Rw4G026750

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
53006610 .. 53012687
6078 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G026750.1

Sequence Viewer

Length: 4287 bp
ATGGAGATCTCTCTGGAAATCGTCAATGTTGGGTTTTTCATAGTGTTATTGACGTGGGTTTTGCTAGATACACTGAGAAGAAGAAGAAGAAGAGATGGTACTGAAAATGAGACATATTTGAGAGACAGAGCAAGCAGAGGATGTAAAGGTTTTGCTTTGATAACCCTTATTGCAAATGCCTTAATTTCAGTGTTCTACGTTGTTTTTGGAATTTATGACTACTGCGGTGGTGGAAATGTAAGTTTGAAATCAATCTTTTCTGGGATGACTTGGGTTTTGGCAACAATAGTGACAATCTACTCCAAGAACACAGGTTTTAGTGAGCACAGAAGGTGGCCTTGGGTCCTCATTTTTTGGTGGATCTTCTCCTTCATTTTTTGCTCACTTTCAGTCTGCCTATACTTCATCACCCACTTCTTAAAATCTACAAAGTTGCCAGATATTCTTCCAAAGGCTAACATAGTCGAATTTGCTTCCTTACCTCTGTCAATGTTACTTTGTTGCAATGCTTTGAGTTATGTCCGGAAACACAGTGATCTTAAAGAACCATTACTCGAGAAGGAGTTCGAAATTCACACCGATAGTTACACTGATGCTGGGATTTGGAGCAAAGTCACATTCCGATGGCTAAATCCACTTTTCAAGAGGGGTCGAAACCAAAAGCTGGAATTACACCATATACCATCTGTCCCTCCTTCAGAAAGAGCAGCAAATGCTTCAGCTTTGCTCGAAGAATCTTTCCGGAAACAGAAGATGGAAGATTCTTCATTGCCAAAAGCCATAATTCGGGCCGTATGGAAATCATTAGCTGTAAATGCAGTTTTTGCAGGAGTTAATACTACTGCATCATATATGGGACCATTCCTAATCACAAACTTTGTGAACTATTTACTGGAAAAGCATGATGATTCAAGCATTCATCATGGATTGATTCTTGCATTTATATTCTTCATTGCGAAGACAATGGAATCACTGAGTCAAAGGCAGTGGTATTTTGGTGCTCAGATAATTGGTGTACGCGTTCGAGCAGCTCTCAGTGTGTTGATTTACAAAAATTCTATTTCGATCAAGTATTCTGGTCCAAGCAATGGGAAAATGATTAATTTGATCAATGTGGATGTAGAAAGAATTGGAGACTTCTGCTGGTACATTCATGGAATTTGGTTGCTTCCTCTTCAAGTCTTCTTGGCCTTGGTTATCCTTTACAGGAATCTCGGAGCTGCCCCCTCTGCAGCTGCTCTTATTGCCACGGTTTTGGTCATGGTTTGCAACACACCTTTGGCCAACATGCAAGAAAGGCTTCATTCCAAGATGATGGAGGCAAAGGATTCACGAATTAAAGTAACATCAGAGATTCTCAAAAGCATGCGAGTTTTGAAGCTGCATTCTTGGGAATCCACATTCTTGAAGAAGCTGCTTCAGCTGAGGGAAACAGAGAGGAGTTGGCTGAAGAGATACCTCTATACATGCTCAGTAGTGGCTTTTCTCTTCTGGGCTTCACCTACTCTGGTTTCAGTTGCCACTTTTGGTGTATGCATTATACTCAATACACCATTAAACACAGGAACTGTCTTGTCTGCTTTGGCTACTTTTAGAATTCTTCAAGAACCCATCTACAACCTCCCAGAGCTCATTTCCATGATTGCTCAAACAAAGGTATCAGTTGATCGTATCAAAGAATTCATCAAAGAAGATCAATTGAAGCTAATTCCTGGTCATACTTCAAAAGAATCCAACGTCATGATTGTAATTGAGACTGGAGAATATGCATGGAAAACAAGCGATCAGAACTTAAAGAAGCCTACAATCAAAATTGTGGAGAAGATAGAGATAATGAAAGGATACAAGGTAGCAATTTGCGGTTCTGTTGGTTCGGGCAAGTCAAGCTTACTAAGTAGTATACTTGGGGAGATTCCCAAAATTTCTGGGGTAGGAGCAAAGGTTTATGGGACAAAGCTTATGTTCCACAAAGGTTATTATGAGAATGTTTTGGAGGCTTGTGCTTTGGACCAGGATGTCAAAATGTGGGAAGATGGAGATTTGACTATAGTGGGGGAGAGAGGGATGAACCTAAGTGGGGGAGAAAAACAAAGGATTCAACTGGCAAGAGCAGTCTATAGTGGTTCCGATGTATACATCTTGGATGATCCTTTTAGTGCTGTTGATGCACATACAGGAACACACTTGTTCAAGAAATGTCTCTTGCAACACTTGTCTCTAAAGACTGTCGTCTATGCTACCCACCAATTAGAATTTCTAGAAGCAGCAGACCTTGTCTTGGTAATTAAAGGTGGTCAGATTGCTCAGTCTGGAAAATATGAAGATTTGATTGCCGACCTCAATGGTGAACTTGTCAGACAAATGGCTGCACATAGGAAATCGTTAGACCAAGTTAACAGATGCCAAATAGATGTTTCCTTAAAGATTAGACCTCATCAAGTTAATCTAATAGAGGTTGTGGAAGAGAAAGGGCCTTTCAACAATGGCAATCTTCCGGAAAAGAGTCACGAAGAAGAAGCAGAAACTGGTCCAGTGAAGTTGAGTGTTTATTCCACCTTTGTAACTTCTGCTTATGGAGGTGCTCTTGTCCCAGTTATCCTTCTCTGCCAAGTCCTCTTCCAGGGGCTGCAAATGGGCAGCAACTACTGGATGGCTTGGGGAACAGAGAAGGAGGGTAGGGTCAGTAGAGAGCGATTGATATGGGTATTTATTATGTTGTCTGGAGGGAGCTCCATCTTCATATTGGGGAGGGCAGTTTTTCTGGCAACTATTGCTATACAGACTGCTCAGAGTCTCTTCCTTAGAATGATAACTTCAGTATTCCGAGCACCCATCTCATTTTTCGACTCCACTCCTTCTAGCCGAATCCTGAATAGGTCTTCCACGGATCAAAGCACTGTAGACATGGACATTCCTTATAGATTAGCTGGATTAGCATTTGCACTGATCCAACTAACAAGCATCATAGTCCTTATGTCTCAAGTGGCTTGGCAAGTTTTCCTTCTTTTCCTCGGGGTTCTTGGACTCTCCATATGGTATCAAGCCTATTACATTACCACAGCTAGAGAACTTGCGAGGATGGTTGGAATTCGGAAGGCTCCAATCCTCCATCACTTCTCAGAATCAATCACAGGGGCAGCAACAATTCGTTGTTTCAACCAAGAAAACCGCTTCTTGATGAAGATAATGAACCTCATTGACGATTATTCTCGTGTAGCCTTTCACAATTATGCCACAATGGAATGGTTATCGGTCCGAATCAATTTTCTGTTCAACCTTGTATTCTTCCTTGTTCTTGTCATTTTAGTGAGCCTGCCAAGGTCTGCCATTAACCCTAGTTTGGCAGGACTGGCAGCTACCTATGGTTTGAACCTCAATGTTCTCCAGGCTTGGGTGATATGGAATTTGTGTAATGTGGAAAACAAAATGATATCAGTGGAGAGGATCCTTCAATTCACAAATATTCCAAGTGAGGCACCACTAGTCATTGAAGATTGTAGACCAAACCCTGAATGGCCAACAGTCGGAAAAATTGAACTTGAAAACCTTCATGTTCAGTATGATCCAGCTCTTCCAATGGTTCTCAAAGGGATCAGTTGCACCTTCCCTGGACAAAAGAAAATTGGAGTTGTGGGCAGGACGGGGAGTGGAAAATCTACCTTGATCCAAGCTCTTTTTAGAGTAGTAGAGCCCTCTGGTGGACATATACTAATAGATGGTGTTGATATTTCTAAAATAGGTCTGCAAGACTTGAGATCAAGGTTGGGAATAATTCCACAAGACCCAACATTATTTCAAGGAACCATGAGGACAAATCTGGATCCTCTGCAACAGCATTCAGATCAAGAAATCTGGGAGGTTCTCAATCAGTGTCGACTTGCAGAGATAGTTAGGCAAGACCAAAGGCTTCTTGATGCACCTGTTGCTGAAGATGGAGAAAATTTGAGTGTGGGACAGAGGCAGCTTGTGTGCCTGGCACGAGTACTCCTAAAGAAAAGAAGGATTCTGGTGTTGGATGAGGCTACAGCTTCTATTGATACCGCCACAGATGTTATAATTCAGGAGACTATAAGGAGAGAAACAAGTGGATGCACTGTCATTACTGTGGCTCATCGAATTCCTACTGTTATTGACAATGACTTGGTTCTAGTCCTTGATGAAGGAAAGGTTTTAGAGTATGACTCTCCAACTCGGTTACTTGAGGATAGTTCTTCTGCATTCTCCAAGTTGGTGGCAGAATACTCGAGGAGATCTTCCATGAGCGACTGCTTTAGAGACCTATCTTGA

Protein Analysis

1428

Amino Acids

160.42

Weight (kDa)

8.66

Isoelectric Point (pI)

36.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 272 - 537 5.2e-23 ABC transporter transmembrane region
ABC_tran PF00005 682 - 718 2.1e-06 ABC transporter
ABC_membrane PF00664 881 - 1105 2.1e-29 ABC transporter transmembrane region
ABC_tran PF00005 1195 - 1343 6e-30 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4055
AasI GACNNNNNNGTC 1 cut(s) 2015
AccB1I GGYRCC 1 cut(s) 3475
AccB7I CCANNNNNTGG 2 cut(s) 664, 1088
AccI GTMKAC 5 cut(s) 1900, 2133, 2901, 3499, 3874
AccII CGCG 1 cut(s) 1020
AccIII TCCGGA 3 cut(s) 522, 741, 2494
AciI CCGC 4 cut(s) 225, 1860, 3169, 4041
AcoI YGGCCR 2 cut(s) 1281, 3515
AcuI CTGAAG 6 cut(s) 681, 702, 1403, 1469, 2799, 3948
AfaI GTAC 4 cut(s) 100, 1017, 1148, 3984
AflIII ACRYGT 1 cut(s) 1018
AhlI ACTAGT 1 cut(s) 3481
AjiI CACGTC 1 cut(s) 54
AjnI CCWGG 6 cut(s) 1711, 2010, 2619, 3384, 3607, 3972
AjuI GAANNNNNNNTTGG 4 cut(s) 322, 354, 2238, 2270
Alw21I GWGCWC 6 cut(s) 327, 1003, 1632, 2584, 2732, 2830
AlwNI CAGNNNCTG 3 cut(s) 1568, 2525, 2626
Ama87I CYCGRG 3 cut(s) 554, 3011, 4243
Aor13HI TCCGGA 3 cut(s) 522, 741, 2494
AoxI GGCC 6 cut(s) 335, 789, 1188, 1281, 2471, 3515
ArsI GACNNNNNNTTYG 4 cut(s) 43, 75, 259, 291
AseI ATTAAT 1 cut(s) 1101
Asp700I GAANNNNTTC 3 cut(s) 563, 1299, 3546
AspS9I GGNCC 8 cut(s) 343, 789, 857, 1079, 2008, 2471, 2528, 3253
AsuHPI GGTGA 4 cut(s) 400, 1491, 2357, 3406
AsuII TTCGAA 1 cut(s) 567
AvaI CYCGRG 3 cut(s) 554, 3011, 4243
AvaII GGWCC 6 cut(s) 343, 857, 1079, 2008, 2528, 3253
BaeI ACNNNNGTAYC 2 cut(s) 1641, 1674
BalI TGGCCA 2 cut(s) 1283, 3517
BamHI GGATCC 2 cut(s) 3444, 3820
BanI GGYRCC 1 cut(s) 3475
BanII GRGCYC 3 cut(s) 1632, 2732, 3693
BarI GAAGNNNNNNTAC 2 cut(s) 82, 114
BauI CACGAG 2 cut(s) 3210, 3978
BbsI GAAGAC 3 cut(s) 965, 1174, 2871
Bbv12I GWGCWC 6 cut(s) 327, 1003, 1632, 2584, 2732, 2830
BbvCI CCTCAGC 1 cut(s) 1424
BceAI ACGGC 1 cut(s) 776
BcgI CGANNNNNNTGC 2 cut(s) 4224, 4258
BciT130I CCWGG 6 cut(s) 1713, 2012, 2621, 3386, 3609, 3974
BciVI GTATCC 1 cut(s) 1835
BclI TGATCA 1 cut(s) 1107
BcuI ACTAGT 1 cut(s) 3481
BfaI CTAG 7 cut(s) 65, 2258, 2859, 3063, 3336, 3482, 4148
BfmI CTRYAG 5 cut(s) 1230, 2046, 2116, 2898, 4023
BfuI GTATCC 1 cut(s) 1835
BglII AGATCT 2 cut(s) 6, 4250
BmcAI AGTACT 1 cut(s) 3984
Bme1390I CCNGG 6 cut(s) 1713, 2012, 2621, 3386, 3609, 3974
Bme18I GGWCC 6 cut(s) 343, 857, 1079, 2008, 2528, 3253
BmeT110I CYCGRG 3 cut(s) 554, 3011, 4243
BmgBI CACGTC 1 cut(s) 54
BmgT120I GGNCC 8 cut(s) 343, 789, 857, 1079, 2008, 2471, 2528, 3253
BmiI GGNNCC 8 cut(s) 344, 858, 2125, 3099, 3446, 3477, 3802, 3822
BmrFI CCNGG 6 cut(s) 1713, 2012, 2621, 3386, 3609, 3974
BmrI ACTGGG 1 cut(s) 2585
BmsI GCATC 7 cut(s) 583, 854, 2155, 2390, 2970, 3904, 4079
BmuI ACTGGG 1 cut(s) 2585
BoxI GACNNNNGTC 1 cut(s) 2228
BpiI GAAGAC 3 cut(s) 965, 1174, 2871
BplI GAGNNNNNCTC 4 cut(s) 1017, 1049, 4166, 4198
BpmI CTGGAG 3 cut(s) 1779, 2742, 3368
Bpu10I CCTNAGC 1 cut(s) 1424
Bpu14I TTCGAA 1 cut(s) 567
BpuEI CTTGAG 3 cut(s) 2964, 3772, 4220
BsaI GGTCTC 1 cut(s) 4269
BsaJI CCNNGG 8 cut(s) 338, 1191, 1248, 2620, 2883, 3010, 3317, 3607
BsaWI WCCGGW 3 cut(s) 522, 741, 2494
BsaXI ACNNNNNCTCC 4 cut(s) 1926, 1956, 3969, 3999
Bse1I ACTGG 8 cut(s) 897, 1762, 2106, 2530, 2531, 2591, 2651, 3354
Bse3DI GCAATG 4 cut(s) 511, 767, 951, 1093
BseAI TCCGGA 3 cut(s) 522, 741, 2494
BseBI CCWGG 6 cut(s) 1713, 2012, 2621, 3386, 3609, 3974
BseDI CCNNGG 8 cut(s) 338, 1191, 1248, 2620, 2883, 3010, 3317, 3607
BseMI GCAATG 4 cut(s) 511, 767, 951, 1093
BseMII CTCAG 9 cut(s) 65, 965, 1016, 1048, 1415, 1485, 2318, 2801, 3132
BseNI ACTGG 8 cut(s) 897, 1762, 2106, 2530, 2531, 2591, 2651, 3354
BseRI GAGGAG 2 cut(s) 1453, 4261
BseYI CCCAGC 1 cut(s) 596
BsgI GTGCAG 1 cut(s) 2352
Bsh1236I CGCG 1 cut(s) 1020
BshFI GGCC 6 cut(s) 337, 791, 1190, 1283, 2473, 3517
BshNI GGYRCC 1 cut(s) 3475
BsiHKAI GWGCWC 6 cut(s) 327, 1003, 1632, 2584, 2732, 2830
BsiHKCI CYCGRG 3 cut(s) 554, 3011, 4243
BsiSI CCGG 3 cut(s) 523, 742, 2495
BslFI GGGAC 5 cut(s) 674, 870, 1963, 2573, 3966
BsmFI GGGAC 5 cut(s) 674, 870, 1963, 2573, 3966
BsmI GAATGC 4 cut(s) 915, 1384, 3835, 4217
BsnI GGCC 6 cut(s) 337, 791, 1190, 1283, 2473, 3517
Bso31I GGTCTC 1 cut(s) 4269
BsoBI CYCGRG 3 cut(s) 554, 3011, 4243
Bsp119I TTCGAA 1 cut(s) 567
Bsp1286I GDGCHC 7 cut(s) 327, 1003, 1632, 2584, 2732, 2830, 3693
Bsp13I TCCGGA 3 cut(s) 522, 741, 2494
BspACI CCGC 4 cut(s) 225, 1860, 3169, 4041
BspANI GGCC 6 cut(s) 337, 791, 1190, 1283, 2473, 3517
BspCNI CTCAG 9 cut(s) 66, 966, 1015, 1047, 1416, 1484, 2317, 2800, 3131
BspEI TCCGGA 3 cut(s) 522, 741, 2494
BspFNI CGCG 1 cut(s) 1020
BspHI TCATGA 1 cut(s) 1740
BspLI GGNNCC 8 cut(s) 344, 858, 2125, 3099, 3446, 3477, 3802, 3822
BspMAI CTGCAG 1 cut(s) 1234
BspQI GCTCTTC 1 cut(s) 3576
BspT104I TTCGAA 1 cut(s) 567
BspT107I GGYRCC 1 cut(s) 3475
BspTNI GGTCTC 1 cut(s) 4269
BsrDI GCAATG 4 cut(s) 511, 767, 951, 1093
BsrI ACTGG 8 cut(s) 897, 1762, 2106, 2530, 2531, 2591, 2651, 3354
BssECI CCNNGG 8 cut(s) 338, 1191, 1248, 2620, 2883, 3010, 3317, 3607
BssNAI GTATAC 2 cut(s) 1901, 2134
BssSI CACGAG 2 cut(s) 3210, 3978
BssT1I CCWWGG 3 cut(s) 338, 1191, 3317
Bst1107I GTATAC 2 cut(s) 1901, 2134
Bst2BI CACGAG 2 cut(s) 3210, 3978
Bst2UI CCWGG 6 cut(s) 1713, 2012, 2621, 3386, 3609, 3974
Bst4CI ACNGT 9 cut(s) 533, 1252, 1570, 2227, 2899, 3523, 4096, 4105, 4126
Bst6I CTCTTC 8 cut(s) 85, 1179, 1445, 1493, 2457, 2621, 2801, 3576
BstAPI GCANNNNNTGC 4 cut(s) 713, 824, 2771, 3923
BstBI TTCGAA 1 cut(s) 567
BstC8I GCNNGC 3 cut(s) 133, 1367, 3314
BstDSI CCRYGG 2 cut(s) 1248, 2883
BstENI CCTNNNNNAGG 1 cut(s) 2618
BstFNI CGCG 1 cut(s) 1020
BstNI CCWGG 6 cut(s) 1713, 2012, 2621, 3386, 3609, 3974
BstNSI RCATGY 3 cut(s) 1291, 1369, 1470
BstPAI GACNNNNGTC 1 cut(s) 2228
BstSCI CCNGG 6 cut(s) 1711, 2010, 2619, 3384, 3607, 3972
BstSFI CTRYAG 5 cut(s) 1230, 2046, 2116, 2898, 4023
BstUI CGCG 1 cut(s) 1020
BstV2I GAAGAC 3 cut(s) 965, 1174, 2871
BstX2I RGATCY 5 cut(s) 6, 360, 3444, 3820, 4250
BstXI CCANNNNNNTGG 3 cut(s) 1255, 1315, 4231
BstYI RGATCY 5 cut(s) 6, 360, 3444, 3820, 4250
BstZ17I GTATAC 2 cut(s) 1901, 2134
BsuI GTATCC 1 cut(s) 1835
BsuRI GGCC 6 cut(s) 337, 791, 1190, 1283, 2473, 3517
BtgI CCRYGG 2 cut(s) 1248, 2883
BtrI CACGTC 1 cut(s) 54
BtsI GCAGTG 1 cut(s) 992
Cac8I GCNNGC 3 cut(s) 133, 1367, 3314
CaiI CAGNNNCTG 3 cut(s) 1568, 2525, 2626
CciI TCATGA 1 cut(s) 1740
Cfr13I GGNCC 8 cut(s) 343, 789, 857, 1079, 2008, 2471, 2528, 3253
CpoI CGGWCCG 1 cut(s) 3253
Csp6I GTAC 4 cut(s) 99, 1016, 1147, 3983
CspCI CAANNNNNGTGG 2 cut(s) 968, 1003
CspI CGGWCCG 1 cut(s) 3253
CviQI GTAC 4 cut(s) 99, 1016, 1147, 3983
DrdI GACNNNNNNGTC 1 cut(s) 2015
DseDI GACNNNNNNGTC 1 cut(s) 2015
EaeI YGGCCR 2 cut(s) 1281, 3515
Eam1104I CTCTTC 8 cut(s) 85, 1179, 1445, 1493, 2457, 2621, 2801, 3576
EarI CTCTTC 8 cut(s) 85, 1179, 1445, 1493, 2457, 2621, 2801, 3576
Ecl136II GAGCTC 2 cut(s) 1630, 2730
Eco130I CCWWGG 3 cut(s) 338, 1191, 3317
Eco24I GRGCYC 3 cut(s) 1632, 2732, 3693
Eco31I GGTCTC 1 cut(s) 4269
Eco32I GATATC 1 cut(s) 3432
Eco47I GGWCC 6 cut(s) 343, 857, 1079, 2008, 2528, 3253
Eco53kI GAGCTC 2 cut(s) 1630, 2730
Eco57I CTGAAG 6 cut(s) 681, 702, 1403, 1469, 2799, 3948
Eco88I CYCGRG 3 cut(s) 554, 3011, 4243
EcoICRI GAGCTC 2 cut(s) 1630, 2730
EcoNI CCTNNNNNAGG 1 cut(s) 2618
EcoO109I RGGNCCY 2 cut(s) 343, 2471
EcoRI GAATTC 4 cut(s) 1596, 1679, 3087, 4116
EcoRII CCWGG 6 cut(s) 1711, 2010, 2619, 3384, 3607, 3972
EcoRV GATATC 1 cut(s) 3432
EcoT14I CCWWGG 3 cut(s) 338, 1191, 3317
EcoT22I ATGCAT 2 cut(s) 1538, 1771
EcoT38I GRGCYC 3 cut(s) 1632, 2732, 3693
ErhI CCWWGG 3 cut(s) 338, 1191, 3317
FalI AAGNNNNNCTT 8 cut(s) 322, 354, 1284, 1316, 1871, 1903, 2985, 3017
FaqI GGGAC 5 cut(s) 674, 870, 1963, 2573, 3966
FauNDI CATATG 1 cut(s) 3032
FbaI TGATCA 1 cut(s) 1107
FblI GTMKAC 5 cut(s) 1900, 2133, 2901, 3499, 3874
FriOI GRGCYC 3 cut(s) 1632, 2732, 3693
FspBI CTAG 7 cut(s) 65, 2258, 2859, 3063, 3336, 3482, 4148
GsaI CCCAGC 1 cut(s) 600
GsuI CTGGAG 3 cut(s) 1779, 2742, 3368
HaeIII GGCC 6 cut(s) 337, 791, 1190, 1283, 2473, 3517
HapII CCGG 3 cut(s) 523, 742, 2495
HincII GTYRAC 2 cut(s) 2395, 3875
HindII GTYRAC 2 cut(s) 2395, 3875
HindIII AAGCTT 2 cut(s) 1885, 1955
HpaI GTTAAC 1 cut(s) 2395
HpaII CCGG 3 cut(s) 523, 742, 2495
HphI GGTGA 4 cut(s) 400, 1491, 2357, 3406
HpyCH4III ACNGT 9 cut(s) 533, 1252, 1570, 2227, 2899, 3523, 4096, 4105, 4126
HpyCH4IV ACGT 3 cut(s) 53, 198, 1737
HpySE526I ACGT 3 cut(s) 53, 198, 1737
Kpn2I TCCGGA 3 cut(s) 522, 741, 2494
Ksp22I TGATCA 1 cut(s) 1107
KspAI GTTAAC 1 cut(s) 2395
LguI GCTCTTC 1 cut(s) 3576
LmnI GCTCC 6 cut(s) 606, 1217, 1934, 2727, 2735, 3103
LweI GCATC 7 cut(s) 583, 854, 2155, 2390, 2970, 3904, 4079
MaeI CTAG 7 cut(s) 65, 2258, 2859, 3063, 3336, 3482, 4148
MaeII ACGT 3 cut(s) 53, 198, 1737
MaeIII GTNAC 8 cut(s) 289, 492, 584, 613, 1342, 2504, 2560, 4194
MfeI CAATTG 1 cut(s) 1697
MflI RGATCY 5 cut(s) 6, 360, 3444, 3820, 4250
MhlI GDGCHC 7 cut(s) 327, 1003, 1632, 2584, 2732, 2830, 3693
MlsI TGGCCA 2 cut(s) 1283, 3517
MluI ACGCGT 1 cut(s) 1018
MluNI TGGCCA 2 cut(s) 1283, 3517
MlyI GAGTC 6 cut(s) 985, 2512, 2800, 2840, 3018, 4175
MmeI TCCRAC 6 cut(s) 1758, 2974, 3064, 3505, 3993, 4211
Mox20I TGGCCA 2 cut(s) 1283, 3517
Mph1103I ATGCAT 2 cut(s) 1538, 1771
MroI TCCGGA 3 cut(s) 522, 741, 2494
MroXI GAANNNNTTC 3 cut(s) 563, 1299, 3546
MscI TGGCCA 2 cut(s) 1283, 3517
MslI CAYNNNNRTG 5 cut(s) 622, 1637, 3228, 3305, 4103
Msp20I TGGCCA 2 cut(s) 1283, 3517
MspA1I CMGCKG 2 cut(s) 1235, 1423
MspI CCGG 3 cut(s) 523, 742, 2495
MspR9I CCNGG 6 cut(s) 1713, 2012, 2621, 3386, 3609, 3974
MunI CAATTG 1 cut(s) 1697
Mva1269I GAATGC 4 cut(s) 915, 1384, 3835, 4217
MvaI CCWGG 6 cut(s) 1713, 2012, 2621, 3386, 3609, 3974
MvnI CGCG 1 cut(s) 1020
NdeI CATATG 1 cut(s) 3032
NlaIV GGNNCC 8 cut(s) 344, 858, 2125, 3099, 3446, 3477, 3802, 3822
NmuCI GTSAC 3 cut(s) 289, 613, 2504
NsiI ATGCAT 2 cut(s) 1538, 1771
NspI RCATGY 3 cut(s) 1291, 1369, 1470
NspV TTCGAA 1 cut(s) 567
PaeI GCATGC 1 cut(s) 1369
PaeR7I CTCGAG 2 cut(s) 554, 4243
PagI TCATGA 1 cut(s) 1740
PciSI GCTCTTC 1 cut(s) 3576
PctI GAATGC 4 cut(s) 915, 1384, 3835, 4217
PdmI GAANNNNTTC 3 cut(s) 563, 1299, 3546
PflFI GACNNNGTC 1 cut(s) 2273
PflMI CCANNNNNTGG 2 cut(s) 664, 1088
PleI GAGTC 6 cut(s) 984, 2511, 2799, 2840, 3018, 4175
PpsI GAGTC 6 cut(s) 984, 2511, 2799, 2840, 3018, 4175
PpuMI RGGWCCY 1 cut(s) 343
PshAI GACNNNNGTC 1 cut(s) 2228
PshBI ATTAAT 1 cut(s) 1101
PsiI TTATAA 1 cut(s) 4055
Psp124BI GAGCTC 2 cut(s) 1632, 2732
Psp5II RGGWCCY 1 cut(s) 343
Psp6I CCWGG 6 cut(s) 1711, 2010, 2619, 3384, 3607, 3972
PspFI CCCAGC 1 cut(s) 596
PspGI CCWGG 6 cut(s) 1711, 2010, 2619, 3384, 3607, 3972
PspN4I GGNNCC 8 cut(s) 344, 858, 2125, 3099, 3446, 3477, 3802, 3822
PspPI GGNCC 8 cut(s) 343, 789, 857, 1079, 2008, 2471, 2528, 3253
PspPPI RGGWCCY 1 cut(s) 343
PspXI VCTCGAGB 1 cut(s) 4243
PstI CTGCAG 1 cut(s) 1234
PstNI CAGNNNCTG 3 cut(s) 1568, 2525, 2626
PsuI RGATCY 5 cut(s) 6, 360, 3444, 3820, 4250
PsyI GACNNNGTC 1 cut(s) 2273
PvuII CAGCTG 2 cut(s) 1235, 1423
RsaI GTAC 4 cut(s) 100, 1017, 1148, 3984
RsaNI GTAC 4 cut(s) 99, 1016, 1147, 3983
RseI CAYNNNNRTG 5 cut(s) 622, 1637, 3228, 3305, 4103
Rsr2I CGGWCCG 1 cut(s) 3253
RsrII CGGWCCG 1 cut(s) 3253
SacI GAGCTC 2 cut(s) 1632, 2732
SalI GTCGAC 1 cut(s) 3873
SapI GCTCTTC 1 cut(s) 3576
Sau96I GGNCC 8 cut(s) 343, 789, 857, 1079, 2008, 2471, 2528, 3253
ScaI AGTACT 1 cut(s) 3984
SchI GAGTC 6 cut(s) 985, 2512, 2800, 2840, 3018, 4175
ScrFI CCNGG 6 cut(s) 1713, 2012, 2621, 3386, 3609, 3974
SduI GDGCHC 7 cut(s) 327, 1003, 1632, 2584, 2732, 2830, 3693
SfaNI GCATC 7 cut(s) 583, 854, 2155, 2390, 2970, 3904, 4079
SfcI CTRYAG 5 cut(s) 1230, 2046, 2116, 2898, 4023
Sfr274I CTCGAG 2 cut(s) 554, 4243
SfuI TTCGAA 1 cut(s) 567
SinI GGWCC 6 cut(s) 343, 857, 1079, 2008, 2528, 3253
SlaI CTCGAG 2 cut(s) 554, 4243
SmiMI CAYNNNNRTG 5 cut(s) 622, 1637, 3228, 3305, 4103
SmlI CTYRAG 5 cut(s) 554, 2979, 3751, 4199, 4243
SmoI CTYRAG 5 cut(s) 554, 2979, 3751, 4199, 4243
SpeI ACTAGT 1 cut(s) 3481
SphI GCATGC 1 cut(s) 1369
SsiI CCGC 4 cut(s) 225, 1860, 3169, 4041
SspI AATATT 1 cut(s) 3463
SspMI CTAG 7 cut(s) 65, 2258, 2859, 3063, 3336, 3482, 4148
SstI GAGCTC 2 cut(s) 1632, 2732
StyD4I CCNGG 6 cut(s) 1711, 2010, 2619, 3384, 3607, 3972
StyI CCWWGG 3 cut(s) 338, 1191, 3317
TaaI ACNGT 9 cut(s) 533, 1252, 1570, 2227, 2899, 3523, 4096, 4105, 4126
TaiI ACGT 3 cut(s) 56, 201, 1740
TaqII GACCGA 1 cut(s) 3241
TatI WGTACW 1 cut(s) 3982
TseFI GTSAC 3 cut(s) 289, 613, 2504
Tsp45I GTSAC 3 cut(s) 289, 613, 2504
TspGWI ACGGA 1 cut(s) 2900
Tth111I GACNNNGTC 1 cut(s) 2273
Van91I CCANNNNNTGG 2 cut(s) 664, 1088
VpaK11BI GGWCC 6 cut(s) 343, 857, 1079, 2008, 2528, 3253
VspI ATTAAT 1 cut(s) 1101
XagI CCTNNNNNAGG 1 cut(s) 2618
XbaI TCTAGA 1 cut(s) 2257
XceI RCATGY 3 cut(s) 1291, 1369, 1470
XcmI CCANNNNNNNNNTGG 2 cut(s) 2740, 3510
XhoI CTCGAG 2 cut(s) 554, 4243
XmiI GTMKAC 5 cut(s) 1900, 2133, 2901, 3499, 3874
XmnI GAANNNNTTC 3 cut(s) 563, 1299, 3546
XspI CTAG 7 cut(s) 65, 2258, 2859, 3063, 3336, 3482, 4148
ZrmI AGTACT 1 cut(s) 3984
Zsp2I ATGCAT 2 cut(s) 1538, 1771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.