Rroxscaffold_5G00373130

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
54400126 .. 54408027
7902 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00373130.1

Sequence Viewer

Length: 4374 bp
ATGGAGATCTCTCTGGAAATTGTCAATGTTGGGTTTTTCATAGTGTTATTGACGTGGGTTTTGCTAGATACACTGAGAAGAAGAAGAGGAGATGGTACCGAAAATGAGACATATTTGAGAGACAGAGCAAGCATAGGATGTAAAGGTTTTGCTTTGATAACCCTTATTGCAAATGCCTTAATCTCAGTGTTCTACGTTGTTTTTGGAATTTATGATTACTGTGGTGGTGGAAATGTAAGTTTGAAATCAATCTTTTCTGGGATGACTTGGGTTTTGGCAACAATAGTGACGATCTATTCCAAGAACAGAGGTTTTAGTGAGCACAAAAGGTGGCCTAGCATCCTCATTTTTTGGTGGATCTTTTCCTTCATTTTTTTCTCACTTTCTGTGTGCCTTTACTTCATCACCCACTACTTGGAATCTTCAAAGTTGCCAGATATTCTTCCAAAGGCTAGCATAGTCGAATTCGCTTCCTTTCCTCTGTCAATGTTACTTTGTTGCAATGCTTTAAGCTATGTCCAGAAAGACGGTGATCTTGAAGAACCATTACTCGAGAAGGAGTTTGAAATTCACACTGATAGTTACGGTGATGCTGGGATTTGGAGCAAAGTCACATTCCGATGGCTAAATCCACTTTTCCAGAGGGGTCGAAACCAAAAGCTGGAATTATACCATATACCATCTGTCCCTCTTTCAGAAAGAGCAGCAAATGCTTCAGCTTTGCTCGAAGAATCATTCCGGAAACACAAGATGGAAGATTCTTCATTGCCAAAAGCCATAATTCGGGCCGTATGGAAATCATTAGCTGTAAATGCAGTTTTTGCAGGAGTTAATACTATTGCATCATATATGGGACCATTCCTAATTACAAACTTTGTGAACTATTTACTGGAAAAGCATGATGATTCAAGCATTCATCATGGATTGATTCTTGCATTTATATTCTTCATTGCGAAGACAATGGAATCACTGAGTCAAAGGCAGTGGTATTTTGGTGCTCAGATAATTGGTGTACGCGTTCGAGCAGCTCTCAGTGTGTTGATTTACAAGAAGTCTATTTTGATCAAGTATTCTGGTCCAAGCAATGGGAAAATGATTAATTTGATCAATGTGGATGTAGAAAGAATTGGAGACTTCTGCTGGTACATTCATGGAATTTGGTTGCTTCCTCTTCAAGTCTTCTTGGCCTTGGTTATCCTTTACAGGAATCTCGGCGCTGCCCCCTCTGCTGCTGCTCTTATTGCCACAGTTTTGGTCATGGTTTGCAACACACCTTTGGCCAACATGCAAGAAAGGCTTCATTCCAAGATGATGGAGGCGAAGGATTCACGAATTAAAGTAACATCAGAGACTCTCAAAAGCATGCGAGTTTTGAAGCTGCATTCTTGGGAATCCACATTCTTGAAGAAGCTGCTTCAGCTGAGGGAAACTGAGAGGAGTTGGCTGAAGAGATACCTCTATACATGCTCAGTAGTGGCTTTTCTCTTCTGGGCTTCACCTACTCTGGTTTCAGTTGCCACTTTTGGTGTATGCATTATACTCAATACACCATTAAACACAGGAACTGTCTTGTCTGCTTTGGCTACTTTTAGAATTCTTCAAGAGCCCATCTACAACCTCCCAGAGCTCATTTCCATGATTGCTCAAACAAAGGTATCAGTTGATCGTGTCAAAGAATTCATCAAAGAATATCAATTGAAGCTAATTCCTGGTCATACTTCAAAAGAATCCAACGTCATGATTGTAATTGAGACAGGAGAATATGCATGGAAAACAAGCGATCAGAACTTAAAGAAGCCTACAATCAAAATTGTGGAGAAGATAGAGATAATGAAAGGATACAAGGTAGCAATTTGCGGTTCTGTTGGTTCGGGCAAGTCAAGCTTACTAAGTAGTATACTTGGGGAGATTCCCAAAATTTCTGGGGTAGGAGCAAAGGTTTATGGGACAAAAGCTTATGTTCCACAAAGTTCTTGGATTCAAACTGGAACTGTAAGGGAGAATGTGTTGTTTGGCAAGGAGATGATTGAGGGTTATTATGAGAATGTTTTGGAGGCTTGTGCTTTGGACCAGGATGTCAGAATGTGGGAAGATGGAGATTTGACTATAGTGGGGGAGAGAGGGATGAACCTAAGTGGGGGAGAAAAACAAAGGATTCAACTGGCAAGAGCAGTCTATAGTGATTCCGATGTATATATCTTGGATGATCCTTTTAGTGCTGTTGATGCACATACAGGAACACACTTGTTCAAGAAATGTCTCTTGCAACACTTGTCTCTAAAGACTGTCATCTATGCTACCCACCAATTAGAATTTCTAGAAGCAGCAGACCTTGTCTTGGTAATGAAAGGTGGTCAGATTGCTCAGTCTGGAAAATATGAAGATTTGATTGCCGACCTCAATGGTGAACTTGTCAGACAAATGGCTGCACATAGGAAATCGTTAGACCAAGTTAACATATGCCAAATAGATGTTTCCTTAAAGAGTAGACCTCATCAAGTTAATCTAATAGAGGTTGTGGAAGAGAAAGGGTTTTTCAACAATGGCAAGCTTCCGGAAAAGAGTCAAGAAGAAGAAGCAGAAACTGGTCCAGTGAAATTGAGTGTTTATTCCACCTTTGTAACTTCTGCTTATGGAGGTGCTCTTGTCCCAGTTATCCTTCTCTGCCAAGTCCTCTTCCAGGGGCTGCAAATGGGCAGCAACTACTGGATGGCTTGGGGAACAGAGAAGGAAGGTAGGGTCAGTAGAGAGCGATTGATATGGGTATTTATTATGTTGTCTGGAGGGAGCTCCATCTTCATATTGGGAAGGGCAGTTTTTCTGGCAACTATTGCTATACAGACTGCTCAGAGTCTCTTCCTTGGAATGATAACTTCAGTATTCCGAGCACCCATCTCATTTTTCGACTCCACTCCTTCTAGCCGAATCCTGAATAGGTCTTCCACGGATCAAAGCACTGTAGACATGGACATTCCTTATAGATTAGCTGGATTAGCATTTGCACTGATCCAACTAATAAGCATCATAGTCCTTATGTCTCAAGTGGCCTGGCAAGTTTTCCTTCTCTTCCTCGGGGTTCTTGGACTCTCCATATGGTATCAAGCCTATTACATTACCACAGCTAGAGAACTTGCGAGGATGGTTGGAATTCGAAAGGCTCCAATCCTCCATCACTTCTCAGAATCGATCACAGGGGCAGCAACAATTCGTTGTTTCAACCAAGAAAACCGCTTCTTGATGAAGATAATGAACCTCATTGACGATTATTCTAGTGTAGCCTTTCACAATTATGCCACAATGGAATGGCTATCGGTCCGAATCAATTTTCTGTTCAACCTTGTATTCTTCCTTGTTCTTGTCATTTTAGTGAGCTTGCCAAGGTCTGCCATTAAGCCTAGTAAGCCTCTTCAACCCCTCACGTTTAGTTTGGCAGGACTGGCAGCTACCTATGGTTTGAACCTCAATGTTCTCCAGGCTTGGGTGATATGGAATTTGTGTAATGTGGAAAACAAAATGATATCAGTGGAGAGGATCCTTCAATTCACAAATATTCCAAGTGAGGGACCACTAGTCATTGAGGATTGTAGACCAAACCCTGAATGGCCAACAGTCGGAAAAATTGAACTTGATAACCTTCATGTTCAGTATGATCCAGCTCTTCCAATGGTTCTCAAAGGGATCAGTTGCACCTTCCCTGGACAAAAGAAAATTGGAGTCGTGGGCAGGACGGGGAGTGGGAAATCTACCTTGATCCAAGCTCTTTTTAGAGTAGTAGAGCCTTCTGGTGGACATATATTAATAGATGGTGTTGATATTTCTAAAATAGGTCTGCAAGACTTGAGATCAAGGTTGGGAATAATTCCACAAGACCCAACATTATTCCAAGGAACCATGAGGACTAATCTGGATCCTCTGCAACAGCATTCAGATCAAGAAATCTGGGAGGTTCTCAATCAGTGTCGACTTGCAGAGATAGTTAGGCAAGACCAAAGGCTTCTTGATGCACCTGTTGCTGAAGATGGAGAAAATTGGAGTGTGGGACAGAGGCAGCTTGTGTGCCTGGCACGAGTACTCCTAAAGAAAAGGAGGATTCTGGTGTTGGATGAGGCTACAGCTTCTATTGATACCGCCACAGATGTTGTAATTCAGGAGACTATAAGGAGAGAAACAAGTGGATGCACTGTCATTACTGTGGCTCATCGAATTCCTACTGTTATTGACAATGACTTGGTTCTAGTCCTTGATGAAGGAAAGGTTTTAGAGTATGACTCTCCAGCTCGGTTACTTGAGGATAGTTCTTCTGCATTCTCCAAGTTGGTGGCAGAATACTCGAGGAGATCTTCCATGAGCAACTGCTTTAGAGACCTATCTTGA

Protein Analysis

1457

Amino Acids

163.4

Weight (kDa)

8.02

Isoelectric Point (pI)

37.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 271 - 536 2.6e-23 ABC transporter transmembrane region
ABC_tran PF00005 609 - 738 5e-15 ABC transporter
ABC_membrane PF00664 901 - 1125 3.5e-29 ABC transporter transmembrane region
ABC_tran PF00005 1224 - 1372 9e-29 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2075
Acc65I GGTACC 1 cut(s) 95
AccB1I GGYRCC 1 cut(s) 95
AccB7I CCANNNNNTGG 3 cut(s) 415, 661, 1085
AccI GTMKAC 5 cut(s) 1897, 2488, 2961, 3586, 3961
AccII CGCG 1 cut(s) 1017
AccIII TCCGGA 2 cut(s) 738, 2554
AciI CCGC 3 cut(s) 1857, 3229, 4128
AcoI YGGCCR 2 cut(s) 1278, 3602
AcuI CTGAAG 5 cut(s) 699, 1400, 1466, 2859, 4035
AfaI GTAC 4 cut(s) 97, 1014, 1145, 4071
AflIII ACRYGT 1 cut(s) 1015
AhdI GACNNNNNGTC 1 cut(s) 3569
AhlI ACTAGT 1 cut(s) 3568
AjiI CACGTC 1 cut(s) 54
AjnI CCWGG 7 cut(s) 1708, 2070, 2679, 3047, 3471, 3694, 4059
AjuI GAANNNNNNNTTGG 2 cut(s) 2298, 2330
Alw21I GWGCWC 6 cut(s) 324, 1000, 1629, 2644, 2792, 2890
AlwNI CAGNNNCTG 3 cut(s) 1565, 2585, 2686
Ama87I CYCGRG 3 cut(s) 551, 3071, 4330
Aor13HI TCCGGA 2 cut(s) 738, 2554
AoxI GGCC 6 cut(s) 332, 786, 1185, 1278, 3045, 3602
ArsI GACNNNNNNTTYG 4 cut(s) 43, 75, 256, 288
AseI ATTAAT 2 cut(s) 1098, 3797
Asp700I GAANNNNTTC 1 cut(s) 1296
Asp718I GGTACC 1 cut(s) 95
AspLEI GCGC 1 cut(s) 1217
AspS9I GGNCC 7 cut(s) 786, 854, 1076, 2068, 2588, 3313, 3563
AsuHPI GGTGA 6 cut(s) 397, 542, 599, 1488, 2417, 3493
AsuII TTCGAA 1 cut(s) 3151
AsuNHI GCTAGC 1 cut(s) 452
AvaI CYCGRG 3 cut(s) 551, 3071, 4330
AvaII GGWCC 6 cut(s) 854, 1076, 2068, 2588, 3313, 3563
BaeI ACNNNNGTAYC 2 cut(s) 1638, 1671
BalI TGGCCA 2 cut(s) 1280, 3604
BamHI GGATCC 2 cut(s) 3531, 3907
BanI GGYRCC 1 cut(s) 95
BanII GRGCYC 3 cut(s) 1608, 1629, 2792
BarI GAAGNNNNNNTAC 2 cut(s) 531, 563
BauI CACGAG 1 cut(s) 4065
BbsI GAAGAC 3 cut(s) 962, 1171, 2931
Bbv12I GWGCWC 6 cut(s) 324, 1000, 1629, 2644, 2792, 2890
BbvCI CCTCAGC 1 cut(s) 1421
BceAI ACGGC 1 cut(s) 773
BcgI CGANNNNNNTGC 2 cut(s) 4311, 4345
BciT130I CCWGG 7 cut(s) 1710, 2072, 2681, 3049, 3473, 3696, 4061
BciVI GTATCC 1 cut(s) 1832
BclI TGATCA 2 cut(s) 1062, 1104
BcuI ACTAGT 1 cut(s) 3568
BfmI CTRYAG 4 cut(s) 2106, 2176, 2958, 4110
BfoI RGCGCY 1 cut(s) 1218
BfuI GTATCC 1 cut(s) 1832
BglII AGATCT 2 cut(s) 6, 4337
BmcAI AGTACT 1 cut(s) 4071
Bme1390I CCNGG 7 cut(s) 1710, 2072, 2681, 3049, 3473, 3696, 4061
Bme18I GGWCC 6 cut(s) 854, 1076, 2068, 2588, 3313, 3563
BmeRI GACNNNNNGTC 1 cut(s) 3569
BmeT110I CYCGRG 3 cut(s) 551, 3071, 4330
BmgBI CACGTC 1 cut(s) 54
BmgT120I GGNCC 7 cut(s) 786, 854, 1076, 2068, 2588, 3313, 3563
BmiI GGNNCC 7 cut(s) 97, 855, 3159, 3533, 3564, 3889, 3909
BmrFI CCNGG 7 cut(s) 1710, 2072, 2681, 3049, 3473, 3696, 4061
BmrI ACTGGG 1 cut(s) 2645
BmsI GCATC 7 cut(s) 348, 580, 851, 2215, 3030, 3991, 4166
BmtI GCTAGC 1 cut(s) 456
BmuI ACTGGG 1 cut(s) 2645
BpiI GAAGAC 3 cut(s) 962, 1171, 2931
BplI GAGNNNNNCTC 6 cut(s) 1014, 1046, 2476, 2508, 4253, 4285
BpmI CTGGAG 3 cut(s) 2802, 3455, 4257
Bpu10I CCTNAGC 1 cut(s) 1421
Bpu14I TTCGAA 1 cut(s) 3151
BpuEI CTTGAG 3 cut(s) 3024, 3859, 4307
Bsa29I ATCGAT 1 cut(s) 3185
BsaI GGTCTC 1 cut(s) 4356
BsaJI CCNNGG 8 cut(s) 1188, 2680, 2860, 2943, 3070, 3377, 3694, 3883
BsaWI WCCGGW 2 cut(s) 738, 2554
BsaXI ACNNNNNCTCC 6 cut(s) 1923, 1953, 1991, 2021, 4056, 4086
Bse1I ACTGG 8 cut(s) 894, 1990, 2166, 2590, 2591, 2651, 2711, 3441
Bse3DI GCAATG 4 cut(s) 508, 764, 948, 1090
BseAI TCCGGA 2 cut(s) 738, 2554
BseBI CCWGG 7 cut(s) 1710, 2072, 2681, 3049, 3473, 3696, 4061
BseCI ATCGAT 1 cut(s) 3185
BseDI CCNNGG 8 cut(s) 1188, 2680, 2860, 2943, 3070, 3377, 3694, 3883
BseMI GCAATG 4 cut(s) 508, 764, 948, 1090
BseNI ACTGG 8 cut(s) 894, 1990, 2166, 2590, 2591, 2651, 2711, 3441
BseRI GAGGAG 3 cut(s) 102, 1450, 4348
BseYI CCCAGC 1 cut(s) 593
BsgI GTGCAG 1 cut(s) 2412
Bsh1236I CGCG 1 cut(s) 1017
BshFI GGCC 6 cut(s) 334, 788, 1187, 1280, 3047, 3604
BshNI GGYRCC 1 cut(s) 95
BshVI ATCGAT 1 cut(s) 3185
BsiHKAI GWGCWC 6 cut(s) 324, 1000, 1629, 2644, 2792, 2890
BsiHKCI CYCGRG 3 cut(s) 551, 3071, 4330
BsiSI CCGG 2 cut(s) 739, 2555
BslFI GGGAC 6 cut(s) 671, 867, 1960, 2633, 3576, 4053
BsmFI GGGAC 6 cut(s) 671, 867, 1960, 2633, 3576, 4053
BsmI GAATGC 4 cut(s) 912, 1381, 3922, 4304
BsnI GGCC 6 cut(s) 334, 788, 1187, 1280, 3047, 3604
Bso31I GGTCTC 1 cut(s) 4356
BsoBI CYCGRG 3 cut(s) 551, 3071, 4330
Bsp119I TTCGAA 1 cut(s) 3151
Bsp1286I GDGCHC 7 cut(s) 324, 1000, 1608, 1629, 2644, 2792, 2890
Bsp13I TCCGGA 2 cut(s) 738, 2554
BspACI CCGC 3 cut(s) 1857, 3229, 4128
BspANI GGCC 6 cut(s) 334, 788, 1187, 1280, 3047, 3604
BspDI ATCGAT 1 cut(s) 3185
BspEI TCCGGA 2 cut(s) 738, 2554
BspFNI CGCG 1 cut(s) 1017
BspHI TCATGA 1 cut(s) 1737
BspLI GGNNCC 7 cut(s) 97, 855, 3159, 3533, 3564, 3889, 3909
BspOI GCTAGC 1 cut(s) 456
BspQI GCTCTTC 1 cut(s) 3663
BspT104I TTCGAA 1 cut(s) 3151
BspT107I GGYRCC 1 cut(s) 95
BspTNI GGTCTC 1 cut(s) 4356
BsrDI GCAATG 4 cut(s) 508, 764, 948, 1090
BsrI ACTGG 8 cut(s) 894, 1990, 2166, 2590, 2591, 2651, 2711, 3441
BssECI CCNNGG 8 cut(s) 1188, 2680, 2860, 2943, 3070, 3377, 3694, 3883
BssNAI GTATAC 1 cut(s) 1898
BssSI CACGAG 1 cut(s) 4065
BssT1I CCWWGG 4 cut(s) 1188, 2860, 3377, 3883
Bst1107I GTATAC 1 cut(s) 1898
Bst2BI CACGAG 1 cut(s) 4065
Bst2UI CCWGG 7 cut(s) 1710, 2072, 2681, 3049, 3473, 3696, 4061
BstAPI GCANNNNNTGC 4 cut(s) 710, 821, 2831, 4010
BstBI TTCGAA 1 cut(s) 3151
BstC8I GCNNGC 5 cut(s) 130, 454, 1364, 2549, 3374
BstDSI CCRYGG 1 cut(s) 2943
BstENI CCTNNNNNAGG 1 cut(s) 2678
BstFNI CGCG 1 cut(s) 1017
BstH2I RGCGCY 1 cut(s) 1218
BstHHI GCGC 1 cut(s) 1217
BstNI CCWGG 7 cut(s) 1710, 2072, 2681, 3049, 3473, 3696, 4061
BstNSI RCATGY 3 cut(s) 1288, 1366, 1467
BstSCI CCNGG 7 cut(s) 1708, 2070, 2679, 3047, 3471, 3694, 4059
BstSFI CTRYAG 4 cut(s) 2106, 2176, 2958, 4110
BstUI CGCG 1 cut(s) 1017
BstV2I GAAGAC 3 cut(s) 962, 1171, 2931
BstX2I RGATCY 5 cut(s) 6, 357, 3531, 3907, 4337
BstXI CCANNNNNNTGG 3 cut(s) 1252, 1312, 4318
BstYI RGATCY 5 cut(s) 6, 357, 3531, 3907, 4337
BstZ17I GTATAC 1 cut(s) 1898
Bsu15I ATCGAT 1 cut(s) 3185
BsuI GTATCC 1 cut(s) 1832
BsuRI GGCC 6 cut(s) 334, 788, 1187, 1280, 3047, 3604
BsuTUI ATCGAT 1 cut(s) 3185
BtgI CCRYGG 1 cut(s) 2943
BtrI CACGTC 1 cut(s) 54
BtsI GCAGTG 1 cut(s) 989
Cac8I GCNNGC 5 cut(s) 130, 454, 1364, 2549, 3374
CaiI CAGNNNCTG 3 cut(s) 1565, 2585, 2686
CciI TCATGA 1 cut(s) 1737
CfoI GCGC 1 cut(s) 1217
Cfr13I GGNCC 7 cut(s) 786, 854, 1076, 2068, 2588, 3313, 3563
ClaI ATCGAT 1 cut(s) 3185
CpoI CGGWCCG 1 cut(s) 3313
Csp6I GTAC 4 cut(s) 96, 1013, 1144, 4070
CspCI CAANNNNNGTGG 4 cut(s) 965, 1000, 4120, 4155
CspI CGGWCCG 1 cut(s) 3313
CviQI GTAC 4 cut(s) 96, 1013, 1144, 4070
DrdI GACNNNNNNGTC 1 cut(s) 2075
DriI GACNNNNNGTC 1 cut(s) 3569
DseDI GACNNNNNNGTC 1 cut(s) 2075
EaeI YGGCCR 2 cut(s) 1278, 3602
Eam1105I GACNNNNNGTC 1 cut(s) 3569
Ecl136II GAGCTC 2 cut(s) 1627, 2790
Eco130I CCWWGG 4 cut(s) 1188, 2860, 3377, 3883
Eco24I GRGCYC 3 cut(s) 1608, 1629, 2792
Eco31I GGTCTC 1 cut(s) 4356
Eco32I GATATC 1 cut(s) 3519
Eco47I GGWCC 6 cut(s) 854, 1076, 2068, 2588, 3313, 3563
Eco53kI GAGCTC 2 cut(s) 1627, 2790
Eco57I CTGAAG 5 cut(s) 699, 1400, 1466, 2859, 4035
Eco88I CYCGRG 3 cut(s) 551, 3071, 4330
EcoICRI GAGCTC 2 cut(s) 1627, 2790
EcoNI CCTNNNNNAGG 1 cut(s) 2678
EcoRI GAATTC 5 cut(s) 464, 1593, 1676, 3147, 4203
EcoRII CCWGG 7 cut(s) 1708, 2070, 2679, 3047, 3471, 3694, 4059
EcoRV GATATC 1 cut(s) 3519
EcoT14I CCWWGG 4 cut(s) 1188, 2860, 3377, 3883
EcoT22I ATGCAT 2 cut(s) 1535, 1768
EcoT38I GRGCYC 3 cut(s) 1608, 1629, 2792
ErhI CCWWGG 4 cut(s) 1188, 2860, 3377, 3883
FalI AAGNNNNNCTT 6 cut(s) 1281, 1313, 1868, 1900, 3045, 3077
FaqI GGGAC 6 cut(s) 671, 867, 1960, 2633, 3576, 4053
FauNDI CATATG 2 cut(s) 2459, 3092
FbaI TGATCA 2 cut(s) 1062, 1104
FblI GTMKAC 5 cut(s) 1897, 2488, 2961, 3586, 3961
FriOI GRGCYC 3 cut(s) 1608, 1629, 2792
GlaI GCGC 1 cut(s) 1216
GsaI CCCAGC 1 cut(s) 597
GsuI CTGGAG 3 cut(s) 2802, 3455, 4257
HaeII RGCGCY 1 cut(s) 1218
HaeIII GGCC 6 cut(s) 334, 788, 1187, 1280, 3047, 3604
HapII CCGG 2 cut(s) 739, 2555
HhaI GCGC 1 cut(s) 1217
Hin6I GCGC 1 cut(s) 1215
HinP1I GCGC 1 cut(s) 1215
HincII GTYRAC 2 cut(s) 2455, 3962
HindII GTYRAC 2 cut(s) 2455, 3962
HindIII AAGCTT 3 cut(s) 1882, 1953, 2549
HpaI GTTAAC 1 cut(s) 2455
HpaII CCGG 2 cut(s) 739, 2555
HphI GGTGA 6 cut(s) 397, 542, 599, 1488, 2417, 3493
HpyCH4IV ACGT 4 cut(s) 53, 195, 1734, 3419
HpySE526I ACGT 4 cut(s) 53, 195, 1734, 3419
HspAI GCGC 1 cut(s) 1215
Kpn2I TCCGGA 2 cut(s) 738, 2554
KpnI GGTACC 1 cut(s) 99
Ksp22I TGATCA 2 cut(s) 1062, 1104
KspAI GTTAAC 1 cut(s) 2455
LguI GCTCTTC 1 cut(s) 3663
LmnI GCTCC 5 cut(s) 603, 1931, 2787, 2795, 3163
LweI GCATC 7 cut(s) 348, 580, 851, 2215, 3030, 3991, 4166
MaeII ACGT 4 cut(s) 53, 195, 1734, 3419
MaeIII GTNAC 7 cut(s) 286, 489, 581, 610, 1339, 2620, 4281
MfeI CAATTG 1 cut(s) 1694
MflI RGATCY 5 cut(s) 6, 357, 3531, 3907, 4337
MhlI GDGCHC 7 cut(s) 324, 1000, 1608, 1629, 2644, 2792, 2890
MlsI TGGCCA 2 cut(s) 1280, 3604
MluI ACGCGT 1 cut(s) 1015
MluNI TGGCCA 2 cut(s) 1280, 3604
MlyI GAGTC 8 cut(s) 982, 1345, 2572, 2860, 2900, 3078, 3723, 4262
MmeI TCCRAC 5 cut(s) 1755, 3034, 3124, 3592, 4080
Mox20I TGGCCA 2 cut(s) 1280, 3604
Mph1103I ATGCAT 2 cut(s) 1535, 1768
MroI TCCGGA 2 cut(s) 738, 2554
MroXI GAANNNNTTC 1 cut(s) 1296
MscI TGGCCA 2 cut(s) 1280, 3604
MslI CAYNNNNRTG 5 cut(s) 619, 1634, 3288, 3365, 4190
Msp20I TGGCCA 2 cut(s) 1280, 3604
MspA1I CMGCKG 1 cut(s) 1420
MspI CCGG 2 cut(s) 739, 2555
MspR9I CCNGG 7 cut(s) 1710, 2072, 2681, 3049, 3473, 3696, 4061
MunI CAATTG 1 cut(s) 1694
Mva1269I GAATGC 4 cut(s) 912, 1381, 3922, 4304
MvaI CCWGG 7 cut(s) 1710, 2072, 2681, 3049, 3473, 3696, 4061
MvnI CGCG 1 cut(s) 1017
NdeI CATATG 2 cut(s) 2459, 3092
NheI GCTAGC 1 cut(s) 452
NlaIV GGNNCC 7 cut(s) 97, 855, 3159, 3533, 3564, 3889, 3909
NmeAIII GCCGAG 1 cut(s) 1191
NmuCI GTSAC 2 cut(s) 286, 610
NsiI ATGCAT 2 cut(s) 1535, 1768
NspI RCATGY 3 cut(s) 1288, 1366, 1467
NspV TTCGAA 1 cut(s) 3151
PaeI GCATGC 1 cut(s) 1366
PaeR7I CTCGAG 2 cut(s) 551, 4330
PagI TCATGA 1 cut(s) 1737
PciSI GCTCTTC 1 cut(s) 3663
PctI GAATGC 4 cut(s) 912, 1381, 3922, 4304
PdmI GAANNNNTTC 1 cut(s) 1296
PflFI GACNNNGTC 1 cut(s) 2333
PflMI CCANNNNNTGG 3 cut(s) 415, 661, 1085
PleI GAGTC 8 cut(s) 981, 1345, 2571, 2859, 2900, 3078, 3722, 4262
PpsI GAGTC 8 cut(s) 981, 1345, 2571, 2859, 2900, 3078, 3722, 4262
PshBI ATTAAT 2 cut(s) 1098, 3797
Psp124BI GAGCTC 2 cut(s) 1629, 2792
Psp6I CCWGG 7 cut(s) 1708, 2070, 2679, 3047, 3471, 3694, 4059
PspFI CCCAGC 1 cut(s) 593
PspGI CCWGG 7 cut(s) 1708, 2070, 2679, 3047, 3471, 3694, 4059
PspN4I GGNNCC 7 cut(s) 97, 855, 3159, 3533, 3564, 3889, 3909
PspPI GGNCC 7 cut(s) 786, 854, 1076, 2068, 2588, 3313, 3563
PspXI VCTCGAGB 1 cut(s) 4330
PstNI CAGNNNCTG 3 cut(s) 1565, 2585, 2686
PsuI RGATCY 5 cut(s) 6, 357, 3531, 3907, 4337
PsyI GACNNNGTC 1 cut(s) 2333
PvuII CAGCTG 1 cut(s) 1420
RsaI GTAC 4 cut(s) 97, 1014, 1145, 4071
RsaNI GTAC 4 cut(s) 96, 1013, 1144, 4070
RseI CAYNNNNRTG 5 cut(s) 619, 1634, 3288, 3365, 4190
Rsr2I CGGWCCG 1 cut(s) 3313
RsrII CGGWCCG 1 cut(s) 3313
SacI GAGCTC 2 cut(s) 1629, 2792
SalI GTCGAC 1 cut(s) 3960
SapI GCTCTTC 1 cut(s) 3663
Sau96I GGNCC 7 cut(s) 786, 854, 1076, 2068, 2588, 3313, 3563
ScaI AGTACT 1 cut(s) 4071
SchI GAGTC 8 cut(s) 982, 1345, 2572, 2860, 2900, 3078, 3723, 4262
ScrFI CCNGG 7 cut(s) 1710, 2072, 2681, 3049, 3473, 3696, 4061
SduI GDGCHC 7 cut(s) 324, 1000, 1608, 1629, 2644, 2792, 2890
SfaNI GCATC 7 cut(s) 348, 580, 851, 2215, 3030, 3991, 4166
SfcI CTRYAG 4 cut(s) 2106, 2176, 2958, 4110
Sfr274I CTCGAG 2 cut(s) 551, 4330
SfuI TTCGAA 1 cut(s) 3151
SinI GGWCC 6 cut(s) 854, 1076, 2068, 2588, 3313, 3563
SlaI CTCGAG 2 cut(s) 551, 4330
SmiMI CAYNNNNRTG 5 cut(s) 619, 1634, 3288, 3365, 4190
SmlI CTYRAG 5 cut(s) 551, 3039, 3838, 4286, 4330
SmoI CTYRAG 5 cut(s) 551, 3039, 3838, 4286, 4330
SpeI ACTAGT 1 cut(s) 3568
SphI GCATGC 1 cut(s) 1366
SsiI CCGC 3 cut(s) 1857, 3229, 4128
SspI AATATT 1 cut(s) 3550
SstI GAGCTC 2 cut(s) 1629, 2792
StyD4I CCNGG 7 cut(s) 1708, 2070, 2679, 3047, 3471, 3694, 4059
StyI CCWWGG 4 cut(s) 1188, 2860, 3377, 3883
TaiI ACGT 4 cut(s) 56, 198, 1737, 3422
TaqII GACCGA 1 cut(s) 3301
TatI WGTACW 1 cut(s) 4069
TseFI GTSAC 2 cut(s) 286, 610
Tsp45I GTSAC 2 cut(s) 286, 610
TspGWI ACGGA 1 cut(s) 2960
Tth111I GACNNNGTC 1 cut(s) 2333
Van91I CCANNNNNTGG 3 cut(s) 415, 661, 1085
VpaK11BI GGWCC 6 cut(s) 854, 1076, 2068, 2588, 3313, 3563
VspI ATTAAT 2 cut(s) 1098, 3797
XagI CCTNNNNNAGG 1 cut(s) 2678
XbaI TCTAGA 1 cut(s) 2317
XceI RCATGY 3 cut(s) 1288, 1366, 1467
XcmI CCANNNNNNNNNTGG 3 cut(s) 1971, 2800, 3597
XhoI CTCGAG 2 cut(s) 551, 4330
XmiI GTMKAC 5 cut(s) 1897, 2488, 2961, 3586, 3961
XmnI GAANNNNTTC 1 cut(s) 1296
ZrmI AGTACT 1 cut(s) 4071
Zsp2I ATGCAT 2 cut(s) 1535, 1768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.