RchiOBHm_Chr6g0306331

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
65047530 .. 65055453
7924 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27535

Sequence Viewer

Length: 4671 bp
ATGGAGATCTCTCTTGAAATTGTCAACGTTGGGTTTTTCATAGTGTTATTGACGTGGGTTTTGCTAGATACACTGAGGAGAAGAAGAAGAAGAAGAGATGGTACTGAAATTGAGACTTATTTGAGAGACAGAGCAAGCAGAGGATGTAAAGGTTTTGCTTTGGTAACACTCATTGCAAATGCCTTAATCTCAGTGTTCTATGTTGTTTTTGGAATTTATGATTATTGCGGTAGTGGAAATGTAAGTTTGAAATCAATCTTTTCTGGGATGACATGGGTGTTGGCAACAATAGTGACAATCTACTCCAATAACGAAGGTATTAGTGAGCACAAAAGGTGGCCTTGGGTCCTCATTTTTTGGTGGATATTTTCCTTCATTTTTTGCTCACTTTCTATGTGCCTTTACTTCGTCACCCACTATTTGAAATCTATAAAGTTGCCAGATATTCTTCCAAAGGCTAACATAGTCGAATTCGCTTCCTTTCCTCTGTCAATGTTACTTTGTTGCCATGCTTTAAGTTATATCCAGGAAGACGGTGATCTCAGAGAACCATTACTCGCCGAAGAGTATGAAATTCACACTGATAGTTACACTGATGCTGGGATTTGGAGCAAAGTCACATTCCAATGGCTAAATCCACTTTTCGAAAGAGGTCGAAACCAAAAGCTGGAACTATCTCATATACCATCTATTCCTCCTTCAGCAAGAGCTGAGAGTGCTTCTTTTTTGCTCCAAGAATCACTCGAACACCACTCTTCATTATTAAAAGCCATACTGAGGGCTGGATGGAAATCACTAGCCATAAATGCAATTTTTGCAGAGATTAGAAGTACGAATAGTCTCACAGTCTGTGAGAGAGGAAGAGAAAGAGATTGGAAATGGAAGACACTCACTCAAGCCTATTCCGACCTCCGACTTCAAAGATTTCAGCTTGCCGTTGAGACTGGATTAGTTTGGGGGCAGCAAACTATTGTCGGATTGAAGAGAGTGGTATCGGAAAGTGAGAGTTTTCTTCATCTTCTTCGGTGTTTGTTTAGAGAATGGTACTCTCACCATCAAAGAGAGAGAGTGATTGGTTGTAGACTTTTAGGACTCAATGTTGTTGCATCCTATATTGGTCCCTTCTTAATCAGAAACTTTATGAAGTATATAGTTGGAAAGTATGGTAGCTCAAACATGTATTATGGTGAGAAGCTTGCCTTCATATTCTTTTTTGCAATGACTTTGGAATCAATTACTCAAAGACAATTGTCTTTTGGTGCTCGACAAATTGGTCTACAAGTAAGAGCAGCTCTGACCACCTTAATCTACAAGAAGTGCATCTCAATTAAGTACTTTGGTCCAAGCAATGGTAAAGTTGTAAACTTAATCAACATGGATGTAGAAGTGGTTGGAGAATTCTTCTCTTCTATTCATGGAGTTTGGGTGCTTCCCCTTCAAGTGTTTTTGGCATTGGTTATCTTGTATGGAAATCTCGGTGCTGCCCCTTCTCTGGCAGCCTTTCTGACCACAGTAGCAGTACTGGTATGCAACACACCATTGGCTCGAAGGCAACAAAATCTCCAATCAAAAATCATGGAAGCAAAGGATTCAAGAATTAAAAGAACCTCAGAGACTCTAAAGAGCATGAGAGTCGTAAAATTCAATTCATGGGAAAATAGTTTCTTAGAGAAGCTACTTCAACTCAGAGAAACTGAGAAAAGTTGGTTAAAAAGATTTTTGTACACCAAGGCAACAGTGGTATTTCTCTTCTGGGCTTCACCAACTATAGTTTCAGTGATTACTTTTGGTACTTGCATTATGATGAGAACAACATTAGAACCATATACAGTCTTGTCAGCTTTAGCCACTTTCAGAATCCTTACCGAGCCTATTTACAACCTTCCAGAATTTATCTCGATGATTATTCAAACAAAGGTTTCGATTAAGCGAATTCAAGACTTCATCAGATTAGAAAAACAAGTGGGGCTGATTCCTCGTGATTATTCTTGCAGTACATTATCCACTTCAGAAATCATGGTTGAAATGGAGGCCGGTGAGTTTTCTTGGAAGGAAAGCAACGAACATATAGAGAGACCTACAATCACAATTAGAGAAAAAATAACTATGAGAAAGGGATGCAAGGTGGGAGTTTGCGGTTCTGTTGGCTCAGGCAAGTCTAGCCTACTATGCGGTATACTTGGTGAGATTCCAAAAATTTCTGGGCAAGCAACCAAGTGTTATGGAAAAAAATCTTATGTCGCACAAAGTCCATGGATCCAAACTGGAACCGTAAGGGACAACATCTTGTTTGGTAAGGAGGTGAATGAGGGTTTCTATAAGAACATTGTGGAATGTTGTGCTATGAACAAGGATTTCAAGATGTGGTCTAACGGAGATATGACAGTCGTGGGGGAAAGAGGAATGAGTCTAAGTGGAGGCCAAAAACAAAGGATTCAACTCGCAAGAGCTGTCTACAATGATGCTGATGTATATATCTTGGACGACCCTTTCAGTGCTGTAGATGCACATACAGGAACACATTTGTTCAAGAAATGTATCTTGCAAGAATTGTCTGAAAAAACCGTTATCTATGCTACTCACCAACTAGAATTTTTGGAAGCAGCAGACTATATTTTGATTAATTTTGATGATATTCAGGTAGTTAAAGATGGTCAAATTGCTCAGTCTGGCACTTACGAGAAGTTGATTGAAGATCCTAATGGTGAACTTGTCAGACAAATGACTGCACATAGAAAATCTCTACACCACGTTCACAGCAGTCCACCGGATTCTTTGAGCAACACCACAACTACTGTCAACATGAAAAATGGAATTACTGAAAGAGTATTAGATACTGAAGAAACGGAAAGAGCCTCAACCAATGACCAGATTACTGTCAAAGAGATCCGAGAAGAAGAAGAAGAAGCTCAGACTGGTCGCGTAAAATGGAGTGTATATTCTACATTTTTGACTTGTGCTTTAAGAGGTCTACTTCCAGTGATCCTTCTCTGTCACGTCCTCTTCCAAGTGCTCCAGATGGCAAGCAACTACTGGATTGCTTGGGCAGTAAGGAAGGAAAACACTGTCACCAGAGGAAACATGATCTGGATTTTCGCTTGTTTATCTGGCGGAAGCTCTGTCTTCGTCTTGGGAAGGGCGGTTTTCCTTTCAGTTGTCACTATTGAAACTTCCCAGCATCTCTTTGTTGGGATGATTACTTCAGTTTTCCGAGCGCCTATGGCATTTTTCGACTCTACACCTTCTAGTCAAATCCTCACTAGGTCTTCAACAGATCAAAGCACAGTCGACACAGATATTACATTCAGGTTAGGGGGGCTGGTATTTGCACTCATTCAACTAGCATGCACTATCATCCTTATGTGTCTCGTGGCTTGGCAAGTCTTCATACTTTTCCTTGTCGTCATTGCAATTTCCTTTTGGTACATGAAGTACTATATTACCACTGCCAGAGAACTGGCCAGAATGGTTGCAACTCAAAAGGCTCCAATACTGCATCATTTTTCAGAATCAATTGCAGGAGCTACAACGATTCGTTGTTTCAATCAACAAAATCGCTTCTTGACAAAAGCAATGAATGAAATTGATGACTTTTCTCGAGTAGCTCTTCATAACAATGCAACAATGGAATGGCTATCTGTGAGAATAAATTTTCTCTTCAATGTTGCTTTCCTTGTAGTGCTTATTGTCTTGGTAAACCTGCCTAAGTCTGTCATTGACCCTAGTTTGGCAGGAGTGGCTGCATCATATGGTTTAAACCTTAGTGTCCTGCAGGGTTGGGTGATTTGGAATCTATGCAATGTTGAAAACAAAATGATATCTGTTCAGAGAATTCTTCAATTCACTGGAATACAAAGTGAGGCACCACTTGTGATCGAAGCTTCTAGGCCAAACTCTGAATGGCTAACTGAAGGACAAATTGAATTTCAAAACGTGCAAGTTCAATATCAGCCTGAGGGTCCAATGGTATTGAAAGGGATCTCTTGCACATTCTCTAAAAGGATGAAAATTGGAGTGGTGGGAAGAACAGGAAGTGGAAAGTCCACTATGATCCAAGCCTTGTTTAGAGTTGTTGAGCTCTCAGGAGGGAAAATTCTCATTGATGAACAAGACATTTCTAAAATAGGCCTGCAGGATTTAAGGTCAATTTTAGGCATAATTCCACAAGACCCAACTTTATTTCAAGGAAGCTTGAGGACTAATCTTGATCCTCTGCAGCAGCATTCTGATCCAGAAATGTTAGAGGTTGTGAAGAAATGTCGACTTGGGAACTTAGTGAGGCCAGACCAAATGTTCCTGGATGCACCTGTTTCTGAAGATGGAGAAAACTGGAGCGTCGGACAGAGGCAGCTTATTTGTCTAGCCAGAGTGCTTCTAAAGAAGAGGAAAATTCTAGTGCTAGATGAGGCGACAGCATCTATAGATACAGCAACCGATAATGCAATTCAAGAGACGATAAGAAAAGAGACAAGTGAATGCACAGTTATCACCGTGGCTCACCGGATTCCTACTGTTATGGACAGTGACATGGTTCTAGTTCTTGATGAAGGTAGGATTGTGGAGTATGACTCTCCTGCTCGGCTGATTAAGGAAAGCTCTTCTGCATTTTCGAAGTTGGTTGTGGAATTCTTGAGGAGATCTTCCAGGAGAAAGAACAACTGCTCATCTTGA

Protein Analysis

1556

Amino Acids

175.95

Weight (kDa)

8.66

Isoelectric Point (pI)

40.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 365 - 624 6.1e-20 ABC transporter transmembrane region
ABC_tran PF00005 701 - 831 3.5e-15 ABC transporter
ABC_membrane PF00664 996 - 1232 7.7e-30 ABC transporter transmembrane region
ABC_tran PF00005 1324 - 1472 4.8e-25 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1272
Acc36I ACCTGC 1 cut(s) 3708
AccB1I GGYRCC 1 cut(s) 3862
AccB7I CCANNNNNTGG 2 cut(s) 667, 1349
AccI GTMKAC 7 cut(s) 1081, 1276, 2176, 2454, 2971, 3288, 4261
AccII CGCG 1 cut(s) 2922
AciI CCGC 5 cut(s) 228, 2136, 2172, 3111, 3140
AclI AACGTT 1 cut(s) 27
AclWI GGATC 9 cut(s) 2251, 2264, 2690, 2881, 2977, 3986, 4045, 4202, 4223
AcoI YGGCCR 1 cut(s) 3459
AcuI CTGAAG 6 cut(s) 684, 1992, 2859, 3186, 3930, 4335
AfiI CCNNNNNNNGG 5 cut(s) 667, 777, 1349, 1492, 3727
AflIII ACRYGT 1 cut(s) 1176
AjiI CACGTC 2 cut(s) 54, 2998
AjnI CCWGG 3 cut(s) 525, 4296, 4643
AjuI GAANNNNNNNTTGG 2 cut(s) 1756, 1788
Alw21I GWGCWC 4 cut(s) 330, 1264, 3015, 4080
Alw26I GTCTC 9 cut(s) 107, 120, 845, 935, 1607, 2068, 3371, 4445, 4460
AlwI GGATC 9 cut(s) 2251, 2264, 2690, 2881, 2977, 3986, 4045, 4202, 4223
Ama87I CYCGRG 1 cut(s) 3597
AoxI GGCC 7 cut(s) 338, 2031, 2419, 3459, 3887, 4126, 4280
ApeKI GCWGC 9 cut(s) 961, 1289, 1481, 1496, 2603, 3740, 4216, 4219, 4348
ArsI GACNNNNNNTTYG 2 cut(s) 43, 75
AseI ATTAAT 1 cut(s) 2622
AspLEI GCGC 1 cut(s) 3217
AspS9I GGNCC 4 cut(s) 346, 1118, 1340, 3959
AsuII TTCGAA 2 cut(s) 645, 4610
AvaI CYCGRG 1 cut(s) 3597
AvaII GGWCC 4 cut(s) 346, 1118, 1340, 3959
AxyI CCTNAGG 1 cut(s) 3954
BalI TGGCCA 1 cut(s) 3461
BamHI GGATCC 1 cut(s) 2256
BanI GGYRCC 1 cut(s) 3862
BanII GRGCYC 1 cut(s) 4080
BarI GAAGNNNNNNTAC 2 cut(s) 85, 117
BauI CACGAG 2 cut(s) 1977, 3368
BbsI GAAGAC 5 cut(s) 537, 890, 3115, 3258, 3376
Bbv12I GWGCWC 4 cut(s) 330, 1264, 3015, 4080
BbvI GCAGC 9 cut(s) 973, 1301, 1468, 1508, 2615, 3727, 4228, 4231, 4360
BccI CCATC 7 cut(s) 92, 694, 780, 1062, 2645, 3013, 4313
BceAI ACGGC 1 cut(s) 920
BcgI CGANNNNNNTGC 2 cut(s) 1615, 1649
BciT130I CCWGG 3 cut(s) 527, 4298, 4645
BcoDI GTCTC 9 cut(s) 107, 120, 845, 935, 1607, 2068, 3371, 4445, 4460
BfmI CTRYAG 6 cut(s) 1767, 2499, 3770, 4130, 4214, 4419
BfoI RGCGCY 1 cut(s) 3218
BfuAI ACCTGC 1 cut(s) 3708
BglII AGATCT 2 cut(s) 6, 4637
BisI GCNGC 9 cut(s) 962, 1290, 1482, 1497, 2604, 3741, 4217, 4220, 4349
BlsI GCNGC 9 cut(s) 963, 1291, 1483, 1498, 2605, 3742, 4218, 4221, 4350
BmcAI AGTACT 3 cut(s) 1334, 1521, 3434
Bme1390I CCNGG 3 cut(s) 527, 4298, 4645
Bme18I GGWCC 4 cut(s) 346, 1118, 1340, 3959
BmeT110I CYCGRG 1 cut(s) 3597
BmgBI CACGTC 2 cut(s) 54, 2998
BmgT120I GGNCC 4 cut(s) 346, 1118, 1340, 3959
BmiI GGNNCC 7 cut(s) 347, 1120, 2258, 2269, 3486, 3864, 3960
BmrFI CCNGG 3 cut(s) 527, 4298, 4645
BoxI GACNNNNGTC 1 cut(s) 1249
BpiI GAAGAC 5 cut(s) 537, 890, 3115, 3258, 3376
BplI GAGNNNNNCTC 2 cut(s) 4553, 4585
BpmI CTGGAG 2 cut(s) 2999, 4351
Bpu10I CCTNAGC 1 cut(s) 2149
Bpu14I TTCGAA 2 cut(s) 645, 4610
BpuEI CTTGAG 3 cut(s) 879, 4213, 4651
BsaBI GATNNNNATC 1 cut(s) 790
BsaI GGTCTC 1 cut(s) 2068
BsaJI CCNNGG 4 cut(s) 341, 1728, 2252, 4491
BsaWI WCCGGW 2 cut(s) 2767, 4500
BsaXI ACNNNNNCTCC 4 cut(s) 1410, 1440, 1545, 1575
Bsc4I CCNNNNNNNGG 5 cut(s) 667, 777, 1349, 1492, 3727
Bse118I RCCGGY 1 cut(s) 2033
Bse1I ACTGG 9 cut(s) 949, 1527, 2269, 2920, 2978, 3038, 3462, 3850, 4334
Bse21I CCTNAGG 1 cut(s) 3954
Bse3DI GCAATG 6 cut(s) 171, 1224, 1354, 3405, 3579, 3805
Bse8I GATNNNNATC 1 cut(s) 790
BseBI CCWGG 3 cut(s) 527, 4298, 4645
BseDI CCNNGG 4 cut(s) 341, 1728, 2252, 4491
BseJI GATNNNNATC 1 cut(s) 790
BseLI CCNNNNNNNGG 5 cut(s) 667, 777, 1349, 1492, 3727
BseMI GCAATG 6 cut(s) 171, 1224, 1354, 3405, 3579, 3805
BseNI ACTGG 9 cut(s) 949, 1527, 2269, 2920, 2978, 3038, 3462, 3850, 4334
BseRI GAGGAG 2 cut(s) 91, 4648
BseXI GCAGC 9 cut(s) 973, 1301, 1468, 1508, 2615, 3727, 4228, 4231, 4360
BseYI CCCAGC 2 cut(s) 599, 3174
BsgI GTGCAG 1 cut(s) 2712
Bsh1236I CGCG 1 cut(s) 2922
BshFI GGCC 7 cut(s) 340, 2033, 2421, 3461, 3889, 4128, 4282
BshNI GGYRCC 1 cut(s) 3862
BsiHKAI GWGCWC 4 cut(s) 330, 1264, 3015, 4080
BsiHKCI CYCGRG 1 cut(s) 3597
BsiSI CCGG 3 cut(s) 2034, 2768, 4501
BslFI GGGAC 2 cut(s) 1104, 2291
BslI CCNNNNNNNGG 5 cut(s) 667, 777, 1349, 1492, 3727
BsmAI GTCTC 9 cut(s) 107, 120, 845, 935, 1607, 2068, 3371, 4445, 4460
BsmBI CGTCTC 1 cut(s) 4445
BsmFI GGGAC 2 cut(s) 1104, 2291
BsmI GAATGC 2 cut(s) 4222, 4481
BsnI GGCC 7 cut(s) 340, 2033, 2421, 3461, 3889, 4128, 4282
Bso31I GGTCTC 1 cut(s) 2068
BsoBI CYCGRG 1 cut(s) 3597
Bsp119I TTCGAA 2 cut(s) 645, 4610
Bsp1286I GDGCHC 4 cut(s) 330, 1264, 3015, 4080
Bsp1407I TGTACA 1 cut(s) 1722
Bsp19I CCATGG 1 cut(s) 2252
BspACI CCGC 5 cut(s) 228, 2136, 2172, 3111, 3140
BspANI GGCC 7 cut(s) 340, 2033, 2421, 3461, 3889, 4128, 4282
BspFNI CGCG 1 cut(s) 2922
BspLI GGNNCC 7 cut(s) 347, 1120, 2258, 2269, 3486, 3864, 3960
BspMAI CTGCAG 3 cut(s) 3774, 4134, 4218
BspMI ACCTGC 1 cut(s) 3708
BspPI GGATC 9 cut(s) 2251, 2264, 2690, 2881, 2977, 3986, 4045, 4202, 4223
BspQI GCTCTTC 2 cut(s) 3612, 4603
BspT104I TTCGAA 2 cut(s) 645, 4610
BspT107I GGYRCC 1 cut(s) 3862
BspTNI GGTCTC 1 cut(s) 2068
BsrDI GCAATG 6 cut(s) 171, 1224, 1354, 3405, 3579, 3805
BsrFI RCCGGY 1 cut(s) 2033
BsrGI TGTACA 1 cut(s) 1722
BsrI ACTGG 9 cut(s) 949, 1527, 2269, 2920, 2978, 3038, 3462, 3850, 4334
BssAI RCCGGY 1 cut(s) 2033
BssECI CCNNGG 4 cut(s) 341, 1728, 2252, 4491
BssNAI GTATAC 1 cut(s) 2177
BssSI CACGAG 2 cut(s) 1977, 3368
BssT1I CCWWGG 3 cut(s) 341, 1728, 2252
Bst1107I GTATAC 1 cut(s) 2177
Bst2BI CACGAG 2 cut(s) 1977, 3368
Bst2UI CCWGG 3 cut(s) 527, 4298, 4645
BstAPI GCANNNNNTGC 1 cut(s) 815
BstAUI TGTACA 1 cut(s) 1722
BstBI TTCGAA 2 cut(s) 645, 4610
BstC8I GCNNGC 7 cut(s) 136, 933, 1197, 2208, 3025, 3346, 4130
BstDSI CCRYGG 2 cut(s) 2252, 4491
BstFNI CGCG 1 cut(s) 2922
BstH2I RGCGCY 1 cut(s) 3218
BstHHI GCGC 1 cut(s) 3217
BstMAI GTCTC 9 cut(s) 107, 120, 845, 935, 1607, 2068, 3371, 4445, 4460
BstMWI GCNNNNNNNGC 8 cut(s) 716, 806, 815, 2160, 2169, 2504, 3221, 3737
BstNI CCWGG 3 cut(s) 527, 4298, 4645
BstNSI RCATGY 2 cut(s) 1180, 3348
BstPAI GACNNNNGTC 1 cut(s) 1249
BstSCI CCNGG 3 cut(s) 525, 4296, 4643
BstSFI CTRYAG 6 cut(s) 1767, 2499, 3770, 4130, 4214, 4419
BstUI CGCG 1 cut(s) 2922
BstV1I GCAGC 9 cut(s) 973, 1301, 1468, 1508, 2615, 3727, 4228, 4231, 4360
BstV2I GAAGAC 5 cut(s) 537, 890, 3115, 3258, 3376
BstX2I RGATCY 6 cut(s) 6, 2256, 2695, 2886, 3978, 4637
BstXI CCANNNNNNTGG 1 cut(s) 3457
BstYI RGATCY 6 cut(s) 6, 2256, 2695, 2886, 3978, 4637
BstZ17I GTATAC 1 cut(s) 2177
Bsu36I CCTNAGG 1 cut(s) 3954
BsuRI GGCC 7 cut(s) 340, 2033, 2421, 3461, 3889, 4128, 4282
BtgI CCRYGG 2 cut(s) 2252, 4491
BtrI CACGTC 2 cut(s) 54, 2998
BtsI GCAGTG 1 cut(s) 3444
BveI ACCTGC 1 cut(s) 3708
Cac8I GCNNGC 7 cut(s) 136, 933, 1197, 2208, 3025, 3346, 4130
CfoI GCGC 1 cut(s) 3217
Cfr10I RCCGGY 1 cut(s) 2033
Cfr13I GGNCC 4 cut(s) 346, 1118, 1340, 3959
CseI GACGC 1 cut(s) 4324
DraI TTTAAA 1 cut(s) 3756
DrdI GACNNNNNNGTC 1 cut(s) 1272
DseDI GACNNNNNNGTC 1 cut(s) 1272
EaeI YGGCCR 1 cut(s) 3459
EciI GGCGGA 1 cut(s) 3126
Ecl136II GAGCTC 1 cut(s) 4078
Eco130I CCWWGG 3 cut(s) 341, 1728, 2252
Eco147I AGGCCT 1 cut(s) 4128
Eco24I GRGCYC 1 cut(s) 4080
Eco31I GGTCTC 1 cut(s) 2068
Eco32I GATATC 1 cut(s) 3819
Eco47I GGWCC 4 cut(s) 346, 1118, 1340, 3959
Eco53kI GAGCTC 1 cut(s) 4078
Eco57I CTGAAG 6 cut(s) 684, 1992, 2859, 3186, 3930, 4335
Eco81I CCTNAGG 1 cut(s) 3954
Eco88I CYCGRG 1 cut(s) 3597
EcoICRI GAGCTC 1 cut(s) 4078
EcoO109I RGGNCCY 1 cut(s) 346
EcoRI GAATTC 5 cut(s) 470, 1397, 1932, 3831, 4625
EcoRII CCWGG 3 cut(s) 525, 4296, 4643
EcoRV GATATC 1 cut(s) 3819
EcoT14I CCWWGG 3 cut(s) 341, 1728, 2252
EcoT38I GRGCYC 1 cut(s) 4080
ErhI CCWWGG 3 cut(s) 341, 1728, 2252
Esp3I CGTCTC 1 cut(s) 4445
FalI AAGNNNNNCTT 4 cut(s) 325, 357, 1184, 1216
FaqI GGGAC 2 cut(s) 1104, 2291
FauNDI CATATG 1 cut(s) 3748
FblI GTMKAC 7 cut(s) 1081, 1276, 2176, 2454, 2971, 3288, 4261
Fnu4HI GCNGC 9 cut(s) 962, 1290, 1482, 1497, 2604, 3741, 4217, 4220, 4349
FriOI GRGCYC 1 cut(s) 4080
Fsp4HI GCNGC 9 cut(s) 962, 1290, 1482, 1497, 2604, 3741, 4217, 4220, 4349
GlaI GCGC 1 cut(s) 3216
GluI GCNGC 9 cut(s) 962, 1290, 1482, 1497, 2604, 3741, 4217, 4220, 4349
GsaI CCCAGC 2 cut(s) 603, 3178
GsuI CTGGAG 2 cut(s) 2999, 4351
HaeII RGCGCY 1 cut(s) 3218
HaeIII GGCC 7 cut(s) 340, 2033, 2421, 3461, 3889, 4128, 4282
HapII CCGG 3 cut(s) 2034, 2768, 4501
HgaI GACGC 1 cut(s) 4324
HhaI GCGC 1 cut(s) 3217
Hin6I GCGC 1 cut(s) 3215
HinP1I GCGC 1 cut(s) 3215
HincII GTYRAC 4 cut(s) 25, 2800, 3289, 4262
HindII GTYRAC 4 cut(s) 25, 2800, 3289, 4262
HindIII AAGCTT 3 cut(s) 1193, 3879, 4189
HpaII CCGG 3 cut(s) 2034, 2768, 4501
Hpy99I CGWCG 1 cut(s) 4340
HpyCH4IV ACGT 5 cut(s) 27, 53, 2751, 2997, 3933
HpyF10VI GCNNNNNNNGC 8 cut(s) 716, 806, 815, 2160, 2169, 2504, 3221, 3737
HpySE526I ACGT 5 cut(s) 27, 53, 2751, 2997, 3933
HspAI GCGC 1 cut(s) 3215
LguI GCTCTTC 2 cut(s) 3612, 4603
LmnI GCTCC 6 cut(s) 609, 735, 3018, 3490, 3521, 4332
Lsp1109I GCAGC 9 cut(s) 973, 1301, 1468, 1508, 2615, 3727, 4228, 4231, 4360
MaeII ACGT 5 cut(s) 27, 53, 2751, 2997, 3933
MfeI CAATTG 2 cut(s) 1247, 3513
MflI RGATCY 6 cut(s) 6, 2256, 2695, 2886, 3978, 4637
MhlI GDGCHC 4 cut(s) 330, 1264, 3015, 4080
MlsI TGGCCA 1 cut(s) 3461
MluNI TGGCCA 1 cut(s) 3461
MlyI GAGTC 6 cut(s) 1086, 1609, 1641, 2416, 3227, 4562
MmeI TCCRAC 6 cut(s) 930, 937, 955, 1135, 1372, 4318
Mox20I TGGCCA 1 cut(s) 3461
MscI TGGCCA 1 cut(s) 3461
MslI CAYNNNNRTG 4 cut(s) 625, 1802, 3359, 3615
Msp20I TGGCCA 1 cut(s) 3461
MspI CCGG 3 cut(s) 2034, 2768, 4501
MspR9I CCNGG 3 cut(s) 527, 4298, 4645
MssI GTTTAAAC 1 cut(s) 3756
MunI CAATTG 2 cut(s) 1247, 3513
Mva1269I GAATGC 2 cut(s) 4222, 4481
MvaI CCWGG 3 cut(s) 527, 4298, 4645
MvnI CGCG 1 cut(s) 2922
MwoI GCNNNNNNNGC 8 cut(s) 716, 806, 815, 2160, 2169, 2504, 3221, 3737
NcoI CCATGG 1 cut(s) 2252
NdeI CATATG 1 cut(s) 3748
NlaIV GGNNCC 7 cut(s) 347, 1120, 2258, 2269, 3486, 3864, 3960
NmeAIII GCCGAG 1 cut(s) 4558
NmuCI GTSAC 7 cut(s) 292, 409, 616, 2993, 3067, 3157, 4523
NspI RCATGY 2 cut(s) 1180, 3348
NspV TTCGAA 2 cut(s) 645, 4610
PaeI GCATGC 1 cut(s) 3348
PaeR7I CTCGAG 1 cut(s) 3597
PceI AGGCCT 1 cut(s) 4128
PciI ACATGT 1 cut(s) 1176
PciSI GCTCTTC 2 cut(s) 3612, 4603
PctI GAATGC 2 cut(s) 4222, 4481
PflMI CCANNNNNTGG 2 cut(s) 667, 1349
PfoI TCCNGGA 3 cut(s) 525, 4296, 4643
PkrI GCNGC 9 cut(s) 963, 1291, 1483, 1498, 2605, 3742, 4218, 4221, 4350
PleI GAGTC 6 cut(s) 1086, 1609, 1640, 2415, 3227, 4562
PmeI GTTTAAAC 1 cut(s) 3756
PpsI GAGTC 6 cut(s) 1086, 1609, 1640, 2415, 3227, 4562
PpuMI RGGWCCY 1 cut(s) 346
PscI ACATGT 1 cut(s) 1176
PshAI GACNNNNGTC 1 cut(s) 1249
PshBI ATTAAT 1 cut(s) 2622
Psp124BI GAGCTC 1 cut(s) 4080
Psp1406I AACGTT 1 cut(s) 27
Psp5II RGGWCCY 1 cut(s) 346
Psp6I CCWGG 3 cut(s) 525, 4296, 4643
PspFI CCCAGC 2 cut(s) 599, 3174
PspGI CCWGG 3 cut(s) 525, 4296, 4643
PspN4I GGNNCC 7 cut(s) 347, 1120, 2258, 2269, 3486, 3864, 3960
PspPI GGNCC 4 cut(s) 346, 1118, 1340, 3959
PspPPI RGGWCCY 1 cut(s) 346
PstI CTGCAG 3 cut(s) 3774, 4134, 4218
PsuI RGATCY 6 cut(s) 6, 2256, 2695, 2886, 3978, 4637
RseI CAYNNNNRTG 4 cut(s) 625, 1802, 3359, 3615
SacI GAGCTC 1 cut(s) 4080
SalI GTCGAC 2 cut(s) 3287, 4260
SapI GCTCTTC 2 cut(s) 3612, 4603
SatI GCNGC 9 cut(s) 962, 1290, 1482, 1497, 2604, 3741, 4217, 4220, 4349
Sau96I GGNCC 4 cut(s) 346, 1118, 1340, 3959
SbfI CCTGCAGG 2 cut(s) 3774, 4134
ScaI AGTACT 3 cut(s) 1334, 1521, 3434
SchI GAGTC 6 cut(s) 1086, 1609, 1641, 2416, 3227, 4562
ScrFI CCNGG 3 cut(s) 527, 4298, 4645
SdaI CCTGCAGG 2 cut(s) 3774, 4134
SduI GDGCHC 4 cut(s) 330, 1264, 3015, 4080
SfcI CTRYAG 6 cut(s) 1767, 2499, 3770, 4130, 4214, 4419
Sfr274I CTCGAG 1 cut(s) 3597
SfuI TTCGAA 2 cut(s) 645, 4610
SinI GGWCC 4 cut(s) 346, 1118, 1340, 3959
SlaI CTCGAG 1 cut(s) 3597
SmiMI CAYNNNNRTG 4 cut(s) 625, 1802, 3359, 3615
SmlI CTYRAG 4 cut(s) 894, 3597, 4192, 4630
SmoI CTYRAG 4 cut(s) 894, 3597, 4192, 4630
SphI GCATGC 1 cut(s) 3348
Sse8387I CCTGCAGG 2 cut(s) 3774, 4134
SseBI AGGCCT 1 cut(s) 4128
SsiI CCGC 5 cut(s) 228, 2136, 2172, 3111, 3140
SstI GAGCTC 1 cut(s) 4080
StuI AGGCCT 1 cut(s) 4128
StyD4I CCNGG 3 cut(s) 525, 4296, 4643
StyI CCWWGG 3 cut(s) 341, 1728, 2252
TaiI ACGT 5 cut(s) 30, 56, 2754, 3000, 3936
TatI WGTACW 5 cut(s) 1332, 1519, 1722, 1994, 3432
TseFI GTSAC 7 cut(s) 292, 409, 616, 2993, 3067, 3157, 4523
TseI GCWGC 9 cut(s) 961, 1289, 1481, 1496, 2603, 3740, 4216, 4219, 4348
Tsp45I GTSAC 7 cut(s) 292, 409, 616, 2993, 3067, 3157, 4523
TspGWI ACGGA 2 cut(s) 2388, 2861
Van91I CCANNNNNTGG 2 cut(s) 667, 1349
VpaK11BI GGWCC 4 cut(s) 346, 1118, 1340, 3959
VspI ATTAAT 1 cut(s) 2622
XceI RCATGY 2 cut(s) 1180, 3348
XcmI CCANNNNNNNNNTGG 2 cut(s) 1735, 3897
XhoI CTCGAG 1 cut(s) 3597
XmiI GTMKAC 7 cut(s) 1081, 1276, 2176, 2454, 2971, 3288, 4261
ZrmI AGTACT 3 cut(s) 1334, 1521, 3434
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.