1482, 2631
AcyI	GRCGYC	1 cut(s)	464
AfaI	GTAC	2 cut(s)	116, 2667
AfiI	CCNNNNNNNGG	6 cut(s)	56, 1303, 2023, 2074, 2207, 2381
AhlI	ACTAGT	1 cut(s)	2164
AjnI	CCWGG	5 cut(s)	679, 1302, 1670, 2290, 2655
Alw21I	GWGCWC	3 cut(s)	1117, 1267, 1513
Alw26I	GTCTC	5 cut(s)	314, 716, 1481, 2741, 2952
AlwI	GGATC	8 cut(s)	642, 1949, 2122, 2135, 2240, 2341, 2498, 2511
AlwNI	CAGNNNCTG	4 cut(s)	536, 1208, 1309, 2735
AoxI	GGCC	5 cut(s)	156, 249, 1154, 1668, 2198
ApoI	RAATTY	7 cut(s)	126, 564, 647, 757, 1770, 2086, 2799
AseI	ATTAAT	2 cut(s)	69, 2393
Asp700I	GAANNNNTTC	1 cut(s)	267
AspS9I	GGNCC	4 cut(s)	47, 1154, 1211, 1873
AsuHPI	GGTGA	4 cut(s)	459, 887, 1040, 2089
AvaII	GGWCC	3 cut(s)	47, 1211, 1873
BaeI	ACNNNNGTAYC	2 cut(s)	609, 642
BalI	TGGCCA	2 cut(s)	251, 2200
BamHI	GGATCC	2 cut(s)	2127, 2503
BanI	GGYRCC	1 cut(s)	2158
BanII	GRGCYC	2 cut(s)	1117, 2376
BarI	GAAGNNNNNNTAC	2 cut(s)	2166, 2198
BauI	CACGAG	1 cut(s)	2661
BbsI	GAAGAC	1 cut(s)	1554
Bbv12I	GWGCWC	3 cut(s)	1117, 1267, 1513
BbvCI	CCTCAGC	1 cut(s)	392
BccI	CCATC	9 cut(s)	277, 1327, 1424, 1756, 1800, 1915, 2201, 2393, 2609
BcgI	CGANNNNNNTGC	2 cut(s)	493, 527
BciT130I	CCWGG	5 cut(s)	681, 1304, 1672, 2292, 2657
BciVI	GTATCC	1 cut(s)	803
BclI	TGATCA	2 cut(s)	75, 751
BcoDI	GTCTC	5 cut(s)	314, 716, 1481, 2741, 2952
BcuI	ACTAGT	1 cut(s)	2164
BfaI	CTAG	4 cut(s)	1542, 1746, 2165, 2831
BfmI	CTRYAG	2 cut(s)	1581, 2706
BfuI	GTATCC	1 cut(s)	803
BglII	AGATCT	1 cut(s)	2933
BmcAI	AGTACT	1 cut(s)	2667
Bme1390I	CCNGG	5 cut(s)	681, 1304, 1672, 2292, 2657
Bme18I	GGWCC	3 cut(s)	47, 1211, 1873
BmgT120I	GGNCC	4 cut(s)	47, 1154, 1211, 1873
BmiI	GGNNCC	5 cut(s)	1782, 2129, 2160, 2485, 2505
BmrFI	CCNGG	5 cut(s)	681, 1304, 1672, 2292, 2657
BmrI	ACTGGG	1 cut(s)	1268
BmsI	GCATC	5 cut(s)	1073, 1653, 2587, 2710, 2762
BmuI	ACTGGG	1 cut(s)	1268
BpiI	GAAGAC	1 cut(s)	1554
BplI	GAGNNNNNCTC	4 cut(s)	2849, 2881, 2876, 2908
BpmI	CTGGAG	2 cut(s)	2647, 2853
Bpu10I	CCTNAGC	1 cut(s)	392
BpuEI	CTTGAG	3 cut(s)	2455, 2903, 2911
BsaHI	GRCGYC	1 cut(s)	464
BsaI	GGTCTC	1 cut(s)	2952
BsaJI	CCNNGG	5 cut(s)	159, 1303, 1693, 2000, 2290
BsaWI	WCCGGW	1 cut(s)	1403
BsaXI	ACNNNNNCTCC	2 cut(s)	2652, 2682
Bsc4I	CCNNNNNNNGG	6 cut(s)	56, 1303, 2023, 2074, 2207, 2381
Bse1I	ACTGG	6 cut(s)	1213, 1214, 1274, 1334, 2037, 2630
Bse3DI	GCAATG	2 cut(s)	61, 210
BseBI	CCWGG	5 cut(s)	681, 1304, 1672, 2292, 2657
BseDI	CCNNGG	5 cut(s)	159, 1303, 1693, 2000, 2290
BseGI	GGATG	6 cut(s)	1099, 1278, 1338, 1767, 2704, 2777
BseLI	CCNNNNNNNGG	6 cut(s)	56, 1303, 2023, 2074, 2207, 2381
BseMI	GCAATG	2 cut(s)	61, 210
BseMII	CTCAG	7 cut(s)	383, 393, 453, 1001, 1484, 1815, 2071
BseNI	ACTGG	6 cut(s)	1213, 1214, 1274, 1334, 2037, 2630
BseRI	GAGGAG	1 cut(s)	421
BsgI	GTGCAG	1 cut(s)	1035
Bsh1236I	CGCG	1 cut(s)	1894
BshFI	GGCC	5 cut(s)	158, 251, 1156, 1670, 2200
BshNI	GGYRCC	1 cut(s)	2158
BsiHKAI	GWGCWC	3 cut(s)	1117, 1267, 1513
BsiSI	CCGG	1 cut(s)	1404
BslFI	GGGAC	4 cut(s)	931, 1256, 1645, 2649
BslI	CCNNNNNNNGG	6 cut(s)	56, 1303, 2023, 2074, 2207, 2381
BsmAI	GTCTC	5 cut(s)	314, 716, 1481, 2741, 2952
BsmBI	CGTCTC	1 cut(s)	716
BsmFI	GGGAC	4 cut(s)	931, 1256, 1645, 2649
BsmI	GAATGC	4 cut(s)	352, 1964, 2518, 2900
BsnI	GGCC	5 cut(s)	158, 251, 1156, 1670, 2200
Bso31I	GGTCTC	1 cut(s)	2952
Bsp1286I	GDGCHC	4 cut(s)	1117, 1267, 1513, 2376
BspACI	CCGC	3 cut(s)	1852, 1939, 2331
BspANI	GGCC	5 cut(s)	158, 251, 1156, 1670, 2200
BspCNI	CTCAG	7 cut(s)	384, 394, 452, 1000, 1483, 1814, 2070
BspFNI	CGCG	1 cut(s)	1894
BspHI	TCATGA	1 cut(s)	708
BspLI	GGNNCC	5 cut(s)	1782, 2129, 2160, 2485, 2505
BspPI	GGATC	8 cut(s)	642, 1949, 2122, 2135, 2240, 2341, 2498, 2511
BspQI	GCTCTTC	2 cut(s)	2259, 2899
BspT107I	GGYRCC	1 cut(s)	2158
BspTNI	GGTCTC	1 cut(s)	2952
BsrBI	CCGCTC	1 cut(s)	2331
BsrDI	GCAATG	2 cut(s)	61, 210
BsrI	ACTGG	6 cut(s)	1213, 1214, 1274, 1334, 2037, 2630
BssECI	CCNNGG	5 cut(s)	159, 1303, 1693, 2000, 2290
BssNAI	GTATAC	2 cut(s)	869, 2183
BssNI	GRCGYC	1 cut(s)	464
BssSI	CACGAG	1 cut(s)	2661
BssT1I	CCWWGG	3 cut(s)	159, 1693, 2000
Bst1107I	GTATAC	2 cut(s)	869, 2183
Bst2BI	CACGAG	1 cut(s)	2661
Bst2UI	CCWGG	5 cut(s)	681, 1304, 1672, 2292, 2657
Bst4CI	ACNGT	8 cut(s)	220, 538, 964, 1582, 2737, 2779, 2788, 2809
Bst6I	CTCTTC	6 cut(s)	147, 413, 1140, 1304, 2259, 2899
BstACI	GRCGYC	1 cut(s)	464
BstAPI	GCANNNNNTGC	1 cut(s)	1454
BstC8I	GCNNGC	4 cut(s)	335, 857, 1172, 1997
BstDEI	CTNAG	9 cut(s)	392, 402, 439, 860, 987, 1470, 1484, 1801, 2057
BstENI	CCTNNNNNAGG	1 cut(s)	1301
BstF5I	GGATG	6 cut(s)	1099, 1278, 1338, 1767, 2704, 2777
BstFNI	CGCG	1 cut(s)	1894
BstMAI	GTCTC	5 cut(s)	314, 716, 1481, 2741, 2952
BstMWI	GCNNNNNNNGC	8 cut(s)	197, 212, 265, 388, 852, 1454, 1616, 2033
BstNI	CCWGG	5 cut(s)	681, 1304, 1672, 2292, 2657
BstNSI	RCATGY	2 cut(s)	337, 438
BstSCI	CCNGG	5 cut(s)	679, 1302, 1670, 2290, 2655
BstSFI	CTRYAG	2 cut(s)	1581, 2706
BstUI	CGCG	1 cut(s)	1894
BstV2I	GAAGAC	1 cut(s)	1554
BstX2I	RGATCY	3 cut(s)	2127, 2503, 2933
BstXI	CCANNNNNNTGG	2 cut(s)	223, 283
BstYI	RGATCY	3 cut(s)	2127, 2503, 2933
BstZ17I	GTATAC	2 cut(s)	869, 2183
BsuI	GTATCC	1 cut(s)	803
BsuRI	GGCC	5 cut(s)	158, 251, 1156, 1670, 2200
BtsCI	GGATG	6 cut(s)	1099, 1278, 1338, 1767, 2704, 2777
BtsIMutI	CAGTG	8 cut(s)	636, 1221, 1478, 1578, 2065, 2124, 2558, 2775
Cac8I	GCNNGC	4 cut(s)	335, 857, 1172, 1997
CaiI	CAGNNNCTG	4 cut(s)	536, 1208, 1309, 2735
CciI	TCATGA	1 cut(s)	708
Cfr13I	GGNCC	4 cut(s)	47, 1154, 1211, 1873
CseI	GACGC	1 cut(s)	453
Csp6I	GTAC	2 cut(s)	115, 2666
CviQI	GTAC	2 cut(s)	115, 2666
DdeI	CTNAG	9 cut(s)	392, 402, 439, 860, 987, 1470, 1484, 1801, 2057
DraI	TTTAAA	2 cut(s)	345, 762
EaeI	YGGCCR	2 cut(s)	249, 2198
Eam1104I	CTCTTC	6 cut(s)	147, 413, 1140, 1304, 2259, 2899
EarI	CTCTTC	6 cut(s)	147, 413, 1140, 1304, 2259, 2899
Ecl136II	GAGCTC	1 cut(s)	1115
Eco130I	CCWWGG	3 cut(s)	159, 1693, 2000
Eco24I	GRGCYC	2 cut(s)	1117, 2376
Eco31I	GGTCTC	1 cut(s)	2952
Eco32I	GATATC	1 cut(s)	2115
Eco47I	GGWCC	3 cut(s)	47, 1211, 1873
Eco53kI	GAGCTC	1 cut(s)	1115
Eco57I	CTGAAG	3 cut(s)	437, 1482, 2631
EcoICRI	GAGCTC	1 cut(s)	1115
EcoNI	CCTNNNNNAGG	1 cut(s)	1301
EcoO109I	RGGNCCY	1 cut(s)	1154
EcoRI	GAATTC	4 cut(s)	564, 647, 1770, 2799
EcoRII	CCWGG	5 cut(s)	679, 1302, 1670, 2290, 2655
EcoRV	GATATC	1 cut(s)	2115
EcoT14I	CCWWGG	3 cut(s)	159, 1693, 2000
EcoT22I	ATGCAT	2 cut(s)	506, 739
EcoT38I	GRGCYC	2 cut(s)	1117, 2376
ErhI	CCWWGG	3 cut(s)	159, 1693, 2000
Esp3I	CGTCTC	1 cut(s)	716
FalI	AAGNNNNNCTT	6 cut(s)	252, 284, 1668, 1700, 2920, 2952
FaqI	GGGAC	4 cut(s)	931, 1256, 1645, 2649
FauNDI	CATATG	1 cut(s)	1715
FbaI	TGATCA	2 cut(s)	75, 751
FblI	GTMKAC	4 cut(s)	868, 1584, 2182, 2557
FokI	GGATG	6 cut(s)	1106, 1265, 1345, 1774, 2711, 2784
FriOI	GRGCYC	2 cut(s)	1117, 2376
FspBI	CTAG	4 cut(s)	1542, 1746, 2165, 2831
GsuI	CTGGAG	2 cut(s)	2647, 2853
HaeIII	GGCC	5 cut(s)	158, 251, 1156, 1670, 2200
HapII	CCGG	1 cut(s)	1404
HgaI	GACGC	1 cut(s)	453
Hin1I	GRCGYC	1 cut(s)	464
HincII	GTYRAC	1 cut(s)	2558
HindII	GTYRAC	1 cut(s)	2558
HindIII	AAGCTT	4 cut(s)	266, 924, 1172, 2070
HpaII	CCGG	1 cut(s)	1404
HphI	GGTGA	4 cut(s)	459, 887, 1040, 2089
Hpy166II	GTNNAC	7 cut(s)	85, 869, 1031, 1585, 2183, 2384, 2558
Hpy188I	TCNGA	7 cut(s)	319, 981, 1508, 1804, 2524, 2547, 2611
Hpy8I	GTNNAC	7 cut(s)	85, 869, 1031, 1585, 2183, 2384, 2558
HpyCH4III	ACNGT	8 cut(s)	220, 538, 964, 1582, 2737, 2779, 2788, 2809
HpyCH4IV	ACGT	1 cut(s)	87
HpyF10VI	GCNNNNNNNGC	8 cut(s)	197, 212, 265, 388, 852, 1454, 1616, 2033
HpyF3I	CTNAG	9 cut(s)	392, 402, 439, 860, 987, 1470, 1484, 1801, 2057
HpySE526I	ACGT	1 cut(s)	87
Hsp92I	GRCGYC	1 cut(s)	464
Ksp22I	TGATCA	2 cut(s)	75, 751
LguI	GCTCTTC	2 cut(s)	2259, 2899
LmnI	GCTCC	2 cut(s)	1786, 2328
LweI	GCATC	5 cut(s)	1073, 1653, 2587, 2710, 2762
MaeI	CTAG	4 cut(s)	1542, 1746, 2165, 2831
MaeII	ACGT	1 cut(s)	87
MaeIII	GTNAC	5 cut(s)	310, 465, 1187, 1243, 2877
MbiI	CCGCTC	1 cut(s)	2331
MfeI	CAATTG	2 cut(s)	665, 2947
MflI	RGATCY	3 cut(s)	2127, 2503, 2933
MhlI	GDGCHC	4 cut(s)	1117, 1267, 1513, 2376
MlsI	TGGCCA	2 cut(s)	251, 2200
MluNI	TGGCCA	2 cut(s)	251, 2200
MlyI	GAGTC	5 cut(s)	316, 1195, 1701, 2553, 2858
MmeI	TCCRAC	3 cut(s)	1657, 1747, 2676
Mox20I	TGGCCA	2 cut(s)	251, 2200
Mph1103I	ATGCAT	2 cut(s)	506, 739
MroXI	GAANNNNTTC	1 cut(s)	267
MscI	TGGCCA	2 cut(s)	251, 2200
MslI	CAYNNNNRTG	5 cut(s)	1471, 1911, 1988, 2567, 2786
Msp20I	TGGCCA	2 cut(s)	251, 2200
MspI	CCGG	1 cut(s)	1404
MspR9I	CCNGG	5 cut(s)	681, 1304, 1672, 2292, 2657
MunI	CAATTG	2 cut(s)	665, 2947
Mva1269I	GAATGC	4 cut(s)	352, 1964, 2518, 2900
MvaI	CCWGG	5 cut(s)	681, 1304, 1672, 2292, 2657
MvnI	CGCG	1 cut(s)	1894
MwoI	GCNNNNNNNGC	8 cut(s)	197, 212, 265, 388, 852, 1454, 1616, 2033
NdeI	CATATG	1 cut(s)	1715
NlaIV	GGNNCC	5 cut(s)	1782, 2129, 2160, 2485, 2505
NmuCI	GTSAC	2 cut(s)	465, 1187
NsiI	ATGCAT	2 cut(s)	506, 739
NspI	RCATGY	2 cut(s)	337, 438
PaeI	GCATGC	1 cut(s)	337
PagI	TCATGA	1 cut(s)	708
PciSI	GCTCTTC	2 cut(s)	2259, 2899
PctI	GAATGC	4 cut(s)	352, 1964, 2518, 2900
PdmI	GAANNNNTTC	1 cut(s)	267
PfeI	GAWTC	9 cut(s)	296, 303, 362, 766, 880, 949, 1548, 1805, 2548
PflMI	CCANNNNNTGG	2 cut(s)	56, 2207
PleI	GAGTC	5 cut(s)	316, 1194, 1701, 2553, 2858
PpsI	GAGTC	5 cut(s)	316, 1194, 1701, 2553, 2858
PshBI	ATTAAT	2 cut(s)	69, 2393
Psp124BI	GAGCTC	1 cut(s)	1117
Psp6I	CCWGG	5 cut(s)	679, 1302, 1670, 2290, 2655
PspGI	CCWGG	5 cut(s)	679, 1302, 1670, 2290, 2655
PspN4I	GGNNCC	5 cut(s)	1782, 2129, 2160, 2485, 2505
PspPI	GGNCC	4 cut(s)	47, 1154, 1211, 1873
PstNI	CAGNNNCTG	4 cut(s)	536, 1208, 1309, 2735
PsuI	RGATCY	3 cut(s)	2127, 2503, 2933
RsaI	GTAC	2 cut(s)	116, 2667
RsaNI	GTAC	2 cut(s)	115, 2666
RseI	CAYNNNNRTG	5 cut(s)	1471, 1911, 1988, 2567, 2786
SacI	GAGCTC	1 cut(s)	1117
SalI	GTCGAC	1 cut(s)	2556
SapI	GCTCTTC	2 cut(s)	2259, 2899
Sau96I	GGNCC	4 cut(s)	47, 1154, 1211, 1873
ScaI	AGTACT	1 cut(s)	2667
SchI	GAGTC	5 cut(s)	316, 1195, 1701, 2553, 2858
ScrFI	CCNGG	5 cut(s)	681, 1304, 1672, 2292, 2657
SduI	GDGCHC	4 cut(s)	1117, 1267, 1513, 2376
SfaNI	GCATC	5 cut(s)	1073, 1653, 2587, 2710, 2762
SfcI	CTRYAG	2 cut(s)	1581, 2706
SinI	GGWCC	3 cut(s)	47, 1211, 1873
SmiMI	CAYNNNNRTG	5 cut(s)	1471, 1911, 1988, 2567, 2786
SmlI	CTYRAG	3 cut(s)	2434, 2882, 2926
SmoI	CTYRAG	3 cut(s)	2434, 2882, 2926
SpeI	ACTAGT	1 cut(s)	2164
SphI	GCATGC	1 cut(s)	337
SsiI	CCGC	3 cut(s)	1852, 1939, 2331
SspI	AATATT	1 cut(s)	1960
SspMI	CTAG	4 cut(s)	1542, 1746, 2165, 2831
SstI	GAGCTC	1 cut(s)	1117
StyD4I	CCNGG	5 cut(s)	679, 1302, 1670, 2290, 2655
StyI	CCWWGG	3 cut(s)	159, 1693, 2000
TaaI	ACNGT	8 cut(s)	220, 538, 964, 1582, 2737, 2779, 2788, 2809
TaiI	ACGT	1 cut(s)	90
TaqI	TCGA	6 cut(s)	32, 513, 1527, 2557, 2797, 2814
TatI	WGTACW	1 cut(s)	2665
TfiI	GAWTC	9 cut(s)	296, 303, 362, 766, 880, 949, 1548, 1805, 2548
TscAI	CASTG	8 cut(s)	636, 1221, 1478, 1585, 2065, 2124, 2558, 2782
TseFI	GTSAC	2 cut(s)	465, 1187
Tsp45I	GTSAC	2 cut(s)	465, 1187
TspDTI	ATGAA	6 cut(s)	110, 260, 1017, 1411, 1877, 2856
TspRI	CASTG	8 cut(s)	636, 1221, 1478, 1585, 2065, 2124, 2558, 2782
Van91I	CCANNNNNTGG	2 cut(s)	56, 2207
VpaK11BI	GGWCC	3 cut(s)	47, 1211, 1873
VspI	ATTAAT	2 cut(s)	69, 2393
XagI	CCTNNNNNAGG	1 cut(s)	1301
XapI	RAATTY	7 cut(s)	126, 564, 647, 757, 1770, 2086, 2799
XceI	RCATGY	2 cut(s)	337, 438
XcmI	CCANNNNNNNNNTGG	3 cut(s)	942, 1423, 2193
XmiI	GTMKAC	4 cut(s)	868, 1584, 2182, 2557
XmnI	GAANNNNTTC	1 cut(s)	267
XspI	CTAG	4 cut(s)	1542, 1746, 2165, 2831
ZrmI	AGTACT	1 cut(s)	2667
Zsp2I	ATGCAT	2 cut(s)	506, 739

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.