Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001408

Physical Location & Seq

Genomic Coordinates Forward (+)

55653171 .. 55656475

Gene Structure 3305 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40004

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGAATGAGGGTTTTTATAAGAACATTGTGGAATGTTGTGCTTTGAACCAGGATTTCAAGATGTGGCCTAACGGAGATTTGACAGTCGTGGGGGAAAGAGGAATAAATCTAAGTGGAGGCCAAAAACAAAGGATTCAACTCGCAAGAGCTGTCTACAGTGATGCTGATGTATATATCTTAGACGACCCTTTCAGTGCTGTAGATGCACATACAGGAACACATTTGTTCACGAAATGTATCTTGCAAGAATTGTCTGAAAAAACCGTAATCTATGCTACTCACCAACTAGAATTTTTGGAAGCAGCAGACTATGTTTTGATCCGAGAAGAAGAAGAAGAAGCACACACTGGTCGCTTAAAATGGAGTGTATATTCTACATTTGTGACTTGTGCTTTTAGAGGTCTACTGCTTCCAGTAATCCTTGTCTGTCACGTTCTCTTCCAAGTGCTCCAGATGGCAAGCAACTACTGGATTGCGTGGGCAGTAGGGAAGGAAAACACTGTCACCAGAGGAAACATGATATGGATTTTCGCTCTTTTATCTGGTGCAAGCTCTGTCTTCCTCTTGGGAAGGGCTGTTTTCCTTTCAGTTATCACTATTGAAACTTCCCAGCATCTCTTTGTTGGGATGATTACTTCAGTTTTCCGAGCGCCTATGGCATTTTTCGACTCTACACCTTCTAGTCGAATCCTCACTAGGAAATGGTTTCAGTCTTCCACAGATCAAAGCACAGTTCACACAGATATCACATTCAGGTTGGGGGGGCTAGTATTTGCACTCATTCAACTAGTATGCACTATAATCCTTATGTGTCTCGTGGCCTGGCAATTGTCCCTACTTTTCCTTGTCGTCGTTGCAATTTCCTTTTGGTACATGTACTATATTACCACTGCTAGAGAACTGGCCAGAATGGTTGCAACTCAGAAAGCTCCAATACTGCATCATTTTTCAGAATCAACTGTAGGAGCTACAACGATTCGTTGTTTCAATCAACAAAATCGATTCTTGACAAAAGCAATGAATGAAATTGATGACTTTTCTCGAGTAGCCTTTCATAACAATGCAACAATGGAATGGCTATCTGTGAGAATAAATTTTCTGTTCAATCTTGCCTTCCTTGTAGTTCTTATTGTCTTGGTGAACCAGCCTAAGTCTGCCATTGAACCTACTTTGGCAGGAGTGGCTGCATCATATGGTCTAAACGTTACTGTCCTGCAGGCTTGGGTGATTTGGAATCTATGCAATGTTGAAAACAAAATGATATCTGTTGAGAGAATTCTTCAATTCACTGGAATAGAAAGTGAGGCACCACTTGTGATCGAAGCTTCTAGGCAAAACTCCGAATGGCCAACTGAAGGACAAATTGAATTTCAAAACGTGCAAGTTCAATATCAGCCTGAGGGTCCAATGGTACTGAAAGGGATCACTTGCACATTCTCTAAAAAAGAGAAAATTGGAGTGGTGGGAAGAACAGGAAGTGGAAAGTCCACTATGATCCAAGCCTTGTTTAGAGTTGTTGAGCTCTCAGGAGGGAGAATTCTTATTGATGAACAAGGCATTTCTAAAATAGGCCTGCAGGATTTAAGGTCAAGTTTAGGCATAATCCCGCAAGACCCAACTTTATTTCAAGGAAGCTTGAGGAATAATCTGGATCCTCTGCAGCAACATTCTGATCAAGAAATATTGGAGGTTGTGAAGAAATGTCGACTTGGGAACCTAGTGAGGCAAGACCAAATGCTCCTGGATGCACCTGTTTCTGAAGATGGAGAAAACTGGAGCGTCGGACAGAGGCAGCTTATTTGTCTAGCCAGAGTGCTTCTGAAGAAGAGGAAAATACGAGTGCTAGATAAGGCTACTGCATCTATAGATACAGGAACAGATAATGCAATTCAGGAGACAATAAGAAAAGAAACGAGTGAATGCACAGTTATCACGGTGGCTCACCGGATTCCTACTGTTATGGACAGTGACATGGTTCTAGTTCTTGATGAAGGCAGAATTGTGGAGTACAATTCTCCTGCTCGGCTAATGAAGGATAACTCTTCCTCATTTTCAAAGTTGGTTGCGGAATTCTTGAGGCGATCTTCCAGGAGAAAGAACAATGGCTCATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0010290 GO:0015399 GO:0015405 GO:0015431 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071997 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04071 ko04976 ko04977 ko05206 map01523 map01524 map02010 map04071 map04976 map04977 map05206

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

704

Amino Acids

79.04

Weight (kDa)

6.66

Isoelectric Point (pI)

40.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	28 - 64	2.5e-07	ABC transporter
ABC_membrane	PF00664	141 - 378	5.6e-26	ABC transporter transmembrane region
ABC_tran	PF00005	472 - 620	7.4e-24	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001408)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g24630
malus_domestica	MD13G1109600.v1.1 MD13G1110900.v1.1 MD14G1118700.v1.1 MD16G1109500.v1.1
prunus_persica	Prupe.1G235800_v2.0.a1 Prupe.1G236100_v2.0.a1
pyrus_communis	pycom11g17660 pycom13g09660
rosa_chinensis	RchiOBHm_Chr2g0131921 RchiOBHm_Chr4g0431141 RchiOBHm_Chr4g0431381 RchiOBHm_Chr4g0431551 RchiOBHm_Chr4g0431711 RchiOBHm_Chr5g0037421 RchiOBHm_Chr6g0306331
rosa_laevigata	RLG00000006895 RLG00000010802
rosa_multiflora	Rmu_co8343513.1_g000001 Rmu_sc0002271.1_g000023 Rmu_sc0002521.1_g000013 Rmu_sc0003473.1_g000005 Rmu_sc0005185.1_g000002 Rmu_sc0005258.1_g000003 Rmu_sc0013042.1_g000001
rosa_roxburghii	Rroxscaffold_3G00259720 Rroxscaffold_5G00372860 Rroxscaffold_5G00372880 Rroxscaffold_5G00372890 Rroxscaffold_5G00372970 Rroxscaffold_5G00373130 Rroxscaffold_7G00161860 Rroxscaffold_7G00161870
rosa_rugosa	Rorug04G0248700 Rorug04G0250100.1 Rorug04G0251800 Rorug04G0251800 Rorug04G0251900 Rorug04G0252000 Rorug04G0252100
rosa_samantha	Rh4AG308400 Rh4BG312300 Rh4BG312400 Rh4BG313800 Rh4BG316200 Rh4CG328600 Rh4DG308800 Rh4DG311000
rosa_wichuraiana	Rw4G026510 Rw4G026750 Rw4G026820 Rw5G016080 Rw6G040190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	18
AccB1I	GGYRCC	1 cut(s)	1306
AccI	GTMKAC	3 cut(s)	153, 403, 1705
AciI	CCGC	2 cut(s)	1607, 2066
AclI	AACGTT	1 cut(s)	1203
AclWI	GGATC	5 cut(s)	313, 1430, 1489, 1646, 1659
AcoI	YGGCCR	2 cut(s)	903, 1346
AcsI	RAATTY	6 cut(s)	290, 1093, 1275, 1367, 1536, 2069
AcuI	CTGAAG	4 cut(s)	621, 1374, 1779, 1841
AfaI	GTAC	4 cut(s)	872, 878, 1413, 2009
AfiI	CCNNNNNNNGG	1 cut(s)	1355
AflIII	ACRYGT	1 cut(s)	873
AhlI	ACTAGT	1 cut(s)	787
AjnI	CCWGG	4 cut(s)	48, 821, 1740, 2087
AluBI	AGCT	8 cut(s)	149, 552, 929, 968, 1325, 1522, 1635, 1795
AluI	AGCT	8 cut(s)	149, 552, 929, 968, 1325, 1522, 1635, 1795
Alw21I	GWGCWC	2 cut(s)	450, 1524
Alw26I	GTCTC	2 cut(s)	818, 1889
AlwI	GGATC	5 cut(s)	313, 1430, 1489, 1646, 1659
Ama87I	CYCGRG	1 cut(s)	1041
AoxI	GGCC	6 cut(s)	65, 118, 819, 903, 1346, 1570
ApeKI	GCWGC	4 cut(s)	302, 1184, 1660, 1792
ApoI	RAATTY	6 cut(s)	290, 1093, 1275, 1367, 1536, 2069
AspLEI	GCGC	1 cut(s)	652
AspS9I	GGNCC	1 cut(s)	1403
AsuHPI	GGTGA	5 cut(s)	272, 496, 1150, 1237, 1934
AvaI	CYCGRG	1 cut(s)	1041
AvaII	GGWCC	1 cut(s)	1403
AxyI	CCTNAGG	1 cut(s)	1398
BalI	TGGCCA	2 cut(s)	905, 1348
BamHI	GGATCC	1 cut(s)	1651
BanI	GGYRCC	1 cut(s)	1306
BanII	GRGCYC	1 cut(s)	1524
BauI	CACGAG	1 cut(s)	815
BbsI	GAAGAC	2 cut(s)	550, 705
Bbv12I	GWGCWC	2 cut(s)	450, 1524
BbvI	GCAGC	4 cut(s)	314, 1171, 1672, 1804
BccI	CCATC	2 cut(s)	448, 1757
BciT130I	CCWGG	4 cut(s)	50, 823, 1742, 2089
BclI	TGATCA	1 cut(s)	1672
BcoDI	GTCTC	2 cut(s)	818, 1889
BcuI	ACTAGT	1 cut(s)	787
BfmI	CTRYAG	7 cut(s)	154, 198, 960, 1214, 1574, 1658, 1863
BfoI	RGCGCY	1 cut(s)	653
BisI	GCNGC	4 cut(s)	303, 1185, 1661, 1793
BlsI	GCNGC	4 cut(s)	304, 1186, 1662, 1794
Bme1390I	CCNGG	4 cut(s)	50, 823, 1742, 2089
Bme18I	GGWCC	1 cut(s)	1403
BmeT110I	CYCGRG	1 cut(s)	1041
BmgT120I	GGNCC	1 cut(s)	1403
BmiI	GGNNCC	4 cut(s)	1308, 1404, 1653, 1715
BmrFI	CCNGG	4 cut(s)	50, 823, 1742, 2089
BmsI	GCATC	7 cut(s)	151, 193, 622, 949, 1196, 1735, 1868
BpiI	GAAGAC	2 cut(s)	550, 705
BpmI	CTGGAG	2 cut(s)	434, 1795
BpuEI	CTTGAG	2 cut(s)	1657, 2095
Bsa29I	ATCGAT	1 cut(s)	1000
BsaWI	WCCGGW	1 cut(s)	1944
Bsc4I	CCNNNNNNNGG	1 cut(s)	1355
Bse1I	ACTGG	6 cut(s)	352, 413, 473, 906, 1294, 1778
Bse21I	CCTNAGG	1 cut(s)	1398
Bse3DI	GCAATG	2 cut(s)	1023, 1249
BseBI	CCWGG	4 cut(s)	50, 823, 1742, 2089
BseCI	ATCGAT	1 cut(s)	1000
BseGI	GGATG	2 cut(s)	633, 1750
BseLI	CCNNNNNNNGG	1 cut(s)	1355
BseMI	GCAATG	2 cut(s)	1023, 1249
BseMII	CTCAG	3 cut(s)	935, 1389, 1539
BseNI	ACTGG	6 cut(s)	352, 413, 473, 906, 1294, 1778
BseXI	GCAGC	4 cut(s)	314, 1171, 1672, 1804
BseYI	CCCAGC	1 cut(s)	609
BshFI	GGCC	6 cut(s)	67, 120, 821, 905, 1348, 1572
BshNI	GGYRCC	1 cut(s)	1306
BshVI	ATCGAT	1 cut(s)	1000
BsiHKAI	GWGCWC	2 cut(s)	450, 1524
BsiHKCI	CYCGRG	1 cut(s)	1041
BsiSI	CCGG	1 cut(s)	1945
BslFI	GGGAC	1 cut(s)	817
BslI	CCNNNNNNNGG	1 cut(s)	1355
BsmAI	GTCTC	2 cut(s)	818, 1889
BsmFI	GGGAC	1 cut(s)	817
BsmI	GAATGC	1 cut(s)	1925
BsnI	GGCC	6 cut(s)	67, 120, 821, 905, 1348, 1572
BsoBI	CYCGRG	1 cut(s)	1041
Bsp1286I	GDGCHC	2 cut(s)	450, 1524
Bsp143I	GATC	8 cut(s)	318, 721, 1317, 1422, 1494, 1651, 1672, 2081
BspACI	CCGC	2 cut(s)	1607, 2066
BspANI	GGCC	6 cut(s)	67, 120, 821, 905, 1348, 1572
BspCNI	CTCAG	3 cut(s)	934, 1390, 1538
BspDI	ATCGAT	1 cut(s)	1000
BspLI	GGNNCC	4 cut(s)	1308, 1404, 1653, 1715
BspMAI	CTGCAG	3 cut(s)	1218, 1578, 1662
BspPI	GGATC	5 cut(s)	313, 1430, 1489, 1646, 1659
BspT107I	GGYRCC	1 cut(s)	1306
BsrDI	GCAATG	2 cut(s)	1023, 1249
BsrI	ACTGG	6 cut(s)	352, 413, 473, 906, 1294, 1778
BssMI	GATC	8 cut(s)	318, 721, 1317, 1422, 1494, 1651, 1672, 2081
BssSI	CACGAG	1 cut(s)	815
Bst2BI	CACGAG	1 cut(s)	815
Bst2UI	CCWGG	4 cut(s)	50, 823, 1742, 2089
Bst6I	CTCTTC	3 cut(s)	443, 1820, 2047
BstC8I	GCNNGC	4 cut(s)	460, 550, 1218, 1574
BstDEI	CTNAG	6 cut(s)	110, 178, 921, 1149, 1398, 1525
BstF5I	GGATG	2 cut(s)	633, 1750
BstH2I	RGCGCY	1 cut(s)	653
BstHHI	GCGC	1 cut(s)	652
BstKTI	GATC	8 cut(s)	321, 724, 1320, 1425, 1497, 1654, 1675, 2084
BstMAI	GTCTC	2 cut(s)	818, 1889
BstMBI	GATC	8 cut(s)	318, 721, 1317, 1422, 1494, 1651, 1672, 2081
BstMWI	GCNNNNNNNGC	3 cut(s)	203, 656, 1181
BstNI	CCWGG	4 cut(s)	50, 823, 1742, 2089
BstNSI	RCATGY	1 cut(s)	877
BstSCI	CCNGG	4 cut(s)	48, 821, 1740, 2087
BstSFI	CTRYAG	7 cut(s)	154, 198, 960, 1214, 1574, 1658, 1863
BstV1I	GCAGC	4 cut(s)	314, 1171, 1672, 1804
BstV2I	GAAGAC	2 cut(s)	550, 705
BstX2I	RGATCY	1 cut(s)	1651
BstYI	RGATCY	1 cut(s)	1651
Bsu15I	ATCGAT	1 cut(s)	1000
Bsu36I	CCTNAGG	1 cut(s)	1398
BsuRI	GGCC	6 cut(s)	67, 120, 821, 905, 1348, 1572
BsuTUI	ATCGAT	1 cut(s)	1000
BtsCI	GGATG	2 cut(s)	633, 1750
BtsI	GCAGTG	1 cut(s)	888
BtsIMutI	CAGTG	7 cut(s)	163, 199, 345, 498, 888, 1287, 1972
Cac8I	GCNNGC	4 cut(s)	460, 550, 1218, 1574
CfoI	GCGC	1 cut(s)	652
Cfr13I	GGNCC	1 cut(s)	1403
ClaI	ATCGAT	1 cut(s)	1000
CseI	GACGC	1 cut(s)	1768
Csp6I	GTAC	4 cut(s)	871, 877, 1412, 2008
CviAII	CATG	3 cut(s)	517, 874, 1972
CviQI	GTAC	4 cut(s)	871, 877, 1412, 2008
DdeI	CTNAG	6 cut(s)	110, 178, 921, 1149, 1398, 1525
DpnI	GATC	8 cut(s)	320, 723, 1319, 1424, 1496, 1653, 1674, 2083
DpnII	GATC	8 cut(s)	318, 721, 1317, 1422, 1494, 1651, 1672, 2081
EaeI	YGGCCR	2 cut(s)	903, 1346
Eam1104I	CTCTTC	3 cut(s)	443, 1820, 2047
EarI	CTCTTC	3 cut(s)	443, 1820, 2047
Ecl136II	GAGCTC	1 cut(s)	1522
Eco147I	AGGCCT	1 cut(s)	1572
Eco24I	GRGCYC	1 cut(s)	1524
Eco32I	GATATC	2 cut(s)	745, 1263
Eco47I	GGWCC	1 cut(s)	1403
Eco53kI	GAGCTC	1 cut(s)	1522
Eco57I	CTGAAG	4 cut(s)	621, 1374, 1779, 1841
Eco81I	CCTNAGG	1 cut(s)	1398
Eco88I	CYCGRG	1 cut(s)	1041
EcoICRI	GAGCTC	1 cut(s)	1522
EcoRI	GAATTC	3 cut(s)	1275, 1536, 2069
EcoRII	CCWGG	4 cut(s)	48, 821, 1740, 2087
EcoRV	GATATC	2 cut(s)	745, 1263
EcoT38I	GRGCYC	1 cut(s)	1524
FaeI	CATG	3 cut(s)	520, 877, 1975
FaqI	GGGAC	1 cut(s)	817
FatI	CATG	3 cut(s)	516, 873, 1971
FauI	CCCGC	1 cut(s)	1614
FauNDI	CATATG	1 cut(s)	1192
FbaI	TGATCA	1 cut(s)	1672
FblI	GTMKAC	3 cut(s)	153, 403, 1705
Fnu4HI	GCNGC	4 cut(s)	303, 1185, 1661, 1793
FokI	GGATG	2 cut(s)	640, 1757
FriOI	GRGCYC	1 cut(s)	1524
Fsp4HI	GCNGC	4 cut(s)	303, 1185, 1661, 1793
GlaI	GCGC	1 cut(s)	651
GluI	GCNGC	4 cut(s)	303, 1185, 1661, 1793
GsaI	CCCAGC	1 cut(s)	613
GsuI	CTGGAG	2 cut(s)	434, 1795
HaeII	RGCGCY	1 cut(s)	653
HaeIII	GGCC	6 cut(s)	67, 120, 821, 905, 1348, 1572
HapII	CCGG	1 cut(s)	1945
HgaI	GACGC	1 cut(s)	1768
HhaI	GCGC	1 cut(s)	652
Hin1II	CATG	3 cut(s)	520, 877, 1975
Hin6I	GCGC	1 cut(s)	650
HinP1I	GCGC	1 cut(s)	650
HincII	GTYRAC	1 cut(s)	1706
HindII	GTYRAC	1 cut(s)	1706
HindIII	AAGCTT	2 cut(s)	1323, 1633
HinfI	GANTC	8 cut(s)	133, 668, 687, 953, 976, 1002, 1234, 1948
HpaII	CCGG	1 cut(s)	1945
HphI	GGTGA	5 cut(s)	272, 496, 1150, 1237, 1934
Hpy166II	GTNNAC	7 cut(s)	154, 228, 404, 736, 1141, 1488, 1706
Hpy8I	GTNNAC	7 cut(s)	154, 228, 404, 736, 1141, 1488, 1706
Hpy99I	CGWCG	2 cut(s)	854, 1784
HpyAV	CCTTC	7 cut(s)	484, 564, 687, 1123, 1349, 1985, 2026
HpyCH4IV	ACGT	3 cut(s)	432, 1203, 1377
HpyF10VI	GCNNNNNNNGC	3 cut(s)	203, 656, 1181
HpyF3I	CTNAG	6 cut(s)	110, 178, 921, 1149, 1398, 1525
HpySE526I	ACGT	3 cut(s)	432, 1203, 1377
Hsp92II	CATG	3 cut(s)	520, 877, 1975
HspAI	GCGC	1 cut(s)	650
Ksp22I	TGATCA	1 cut(s)	1672
Kzo9I	GATC	8 cut(s)	318, 721, 1317, 1422, 1494, 1651, 1672, 2081
LmnI	GCTCC	5 cut(s)	453, 934, 965, 1743, 1776
Lsp1109I	GCAGC	4 cut(s)	314, 1171, 1672, 1804
LweI	GCATC	7 cut(s)	151, 193, 622, 949, 1196, 1735, 1868
MaeII	ACGT	3 cut(s)	432, 1203, 1377
MaeIII	GTNAC	5 cut(s)	382, 428, 502, 1204, 1967
MalI	GATC	8 cut(s)	320, 723, 1319, 1424, 1496, 1653, 1674, 2083
MboI	GATC	8 cut(s)	318, 721, 1317, 1422, 1494, 1651, 1672, 2081
MfeI	CAATTG	1 cut(s)	827
MflI	RGATCY	1 cut(s)	1651
MhlI	GDGCHC	2 cut(s)	450, 1524
MlsI	TGGCCA	2 cut(s)	905, 1348
MluNI	TGGCCA	2 cut(s)	905, 1348
MlyI	GAGTC	1 cut(s)	662
MmeI	TCCRAC	1 cut(s)	1762
Mox20I	TGGCCA	2 cut(s)	905, 1348
MscI	TGGCCA	2 cut(s)	905, 1348
MseI	TTAA	2 cut(s)	356, 1583
MslI	CAYNNNNRTG	1 cut(s)	1059
Msp20I	TGGCCA	2 cut(s)	905, 1348
MspI	CCGG	1 cut(s)	1945
MspR9I	CCNGG	4 cut(s)	50, 823, 1742, 2089
MunI	CAATTG	1 cut(s)	827
Mva1269I	GAATGC	1 cut(s)	1925
MvaI	CCWGG	4 cut(s)	50, 823, 1742, 2089
MwoI	GCNNNNNNNGC	3 cut(s)	203, 656, 1181
NdeI	CATATG	1 cut(s)	1192
NdeII	GATC	8 cut(s)	318, 721, 1317, 1422, 1494, 1651, 1672, 2081
NlaIII	CATG	3 cut(s)	520, 877, 1975
NlaIV	GGNNCC	4 cut(s)	1308, 1404, 1653, 1715
NmeAIII	GCCGAG	1 cut(s)	2002
NmuCI	GTSAC	4 cut(s)	382, 428, 502, 1967
NspI	RCATGY	1 cut(s)	877
PaeR7I	CTCGAG	1 cut(s)	1041
PceI	AGGCCT	1 cut(s)	1572
PciI	ACATGT	1 cut(s)	873
PctI	GAATGC	1 cut(s)	1925
PfeI	GAWTC	7 cut(s)	133, 687, 953, 976, 1002, 1234, 1948
PfoI	TCCNGGA	2 cut(s)	1740, 2087
PkrI	GCNGC	4 cut(s)	304, 1186, 1662, 1794
PleI	GAGTC	1 cut(s)	662
PpsI	GAGTC	1 cut(s)	662
PscI	ACATGT	1 cut(s)	873
PsiI	TTATAA	1 cut(s)	18
Psp124BI	GAGCTC	1 cut(s)	1524
Psp1406I	AACGTT	1 cut(s)	1203
Psp6I	CCWGG	4 cut(s)	48, 821, 1740, 2087
PspFI	CCCAGC	1 cut(s)	609
PspGI	CCWGG	4 cut(s)	48, 821, 1740, 2087
PspN4I	GGNNCC	4 cut(s)	1308, 1404, 1653, 1715
PspPI	GGNCC	1 cut(s)	1403
PstI	CTGCAG	3 cut(s)	1218, 1578, 1662
PsuI	RGATCY	1 cut(s)	1651
RsaI	GTAC	4 cut(s)	872, 878, 1413, 2009
RsaNI	GTAC	4 cut(s)	871, 877, 1412, 2008
RseI	CAYNNNNRTG	1 cut(s)	1059
SacI	GAGCTC	1 cut(s)	1524
SalI	GTCGAC	1 cut(s)	1704
SaqAI	TTAA	2 cut(s)	356, 1583
SatI	GCNGC	4 cut(s)	303, 1185, 1661, 1793
Sau3AI	GATC	8 cut(s)	318, 721, 1317, 1422, 1494, 1651, 1672, 2081
Sau96I	GGNCC	1 cut(s)	1403
SbfI	CCTGCAGG	2 cut(s)	1218, 1578
SchI	GAGTC	1 cut(s)	662
ScrFI	CCNGG	4 cut(s)	50, 823, 1742, 2089
SdaI	CCTGCAGG	2 cut(s)	1218, 1578
SduI	GDGCHC	2 cut(s)	450, 1524
SfaNI	GCATC	7 cut(s)	151, 193, 622, 949, 1196, 1735, 1868
SfcI	CTRYAG	7 cut(s)	154, 198, 960, 1214, 1574, 1658, 1863
Sfr274I	CTCGAG	1 cut(s)	1041
SinI	GGWCC	1 cut(s)	1403
SlaI	CTCGAG	1 cut(s)	1041
SmiMI	CAYNNNNRTG	1 cut(s)	1059
SmlI	CTYRAG	3 cut(s)	1041, 1636, 2074
SmoI	CTYRAG	3 cut(s)	1041, 1636, 2074
SpeI	ACTAGT	1 cut(s)	787
Sse8387I	CCTGCAGG	2 cut(s)	1218, 1578
SseBI	AGGCCT	1 cut(s)	1572
SsiI	CCGC	2 cut(s)	1607, 2066
SspI	AATATT	1 cut(s)	1683
SstI	GAGCTC	1 cut(s)	1524
StuI	AGGCCT	1 cut(s)	1572
StyD4I	CCNGG	4 cut(s)	48, 821, 1740, 2087
TaiI	ACGT	3 cut(s)	435, 1206, 1380
TaqI	TCGA	6 cut(s)	666, 685, 1000, 1042, 1320, 1705
TatI	WGTACW	2 cut(s)	876, 2007
TfiI	GAWTC	7 cut(s)	133, 687, 953, 976, 1002, 1234, 1948
Tru1I	TTAA	2 cut(s)	356, 1583
Tru9I	TTAA	2 cut(s)	356, 1583
TscAI	CASTG	7 cut(s)	163, 199, 352, 505, 895, 1294, 1972
TseFI	GTSAC	4 cut(s)	382, 428, 502, 1967
TseI	GCWGC	4 cut(s)	302, 1184, 1660, 1792
Tsp45I	GTSAC	4 cut(s)	382, 428, 502, 1967
TspDTI	ATGAA	7 cut(s)	17, 1034, 1038, 1043, 1563, 2004, 2045
TspGWI	ACGGA	1 cut(s)	87
TspRI	CASTG	7 cut(s)	163, 199, 352, 505, 895, 1294, 1972
VpaK11BI	GGWCC	1 cut(s)	1403
XapI	RAATTY	6 cut(s)	290, 1093, 1275, 1367, 1536, 2069
XceI	RCATGY	1 cut(s)	877
XhoI	CTCGAG	1 cut(s)	1041
XmiI	GTMKAC	3 cut(s)	153, 403, 1705

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.