Rw6G040190

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
64043266 .. 64051467
8202 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G040190.1

Sequence Viewer

Length: 4380 bp
ATGGAGATCTCTCTTGAAATTGTCAATTTTGGGTTTTTCATAGTGTTATTGACGTGGGTTTTGCTAGATACACTGAGAAGAAGAAGAAGAAGAGATGGTATTGAAATTGAGACATATTTGAGAGACAGAGCAAGCAGAGGATGTAAAGGTTTTGCTTTGGTAACACTTATTGCAAATGCCTTAATCTCAGTGTTCTATGTTGTTTTTGGAATTTATGACTATTGCGGTGGTGGAAATGTAAGTTTGAAATCAATCTTTTCTGGGATGACATGGGTGTTGGCAACAATAGTGACAATCTACTCCAAGAACAGAGGTATTAGTGAGCACAAAAGGTGGCCTTGGGTCCTCATTTTTTGGTGGATATTTTCCTTCATTTTTTGCTCACTTTCTGTGTGCCTTTACTTCGTCACCCACTATTTGAAATCTACAAAGTTGCCGGATATTCTTCCAAAGGCTAACATAGTCGAATTCGCTTCCTTTCCTCTGTCAATGTTACTTTGTTGCCATGCTTTAAGTTATATCCAGAAAGACGGTGATCTCAAAGAACCATTACTAGTCGAGGAGTATGAAATTCACACTGATAGTTACACTGATGCTGGGATTTGGAGCAAAGTCACATTCCTATGGCTAAATCCACTTTTTGAAAGAGGTCGAAACCAAAAGTTGGAACTATCTCATATACCATCTATTCCTCCTTCAGCAAGAGCCGAGAGTGCTTCTTCTTTGCTCCAAGAATCGCTCCAACACCACTCTTCATTATTAAAAGCCATACTGAGGGCAGGATGGAAATCACTAGCCATAAATGCTGTTTTTGTAGGAGTCAATGTTGTTGCACCCTATACTGGTCCCTTCTTAATCAGAAACTTTATGAAGTATATAGTTGGAAAGTATGGCAGCTCAAACATGTATTATGGTGAGAAGCTTGCATTCATATTCTTTTTTGCAATGACTTTGGGCTCAATTACTCAAAGACAACTGTCTTTTGGTGCTCGACAAATTGGTCTACAAGTAAGAGCAGCTCTGACCGCCTTAATCTACAAGAAGTGCATCTCGATTAAGTACTCTGGTCCAAGCAATGGTAAAATTGTAAACTTAATCAACATGGATGTAGAAGTGGTTGGAGAATTCTTCTCTTCTATTCATGGAGTTTGGGTGCTTCCCCTTAAAGTGTTTTTGGCATTGGTTATCTTGTATGGAAATCTCGGTGCTGCCCCTTCTCTGGCTGCCTTTCTGACCACAGTAGCAGTAGTGGTATGCAACACACCATTGGCTCGAAGGCAACAAAATCTCCAATCAAAAATCATGGAAGCAAAGGATTCAAGAATTAAGAGAACCTCAGAGACTCTAAATAGCATGAGAGTTGTAAAATTCAATTCATGGGAAAATAGTTTCTTAGAGAAGCTACTTCAACTCAGAGAAACTGAGAAAAGTTGGTTAAAAAGATTTTTGTACTCCAAGGCAGCAGTGGTATTTCTCTTCTGGGCTTCACCAACTATAGTTTCAGTGATTACTTTTGGTATTTGCATTATGATGAGAACATCATTAGAACCATATACTGTCTTGTCAGCTTTAGCCACTTTCAGAATCCTTACCGAGCCTATTTACAACCTTCCAGAATTTATCTCGACGATTATTCAAACAAAGGTTTCGATTAAGCGAATTCAAGACTTCATCAGAATAGAAAAACAAGTGGAGCTGAATATTCCTCGTGATTATTCTTGCAGTACATCATCCACTTCAGAAATCATGGTTGAAATGGAGGCCGGTGAGTTTTCTTGGAAGGCAAGCAACGAACATATAAAGAGACCTACTATCACAATTAGAGAAAAAATAACTATGAGAAAGGGATGCAAGGTGGGAGTTTGCGGTTCTGTTGGCTCAGGCAAGTCTAGCCTACTATGCAGTATACTTGGTGAGATTCCAAAAATTTCTGGGCAAGCAACCAAGTGTTATGGAAAAAAATCTTATGTCGCACAAAGTCCATGGATCCAAACTGGAACCATAAGGGACAACATCTTGTTTGGTAAGGAGGTGAATGAGGGTTTCTATAAGAACATTGTGGAATGTTGTGCTATGAACAAGGATTTCAAGATGTGGTCTAACGGAGATATGACAGTCGTGGGGGAAAGAGGAATAAGTCTAAGTGGAGGCCAAAAACAAAGGATTCAACTCGCAAGAGCTGTCTACAATGATGCTGATGTATATATCTTGGACGACCCTTTCAGTGCTGTAGATGCACATACAGGAACACATTTGTTCACGAGATGTATCTTGCGAGAATTGTCTGAAAAAACCGTTATCTATGCTACTCACCAACTAGAATTTTTGGAAGCAGCAGACTATATTTTGGTAGTTAAAGATGGTCAAATTGCTCAGTCTGGCACTTACGAGAAGTTGATTGAAGATCCTAATGGTGAACTTGTCAGACAAATGACTGCACATAGAAAATCTCTACACCACGTTCACAGCAGTCCACCGAATTCTTTGAGCAACACCACAACTACTGGCCCCATGAAAAATGGAATTACTGAAAGAGTATTAGATACTGAAGAAACGGAAAGAGCCTCAACCAATGACCAGACTACTGTCAAAGAGATCCGAGAAGAAGAAGAAGAAGCTCAGACTGGTCGCGTAAAATGGAGTGTATATTCTACATTTATGACTTGTGCTTTAAGAGGTCTACTTCCAGTGATCCTTCTCTGTCACGTCCTCTTCCAAGTGCTCCAGATGGCAAGCAACTACTGGATTGCTTGGGCAGTAAGGAAGGAAAACACTGTCACCAGAGGAAACATGATCTGGATTTTCGCTTGTTTATCTGGCGGAAGCTCTGTCTTCGTCTTGGGAAGGGCGGTTTTCCTTTCAGTTGTCACTATTGAAACTTCCCAGCATCTCTTTGTTGGGATGATTACTTCAGTTTTCCGAGCGCCTATGGCATTTTTCGACTCTACACCATCTAGTCAAATCCTCACTAGGTCTTCAACAGATCAAAGCACAGTCGACACAGATATTACATTCAGGTTAGGGGGGCTGGTATTTGCACTCATTCAACTAGCATGCACTATCATCCTTATGTGTCTCGTGGCTTGGCAAGTCTTCATACTTTTCCTTGTCGTCATTGCAATTTCCTTTTGGTACATGAAGTACTATATTACCACTGCTAGAGAACTGGCCAGAATGGTTGCAACTCAAAAGGCTCCAATACTGCATCATTTTTCAGAATCAATTGCAGGAGCTACAACGATTCGTTGTTTCAATCAACAAAATCGCTTCTTGACAGAAGCAATGAATGAAATTGATGACTTTTCTCGAGTAGCTCTTCATAACAATGCAACAATGGAATGGCTAACTGTGAGAATAAATTTTCTCTTCAATGTTGCTTTCCTTGTAGTGCTTATTGTCTTGGTAAACCTGCCTAAGTCTGTCATTGACCCCAGTTTGGCAGGAGTGGCTGCATCATATGGTTTAGACCTTAGTGTCCTGCAGGGTTGGGTGATTTGGAATCTATGCAATGTTGAAAACAAAATGATATCTGTTCAGAGAATTCTTCAATTCAGTGGAATACAAAGTGAGGCACCACTTGTGATCGAAGCTTCTAGGCCAAACTCTGAATGGCCAACTGAAGGACAAATTGAATTTCAAAACGTGCAAGTTCAATATGAGCCTGAGGGTCCAATGGTATTGAAAGGCATCTCTTGCACATTCTCTAAAAGGATGAAAATTGGAGTGGTGGGAAGAACAGGAAGTGGAAAGTCCACTATGATCCAAGCCTTGTTTAGAGTTGTTGAGCTCTCAGGAGGGAAAATTCTCATTGATGAACAAGACATTTCTAAAATAGGCCTGCAGGATTTAAGGTCAATTTTAGGCATAATTCCACAAGACCCAACTTTATTTCAAGGAAGCTTGAGGACTAATCTTGATCCTCTGCAGCAGCATTCTGATCCAGAAATGTTAGAGGTTGTGAAGAAATGTCGACTTGGGAACTTAGTGAGGCCAGACCAAATGTTCCTGGATGCGCCTGTTTCTGAAGATGGAGAAAACTGGAGCGTCGGACAGAGGCAGCTTATTTGTCTAGCCAGAGTGCTTCTAAAGAAGAGGAAAATTCTAGTGCTAGATGAGGCTACAGCATCTATAGATACAGCAACCGATAATGCAATTCAAGAGACAATAAGAAAAGAGACAAGTGAATGCACAGTTATCACCGTGGCTCACCGGATTCCTACTGTTATGGACAGTGACATGGTTCTAGTTCTTGATGAAGGTAGGATTGTGGAGTATGACTCTCCTGCTCGGCTGATTAAGGAAAGCTCTTCTGCATTTTCGAAGTTGGTTGCAGAATTCTTGAGGAGATCTTCCAGGAGAGAGAACAACTGCTCATCTTGA

Protein Analysis

1459

Amino Acids

163.92

Weight (kDa)

8.7

Isoelectric Point (pI)

40.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 274 - 533 1.6e-19 ABC transporter transmembrane region
ABC_tran PF00005 611 - 741 1.2e-15 ABC transporter
ABC_membrane PF00664 899 - 1134 2.5e-29 ABC transporter transmembrane region
ABC_tran PF00005 1227 - 1375 4.4e-25 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 999, 3473
Acc36I ACCTGC 1 cut(s) 3417
AccB1I GGYRCC 1 cut(s) 3571
AccB7I CCANNNNNTGG 2 cut(s) 664, 1076
AccI GTMKAC 6 cut(s) 1003, 1906, 2184, 2680, 2997, 3970
AccII CGCG 1 cut(s) 2631
AciI CCGC 5 cut(s) 225, 1026, 1866, 2820, 2849
AclWI GGATC 8 cut(s) 1981, 1994, 2399, 2590, 2686, 3754, 3911, 3932
AcoI YGGCCR 2 cut(s) 3168, 3611
AcuI CTGAAG 6 cut(s) 681, 1722, 2568, 2895, 3639, 4044
AfaI GTAC 5 cut(s) 1061, 1451, 1726, 3134, 3143
AfiI CCNNNNNNNGG 7 cut(s) 664, 774, 842, 1076, 1219, 3436, 3620
AflIII ACRYGT 1 cut(s) 903
AhlI ACTAGT 1 cut(s) 553
AjiI CACGTC 2 cut(s) 54, 2707
AjnI CCWGG 2 cut(s) 4005, 4352
AjuI GAANNNNNNNTTGG 2 cut(s) 1483, 1515
Alw21I GWGCWC 4 cut(s) 327, 991, 2724, 3789
Alw26I GTCTC 7 cut(s) 104, 117, 1334, 1798, 3080, 4154, 4169
AlwI GGATC 8 cut(s) 1981, 1994, 2399, 2590, 2686, 3754, 3911, 3932
Ama87I CYCGRG 1 cut(s) 3306
AoxI GGCC 9 cut(s) 335, 1761, 2149, 2506, 3168, 3596, 3611, 3835, 3989
ArsI GACNNNNNNTTYG 2 cut(s) 43, 75
AspLEI GCGC 2 cut(s) 2926, 4015
AspS9I GGNCC 5 cut(s) 343, 845, 1067, 2507, 3668
AsuII TTCGAA 1 cut(s) 4319
AvaI CYCGRG 1 cut(s) 3306
AvaII GGWCC 4 cut(s) 343, 845, 1067, 3668
AxyI CCTNAGG 1 cut(s) 3663
BalI TGGCCA 2 cut(s) 3170, 3613
BamHI GGATCC 1 cut(s) 1986
BanI GGYRCC 1 cut(s) 3571
BanII GRGCYC 2 cut(s) 959, 3789
BauI CACGAG 3 cut(s) 1707, 2260, 3077
BbsI GAAGAC 3 cut(s) 2824, 2967, 3085
Bbv12I GWGCWC 4 cut(s) 327, 991, 2724, 3789
BccI CCATC 7 cut(s) 89, 691, 777, 2354, 2722, 2959, 4022
BciT130I CCWGG 2 cut(s) 4007, 4354
BcoDI GTCTC 7 cut(s) 104, 117, 1334, 1798, 3080, 4154, 4169
BcuI ACTAGT 1 cut(s) 553
BfmI CTRYAG 7 cut(s) 1494, 2229, 3479, 3839, 3923, 4119, 4128
BfoI RGCGCY 1 cut(s) 2927
BfuAI ACCTGC 1 cut(s) 3417
BglII AGATCT 2 cut(s) 6, 4346
BmcAI AGTACT 2 cut(s) 1061, 3143
Bme1390I CCNGG 2 cut(s) 4007, 4354
Bme18I GGWCC 4 cut(s) 343, 845, 1067, 3668
BmeT110I CYCGRG 1 cut(s) 3306
BmgBI CACGTC 2 cut(s) 54, 2707
BmgT120I GGNCC 5 cut(s) 343, 845, 1067, 2507, 3668
BmiI GGNNCC 8 cut(s) 344, 847, 1988, 1999, 2509, 3195, 3573, 3669
BmrFI CCNGG 2 cut(s) 4007, 4354
BmrI ACTGGG 1 cut(s) 3426
BmuI ACTGGG 1 cut(s) 3426
BoxI GACNNNNGTC 2 cut(s) 976, 2585
BpiI GAAGAC 3 cut(s) 2824, 2967, 3085
BplI GAGNNNNNCTC 2 cut(s) 4262, 4294
BpmI CTGGAG 2 cut(s) 2708, 4060
Bpu10I CCTNAGC 1 cut(s) 1879
Bpu14I TTCGAA 1 cut(s) 4319
BpuEI CTTGAG 2 cut(s) 3922, 4360
BsaBI GATNNNNATC 1 cut(s) 787
BsaI GGTCTC 1 cut(s) 1798
BsaJI CCNNGG 4 cut(s) 338, 1455, 1982, 4200
BsaWI WCCGGW 1 cut(s) 4209
BsaXI ACNNNNNCTCC 6 cut(s) 810, 840, 1137, 1167, 1272, 1302
Bsc4I CCNNNNNNNGG 7 cut(s) 664, 774, 842, 1076, 1219, 3436, 3620
Bse118I RCCGGY 1 cut(s) 1763
Bse1I ACTGG 9 cut(s) 847, 1999, 2509, 2629, 2687, 2747, 3171, 3432, 4043
Bse21I CCTNAGG 1 cut(s) 3663
Bse3DI GCAATG 5 cut(s) 951, 1081, 3114, 3288, 3514
Bse8I GATNNNNATC 1 cut(s) 787
BseBI CCWGG 2 cut(s) 4007, 4354
BseDI CCNNGG 4 cut(s) 338, 1455, 1982, 4200
BseJI GATNNNNATC 1 cut(s) 787
BseLI CCNNNNNNNGG 7 cut(s) 664, 774, 842, 1076, 1219, 3436, 3620
BseMI GCAATG 5 cut(s) 951, 1081, 3114, 3288, 3514
BseNI ACTGG 9 cut(s) 847, 1999, 2509, 2629, 2687, 2747, 3171, 3432, 4043
BseRI GAGGAG 2 cut(s) 575, 4357
BseYI CCCAGC 2 cut(s) 596, 2883
BsgI GTGCAG 1 cut(s) 2421
Bsh1236I CGCG 1 cut(s) 2631
BshFI GGCC 9 cut(s) 337, 1763, 2151, 2508, 3170, 3598, 3613, 3837, 3991
BshNI GGYRCC 1 cut(s) 3571
BsiHKAI GWGCWC 4 cut(s) 327, 991, 2724, 3789
BsiHKCI CYCGRG 1 cut(s) 3306
BsiSI CCGG 3 cut(s) 437, 1764, 4210
BslFI GGGAC 2 cut(s) 831, 2021
BslI CCNNNNNNNGG 7 cut(s) 664, 774, 842, 1076, 1219, 3436, 3620
BsmAI GTCTC 7 cut(s) 104, 117, 1334, 1798, 3080, 4154, 4169
BsmFI GGGAC 2 cut(s) 831, 2021
BsmI GAATGC 3 cut(s) 926, 3931, 4190
BsnI GGCC 9 cut(s) 337, 1763, 2151, 2508, 3170, 3598, 3613, 3837, 3991
Bso31I GGTCTC 1 cut(s) 1798
BsoBI CYCGRG 1 cut(s) 3306
Bsp119I TTCGAA 1 cut(s) 4319
Bsp1286I GDGCHC 5 cut(s) 327, 959, 991, 2724, 3789
Bsp19I CCATGG 1 cut(s) 1982
BspACI CCGC 5 cut(s) 225, 1026, 1866, 2820, 2849
BspANI GGCC 9 cut(s) 337, 1763, 2151, 2508, 3170, 3598, 3613, 3837, 3991
BspFNI CGCG 1 cut(s) 2631
BspLI GGNNCC 8 cut(s) 344, 847, 1988, 1999, 2509, 3195, 3573, 3669
BspMAI CTGCAG 3 cut(s) 3483, 3843, 3927
BspMI ACCTGC 1 cut(s) 3417
BspPI GGATC 8 cut(s) 1981, 1994, 2399, 2590, 2686, 3754, 3911, 3932
BspQI GCTCTTC 2 cut(s) 3321, 4312
BspT104I TTCGAA 1 cut(s) 4319
BspT107I GGYRCC 1 cut(s) 3571
BspTNI GGTCTC 1 cut(s) 1798
BsrDI GCAATG 5 cut(s) 951, 1081, 3114, 3288, 3514
BsrFI RCCGGY 1 cut(s) 1763
BsrI ACTGG 9 cut(s) 847, 1999, 2509, 2629, 2687, 2747, 3171, 3432, 4043
BssAI RCCGGY 1 cut(s) 1763
BssECI CCNNGG 4 cut(s) 338, 1455, 1982, 4200
BssNAI GTATAC 1 cut(s) 1907
BssSI CACGAG 3 cut(s) 1707, 2260, 3077
BssT1I CCWWGG 3 cut(s) 338, 1455, 1982
Bst1107I GTATAC 1 cut(s) 1907
Bst2BI CACGAG 3 cut(s) 1707, 2260, 3077
Bst2UI CCWGG 2 cut(s) 4007, 4354
Bst6I CTCTTC 9 cut(s) 85, 757, 1138, 1481, 2717, 3321, 3371, 4085, 4312
BstAPI GCANNNNNTGC 1 cut(s) 3693
BstBI TTCGAA 1 cut(s) 4319
BstC8I GCNNGC 7 cut(s) 133, 924, 1786, 1938, 2734, 3055, 3839
BstDSI CCRYGG 2 cut(s) 1982, 4200
BstFNI CGCG 1 cut(s) 2631
BstH2I RGCGCY 1 cut(s) 2927
BstHHI GCGC 2 cut(s) 2926, 4015
BstMAI GTCTC 7 cut(s) 104, 117, 1334, 1798, 3080, 4154, 4169
BstMWI GCNNNNNNNGC 9 cut(s) 713, 803, 1025, 1890, 1899, 2234, 2930, 3446, 3693
BstNI CCWGG 2 cut(s) 4007, 4354
BstNSI RCATGY 2 cut(s) 907, 3057
BstPAI GACNNNNGTC 2 cut(s) 976, 2585
BstSCI CCNGG 2 cut(s) 4005, 4352
BstSFI CTRYAG 7 cut(s) 1494, 2229, 3479, 3839, 3923, 4119, 4128
BstUI CGCG 1 cut(s) 2631
BstV2I GAAGAC 3 cut(s) 2824, 2967, 3085
BstX2I RGATCY 5 cut(s) 6, 1986, 2404, 2595, 4346
BstYI RGATCY 5 cut(s) 6, 1986, 2404, 2595, 4346
BstZ17I GTATAC 1 cut(s) 1907
Bsu36I CCTNAGG 1 cut(s) 3663
BsuRI GGCC 9 cut(s) 337, 1763, 2151, 2508, 3170, 3598, 3613, 3837, 3991
BtgI CCRYGG 2 cut(s) 1982, 4200
BtrI CACGTC 2 cut(s) 54, 2707
BtsI GCAGTG 2 cut(s) 1470, 3153
BveI ACCTGC 1 cut(s) 3417
Cac8I GCNNGC 7 cut(s) 133, 924, 1786, 1938, 2734, 3055, 3839
CfoI GCGC 2 cut(s) 2926, 4015
Cfr10I RCCGGY 1 cut(s) 1763
Cfr13I GGNCC 5 cut(s) 343, 845, 1067, 2507, 3668
CseI GACGC 1 cut(s) 4033
Csp6I GTAC 5 cut(s) 1060, 1450, 1725, 3133, 3142
CviQI GTAC 5 cut(s) 1060, 1450, 1725, 3133, 3142
DrdI GACNNNNNNGTC 2 cut(s) 999, 3473
DseDI GACNNNNNNGTC 2 cut(s) 999, 3473
EaeI YGGCCR 2 cut(s) 3168, 3611
Eam1104I CTCTTC 9 cut(s) 85, 757, 1138, 1481, 2717, 3321, 3371, 4085, 4312
EarI CTCTTC 9 cut(s) 85, 757, 1138, 1481, 2717, 3321, 3371, 4085, 4312
EciI GGCGGA 1 cut(s) 2835
Ecl136II GAGCTC 1 cut(s) 3787
Eco130I CCWWGG 3 cut(s) 338, 1455, 1982
Eco147I AGGCCT 1 cut(s) 3837
Eco24I GRGCYC 2 cut(s) 959, 3789
Eco31I GGTCTC 1 cut(s) 1798
Eco32I GATATC 1 cut(s) 3528
Eco47I GGWCC 4 cut(s) 343, 845, 1067, 3668
Eco53kI GAGCTC 1 cut(s) 3787
Eco57I CTGAAG 6 cut(s) 681, 1722, 2568, 2895, 3639, 4044
Eco81I CCTNAGG 1 cut(s) 3663
Eco88I CYCGRG 1 cut(s) 3306
EcoICRI GAGCTC 1 cut(s) 3787
EcoO109I RGGNCCY 1 cut(s) 343
EcoRI GAATTC 6 cut(s) 467, 1124, 1659, 2479, 3540, 4334
EcoRII CCWGG 2 cut(s) 4005, 4352
EcoRV GATATC 1 cut(s) 3528
EcoT14I CCWWGG 3 cut(s) 338, 1455, 1982
EcoT38I GRGCYC 2 cut(s) 959, 3789
ErhI CCWWGG 3 cut(s) 338, 1455, 1982
FalI AAGNNNNNCTT 2 cut(s) 322, 354
FaqI GGGAC 2 cut(s) 831, 2021
FauNDI CATATG 1 cut(s) 3457
FblI GTMKAC 6 cut(s) 1003, 1906, 2184, 2680, 2997, 3970
FriOI GRGCYC 2 cut(s) 959, 3789
GlaI GCGC 2 cut(s) 2925, 4014
GsaI CCCAGC 2 cut(s) 600, 2887
GsuI CTGGAG 2 cut(s) 2708, 4060
HaeII RGCGCY 1 cut(s) 2927
HaeIII GGCC 9 cut(s) 337, 1763, 2151, 2508, 3170, 3598, 3613, 3837, 3991
HapII CCGG 3 cut(s) 437, 1764, 4210
HgaI GACGC 1 cut(s) 4033
HhaI GCGC 2 cut(s) 2926, 4015
Hin6I GCGC 2 cut(s) 2924, 4013
HinP1I GCGC 2 cut(s) 2924, 4013
HincII GTYRAC 2 cut(s) 2998, 3971
HindII GTYRAC 2 cut(s) 2998, 3971
HindIII AAGCTT 3 cut(s) 920, 3588, 3898
HpaII CCGG 3 cut(s) 437, 1764, 4210
Hpy99I CGWCG 2 cut(s) 1630, 4049
HpyCH4IV ACGT 4 cut(s) 53, 2460, 2706, 3642
HpyF10VI GCNNNNNNNGC 9 cut(s) 713, 803, 1025, 1890, 1899, 2234, 2930, 3446, 3693
HpySE526I ACGT 4 cut(s) 53, 2460, 2706, 3642
HspAI GCGC 2 cut(s) 2924, 4013
LguI GCTCTTC 2 cut(s) 3321, 4312
LmnI GCTCC 8 cut(s) 606, 732, 744, 1693, 2727, 3199, 3230, 4041
MaeII ACGT 4 cut(s) 53, 2460, 2706, 3642
MfeI CAATTG 1 cut(s) 3222
MflI RGATCY 5 cut(s) 6, 1986, 2404, 2595, 4346
MhlI GDGCHC 5 cut(s) 327, 959, 991, 2724, 3789
MlsI TGGCCA 2 cut(s) 3170, 3613
MluNI TGGCCA 2 cut(s) 3170, 3613
MlyI GAGTC 4 cut(s) 828, 1336, 2936, 4271
MmeI TCCRAC 5 cut(s) 645, 766, 862, 1099, 4027
Mox20I TGGCCA 2 cut(s) 3170, 3613
MscI TGGCCA 2 cut(s) 3170, 3613
MslI CAYNNNNRTG 4 cut(s) 622, 1529, 3068, 3324
Msp20I TGGCCA 2 cut(s) 3170, 3613
MspI CCGG 3 cut(s) 437, 1764, 4210
MspR9I CCNGG 2 cut(s) 4007, 4354
MunI CAATTG 1 cut(s) 3222
Mva1269I GAATGC 3 cut(s) 926, 3931, 4190
MvaI CCWGG 2 cut(s) 4007, 4354
MvnI CGCG 1 cut(s) 2631
MwoI GCNNNNNNNGC 9 cut(s) 713, 803, 1025, 1890, 1899, 2234, 2930, 3446, 3693
NcoI CCATGG 1 cut(s) 1982
NdeI CATATG 1 cut(s) 3457
NlaIV GGNNCC 8 cut(s) 344, 847, 1988, 1999, 2509, 3195, 3573, 3669
NmeAIII GCCGAG 2 cut(s) 733, 4267
NmuCI GTSAC 7 cut(s) 289, 406, 613, 2702, 2776, 2866, 4232
NspI RCATGY 2 cut(s) 907, 3057
NspV TTCGAA 1 cut(s) 4319
PaeI GCATGC 1 cut(s) 3057
PaeR7I CTCGAG 1 cut(s) 3306
PceI AGGCCT 1 cut(s) 3837
PciI ACATGT 1 cut(s) 903
PciSI GCTCTTC 2 cut(s) 3321, 4312
PctI GAATGC 3 cut(s) 926, 3931, 4190
PfeI GAWTC 9 cut(s) 734, 1316, 1584, 1918, 2164, 3218, 3241, 3499, 4213
PflMI CCANNNNNTGG 2 cut(s) 664, 1076
PfoI TCCNGGA 2 cut(s) 4005, 4352
PleI GAGTC 4 cut(s) 827, 1336, 2936, 4271
PpsI GAGTC 4 cut(s) 827, 1336, 2936, 4271
PpuMI RGGWCCY 1 cut(s) 343
PscI ACATGT 1 cut(s) 903
PshAI GACNNNNGTC 2 cut(s) 976, 2585
Psp124BI GAGCTC 1 cut(s) 3789
Psp5II RGGWCCY 1 cut(s) 343
Psp6I CCWGG 2 cut(s) 4005, 4352
PspFI CCCAGC 2 cut(s) 596, 2883
PspGI CCWGG 2 cut(s) 4005, 4352
PspN4I GGNNCC 8 cut(s) 344, 847, 1988, 1999, 2509, 3195, 3573, 3669
PspPI GGNCC 5 cut(s) 343, 845, 1067, 2507, 3668
PspPPI RGGWCCY 1 cut(s) 343
PstI CTGCAG 3 cut(s) 3483, 3843, 3927
PsuI RGATCY 5 cut(s) 6, 1986, 2404, 2595, 4346
RsaI GTAC 5 cut(s) 1061, 1451, 1726, 3134, 3143
RsaNI GTAC 5 cut(s) 1060, 1450, 1725, 3133, 3142
RseI CAYNNNNRTG 4 cut(s) 622, 1529, 3068, 3324
SacI GAGCTC 1 cut(s) 3789
SalI GTCGAC 2 cut(s) 2996, 3969
SapI GCTCTTC 2 cut(s) 3321, 4312
Sau96I GGNCC 5 cut(s) 343, 845, 1067, 2507, 3668
SbfI CCTGCAGG 2 cut(s) 3483, 3843
ScaI AGTACT 2 cut(s) 1061, 3143
SchI GAGTC 4 cut(s) 828, 1336, 2936, 4271
ScrFI CCNGG 2 cut(s) 4007, 4354
SdaI CCTGCAGG 2 cut(s) 3483, 3843
SduI GDGCHC 5 cut(s) 327, 959, 991, 2724, 3789
SfcI CTRYAG 7 cut(s) 1494, 2229, 3479, 3839, 3923, 4119, 4128
Sfr274I CTCGAG 1 cut(s) 3306
SfuI TTCGAA 1 cut(s) 4319
SinI GGWCC 4 cut(s) 343, 845, 1067, 3668
SlaI CTCGAG 1 cut(s) 3306
SmiMI CAYNNNNRTG 4 cut(s) 622, 1529, 3068, 3324
SmlI CTYRAG 3 cut(s) 3306, 3901, 4339
SmoI CTYRAG 3 cut(s) 3306, 3901, 4339
SpeI ACTAGT 1 cut(s) 553
SphI GCATGC 1 cut(s) 3057
Sse8387I CCTGCAGG 2 cut(s) 3483, 3843
SseBI AGGCCT 1 cut(s) 3837
SsiI CCGC 5 cut(s) 225, 1026, 1866, 2820, 2849
SspI AATATT 1 cut(s) 1702
SstI GAGCTC 1 cut(s) 3789
StuI AGGCCT 1 cut(s) 3837
StyD4I CCNGG 2 cut(s) 4005, 4352
StyI CCWWGG 3 cut(s) 338, 1455, 1982
TaiI ACGT 4 cut(s) 56, 2463, 2709, 3645
TatI WGTACW 4 cut(s) 1059, 1449, 1724, 3141
TfiI GAWTC 9 cut(s) 734, 1316, 1584, 1918, 2164, 3218, 3241, 3499, 4213
TseFI GTSAC 7 cut(s) 289, 406, 613, 2702, 2776, 2866, 4232
Tsp45I GTSAC 7 cut(s) 289, 406, 613, 2702, 2776, 2866, 4232
TspGWI ACGGA 2 cut(s) 2118, 2570
Van91I CCANNNNNTGG 2 cut(s) 664, 1076
VpaK11BI GGWCC 4 cut(s) 343, 845, 1067, 3668
XceI RCATGY 2 cut(s) 907, 3057
XcmI CCANNNNNNNNNTGG 2 cut(s) 1462, 3606
XhoI CTCGAG 1 cut(s) 3306
XmiI GTMKAC 6 cut(s) 1003, 1906, 2184, 2680, 2997, 3970
ZrmI AGTACT 2 cut(s) 1061, 3143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.