RchiOBHm_Chr4g0431551

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
55756686 .. 55762328
5643 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ40019

Sequence Viewer

Length: 4425 bp
ATGGAGATCTCTCTGGAAATTGTCAATGTTGTGTTTTTCATAGTGTTATTGACGTGGGTTTTCCTAGATACACTGAGAAGAAGAAGAAGAGATGGTACTGAAAATGAGACATATTCGACAGACACAGCAAGCAGAGGATGTAAGCGGTTTGCTTTGATAACCCTTATTGCAAATGCCTTAATCTCAGTCTTCTATGTTGTTTTTGGAATTTATGACTATTGCGGTGGTGGAAACGTAAGTTTGAAATCAATCTTTTCTGGAATGACTTGGGTTTTGGCAACAATAGTGACAATCTACTCCAAGAACAGAGGTTTTATTGAGCACAAAAGGTGGCCTTGGGTCCTTATTTTTTGGTGGATCTTTTCCTTCATTTTTTGCTCACTTTCTGTGTGCCTTCACTTGATCAGCCACTACTTCAAATCCACAAAGTTTCCAGATTTTGTTCTAAAGGCAAACATAGTTGAATTCGCTTCCCTTCCCCTGTCGATGTTGCTTTGTTGCAATGTTTTGAGTTATGTCCAGAAAGACAGTGATCTCAATGAACCGTTACTCGAGGAGGAGTATGAAATTCAAACTGATAGTTACACTACTGCTGGAATATGGAGCAAAATAACATTCCAGTGGATGAATCCAATTTTTAAAATGGGACTTCACATCCAAAAACTGGAAGTGTCTCATATACCATCTATTCCTCCTTCAGCAAGAGCCGAGAGTGCTTCTTCTTTGCTCCAAGAATCACTCGAACACCACTCTTCATTATTAGAAGCCATACTGAGGGCTGTATGGAAATCACTAGCCATAAATGCAGTTTTTGCAGCTGTCAATGTTGTTGCATCCTATACTGGTCCCTTCATAATCAGAAACTTTATGAAGTACATAGTTGGAAAGGATGACAGCTCAAACATGTATGGAGAGAAGCTTGCCTTCGTATTCTTTTTTGCAATGACTTTGGACTCAATTACTCAAAGGCAAATGTCTTTTGGTGCTCGGCAAATTGGTCTACAAGTCAGAGCAGCTCTGGCCACCTTAATCTACAAGAAGTGCATCTCGATTAAGTACTCTGGTCCAAGCAATGGTGAAATCATAAACTTAATCAACATGGACGTAGAAGTGGTCGGAGAATTCTTCTCTTCTATTCATGGAGCTTGGGTGCTTCCCCTTCAAGTGTTGTTGGCATTGGTTATCTTGTACAGAAATCTCGGTGTTGCCCCTTCTCTGGCTGCCTTTCTGGCCACAGTAGCAGTAGTGGTATGCAACACACCATTGGCTCGAAGGCAACAAATTCTCCAATCAAAAATCATGGAAGCAAAGGATTCAAGAATCAAGAGAACCTCAGAGACTCTAAAGAGCATGAGAGTCATAAAATTCAATTCATGGGATCCTAGTTTCTTAGAGAAGCTACTTCAACTCAGAGAAACTGAGAAAAGTTGGTTAAGGAGATTTTTGTACACTAAGGCGGCAGTGGTATTTCTCTTCTGGACTTCACCAACCATAGTTTCAGTGGTTACTTTTGGTGTATGCATCATGATGAAAACACCATTAGAACCATATACAGTCCTGTCAGCTTTAGCTACTTTCAGAATCCTTACCGAGCCAATTTACAACCTTCCAGAGTTTATCTCAACGATTATCCAAACAAAGGTTTCAGTTAAGCGAATTCAAGAATTCATCAGATTAGATAAACAAGTGGTGCTGATTCCTTGTGATTATTCTTGCACTACATCATCTACTTCAGAAATCAGGGTTGAAATGGAGTCTGGAGAGTTTTCTTGGAACGCTAGCAATGAACATGTAGAGAGACCTACAATCACAGTTAGAGAGAAAATAACTATGAGAAAGGGATGCAAGGTGGGAGTTTGCGGTTCTGTTGGCTCAGGCAAGTCTAGCCTACTATGCAGTATACTTGGTGAGATTCCAAAAATTTCTGGGCAAGCAACCAAGTGTTATGGAACAAAATCTTACGTCCCACAAAGTCCATGGATCCAAACTGGAACCATAAGGGACAACATCTTGTTTGGTAAGGAGATGAACGAGGGTTTCTATAAGAACATTGTGGAATGTTGTGCCATGGACCAGGATTTCAAGATGTGGCCTAACGGAGATTTGACAGTCGTGGGGGAAAGAGGATTAAATCTAAGTGGAGGCCAAAAACAAAGGATTCAACTCGCAAGAGCTGTCTACAATGATGCTGATATATATGTCTTGGACGACCCTTTCAGTGCTGTAGATGCACATACTGGAACACATTTGTTCACGAAATGTATCTTGCAAGAATTGTCTGAAAAAACCGTAATCTATGCTACTCACCAACTAGAGTTTTTGGAAGCAGCAGACTATGTTTTGTCTAGCTCTCAATCTCTTAGCTCTCGTACATTACCAATTAATTTTGATGATATTCAGGTAGTTAAAGATGGTCAAATTGCTCAAGCCGGCACTTATGAGAAGTTGATTAAAGATCCTAATGGTGAACTTGTCAGACAAATGACTGCACATAGAAAATCTCTACACCAAGTTCACAGCAGTCGACCTGATTCTTTAAGCAACACCACAACTACTGGCCTCGTGGATAATGGAATTACTGAAAGAGTATTGGATATTGAAGAAATGGAACAAGCTTCAACCAATGACCAGATTACTGTCAAAGATATCCGAGGGGAAGAAGAAGAAACACACAATGGTCGGGTAAAATGGAGTGTATATTCTACATTTGTGACTTGTGCTTTTGGAGGTCTACTGCTTCCAGTGATCCTTCTCTGTCACGTCCTCTTCCAAGTGCTCCAGATGGCAAGCAACTACTGGATTGCTTGGGCAGCAGGGAAGGAAAACACTGTCACCAGAGGAAACATGTTGTGGATTTTCGCTCTTTTATCTGGTGGAAGCTCTGTCTTCATCTTGGGAAGGGCGGTCTTCCTTTCAGTTATTACTATTGAAACTTCCCAGAATCTCTTTGTTGGGATGATTACTTCAGTTTTCCGAGCGCCTATGGCATTTTTCGACTCTACACCTTCTAGTCGAATCCTCACTAGGTCTTCCACAGATCAAAGCACAGTCGACACAGATATTACATTCAGGTTAGCGGGGCTGGTATTTGCACTCATTCAACTACTATGCACTATCATCCTTATGTGTCTCGTGGCCTGGCAAGTCGTCATACTTTTCCTGGTCGTCATTGCAATTTCCTTTTGGTACATGAAGTACTATATTACCACTGCTAGAGAACTGGCCAGAATGGTTGCAACTCAAAAGGCTCCAATACTGCATCATTTTTCAGAATCAATTGTGGGAGCTACAACGATTCGTTGTTTCAATCAACAAAATCGCTTCTTGACAAAATCAATGAATGAAATTGATGACTTTTCTCGAGTAGCCTTTCATAACAATGCAACAATGGAATGGCTATCCGTGAGAATAAATTTTCTCTTCAATGTTGCCTTCCTTGTAGTGCTTATTGTCTTGGTAAACCTGCCTAAGTCTGTCATTGACCCTAGAGTGGCTGCATCATATGGTCTAAACCTTAGTGTCCTGCAGGCTTGGGTGATTTGGAATCTGTGCAATGTTGAAAACAAAATGATATCTGTTGAGAGAATTCTTCAATTCACTGGATTACAAAGTGAGGCGCCACTTGTGATCGAAGCTTCTAGGCCAAACTCTGAATGGCCATATGAAGGACAAATTGAATTTCAAAACGTGCAATTTCAATATCAGCCTGAGGGTCCAATGGTACTGAAAGGGATCACTTGCACATTCTCTAAAAGGATGAAAATTGGAGTGGTGGGAAGAACAGGAAGTGGAAAGTCCACTATGATCCAAGCCTTGTTTAGACTTGTTGAGCTCTCAGGAGGGAAAATTCTCATTGATGAACAAGACATTTCTAAAATAGGCCTGCAGGATTTAAGGTCAAGTTTAGGCATTATCCCACAGGACCCAACTTTATTTCAAGGAAGCTTGAGGAATAATCTGGATCCTCTGCAGCAACATTCTGATCCAGAAATACTGGAGGTTGTGAAGAAATGTCGACTTGGGAACTTAGTGAGGCAAGACCAAATGCTCCTGGATGCACCTGTTTCTGAGGATGGAGAAAACTGGAGCGTCGGACAGAGGCAGCTTGTCTGTCTAGCCAGAGTGCTTCTAAACAAGAGGAAAATTCTAGTGCTAGATGAGGCTACTGCATCTGTAGATACAGCAACAGATAATGCAATTCAAGAGACAATAAGGAAAGAGACAAGCGAATGCACAGTTATCACCGTGGCTCACCGGATTCCTACTGTTATGGACAGTGACATGGTTCTAGTTCTTGATGGAGGTAGGATATTGGAGTATGAATCTCCTGCTCGGCTGATTAAGGAAAACTCGTCTGCATTTTCGAAGTTAGTTGCGGAATTCTTGAGGAGATCTTCCATAAGAATGAACAACTGCTCATCCTGA

Protein Analysis

1474

Amino Acids

165.66

Weight (kDa)

7.65

Isoelectric Point (pI)

40.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 266 - 532 5.9e-21 ABC transporter transmembrane region
ABC_tran PF00005 609 - 739 8.8e-15 ABC transporter
ABC_membrane PF00664 917 - 1153 2.4e-29 ABC transporter transmembrane region
ABC_tran PF00005 1242 - 1390 1.5e-25 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 3471
AccB1I GGYRCC 1 cut(s) 3616
AccB7I CCANNNNNTGG 2 cut(s) 664, 1073
AccI GTMKAC 7 cut(s) 1000, 1900, 2178, 2524, 2731, 3051, 4015
AciI CCGC 7 cut(s) 145, 222, 1457, 1860, 2903, 3077, 4376
AcoI YGGCCR 4 cut(s) 1020, 1230, 3222, 3656
AcuI CTGAAG 3 cut(s) 681, 1716, 2949
AcyI GRCGYC 1 cut(s) 3617
AfaI GTAC 9 cut(s) 97, 875, 1058, 1190, 1448, 2371, 3188, 3197, 3723
AfiI CCNNNNNNNGG 7 cut(s) 664, 774, 1073, 1216, 1639, 3490, 3665
AflIII ACRYGT 3 cut(s) 903, 1789, 2844
AjiI CACGTC 2 cut(s) 54, 2761
AjnI CCWGG 4 cut(s) 2073, 3137, 3159, 4050
AjuI GAANNNNNNNTTGG 2 cut(s) 1480, 1512
Alw21I GWGCWC 4 cut(s) 324, 988, 2778, 3834
Alw26I GTCTC 7 cut(s) 101, 678, 1331, 1792, 3134, 4199, 4214
Ama87I CYCGRG 2 cut(s) 551, 3360
ApeKI GCWGC 8 cut(s) 815, 1013, 1220, 2327, 2810, 3494, 3970, 4102
ArsI GACNNNNNNTTYG 2 cut(s) 256, 288
AseI ATTAAT 1 cut(s) 2382
AspLEI GCGC 2 cut(s) 2980, 3619
AspS9I GGNCC 6 cut(s) 340, 845, 1064, 2071, 3713, 3922
AsuHPI GGTGA 9 cut(s) 1088, 1476, 1919, 2297, 2477, 2824, 3547, 4234, 4244
AsuII TTCGAA 1 cut(s) 4364
AsuNHI GCTAGC 1 cut(s) 1778
AvaI CYCGRG 2 cut(s) 551, 3360
AvaII GGWCC 6 cut(s) 340, 845, 1064, 2071, 3713, 3922
AxyI CCTNAGG 1 cut(s) 3708
BalI TGGCCA 4 cut(s) 1022, 1232, 3224, 3658
BamHI GGATCC 3 cut(s) 1378, 1980, 3961
BanI GGYRCC 1 cut(s) 3616
BanII GRGCYC 1 cut(s) 3834
BarI GAAGNNNNNNTAC 2 cut(s) 79, 111
BauI CACGAG 2 cut(s) 2561, 3131
BbsI GAAGAC 4 cut(s) 181, 2878, 2899, 3021
Bbv12I GWGCWC 4 cut(s) 324, 988, 2778, 3834
BbvI GCAGC 8 cut(s) 827, 1025, 1207, 2339, 2822, 3481, 3982, 4114
BccI CCATC 6 cut(s) 86, 691, 2405, 2776, 4067, 4292
BciT130I CCWGG 4 cut(s) 2075, 3139, 3161, 4052
BclI TGATCA 1 cut(s) 402
BcoDI GTCTC 7 cut(s) 101, 678, 1331, 1792, 3134, 4199, 4214
BfmI CTRYAG 5 cut(s) 2223, 3524, 3884, 3968, 4173
BfoI RGCGCY 2 cut(s) 2981, 3620
BfuAI ACCTGC 1 cut(s) 3471
BglI GCCNNNNNGGC 1 cut(s) 1229
BglII AGATCT 2 cut(s) 6, 4391
BisI GCNGC 9 cut(s) 816, 1014, 1221, 1458, 2328, 2811, 3495, 3971, 4103
BlsI GCNGC 9 cut(s) 817, 1015, 1222, 1459, 2329, 2812, 3496, 3972, 4104
BmcAI AGTACT 2 cut(s) 1058, 3197
Bme1390I CCNGG 4 cut(s) 2075, 3139, 3161, 4052
Bme18I GGWCC 6 cut(s) 340, 845, 1064, 2071, 3713, 3922
BmeT110I CYCGRG 2 cut(s) 551, 3360
BmgBI CACGTC 2 cut(s) 54, 2761
BmgT120I GGNCC 6 cut(s) 340, 845, 1064, 2071, 3713, 3922
BmrFI CCNGG 4 cut(s) 2075, 3139, 3161, 4052
BmtI GCTAGC 1 cut(s) 1782
BpiI GAAGAC 4 cut(s) 181, 2878, 2899, 3021
BplI GAGNNNNNCTC 2 cut(s) 1604, 1636
BpmI CTGGAG 4 cut(s) 1779, 2762, 4016, 4105
Bpu10I CCTNAGC 1 cut(s) 1873
Bpu14I TTCGAA 1 cut(s) 4364
BpuEI CTTGAG 3 cut(s) 2409, 3967, 4405
BsaHI GRCGYC 1 cut(s) 3617
BsaI GGTCTC 1 cut(s) 1792
BsaJI CCNNGG 5 cut(s) 335, 1976, 2067, 2650, 4245
BsaWI WCCGGW 1 cut(s) 4254
BsaXI ACNNNNNCTCC 4 cut(s) 1134, 1164, 1269, 1299
Bsc4I CCNNNNNNNGG 7 cut(s) 664, 774, 1073, 1216, 1639, 3490, 3665
Bse118I RCCGGY 1 cut(s) 2429
Bse21I CCTNAGG 1 cut(s) 3708
Bse3DI GCAATG 6 cut(s) 508, 948, 1078, 1789, 3168, 3559
BseBI CCWGG 4 cut(s) 2075, 3139, 3161, 4052
BseDI CCNNGG 5 cut(s) 335, 1976, 2067, 2650, 4245
BseLI CCNNNNNNNGG 7 cut(s) 664, 774, 1073, 1216, 1639, 3490, 3665
BseMI GCAATG 6 cut(s) 508, 948, 1078, 1789, 3168, 3559
BseRI GAGGAG 3 cut(s) 569, 572, 4402
BseXI GCAGC 8 cut(s) 827, 1025, 1207, 2339, 2822, 3481, 3982, 4114
BsgI GTGCAG 1 cut(s) 2472
BshNI GGYRCC 1 cut(s) 3616
BsiHKAI GWGCWC 4 cut(s) 324, 988, 2778, 3834
BsiHKCI CYCGRG 2 cut(s) 551, 3360
BsiSI CCGG 2 cut(s) 2430, 4255
BslFI GGGAC 4 cut(s) 660, 831, 1949, 2015
BslI CCNNNNNNNGG 7 cut(s) 664, 774, 1073, 1216, 1639, 3490, 3665
BsmAI GTCTC 7 cut(s) 101, 678, 1331, 1792, 3134, 4199, 4214
BsmFI GGGAC 4 cut(s) 660, 831, 1949, 2015
BsmI GAATGC 1 cut(s) 4235
Bso31I GGTCTC 1 cut(s) 1792
BsoBI CYCGRG 2 cut(s) 551, 3360
Bsp119I TTCGAA 1 cut(s) 4364
Bsp1286I GDGCHC 4 cut(s) 324, 988, 2778, 3834
Bsp1407I TGTACA 2 cut(s) 1188, 1446
Bsp19I CCATGG 2 cut(s) 1976, 2067
BspACI CCGC 7 cut(s) 145, 222, 1457, 1860, 2903, 3077, 4376
BspHI TCATGA 1 cut(s) 1524
BspMAI CTGCAG 3 cut(s) 3528, 3888, 3972
BspMI ACCTGC 1 cut(s) 3471
BspOI GCTAGC 1 cut(s) 1782
BspT104I TTCGAA 1 cut(s) 4364
BspT107I GGYRCC 1 cut(s) 3616
BspTNI GGTCTC 1 cut(s) 1792
BsrDI GCAATG 6 cut(s) 508, 948, 1078, 1789, 3168, 3559
BsrFI RCCGGY 1 cut(s) 2429
BsrGI TGTACA 2 cut(s) 1188, 1446
BssAI RCCGGY 1 cut(s) 2429
BssECI CCNNGG 5 cut(s) 335, 1976, 2067, 2650, 4245
BssNAI GTATAC 1 cut(s) 1901
BssNI GRCGYC 1 cut(s) 3617
BssSI CACGAG 2 cut(s) 2561, 3131
BssT1I CCWWGG 3 cut(s) 335, 1976, 2067
Bst1107I GTATAC 1 cut(s) 1901
Bst2BI CACGAG 2 cut(s) 2561, 3131
Bst2UI CCWGG 4 cut(s) 2075, 3139, 3161, 4052
Bst6I CTCTTC 6 cut(s) 82, 757, 1135, 1478, 2771, 3425
BstACI GRCGYC 1 cut(s) 3617
BstAPI GCANNNNNTGC 1 cut(s) 812
BstAUI TGTACA 2 cut(s) 1188, 1446
BstBI TTCGAA 1 cut(s) 4364
BstC8I GCNNGC 8 cut(s) 130, 921, 1780, 1932, 2431, 2788, 3528, 3884
BstDSI CCRYGG 3 cut(s) 1976, 2067, 4245
BstH2I RGCGCY 2 cut(s) 2981, 3620
BstHHI GCGC 2 cut(s) 2980, 3619
BstMAI GTCTC 7 cut(s) 101, 678, 1331, 1792, 3134, 4199, 4214
BstNI CCWGG 4 cut(s) 2075, 3139, 3161, 4052
BstNSI RCATGY 3 cut(s) 907, 1793, 2848
BstSCI CCNGG 4 cut(s) 2073, 3137, 3159, 4050
BstSFI CTRYAG 5 cut(s) 2223, 3524, 3884, 3968, 4173
BstV1I GCAGC 8 cut(s) 827, 1025, 1207, 2339, 2822, 3481, 3982, 4114
BstV2I GAAGAC 4 cut(s) 181, 2878, 2899, 3021
BstX2I RGATCY 7 cut(s) 6, 357, 1378, 1980, 2455, 3961, 4391
BstYI RGATCY 7 cut(s) 6, 357, 1378, 1980, 2455, 3961, 4391
BstZ17I GTATAC 1 cut(s) 1901
Bsu36I CCTNAGG 1 cut(s) 3708
BtgI CCRYGG 3 cut(s) 1976, 2067, 4245
BtrI CACGTC 2 cut(s) 54, 2761
BtsI GCAGTG 2 cut(s) 1467, 3207
BveI ACCTGC 1 cut(s) 3471
Cac8I GCNNGC 8 cut(s) 130, 921, 1780, 1932, 2431, 2788, 3528, 3884
CciI TCATGA 1 cut(s) 1524
CfoI GCGC 2 cut(s) 2980, 3619
Cfr10I RCCGGY 1 cut(s) 2429
Cfr13I GGNCC 6 cut(s) 340, 845, 1064, 2071, 3713, 3922
CseI GACGC 1 cut(s) 4078
Csp6I GTAC 9 cut(s) 96, 874, 1057, 1189, 1447, 2370, 3187, 3196, 3722
CviQI GTAC 9 cut(s) 96, 874, 1057, 1189, 1447, 2370, 3187, 3196, 3722
DinI GGCGCC 1 cut(s) 3618
DraI TTTAAA 1 cut(s) 640
EaeI YGGCCR 4 cut(s) 1020, 1230, 3222, 3656
Eam1104I CTCTTC 6 cut(s) 82, 757, 1135, 1478, 2771, 3425
EarI CTCTTC 6 cut(s) 82, 757, 1135, 1478, 2771, 3425
Ecl136II GAGCTC 1 cut(s) 3832
Eco130I CCWWGG 3 cut(s) 335, 1976, 2067
Eco147I AGGCCT 1 cut(s) 3882
Eco24I GRGCYC 1 cut(s) 3834
Eco31I GGTCTC 1 cut(s) 1792
Eco32I GATATC 2 cut(s) 2647, 3573
Eco47I GGWCC 6 cut(s) 340, 845, 1064, 2071, 3713, 3922
Eco53kI GAGCTC 1 cut(s) 3832
Eco57I CTGAAG 3 cut(s) 681, 1716, 2949
Eco81I CCTNAGG 1 cut(s) 3708
Eco88I CYCGRG 2 cut(s) 551, 3360
EcoICRI GAGCTC 1 cut(s) 3832
EcoO109I RGGNCCY 2 cut(s) 340, 3922
EcoRI GAATTC 6 cut(s) 464, 1121, 1656, 1664, 3585, 4379
EcoRII CCWGG 4 cut(s) 2073, 3137, 3159, 4050
EcoRV GATATC 2 cut(s) 2647, 3573
EcoT14I CCWWGG 3 cut(s) 335, 1976, 2067
EcoT22I ATGCAT 1 cut(s) 1523
EcoT38I GRGCYC 1 cut(s) 3834
EgeI GGCGCC 1 cut(s) 3618
EheI GGCGCC 1 cut(s) 3618
ErhI CCWWGG 3 cut(s) 335, 1976, 2067
FalI AAGNNNNNCTT 4 cut(s) 319, 351, 908, 940
FaqI GGGAC 4 cut(s) 660, 831, 1949, 2015
FauI CCCGC 1 cut(s) 3070
FauNDI CATATG 2 cut(s) 3502, 3661
FbaI TGATCA 1 cut(s) 402
FblI GTMKAC 7 cut(s) 1000, 1900, 2178, 2524, 2731, 3051, 4015
Fnu4HI GCNGC 9 cut(s) 816, 1014, 1221, 1458, 2328, 2811, 3495, 3971, 4103
FriOI GRGCYC 1 cut(s) 3834
Fsp4HI GCNGC 9 cut(s) 816, 1014, 1221, 1458, 2328, 2811, 3495, 3971, 4103
GlaI GCGC 2 cut(s) 2979, 3618
GluI GCNGC 9 cut(s) 816, 1014, 1221, 1458, 2328, 2811, 3495, 3971, 4103
GsuI CTGGAG 4 cut(s) 1779, 2762, 4016, 4105
HaeII RGCGCY 2 cut(s) 2981, 3620
HapII CCGG 2 cut(s) 2430, 4255
HgaI GACGC 1 cut(s) 4078
HhaI GCGC 2 cut(s) 2980, 3619
Hin1I GRCGYC 1 cut(s) 3617
Hin6I GCGC 2 cut(s) 2978, 3617
HinP1I GCGC 2 cut(s) 2978, 3617
HincII GTYRAC 3 cut(s) 2525, 3052, 4016
HindII GTYRAC 3 cut(s) 2525, 3052, 4016
HindIII AAGCTT 4 cut(s) 917, 2613, 3633, 3943
HpaII CCGG 2 cut(s) 2430, 4255
HphI GGTGA 9 cut(s) 1088, 1476, 1919, 2297, 2477, 2824, 3547, 4234, 4244
Hpy99I CGWCG 1 cut(s) 4094
HpyCH4IV ACGT 6 cut(s) 53, 234, 1104, 1962, 2760, 3687
HpySE526I ACGT 6 cut(s) 53, 234, 1104, 1962, 2760, 3687
Hsp92I GRCGYC 1 cut(s) 3617
HspAI GCGC 2 cut(s) 2978, 3617
KasI GGCGCC 1 cut(s) 3616
KroI GCCGGC 1 cut(s) 2429
KroNI GCCGGC 1 cut(s) 2431
Ksp22I TGATCA 1 cut(s) 402
LmnI GCTCC 8 cut(s) 603, 732, 1142, 2781, 3253, 3284, 4053, 4086
Lsp1109I GCAGC 8 cut(s) 827, 1025, 1207, 2339, 2822, 3481, 3982, 4114
MaeII ACGT 6 cut(s) 53, 234, 1104, 1962, 2760, 3687
MaeIII GTNAC 8 cut(s) 286, 546, 581, 1504, 2710, 2756, 2830, 4277
MfeI CAATTG 1 cut(s) 3276
MflI RGATCY 7 cut(s) 6, 357, 1378, 1980, 2455, 3961, 4391
MhlI GDGCHC 4 cut(s) 324, 988, 2778, 3834
MlsI TGGCCA 4 cut(s) 1022, 1232, 3224, 3658
MluNI TGGCCA 4 cut(s) 1022, 1232, 3224, 3658
Mly113I GGCGCC 1 cut(s) 3617
MlyI GAGTC 5 cut(s) 947, 1333, 1365, 1763, 2990
MmeI TCCRAC 3 cut(s) 862, 1096, 4072
Mox20I TGGCCA 4 cut(s) 1022, 1232, 3224, 3658
Mph1103I ATGCAT 1 cut(s) 1523
MroNI GCCGGC 1 cut(s) 2429
MscI TGGCCA 4 cut(s) 1022, 1232, 3224, 3658
MslI CAYNNNNRTG 5 cut(s) 619, 1526, 3122, 3378, 4403
Msp20I TGGCCA 4 cut(s) 1022, 1232, 3224, 3658
MspA1I CMGCKG 1 cut(s) 818
MspI CCGG 2 cut(s) 2430, 4255
MspR9I CCNGG 4 cut(s) 2075, 3139, 3161, 4052
MunI CAATTG 1 cut(s) 3276
Mva1269I GAATGC 1 cut(s) 4235
MvaI CCWGG 4 cut(s) 2075, 3139, 3161, 4052
NaeI GCCGGC 1 cut(s) 2431
NarI GGCGCC 1 cut(s) 3617
NcoI CCATGG 2 cut(s) 1976, 2067
NdeI CATATG 2 cut(s) 3502, 3661
NgoMIV GCCGGC 1 cut(s) 2429
NheI GCTAGC 1 cut(s) 1778
NmeAIII GCCGAG 3 cut(s) 733, 967, 4312
NmuCI GTSAC 5 cut(s) 286, 2710, 2756, 2830, 4277
NsiI ATGCAT 1 cut(s) 1523
NspI RCATGY 3 cut(s) 907, 1793, 2848
NspV TTCGAA 1 cut(s) 4364
PaeR7I CTCGAG 2 cut(s) 551, 3360
PagI TCATGA 1 cut(s) 1524
PceI AGGCCT 1 cut(s) 3882
PciI ACATGT 3 cut(s) 903, 1789, 2844
PctI GAATGC 1 cut(s) 4235
PdiI GCCGGC 1 cut(s) 2431
PflMI CCANNNNNTGG 2 cut(s) 664, 1073
PfoI TCCNGGA 1 cut(s) 4050
PkrI GCNGC 9 cut(s) 817, 1015, 1222, 1459, 2329, 2812, 3496, 3972, 4104
PleI GAGTC 5 cut(s) 947, 1333, 1364, 1762, 2990
PluTI GGCGCC 1 cut(s) 3620
PpsI GAGTC 5 cut(s) 947, 1333, 1364, 1762, 2990
PpuMI RGGWCCY 2 cut(s) 340, 3922
PscI ACATGT 3 cut(s) 903, 1789, 2844
PshBI ATTAAT 1 cut(s) 2382
Psp124BI GAGCTC 1 cut(s) 3834
Psp5II RGGWCCY 2 cut(s) 340, 3922
Psp6I CCWGG 4 cut(s) 2073, 3137, 3159, 4050
PspGI CCWGG 4 cut(s) 2073, 3137, 3159, 4050
PspPI GGNCC 6 cut(s) 340, 845, 1064, 2071, 3713, 3922
PspPPI RGGWCCY 2 cut(s) 340, 3922
PspXI VCTCGAGB 1 cut(s) 551
PstI CTGCAG 3 cut(s) 3528, 3888, 3972
PsuI RGATCY 7 cut(s) 6, 357, 1378, 1980, 2455, 3961, 4391
PvuII CAGCTG 1 cut(s) 818
RsaI GTAC 9 cut(s) 97, 875, 1058, 1190, 1448, 2371, 3188, 3197, 3723
RsaNI GTAC 9 cut(s) 96, 874, 1057, 1189, 1447, 2370, 3187, 3196, 3722
RseI CAYNNNNRTG 5 cut(s) 619, 1526, 3122, 3378, 4403
SacI GAGCTC 1 cut(s) 3834
SalI GTCGAC 3 cut(s) 2523, 3050, 4014
SatI GCNGC 9 cut(s) 816, 1014, 1221, 1458, 2328, 2811, 3495, 3971, 4103
Sau96I GGNCC 6 cut(s) 340, 845, 1064, 2071, 3713, 3922
SbfI CCTGCAGG 2 cut(s) 3528, 3888
ScaI AGTACT 2 cut(s) 1058, 3197
SchI GAGTC 5 cut(s) 947, 1333, 1365, 1763, 2990
ScrFI CCNGG 4 cut(s) 2075, 3139, 3161, 4052
SdaI CCTGCAGG 2 cut(s) 3528, 3888
SduI GDGCHC 4 cut(s) 324, 988, 2778, 3834
SfcI CTRYAG 5 cut(s) 2223, 3524, 3884, 3968, 4173
SfoI GGCGCC 1 cut(s) 3618
Sfr274I CTCGAG 2 cut(s) 551, 3360
SfuI TTCGAA 1 cut(s) 4364
SinI GGWCC 6 cut(s) 340, 845, 1064, 2071, 3713, 3922
SlaI CTCGAG 2 cut(s) 551, 3360
SmiMI CAYNNNNRTG 5 cut(s) 619, 1526, 3122, 3378, 4403
SmlI CTYRAG 5 cut(s) 551, 2424, 3360, 3946, 4384
SmoI CTYRAG 5 cut(s) 551, 2424, 3360, 3946, 4384
Sse8387I CCTGCAGG 2 cut(s) 3528, 3888
SseBI AGGCCT 1 cut(s) 3882
SsiI CCGC 7 cut(s) 145, 222, 1457, 1860, 2903, 3077, 4376
SspDI GGCGCC 1 cut(s) 3616
SstI GAGCTC 1 cut(s) 3834
StuI AGGCCT 1 cut(s) 3882
StyD4I CCNGG 4 cut(s) 2073, 3137, 3159, 4050
StyI CCWWGG 3 cut(s) 335, 1976, 2067
TaiI ACGT 6 cut(s) 56, 237, 1107, 1965, 2763, 3690
TatI WGTACW 5 cut(s) 873, 1056, 1188, 1446, 3195
TauI GCSGC 1 cut(s) 1460
TseFI GTSAC 5 cut(s) 286, 2710, 2756, 2830, 4277
TseI GCWGC 8 cut(s) 815, 1013, 1220, 2327, 2810, 3494, 3970, 4102
Tsp45I GTSAC 5 cut(s) 286, 2710, 2756, 2830, 4277
TspGWI ACGGA 2 cut(s) 2112, 3391
Van91I CCANNNNNTGG 2 cut(s) 664, 1073
VpaK11BI GGWCC 6 cut(s) 340, 845, 1064, 2071, 3713, 3922
VspI ATTAAT 1 cut(s) 2382
XceI RCATGY 3 cut(s) 907, 1793, 2848
XcmI CCANNNNNNNNNTGG 3 cut(s) 1498, 1974, 3651
XhoI CTCGAG 2 cut(s) 551, 3360
XmiI GTMKAC 7 cut(s) 1000, 1900, 2178, 2524, 2731, 3051, 4015
ZrmI AGTACT 2 cut(s) 1058, 3197
Zsp2I ATGCAT 1 cut(s) 1523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.