Rw5G016080

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
20098373 .. 20107280
8908 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G016080.1

Sequence Viewer

Length: 2901 bp
ATGAAACAGCTGATGATGCAAGAAAGGCTTCATTCCAAGATGATGGAGGCGAAGGATTCACGAATTAAAGTAACATCAGAGACTCTCAAAAGCATGCGAGTTTTGAAGCTGCATTCTTGGGAATCCACATTCTTGAAGAAGCTGCTTCAGCTGAGGGAAACTGAGAGGAGTTGGCTGAAGAGATACCTCTATACATGCTCACTAGTGGCTTTTCTCTTCTGGGCTTCACCTACTCTGGTTTCAGTTGCCACTTTTGGTGTATGCATTATACTCGATACACCATTAAACACAGGAACTGTCTTGTTTGCTTTGGCTACTTTTAGAATTCTTCAAGAGCCCATCTACAACCTCCCAGAGCTCATTTCCATGATTGCTCAAACAAAGGTATCAGTTGATCGTATCAAAGAATTCATCAAAGAAGATCAATTGAAGCTAATTCCTGGTTATACTTCAAAAGAATCCAACGTCATGATTGTAATTGAGACAGGAGAATATGCATGGAAAACAAGCGATCAGAACTTAAAGAAGCCTACAATCAAAATTGTGGAGAAGATAGAGATAATGAAAGGATACAAGGTAGCAATTTGCGGTTCTGTTGGTTCGGGCAAGTCAAGCTTACTAAGTAGTATACTTGGGGAGATTCCCAAAATTTCTGGGGCAGGAGCGAGGGTTTATGGGACAAAAGCTTATGTTCCACAAAGTTCTTGGATTCAAACTGGAACTGTAAGGGAGAATGTGTTGTTTGGCAAGGAGATGATTGAGGGTTATTATGAGAATGTTTTGGAGGTTTGTGCTTTGGACCAGGATGTCAAAATGTGGGAAGATGGAGATTTGACTATAGTGGGGGAGAGAGGGATGAACCTAAGTGGGGGACAAAAACAAAGGATTCAACTGGCAAGAGCAGTCTATAGTGATTCCGATGTATATATCTTGGATGATCCTTTTAGTGCTGTTGATGCACATACAGGAACACACTTGTTCAAGAAATGTCTCTTGCAACACTTGTCTCTAAAGACTCTCATCTATGCTACCCACCAATTAGAATTTCTAGAAGCAGCAGACCTTGTCTTGGTAATTAAAGGTGGTCAGATTGCTCAGTCTGGAAAATATGAAGATTTGATTGCCGACCTCAATGGTGAACTTGTCAGACAAATGGCTGCACATAGGAAATCGTTAGACCAAGTTAACAGATGCCAAATAGATGTTTCCTTAAAGAGTAGACCTCATCAAGTTAATCTAATAGAGGTTGTGGAAGAGAAAGAGCCTTTCAACAATGGCAAGCTTCCGGAAAAGAGTCACGAAGAAGAAGCAGAAACTGGTCCAGTGAAATTGAGTGTTTATTCCACCTTTGTAACTTCTGCTTATGGAGGTGCTCTTGTCCCAGTTATCCTTCTCTGCCAAGTCCTCTTCCAGGGGCTGCAAATGGGCAGCAACTACTGGATGGCTTGGGGAACAGAGAAGGAAGGTAGGGTCAGTAGAGAGCGATTGATATGGGTATTTATTATGTTGTCTGGAAGGAGCTCCATCTTCATATTGGGAAGGGCATCTTCCACGGATCAAAGCACTGTAGACATGGACATTCCTTATAGATTAGCTGGATTAGCATTTGCACTGATCCAACTAATAAGCATCATAGTCCTTATGTCTCAAGTGGCTTGGCAAGTTTTCCTTCTTTTCCTCGGGGTTCTTGGACTCTCCATATGGTATCAAGTCTATTACATTACCACAGCTAGAGAACTTGCGAGGATGGTTGGAATTCGAAAGGCTCCAATCCTCCATCACTTCTCAGAATCAATCACAGGGGCTGCAACAATTCGTTGTTTCAACCAAGAAAACCGCTTCTTGATGAAGATAATGAACCTCATTGACGATTATTCTCGTGTAGCCTTTCACAATTATGCCACAATGGAATGGTTATCGGTCCGAATCAATTTTCTGTTCAACCTTGTATTCTTCCTTGTTCTTGTCATTTTAGTGAGCTTGCCAAGGTCTGCCATTAACCCTAGTTTGGCAGGACTGGCAGCTACCTATGGTTTGAACCTCAATGTTCTCCAGGCTTGGGTGATATGGAATTTGTGTAATGTGGAAAACAAAATGATATCAGTGGAGAGGATCCTTCAATTCACAAATATTCCAAGTGAGGCACCACTAGTCATTGAAGATTGTAGACCAAACCCTGAATGGCCAACATATGATCCGGCTCTTCCAATGGTTCTCAAAGGGATCAGTTGCACCTTCCCTGGACAAAAGAAAATTGGAGTTGTGGGCAGGACGGGGAGTGGAAAATCTACCTTGATCCAAGCTCTTTTTAGAGTAGTACATGCTGTTGATATTTCTAAAATAGGTCTGCAAGACTTGAGATCAAGGTTGGGAATAATTCCACAAGACCCAACATTATTTCAAGGAACCATGAGGACTAATCTGGATCCTCTGCAACAGCATTCAGATCAAGAAATCTGGGAGGTTCTCAATCAGTGTCGACTTGCAGAGATAGTTAGGCAAGACCAAAGGCTTCTTGATGCACCTGTATTTGCTGAAGATGGAGAAAATTGGAGTGTGGGACAGAGGCAGCTTGTGTGCCTGGCACGTGTACTCCTAAAGAAAAGGAGGATTCTGGTGTTGGATGAGGCTACAGCTTCTATTGATACCGCCACAGATGTTGTAATTCAGGAGACTATAAGGAGAGAAACAAGTGGATGCACTGTCATTATTGTGGCTCATCGAATTCCTACTGTTATTGACAATGACTTGGTTCTAGTCCTTGATGAAGGTAAATATGACTCACGCCAACATGACTCTCCAGCTCGGTTACTTGAGGATAATTCTTCTGCATTCTCCAAGTTGGTGGCAGAATACTCGAGGAGATCTTCCATAAGCAACTGCTTTAGAGACCTATCTTGA

Protein Analysis

966

Amino Acids

108.73

Weight (kDa)

7.52

Isoelectric Point (pI)

35.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 6 - 113 1.7e-08 ABC transporter transmembrane region
ABC_tran PF00005 186 - 315 9.7e-16 ABC transporter
ABC_membrane PF00664 517 - 661 1.8e-16 ABC transporter transmembrane region
ABC_tran PF00005 739 - 879 7.1e-21 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 806
AccB1I GGYRCC 1 cut(s) 2143
AccI GTMKAC 5 cut(s) 628, 1219, 1569, 2167, 2479
AccIII TCCGGA 1 cut(s) 1285
AciI CCGC 3 cut(s) 588, 1837, 2649
AcoI YGGCCR 1 cut(s) 2183
AcsI RAATTY 7 cut(s) 324, 407, 648, 1043, 1755, 2071, 2724
AcuI CTGAAG 3 cut(s) 131, 197, 2556
AcvI CACGTG 1 cut(s) 2588
AfaI GTAC 2 cut(s) 2319, 2592
AfiI CCNNNNNNNGG 5 cut(s) 868, 1069, 1411, 2008, 2059
AflIII ACRYGT 1 cut(s) 2587
AhlI ACTAGT 2 cut(s) 202, 2149
AjnI CCWGG 6 cut(s) 439, 801, 1410, 2052, 2239, 2580
AjuI GAANNNNNNNTTGG 2 cut(s) 1029, 1061
Alw21I GWGCWC 3 cut(s) 360, 1375, 1523
Alw26I GTCTC 7 cut(s) 74, 476, 995, 1011, 1650, 2666, 2883
AlwNI CAGNNNCTG 4 cut(s) 296, 1316, 1417, 1805
Ama87I CYCGRG 2 cut(s) 1679, 2857
Aor13HI TCCGGA 1 cut(s) 1285
AoxI GGCC 1 cut(s) 2183
ApeKI GCWGC 9 cut(s) 109, 142, 1055, 1157, 1417, 1428, 1805, 2021, 2569
ApoI RAATTY 7 cut(s) 324, 407, 648, 1043, 1755, 2071, 2724
Asp700I GAANNNNTTC 1 cut(s) 27
AspS9I GGNCC 3 cut(s) 799, 1319, 1921
AsuHPI GGTGA 3 cut(s) 219, 1148, 2074
AsuII TTCGAA 1 cut(s) 1759
AvaI CYCGRG 2 cut(s) 1679, 2857
AvaII GGWCC 3 cut(s) 799, 1319, 1921
BaeI ACNNNNGTAYC 2 cut(s) 369, 402
BalI TGGCCA 1 cut(s) 2185
BamHI GGATCC 2 cut(s) 2112, 2425
BanI GGYRCC 1 cut(s) 2143
BanII GRGCYC 3 cut(s) 339, 360, 1523
BauI CACGAG 1 cut(s) 1878
BbrPI CACGTG 1 cut(s) 2588
Bbv12I GWGCWC 3 cut(s) 360, 1375, 1523
BbvCI CCTCAGC 1 cut(s) 152
BbvI GCAGC 9 cut(s) 96, 129, 1067, 1144, 1404, 1440, 1792, 2033, 2581
BccI CCATC 8 cut(s) 37, 347, 818, 1435, 1532, 1741, 1785, 2534
BcgI CGANNNNNNTGC 4 cut(s) 253, 287, 2838, 2872
BciT130I CCWGG 6 cut(s) 441, 803, 1412, 2054, 2241, 2582
BciVI GTATCC 1 cut(s) 563
BcoDI GTCTC 7 cut(s) 74, 476, 995, 1011, 1650, 2666, 2883
BcuI ACTAGT 2 cut(s) 202, 2149
BfaI CTAG 6 cut(s) 203, 1049, 1731, 2004, 2150, 2756
BfmI CTRYAG 4 cut(s) 837, 907, 1566, 2631
BfuI GTATCC 1 cut(s) 563
BglII AGATCT 1 cut(s) 2864
BisI GCNGC 9 cut(s) 110, 143, 1056, 1158, 1418, 1429, 1806, 2022, 2570
BlsI GCNGC 9 cut(s) 111, 144, 1057, 1159, 1419, 1430, 1807, 2023, 2571
Bme1390I CCNGG 6 cut(s) 441, 803, 1412, 2054, 2241, 2582
Bme18I GGWCC 3 cut(s) 799, 1319, 1921
BmeT110I CYCGRG 2 cut(s) 1679, 2857
BmgT120I GGNCC 3 cut(s) 799, 1319, 1921
BmiI GGNNCC 5 cut(s) 1767, 2114, 2145, 2407, 2427
BmrFI CCNGG 6 cut(s) 441, 803, 1412, 2054, 2241, 2582
BmrI ACTGGG 1 cut(s) 1376
BmsI GCATC 7 cut(s) 6, 946, 1181, 1553, 1638, 2509, 2687
BmuI ACTGGG 1 cut(s) 1376
BplI GAGNNNNNCTC 2 cut(s) 1207, 1239
BpmI CTGGAG 2 cut(s) 2036, 2784
Bpu10I CCTNAGC 1 cut(s) 152
Bpu14I TTCGAA 1 cut(s) 1759
BpuEI CTTGAG 3 cut(s) 1632, 2377, 2834
BsaAI YACGTR 1 cut(s) 2588
BsaI GGTCTC 1 cut(s) 2883
BsaJI CCNNGG 5 cut(s) 1411, 1551, 1678, 1985, 2239
BsaWI WCCGGW 1 cut(s) 1285
BsaXI ACNNNNNCTCC 6 cut(s) 654, 684, 722, 752, 2577, 2607
Bsc4I CCNNNNNNNGG 5 cut(s) 868, 1069, 1411, 2008, 2059
Bse1I ACTGG 7 cut(s) 721, 897, 1321, 1322, 1382, 1442, 2022
BseAI TCCGGA 1 cut(s) 1285
BseBI CCWGG 6 cut(s) 441, 803, 1412, 2054, 2241, 2582
BseDI CCNNGG 5 cut(s) 1411, 1551, 1678, 1985, 2239
BseGI GGATG 7 cut(s) 811, 861, 940, 1446, 1752, 2629, 2702
BseLI CCNNNNNNNGG 5 cut(s) 868, 1069, 1411, 2008, 2059
BseMII CTCAG 4 cut(s) 143, 153, 1109, 1800
BseNI ACTGG 7 cut(s) 721, 897, 1321, 1322, 1382, 1442, 2022
BseRI GAGGAG 2 cut(s) 181, 2875
BseXI GCAGC 9 cut(s) 96, 129, 1067, 1144, 1404, 1440, 1792, 2033, 2581
BsgI GTGCAG 1 cut(s) 1143
BshFI GGCC 1 cut(s) 2185
BshNI GGYRCC 1 cut(s) 2143
BsiHKAI GWGCWC 3 cut(s) 360, 1375, 1523
BsiHKCI CYCGRG 2 cut(s) 1679, 2857
BsiSI CCGG 2 cut(s) 1286, 2198
BslFI GGGAC 4 cut(s) 691, 885, 1364, 2574
BslI CCNNNNNNNGG 5 cut(s) 868, 1069, 1411, 2008, 2059
BsmAI GTCTC 7 cut(s) 74, 476, 995, 1011, 1650, 2666, 2883
BsmFI GGGAC 4 cut(s) 691, 885, 1364, 2574
BsmI GAATGC 3 cut(s) 112, 2440, 2831
BsnI GGCC 1 cut(s) 2185
Bso31I GGTCTC 1 cut(s) 2883
BsoBI CYCGRG 2 cut(s) 1679, 2857
Bsp119I TTCGAA 1 cut(s) 1759
Bsp1286I GDGCHC 4 cut(s) 339, 360, 1375, 1523
Bsp13I TCCGGA 1 cut(s) 1285
BspACI CCGC 3 cut(s) 588, 1837, 2649
BspANI GGCC 1 cut(s) 2185
BspCNI CTCAG 4 cut(s) 144, 154, 1108, 1799
BspEI TCCGGA 1 cut(s) 1285
BspHI TCATGA 1 cut(s) 468
BspLI GGNNCC 5 cut(s) 1767, 2114, 2145, 2407, 2427
BspQI GCTCTTC 1 cut(s) 2208
BspT104I TTCGAA 1 cut(s) 1759
BspT107I GGYRCC 1 cut(s) 2143
BspTNI GGTCTC 1 cut(s) 2883
BsrI ACTGG 7 cut(s) 721, 897, 1321, 1322, 1382, 1442, 2022
BssECI CCNNGG 5 cut(s) 1411, 1551, 1678, 1985, 2239
BssNAI GTATAC 1 cut(s) 629
BssSI CACGAG 1 cut(s) 1878
BssT1I CCWWGG 1 cut(s) 1985
Bst1107I GTATAC 1 cut(s) 629
Bst2BI CACGAG 1 cut(s) 1878
Bst2UI CCWGG 6 cut(s) 441, 803, 1412, 2054, 2241, 2582
Bst4CI ACNGT 5 cut(s) 298, 724, 1567, 2704, 2734
Bst6I CTCTTC 5 cut(s) 173, 221, 1248, 1412, 2208
BstBAI YACGTR 1 cut(s) 2588
BstBI TTCGAA 1 cut(s) 1759
BstC8I GCNNGC 3 cut(s) 95, 1280, 1982
BstDEI CTNAG 6 cut(s) 152, 162, 620, 863, 1095, 1786
BstDSI CCRYGG 1 cut(s) 1551
BstENI CCTNNNNNAGG 1 cut(s) 1409
BstF5I GGATG 7 cut(s) 811, 861, 940, 1446, 1752, 2629, 2702
BstMAI GTCTC 7 cut(s) 74, 476, 995, 1011, 1650, 2666, 2883
BstMWI GCNNNNNNNGC 7 cut(s) 16, 25, 148, 612, 956, 1601, 2018
BstNI CCWGG 6 cut(s) 441, 803, 1412, 2054, 2241, 2582
BstNSI RCATGY 3 cut(s) 97, 198, 2324
BstSCI CCNGG 6 cut(s) 439, 801, 1410, 2052, 2239, 2580
BstSFI CTRYAG 4 cut(s) 837, 907, 1566, 2631
BstV1I GCAGC 9 cut(s) 96, 129, 1067, 1144, 1404, 1440, 1792, 2033, 2581
BstX2I RGATCY 3 cut(s) 2112, 2425, 2864
BstXI CCANNNNNNTGG 2 cut(s) 43, 2845
BstYI RGATCY 3 cut(s) 2112, 2425, 2864
BstZ17I GTATAC 1 cut(s) 629
BsuI GTATCC 1 cut(s) 563
BsuRI GGCC 1 cut(s) 2185
BtgI CCRYGG 1 cut(s) 1551
BtsCI GGATG 7 cut(s) 811, 861, 940, 1446, 1752, 2629, 2702
BtsIMutI CAGTG 6 cut(s) 1329, 1563, 1610, 2109, 2480, 2700
Cac8I GCNNGC 3 cut(s) 95, 1280, 1982
CaiI CAGNNNCTG 4 cut(s) 296, 1316, 1417, 1805
CciI TCATGA 1 cut(s) 468
Cfr13I GGNCC 3 cut(s) 799, 1319, 1921
CpoI CGGWCCG 1 cut(s) 1921
Csp6I GTAC 2 cut(s) 2318, 2591
CspCI CAANNNNNGTGG 2 cut(s) 2641, 2676
CspI CGGWCCG 1 cut(s) 1921
CviAII CATG 9 cut(s) 94, 195, 367, 469, 498, 1573, 2321, 2410, 2792
CviQI GTAC 2 cut(s) 2318, 2591
DdeI CTNAG 6 cut(s) 152, 162, 620, 863, 1095, 1786
DrdI GACNNNNNNGTC 1 cut(s) 806
DseDI GACNNNNNNGTC 1 cut(s) 806
EaeI YGGCCR 1 cut(s) 2183
Eam1104I CTCTTC 5 cut(s) 173, 221, 1248, 1412, 2208
EarI CTCTTC 5 cut(s) 173, 221, 1248, 1412, 2208
Ecl136II GAGCTC 2 cut(s) 358, 1521
Eco130I CCWWGG 1 cut(s) 1985
Eco24I GRGCYC 3 cut(s) 339, 360, 1523
Eco31I GGTCTC 1 cut(s) 2883
Eco32I GATATC 1 cut(s) 2100
Eco47I GGWCC 3 cut(s) 799, 1319, 1921
Eco53kI GAGCTC 2 cut(s) 358, 1521
Eco57I CTGAAG 3 cut(s) 131, 197, 2556
Eco72I CACGTG 1 cut(s) 2588
Eco88I CYCGRG 2 cut(s) 1679, 2857
EcoICRI GAGCTC 2 cut(s) 358, 1521
EcoNI CCTNNNNNAGG 1 cut(s) 1409
EcoRI GAATTC 4 cut(s) 324, 407, 1755, 2724
EcoRII CCWGG 6 cut(s) 439, 801, 1410, 2052, 2239, 2580
EcoRV GATATC 1 cut(s) 2100
EcoT14I CCWWGG 1 cut(s) 1985
EcoT22I ATGCAT 2 cut(s) 266, 499
EcoT38I GRGCYC 3 cut(s) 339, 360, 1523
ErhI CCWWGG 1 cut(s) 1985
FaeI CATG 9 cut(s) 97, 198, 370, 472, 501, 1576, 2324, 2413, 2795
FalI AAGNNNNNCTT 8 cut(s) 12, 44, 599, 631, 1531, 1563, 1653, 1685
FaqI GGGAC 4 cut(s) 691, 885, 1364, 2574
FatI CATG 9 cut(s) 93, 194, 366, 468, 497, 1572, 2320, 2409, 2791
FauNDI CATATG 2 cut(s) 1700, 2191
FblI GTMKAC 5 cut(s) 628, 1219, 1569, 2167, 2479
Fnu4HI GCNGC 9 cut(s) 110, 143, 1056, 1158, 1418, 1429, 1806, 2022, 2570
FokI GGATG 7 cut(s) 818, 868, 947, 1453, 1759, 2636, 2709
FriOI GRGCYC 3 cut(s) 339, 360, 1523
Fsp4HI GCNGC 9 cut(s) 110, 143, 1056, 1158, 1418, 1429, 1806, 2022, 2570
FspBI CTAG 6 cut(s) 203, 1049, 1731, 2004, 2150, 2756
GluI GCNGC 9 cut(s) 110, 143, 1056, 1158, 1418, 1429, 1806, 2022, 2570
GsuI CTGGAG 2 cut(s) 2036, 2784
HaeIII GGCC 1 cut(s) 2185
HapII CCGG 2 cut(s) 1286, 2198
Hin1II CATG 9 cut(s) 97, 198, 370, 472, 501, 1576, 2324, 2413, 2795
HincII GTYRAC 2 cut(s) 1186, 2480
HindII GTYRAC 2 cut(s) 1186, 2480
HindIII AAGCTT 3 cut(s) 613, 684, 1280
HpaI GTTAAC 1 cut(s) 1186
HpaII CCGG 2 cut(s) 1286, 2198
HphI GGTGA 3 cut(s) 219, 1148, 2074
Hpy166II GTNNAC 8 cut(s) 629, 1139, 1186, 1220, 1570, 2168, 2480, 2591
Hpy188I TCNGA 8 cut(s) 79, 516, 919, 1089, 1148, 1789, 1925, 2446
Hpy8I GTNNAC 8 cut(s) 629, 1139, 1186, 1220, 1570, 2168, 2480, 2591
HpyCH4III ACNGT 5 cut(s) 298, 724, 1567, 2704, 2734
HpyCH4IV ACGT 2 cut(s) 465, 2587
HpyF10VI GCNNNNNNNGC 7 cut(s) 16, 25, 148, 612, 956, 1601, 2018
HpyF3I CTNAG 6 cut(s) 152, 162, 620, 863, 1095, 1786
HpySE526I ACGT 2 cut(s) 465, 2587
Hsp92II CATG 9 cut(s) 97, 198, 370, 472, 501, 1576, 2324, 2413, 2795
Kpn2I TCCGGA 1 cut(s) 1285
KspAI GTTAAC 1 cut(s) 1186
LguI GCTCTTC 1 cut(s) 2208
LmnI GCTCC 4 cut(s) 662, 1518, 1526, 1771
Lsp1109I GCAGC 9 cut(s) 96, 129, 1067, 1144, 1404, 1440, 1792, 2033, 2581
LweI GCATC 7 cut(s) 6, 946, 1181, 1553, 1638, 2509, 2687
MaeI CTAG 6 cut(s) 203, 1049, 1731, 2004, 2150, 2756
MaeII ACGT 2 cut(s) 465, 2587
MaeIII GTNAC 4 cut(s) 70, 1295, 1351, 2808
MfeI CAATTG 1 cut(s) 425
MflI RGATCY 3 cut(s) 2112, 2425, 2864
MhlI GDGCHC 4 cut(s) 339, 360, 1375, 1523
MlsI TGGCCA 1 cut(s) 2185
MluNI TGGCCA 1 cut(s) 2185
MlyI GAGTC 6 cut(s) 76, 1009, 1303, 1686, 2774, 2789
MmeI TCCRAC 4 cut(s) 486, 1642, 1732, 2601
Mox20I TGGCCA 1 cut(s) 2185
Mph1103I ATGCAT 2 cut(s) 266, 499
MroI TCCGGA 1 cut(s) 1285
MroXI GAANNNNTTC 1 cut(s) 27
MscI TGGCCA 1 cut(s) 2185
MseI TTAA 8 cut(s) 66, 284, 521, 1077, 1185, 1211, 1233, 1998
MslI CAYNNNNRTG 4 cut(s) 365, 1896, 1973, 2711
Msp20I TGGCCA 1 cut(s) 2185
MspA1I CMGCKG 2 cut(s) 10, 151
MspI CCGG 2 cut(s) 1286, 2198
MspR9I CCNGG 6 cut(s) 441, 803, 1412, 2054, 2241, 2582
MunI CAATTG 1 cut(s) 425
Mva1269I GAATGC 3 cut(s) 112, 2440, 2831
MvaI CCWGG 6 cut(s) 441, 803, 1412, 2054, 2241, 2582
MwoI GCNNNNNNNGC 7 cut(s) 16, 25, 148, 612, 956, 1601, 2018
NdeI CATATG 2 cut(s) 1700, 2191
NlaIII CATG 9 cut(s) 97, 198, 370, 472, 501, 1576, 2324, 2413, 2795
NlaIV GGNNCC 5 cut(s) 1767, 2114, 2145, 2407, 2427
NmuCI GTSAC 1 cut(s) 1295
NsiI ATGCAT 2 cut(s) 266, 499
NspI RCATGY 3 cut(s) 97, 198, 2324
NspV TTCGAA 1 cut(s) 1759
PaeI GCATGC 1 cut(s) 97
PaeR7I CTCGAG 1 cut(s) 2857
PagI TCATGA 1 cut(s) 468
PciSI GCTCTTC 1 cut(s) 2208
PctI GAATGC 3 cut(s) 112, 2440, 2831
PdmI GAANNNNTTC 1 cut(s) 27
PflFI GACNNNGTC 1 cut(s) 1064
PkrI GCNGC 9 cut(s) 111, 144, 1057, 1159, 1419, 1430, 1807, 2023, 2571
PleI GAGTC 6 cut(s) 76, 1009, 1302, 1686, 2774, 2789
PmaCI CACGTG 1 cut(s) 2588
PmlI CACGTG 1 cut(s) 2588
PpsI GAGTC 6 cut(s) 76, 1009, 1302, 1686, 2774, 2789
Ppu21I YACGTR 1 cut(s) 2588
Psp124BI GAGCTC 2 cut(s) 360, 1523
Psp6I CCWGG 6 cut(s) 439, 801, 1410, 2052, 2239, 2580
PspCI CACGTG 1 cut(s) 2588
PspGI CCWGG 6 cut(s) 439, 801, 1410, 2052, 2239, 2580
PspN4I GGNNCC 5 cut(s) 1767, 2114, 2145, 2407, 2427
PspPI GGNCC 3 cut(s) 799, 1319, 1921
PspXI VCTCGAGB 1 cut(s) 2857
PstNI CAGNNNCTG 4 cut(s) 296, 1316, 1417, 1805
PsuI RGATCY 3 cut(s) 2112, 2425, 2864
PsyI GACNNNGTC 1 cut(s) 1064
PvuII CAGCTG 2 cut(s) 10, 151
RsaI GTAC 2 cut(s) 2319, 2592
RsaNI GTAC 2 cut(s) 2318, 2591
RseI CAYNNNNRTG 4 cut(s) 365, 1896, 1973, 2711
Rsr2I CGGWCCG 1 cut(s) 1921
RsrII CGGWCCG 1 cut(s) 1921
SacI GAGCTC 2 cut(s) 360, 1523
SalI GTCGAC 1 cut(s) 2478
SapI GCTCTTC 1 cut(s) 2208
SaqAI TTAA 8 cut(s) 66, 284, 521, 1077, 1185, 1211, 1233, 1998
SatI GCNGC 9 cut(s) 110, 143, 1056, 1158, 1418, 1429, 1806, 2022, 2570
Sau96I GGNCC 3 cut(s) 799, 1319, 1921
SchI GAGTC 6 cut(s) 76, 1009, 1303, 1686, 2774, 2789
ScrFI CCNGG 6 cut(s) 441, 803, 1412, 2054, 2241, 2582
SduI GDGCHC 4 cut(s) 339, 360, 1375, 1523
SfaNI GCATC 7 cut(s) 6, 946, 1181, 1553, 1638, 2509, 2687
SfcI CTRYAG 4 cut(s) 837, 907, 1566, 2631
Sfr274I CTCGAG 1 cut(s) 2857
SfuI TTCGAA 1 cut(s) 1759
SinI GGWCC 3 cut(s) 799, 1319, 1921
SlaI CTCGAG 1 cut(s) 2857
SmiMI CAYNNNNRTG 4 cut(s) 365, 1896, 1973, 2711
SmlI CTYRAG 4 cut(s) 1647, 2356, 2813, 2857
SmoI CTYRAG 4 cut(s) 1647, 2356, 2813, 2857
SpeI ACTAGT 2 cut(s) 202, 2149
SphI GCATGC 1 cut(s) 97
SsiI CCGC 3 cut(s) 588, 1837, 2649
SspI AATATT 1 cut(s) 2131
SspMI CTAG 6 cut(s) 203, 1049, 1731, 2004, 2150, 2756
SstI GAGCTC 2 cut(s) 360, 1523
StyD4I CCNGG 6 cut(s) 439, 801, 1410, 2052, 2239, 2580
StyI CCWWGG 1 cut(s) 1985
TaaI ACNGT 5 cut(s) 298, 724, 1567, 2704, 2734
TaiI ACGT 2 cut(s) 468, 2590
TaqI TCGA 5 cut(s) 273, 1759, 2479, 2722, 2858
TaqII GACCGA 1 cut(s) 1909
TatI WGTACW 2 cut(s) 2317, 2590
Tru1I TTAA 8 cut(s) 66, 284, 521, 1077, 1185, 1211, 1233, 1998
Tru9I TTAA 8 cut(s) 66, 284, 521, 1077, 1185, 1211, 1233, 1998
TscAI CASTG 6 cut(s) 1329, 1570, 1617, 2109, 2480, 2707
TseFI GTSAC 1 cut(s) 1295
TseI GCWGC 9 cut(s) 109, 142, 1055, 1157, 1417, 1428, 1805, 2021, 2569
Tsp45I GTSAC 1 cut(s) 1295
TspGWI ACGGA 1 cut(s) 1568
TspRI CASTG 6 cut(s) 1329, 1570, 1617, 2109, 2480, 2707
Tth111I GACNNNGTC 1 cut(s) 1064
VpaK11BI GGWCC 3 cut(s) 799, 1319, 1921
XagI CCTNNNNNAGG 1 cut(s) 1409
XapI RAATTY 7 cut(s) 324, 407, 648, 1043, 1755, 2071, 2724
XbaI TCTAGA 1 cut(s) 1048
XceI RCATGY 3 cut(s) 97, 198, 2324
XcmI CCANNNNNNNNNTGG 3 cut(s) 702, 1531, 2178
XhoI CTCGAG 1 cut(s) 2857
XmiI GTMKAC 5 cut(s) 628, 1219, 1569, 2167, 2479
XmnI GAANNNNTTC 1 cut(s) 27
XspI CTAG 6 cut(s) 203, 1049, 1731, 2004, 2150, 2756
Zsp2I ATGCAT 2 cut(s) 266, 499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.