Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001408

Physical Location & Seq

Genomic Coordinates Forward (+)

24947286 .. 24952877

Gene Structure 5592 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G235800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4356 bp

ATGGATATATCGCTGGAGATTGTTAGTGTAGCGTTTTTCATAGGTTTATTGACATGGGTTTTGCTGGATATTATGAGACGAAGAAGAGGTGGTGGTAGCAATCGTACATGTTTGATATATAGAGCAGACAGAGGAAGTAAAGTTTTTGCTTTGCTTACCATTGTTGCAAATGCCTTAATCTCAACTTTTTACCTTGGTTTTGGCATTTATGAGTATTGGGTTGGTGGTGGGATTATAAGTTGGAAATCAATCTTCTCTGGCATGACTTGGGTTTTAGCCACACTAGTTACAGTGTACTCCAAGAACACAATTCACAGTGAGCAAAATAGGTGGCCTTGGGTCCTCATTATTTGGTGGATCTTATCCTGCAGTTTTTACTCACTTTCTCTGTGCCTTTATCTCACTAATCACTTCAGATCCTTAGATTTGCCAGATATTCTACCCAAGGCTAACATAGTCGAATTTGCTTCCTTTCCTCTGTCAGTACTACTTTTCTTCAATGCCTTTAGATATGCTGCCCAGGAAAAAAATGACCTTAAGCACCCATTACTTGAGAAGGAAGATGAAACTCCCCCCCAAAACACTGATACTTACACGAAAGCCGGAATTTGGAGCAAGGCTACATTTCAATGGCTGAACCCACTTTTCAAAAGGGGTCGAATCCAGAAACTGGAACTACCACATATTCCACATGTTCCTCCCTCAGAAAGAGCAGAAAATGCTTCATATGTGCTTGATGAGTCACTGAGGAAACAGAAAACGGAAGATTCTTCTTTGCCAAAATCCATAATGCGGGCTATACGAAGATCATTAGCCATAAATGCTGTTTTTGCAGGAGCCAATACGGCTGCATCATATATAGGTCCTTTCCTAATTACAAATTTTGTAAATTATTTACTTGAAAAGAATGACAATTCAAGCATCCACCATGGGTTGATTCTTGCGTTCATATTCTTCATTGCTAAGACATTGGAATCATTGAGTCAGAGGCAGTGGTATTTTGGTGCTCACCTCATTGGTGTACGAGTACGAGCAGCTCTCACTGTGTTGATTTACAAGAAATCTATTTCCATAAAGTATTCTGGTCCAAGCAATGGAAAAATTATTAATTTAATCAATGTGGATGTAGAAAGAATTGGAGACTTCTGCTGGTACATTCATGGTATTTGGTTGCTCCCACTTCAAGTAGTTTTGGCACTGGCTATCCTTTACAGGAATCTTGGTGCGGCGCCCTCTGCTGCTGCTCTTCTTTCCACAGTTTTGATCATGGTATGCAACACACCTTTGGCCAATACGCAAGAACGGCTTCACTCCAAGATCATGGAAGCGAACGATTCAAGAATCAAAGTAACATCAGAGATTCTGAAGAGCATGAGAGTTTTAAAGTTGCACTCATGGGAGCCCACATTCTTGAAGAAGCTGCTTCAACTCAGGGAAACAGAGAGGCATTGGCTGAAGAGATACCTTTATACATGCTCAGCAGTGGCCTTTCTCTTCTGGGCTTCACCAACTCTAGTCTCAGTTACCACTTTTGGTGTATGCATATTACTAAATACACCGTTAACAGTAGGTACGGTATTGTCTGCTTTAGCTACGTTTAGAATTCTACAAGAGCCTATCTACAACCTGCCAGAGCTCATTTCCATGATTACTCAGACAAAGGTATCTATTGATCGTATCCAAGAATTTGTCAAAGATGATCAAATGAAGCTGATTCCTTGCCATACTTCAAAAGTATCCGATGTCATGGTTGTTCTTGACGCAGGAGAGTATGCATGGAAAACAACCGAGCAAGACTTAAAGAAACCTACAATCAAAGTTACAGAGAAGATAGAGATAATGAAAGGATCCAAGGTTGCAGTTTGTGGCTCTGTTGGTTCTGGCAAGTCAAGCCTACTACTTAGTATACTTGGTGAGATTCCCAAAATTTCTGGGGCAGGAGCAAAGGTTTATGCAACCAAAGCTTATGTTTCACAAAGTGCTTGGATTCAAACTGGAACAATAAGGGAGAATGTGTTGTTTGGCAAGGAAATGAATAAGGGCTGTTATGAGTATGTTTTGGAAATTTGTGCTTTGGATCATGATGTCAATACGTGGGCAGATGGGGATTTGACTGTAGTGGGGGAGAGAGGGATGAACCTAAGTGGCGGAGAAAAACAAAGAATTCAACTGGCTAGAGCTGTCTATAGTGATTCAGATATTTACATTTTGGACGATCCTTTCAGTGCTGTGGATGCACATACAGGAACGCACTTGTTTAAGAAATGTCTCTTACAACACTTGTCCATGAAGACTGTCATCTACGCTACCCACCAATTAGAATTTTTAGAAGCAGCTGACCTTGTCTTGGTAATTAAAGATGGTCAAATTGCTGAGTCTGGAAAATATGAGGATTTGATTGCGGATCCAAACAGTGAACTTGTCAGACAAATGTCGGCGCATAAAAAATCATTTGACCAAGTTAACACATGCCAACAAGATGATTCCTTTAATAGAAGATCCCATCAAGTTAATCTAATAGAGGTTTTAGAAGAAAAAGAGGCCATCAACAATGGGAAGCTTTCAGGAAAAAGTAATGAAGAAGAGGCAGAAACTGGTCGAGTGAAATGGCGTGTTTACTCAACCTTTGTCACTTCTGCTTATAGAGGTGCTCTTGTTCCGGTCATCCTTCTCTGTCAAGTCTTCTTCCAGGGACTACAAATGGGGAGCAATTACTGGATTGCTTGGGCAACAAAGAATGAACACAAGGTCAGCAAAAAGCGGTTGATGTGGGTATTTGCTCTGTTATCTGCTGGGAGTTCTATCTTCATTCTGGGAAGGGCACTTTTTCTGTCAACTATTGCTATTCAGACTGCTCAGCGTCTCTTCCTTGGAATGATTACTTCAGTTTTCCGAGCACCAATTTCATTTTTCGACTCCACGCCTTCTAGTCGAATCCTCAATAGGTGTTCTACGGATCAAAACACAGTAGACATGGATATTCCATATAGAATAGCTGGATTGGCATTTGCCCTCATCCAGCTAATAAGCATCATCATCCTTATGTCTCAAGTGGCCTGGCAAGTCTTCATTCTTTTCCTTGGCGTTCTTGCCCTGTCCATGTGGTATCAAGCTTATTACATTACCACAGCCAGAGAACTTGCCCGGATGGTTGGAATTCGAAAGGCCCCAATTCTACATCACTTTTCAGAATCAATCACAGGTGCAGGAACACTTCGTTGTTTCAATCAAGGAGACCGTTTTTTGATGAAAACAATGGACCTGATTGATGATTATTCCCGAGTAGCCTTTCACAATTATGCCACGATGGAATGGCTGTCTGTTCGGACCAATTTTCTGTTCAACCTTGTTTTCTTCCTTCTTCTTATCATCTTGGTCAGCCTGCCTAGGTCTGCTATTGATCCTAGTTTGGCAGGATTGGCTGCTACCTATGGTTTAAACCTAAATGTCCTGCAGGCTTGGGTGATATGGAATATGTGTAATGTAGAAAACAAAATGATATCAGTTGAGAGAATTCTTCAGTTCACACATATACCAAGTGAAGCACCACTAGTGATTGAAGACTGTAGACCAGTTCCTGAATGGCCAATGGCAGGAAAAATTGAACTTGAAAACATTCATGTGCAATATAATCCATCTCTCCCGACTGTTCTCAAAGGGATCACTTGCACCTTCCCTGGAGGGAAGAAAATAGGAGTTGTGGGCAGGACAGGGAGTGGAAAGTCCACTTTGATCCAAGCTCTCTTTAGGATTGTGGAACCCTCAGGAGGGCAGATTCTTATTGACGGTGTGGATATTTCTAAAATAGGCCTGCAGGACTTAAGGTCAAGGTTGAGCATTATTCCACAAGACCCAATTTTATTTCAAGGTACCATGAGGACCAATCTGGATCCTTTGCAACAGCATTCTGATCAAGAACTCTGGGAGGTTCTGAATCAATGTCGACTGGCAGAGATCGTTAGGCAGGACCAAAGGCTTCTTGATGCACCTGTTGCTGAAGATGGAGAAAACTGGAGTGTTGGACAGAGGCAGCTTGTTTGCCTCGCCAGAGTGCTCTTGAAGAAAAGGAAAATTCTTGTGTTGGATGAGGCTACAGCTTCTATTGATACCGCAACTGATATTCTAATTCAGGAGACAATAAGGAAAGAAACGAGTGGATGCACAGTGATCACTGTGGCTCACCGGATTCCTACGGTTATTGACAATGACCTGGTTCTAGTTCTCGGTGAAGGCAAGGTTTTAGAGTATGATTCTCCAACTCGGTTACTTGAGGATAGTTCCTCTGCATTCTCCAAATTGGTGGCAGAATTCTTGAGGAGATCTTCCATGAGCAACTGCTATAGAGATCCTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0010290 GO:0015399 GO:0015405 GO:0015431 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071997 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04071 ko04976 ko04977 ko05206 map01523 map01524 map02010 map04071 map04976 map04977 map05206

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1452

Amino Acids

163.05

Weight (kDa)

8.65

Isoelectric Point (pI)

34.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001408)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g24630
malus_domestica	MD13G1109600.v1.1 MD13G1110900.v1.1 MD14G1118700.v1.1 MD16G1109500.v1.1
prunus_persica	Prupe.1G235800_v2.0.a1 Prupe.1G236100_v2.0.a1
pyrus_communis	pycom11g17660 pycom13g09660
rosa_chinensis	RchiOBHm_Chr2g0131921 RchiOBHm_Chr4g0431141 RchiOBHm_Chr4g0431381 RchiOBHm_Chr4g0431551 RchiOBHm_Chr4g0431711 RchiOBHm_Chr5g0037421 RchiOBHm_Chr6g0306331
rosa_laevigata	RLG00000006895 RLG00000010802
rosa_multiflora	Rmu_co8343513.1_g000001 Rmu_sc0002271.1_g000023 Rmu_sc0002521.1_g000013 Rmu_sc0003473.1_g000005 Rmu_sc0005185.1_g000002 Rmu_sc0005258.1_g000003 Rmu_sc0013042.1_g000001
rosa_roxburghii	Rroxscaffold_3G00259720 Rroxscaffold_5G00372860 Rroxscaffold_5G00372880 Rroxscaffold_5G00372890 Rroxscaffold_5G00372970 Rroxscaffold_5G00373130 Rroxscaffold_7G00161860 Rroxscaffold_7G00161870
rosa_rugosa	Rorug04G0248700 Rorug04G0250100.1 Rorug04G0251800 Rorug04G0251800 Rorug04G0251900 Rorug04G0252000 Rorug04G0252100
rosa_samantha	Rh4AG308400 Rh4BG312300 Rh4BG312400 Rh4BG313800 Rh4BG316200 Rh4CG328600 Rh4DG308800 Rh4DG311000
rosa_wichuraiana	Rw4G026510 Rw4G026750 Rw4G026820 Rw5G016080 Rw6G040190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	236
Acc36I	ACCTGC	1 cut(s)	1635
Acc65I	GGTACC	1 cut(s)	3869
AccB1I	GGYRCC	2 cut(s)	1228, 3869
AccB7I	CCANNNNNTGG	2 cut(s)	670, 1094
AccI	GTMKAC	4 cut(s)	1906, 2970, 3568, 3943
AciI	CCGC	6 cut(s)	793, 1226, 2148, 2402, 2761, 4110
AcoI	YGGCCR	2 cut(s)	1287, 3584
AcuI	CTGAAG	6 cut(s)	397, 1385, 1475, 2868, 3503, 4017
AcyI	GRCGYC	1 cut(s)	1229
AdeI	CACNNNGTG	1 cut(s)	1979
AfaI	GTAC	8 cut(s)	106, 296, 486, 1023, 1029, 1154, 1573, 3871
AfiI	CCNNNNNNNGG	8 cut(s)	609, 670, 792, 1094, 2347, 3593, 3767, 3768
AflII	CTTAAG	2 cut(s)	536, 3820
AflIII	ACRYGT	2 cut(s)	107, 691
AhdI	GACNNNNNGTC	1 cut(s)	3823
AhlI	ACTAGT	2 cut(s)	283, 3550
AjnI	CCWGG	5 cut(s)	519, 2688, 3056, 3676, 4209
AjuI	GAANNNNNNNTTGG	2 cut(s)	3323, 3355
Alw21I	GWGCWC	5 cut(s)	1009, 1638, 2653, 2899, 4056
Alw26I	GTCTC	8 cut(s)	70, 1134, 1522, 2273, 2867, 3051, 3228, 4127
AlwNI	CAGNNNCTG	3 cut(s)	670, 2594, 3578
Ama87I	CYCGRG	1 cut(s)	3279
AoxI	GGCC	8 cut(s)	332, 1287, 1485, 2541, 3054, 3165, 3584, 3808
ApeKI	GCWGC	9 cut(s)	515, 848, 1034, 1238, 1241, 1420, 2333, 3422, 4030
ArsI	GACNNNNNNTTYG	2 cut(s)	43, 75
AseI	ATTAAT	1 cut(s)	1107
Asp700I	GAANNNNTTC	2 cut(s)	1305, 3615
Asp718I	GGTACC	1 cut(s)	3869
AspA2I	CCTAGG	1 cut(s)	3386
AspLEI	GCGC	2 cut(s)	1231, 2440
AspS9I	GGNCC	8 cut(s)	340, 863, 1085, 3166, 3259, 3327, 3879, 3967
AsuC2I	CCSGG	1 cut(s)	3145
AsuHPI	GGTGA	6 cut(s)	1001, 1497, 1925, 3475, 4172, 4238
AsuII	TTCGAA	1 cut(s)	3160
AvaI	CYCGRG	1 cut(s)	3279
AvaII	GGWCC	7 cut(s)	340, 863, 1085, 3259, 3327, 3879, 3967
AvrII	CCTAGG	1 cut(s)	3386
AxyI	CCTNAGG	1 cut(s)	3763
BaeGI	GKGCMC	1 cut(s)	2824
BaeI	ACNNNNGTAYC	2 cut(s)	1647, 1680
BalI	TGGCCA	2 cut(s)	1289, 3586
BamHI	GGATCC	3 cut(s)	1847, 2404, 3889
BanI	GGYRCC	2 cut(s)	1228, 3869
BanII	GRGCYC	2 cut(s)	1404, 1638
BbsI	GAAGAC	4 cut(s)	2297, 2674, 3058, 3567
Bbv12I	GWGCWC	5 cut(s)	1009, 1638, 2653, 2899, 4056
BbvI	GCAGC	9 cut(s)	502, 835, 1046, 1225, 1228, 1407, 2345, 3409, 4042
BccI	CCATC	8 cut(s)	2096, 2354, 2511, 2552, 3142, 3301, 3643, 3995
BceAI	ACGGC	2 cut(s)	861, 1319
BciT130I	CCWGG	5 cut(s)	521, 2690, 3058, 3678, 4211
BciVI	GTATCC	2 cut(s)	1688, 1747
BclI	TGATCA	4 cut(s)	1263, 1699, 3910, 4167
BcnI	CCSGG	1 cut(s)	3145
BcoDI	GTCTC	8 cut(s)	70, 1134, 1522, 2273, 2867, 3051, 3228, 4127
BcuI	ACTAGT	2 cut(s)	283, 3550
BfaI	CTAG	8 cut(s)	284, 1514, 2175, 2928, 3387, 3405, 3551, 4217
BfmI	CTRYAG	8 cut(s)	367, 2115, 2185, 3452, 3565, 3812, 4092, 4339
BfoI	RGCGCY	1 cut(s)	1232
BfrI	CTTAAG	2 cut(s)	536, 3820
BfuAI	ACCTGC	1 cut(s)	1635
BfuI	GTATCC	2 cut(s)	1688, 1747
BglI	GCCNNNNNGGC	1 cut(s)	845
BglII	AGATCT	1 cut(s)	4319
BlnI	CCTAGG	1 cut(s)	3386
BlpI	GCTNAGC	2 cut(s)	1477, 2856
BmcAI	AGTACT	1 cut(s)	486
Bme1390I	CCNGG	6 cut(s)	521, 2690, 3058, 3145, 3678, 4211
Bme18I	GGWCC	7 cut(s)	340, 863, 1085, 3259, 3327, 3879, 3967
BmeRI	GACNNNNNGTC	1 cut(s)	3823
BmeT110I	CYCGRG	1 cut(s)	3279
BmgT120I	GGNCC	8 cut(s)	340, 863, 1085, 3166, 3259, 3327, 3879, 3967
BmrFI	CCNGG	6 cut(s)	521, 2690, 3058, 3145, 3678, 4211
BmsI	GCATC	6 cut(s)	860, 930, 2224, 3039, 3973, 4148
BoxI	GACNNNNGTC	1 cut(s)	2431
BpiI	GAAGAC	4 cut(s)	2297, 2674, 3058, 3567
BplI	GAGNNNNNCTC	2 cut(s)	1023, 1055
BpmI	CTGGAG	3 cut(s)	35, 3699, 4033
Bpu1102I	GCTNAGC	2 cut(s)	1477, 2856
Bpu14I	TTCGAA	1 cut(s)	3160
BpuEI	CTTGAG	4 cut(s)	572, 3033, 4289, 4333
BpuMI	CCSGG	1 cut(s)	3145
BsaAI	YACGTR	1 cut(s)	2094
BsaHI	GRCGYC	1 cut(s)	1229
BsaI	GGTCTC	1 cut(s)	3228
BsaWI	WCCGGW	2 cut(s)	2659, 4182
BsaXI	ACNNNNNCTCC	4 cut(s)	1932, 1962, 2000, 2030
Bsc4I	CCNNNNNNNGG	8 cut(s)	609, 670, 792, 1094, 2347, 3593, 3767, 3768
Bse1I	ACTGG	9 cut(s)	675, 1203, 1999, 2175, 2599, 2720, 3572, 3951, 4016
Bse21I	CCTNAGG	1 cut(s)	3763
Bse3DI	GCAATG	2 cut(s)	957, 1099
BseBI	CCWGG	5 cut(s)	521, 2690, 3058, 3678, 4211
BseLI	CCNNNNNNNGG	8 cut(s)	609, 670, 792, 1094, 2347, 3593, 3767, 3768
BseMI	GCAATG	2 cut(s)	957, 1099
BseMII	CTCAG	9 cut(s)	717, 737, 1444, 1491, 1533, 1667, 2364, 2870, 3777
BseNI	ACTGG	9 cut(s)	675, 1203, 1999, 2175, 2599, 2720, 3572, 3951, 4016
BseRI	GAGGAG	1 cut(s)	4330
BseSI	GKGCMC	1 cut(s)	2824
BseXI	GCAGC	9 cut(s)	502, 835, 1046, 1225, 1228, 1407, 2345, 3409, 4042
BseYI	CCCAGC	1 cut(s)	2792
BsgI	GTGCAG	1 cut(s)	3225
BshFI	GGCC	8 cut(s)	334, 1289, 1487, 2543, 3056, 3167, 3586, 3810
BshNI	GGYRCC	2 cut(s)	1228, 3869
BsiHKAI	GWGCWC	5 cut(s)	1009, 1638, 2653, 2899, 4056
BsiHKCI	CYCGRG	1 cut(s)	3279
BsiSI	CCGG	4 cut(s)	603, 2660, 3145, 4183
BslFI	GGGAC	1 cut(s)	2706
BslI	CCNNNNNNNGG	8 cut(s)	609, 670, 792, 1094, 2347, 3593, 3767, 3768
BsmAI	GTCTC	8 cut(s)	70, 1134, 1522, 2273, 2867, 3051, 3228, 4127
BsmBI	CGTCTC	2 cut(s)	70, 2867
BsmFI	GGGAC	1 cut(s)	2706
BsmI	GAATGC	2 cut(s)	3904, 4286
BsnI	GGCC	8 cut(s)	334, 1289, 1487, 2543, 3056, 3167, 3586, 3810
Bso31I	GGTCTC	1 cut(s)	3228
BsoBI	CYCGRG	1 cut(s)	3279
Bsp119I	TTCGAA	1 cut(s)	3160
Bsp1286I	GDGCHC	7 cut(s)	1009, 1404, 1638, 2653, 2824, 2899, 4056
Bsp1720I	GCTNAGC	2 cut(s)	1477, 2856
Bsp19I	CCATGG	1 cut(s)	928
BspACI	CCGC	6 cut(s)	793, 1226, 2148, 2402, 2761, 4110
BspANI	GGCC	8 cut(s)	334, 1289, 1487, 2543, 3056, 3167, 3586, 3810
BspCNI	CTCAG	9 cut(s)	716, 738, 1443, 1490, 1532, 1666, 2365, 2869, 3776
BspHI	TCATGA	1 cut(s)	2080
BspMAI	CTGCAG	3 cut(s)	371, 3456, 3816
BspMI	ACCTGC	1 cut(s)	1635
BspQI	GCTCTTC	2 cut(s)	1251, 1361
BspT104I	TTCGAA	1 cut(s)	3160
BspT107I	GGYRCC	2 cut(s)	1228, 3869
BspTI	CTTAAG	2 cut(s)	536, 3820
BspTNI	GGTCTC	1 cut(s)	3228
BsrDI	GCAATG	2 cut(s)	957, 1099
BsrI	ACTGG	9 cut(s)	675, 1203, 1999, 2175, 2599, 2720, 3572, 3951, 4016
BssNAI	GTATAC	1 cut(s)	1907
BssNI	GRCGYC	1 cut(s)	1229
BssT1I	CCWWGG	8 cut(s)	193, 335, 444, 928, 1851, 2869, 3079, 3386
Bst1107I	GTATAC	1 cut(s)	1907
Bst2UI	CCWGG	5 cut(s)	521, 2690, 3058, 3678, 4211
Bst6I	CTCTTC	7 cut(s)	79, 1251, 1361, 1451, 1499, 2577, 2870
BstACI	GRCGYC	1 cut(s)	1229
BstAFI	CTTAAG	2 cut(s)	536, 3820
BstAPI	GCANNNNNTGC	2 cut(s)	719, 3992
BstBAI	YACGTR	1 cut(s)	2094
BstBI	TTCGAA	1 cut(s)	3160
BstC8I	GCNNGC	4 cut(s)	795, 3383, 3456, 3812
BstDSI	CCRYGG	1 cut(s)	928
BstH2I	RGCGCY	1 cut(s)	1232
BstHHI	GCGC	2 cut(s)	1231, 2440
BstMAI	GTCTC	8 cut(s)	70, 1134, 1522, 2273, 2867, 3051, 3228, 4127
BstNI	CCWGG	5 cut(s)	521, 2690, 3058, 3678, 4211
BstNSI	RCATGY	4 cut(s)	111, 695, 1476, 2472
BstPAI	GACNNNNGTC	1 cut(s)	2431
BstSCI	CCNGG	6 cut(s)	519, 2688, 3056, 3143, 3676, 4209
BstSFI	CTRYAG	8 cut(s)	367, 2115, 2185, 3452, 3565, 3812, 4092, 4339
BstSLI	GKGCMC	1 cut(s)	2824
BstV1I	GCAGC	9 cut(s)	502, 835, 1046, 1225, 1228, 1407, 2345, 3409, 4042
BstV2I	GAAGAC	4 cut(s)	2297, 2674, 3058, 3567
BstX2I	RGATCY	8 cut(s)	357, 416, 1847, 2404, 2498, 3889, 4319, 4345
BstXI	CCANNNNNNTGG	2 cut(s)	1321, 4300
BstYI	RGATCY	8 cut(s)	357, 416, 1847, 2404, 2498, 3889, 4319, 4345
BstZ17I	GTATAC	1 cut(s)	1907
Bsu36I	CCTNAGG	1 cut(s)	3763
BsuI	GTATCC	2 cut(s)	1688, 1747
BsuRI	GGCC	8 cut(s)	334, 1289, 1487, 2543, 3056, 3167, 3586, 3810
BtgI	CCRYGG	1 cut(s)	928
BtsI	GCAGTG	2 cut(s)	998, 1488
BveI	ACCTGC	1 cut(s)	1635
Cac8I	GCNNGC	4 cut(s)	795, 3383, 3456, 3812
CaiI	CAGNNNCTG	3 cut(s)	670, 2594, 3578
CciI	TCATGA	1 cut(s)	2080
CfoI	GCGC	2 cut(s)	1231, 2440
Cfr13I	GGNCC	8 cut(s)	340, 863, 1085, 3166, 3259, 3327, 3879, 3967
CseI	GACGC	2 cut(s)	1769, 2849
CsiI	ACCWGGT	1 cut(s)	4209
Csp6I	GTAC	8 cut(s)	105, 295, 485, 1022, 1028, 1153, 1572, 3870
CspCI	CAANNNNNGTGG	2 cut(s)	311, 346
CviQI	GTAC	8 cut(s)	105, 295, 485, 1022, 1028, 1153, 1572, 3870
DinI	GGCGCC	1 cut(s)	1230
DraI	TTTAAA	2 cut(s)	1383, 3438
DraIII	CACNNNGTG	1 cut(s)	1979
DriI	GACNNNNNGTC	1 cut(s)	3823
EaeI	YGGCCR	2 cut(s)	1287, 3584
Eam1104I	CTCTTC	7 cut(s)	79, 1251, 1361, 1451, 1499, 2577, 2870
Eam1105I	GACNNNNNGTC	1 cut(s)	3823
EarI	CTCTTC	7 cut(s)	79, 1251, 1361, 1451, 1499, 2577, 2870
EciI	GGCGGA	1 cut(s)	2163
Ecl136II	GAGCTC	1 cut(s)	1636
Eco130I	CCWWGG	8 cut(s)	193, 335, 444, 928, 1851, 2869, 3079, 3386
Eco147I	AGGCCT	1 cut(s)	3810
Eco24I	GRGCYC	2 cut(s)	1404, 1638
Eco31I	GGTCTC	1 cut(s)	3228
Eco32I	GATATC	1 cut(s)	3501
Eco47I	GGWCC	7 cut(s)	340, 863, 1085, 3259, 3327, 3879, 3967
Eco53kI	GAGCTC	1 cut(s)	1636
Eco57I	CTGAAG	6 cut(s)	397, 1385, 1475, 2868, 3503, 4017
Eco81I	CCTNAGG	1 cut(s)	3763
Eco88I	CYCGRG	1 cut(s)	3279
EcoICRI	GAGCTC	1 cut(s)	1636
EcoO109I	RGGNCCY	3 cut(s)	340, 863, 3166
EcoRI	GAATTC	5 cut(s)	1602, 2163, 3156, 3513, 4307
EcoRII	CCWGG	5 cut(s)	519, 2688, 3056, 3676, 4209
EcoRV	GATATC	1 cut(s)	3501
EcoT14I	CCWWGG	8 cut(s)	193, 335, 444, 928, 1851, 2869, 3079, 3386
EcoT22I	ATGCAT	2 cut(s)	1544, 1777
EcoT38I	GRGCYC	2 cut(s)	1404, 1638
EgeI	GGCGCC	1 cut(s)	1230
EheI	GGCGCC	1 cut(s)	1230
ErhI	CCWWGG	8 cut(s)	193, 335, 444, 928, 1851, 2869, 3079, 3386
Esp3I	CGTCTC	2 cut(s)	70, 2867
FalI	AAGNNNNNCTT	2 cut(s)	1290, 1322
FaqI	GGGAC	1 cut(s)	2706
FauI	CCCGC	1 cut(s)	786
FauNDI	CATATG	1 cut(s)	727
FbaI	TGATCA	4 cut(s)	1263, 1699, 3910, 4167
FblI	GTMKAC	4 cut(s)	1906, 2970, 3568, 3943
FriOI	GRGCYC	2 cut(s)	1404, 1638
FspBI	CTAG	8 cut(s)	284, 1514, 2175, 2928, 3387, 3405, 3551, 4217
GlaI	GCGC	2 cut(s)	1230, 2439
GsaI	CCCAGC	1 cut(s)	2796
GsuI	CTGGAG	3 cut(s)	35, 3699, 4033
HaeII	RGCGCY	1 cut(s)	1232
HaeIII	GGCC	8 cut(s)	334, 1289, 1487, 2543, 3056, 3167, 3586, 3810
HapII	CCGG	4 cut(s)	603, 2660, 3145, 4183
HgaI	GACGC	2 cut(s)	1769, 2849
HhaI	GCGC	2 cut(s)	1231, 2440
Hin1I	GRCGYC	1 cut(s)	1229
Hin6I	GCGC	2 cut(s)	1229, 2438
HinP1I	GCGC	2 cut(s)	1229, 2438
HincII	GTYRAC	4 cut(s)	1563, 2464, 2835, 3944
HindII	GTYRAC	4 cut(s)	1563, 2464, 2835, 3944
HindIII	AAGCTT	3 cut(s)	1962, 2558, 3111
HpaI	GTTAAC	2 cut(s)	1563, 2464
HpaII	CCGG	4 cut(s)	603, 2660, 3145, 4183
HphI	GGTGA	6 cut(s)	1001, 1497, 1925, 3475, 4172, 4238
HpyAV	CCTTC	7 cut(s)	550, 2678, 2811, 2934, 3368, 3682, 4223
HpyCH4IV	ACGT	2 cut(s)	1595, 2093
HpySE526I	ACGT	2 cut(s)	1595, 2093
Hsp92I	GRCGYC	1 cut(s)	1229
HspAI	GCGC	2 cut(s)	1229, 2438
KasI	GGCGCC	1 cut(s)	1228
KpnI	GGTACC	1 cut(s)	3873
Ksp22I	TGATCA	4 cut(s)	1263, 1699, 3910, 4167
KspAI	GTTAAC	2 cut(s)	1563, 2464
LguI	GCTCTTC	2 cut(s)	1251, 1361
LmnI	GCTCC	6 cut(s)	612, 836, 1179, 1399, 1940, 2706
Lsp1109I	GCAGC	9 cut(s)	502, 835, 1046, 1225, 1228, 1407, 2345, 3409, 4042
LweI	GCATC	6 cut(s)	860, 930, 2224, 3039, 3973, 4148
MabI	ACCWGGT	1 cut(s)	4209
MaeI	CTAG	8 cut(s)	284, 1514, 2175, 2928, 3387, 3405, 3551, 4217
MaeII	ACGT	2 cut(s)	1595, 2093
MaeIII	GTNAC	7 cut(s)	286, 741, 1348, 1522, 1819, 2629, 4263
MflI	RGATCY	8 cut(s)	357, 416, 1847, 2404, 2498, 3889, 4319, 4345
MhlI	GDGCHC	7 cut(s)	1009, 1404, 1638, 2653, 2824, 2899, 4056
MlsI	TGGCCA	2 cut(s)	1289, 3586
MluNI	TGGCCA	2 cut(s)	1289, 3586
Mly113I	GGCGCC	1 cut(s)	1229
MlyI	GAGTC	4 cut(s)	749, 991, 2384, 2909
MmeI	TCCRAC	5 cut(s)	221, 3133, 4000, 4062, 4280
Mox20I	TGGCCA	2 cut(s)	1289, 3586
Mph1103I	ATGCAT	2 cut(s)	1544, 1777
MroXI	GAANNNNTTC	2 cut(s)	1305, 3615
MscI	TGGCCA	2 cut(s)	1289, 3586
MslI	CAYNNNNRTG	5 cut(s)	628, 1643, 3041, 3297, 3620
Msp20I	TGGCCA	2 cut(s)	1289, 3586
MspA1I	CMGCKG	1 cut(s)	2336
MspCI	CTTAAG	2 cut(s)	536, 3820
MspI	CCGG	4 cut(s)	603, 2660, 3145, 4183
MspR9I	CCNGG	6 cut(s)	521, 2690, 3058, 3145, 3678, 4211
MssI	GTTTAAAC	1 cut(s)	3438
Mva1269I	GAATGC	2 cut(s)	3904, 4286
MvaI	CCWGG	5 cut(s)	521, 2690, 3058, 3678, 4211
NarI	GGCGCC	1 cut(s)	1229
NciI	CCSGG	1 cut(s)	3145
NcoI	CCATGG	1 cut(s)	928
NdeI	CATATG	1 cut(s)	727
NmuCI	GTSAC	2 cut(s)	741, 2629
NsiI	ATGCAT	2 cut(s)	1544, 1777
NspI	RCATGY	4 cut(s)	111, 695, 1476, 2472
NspV	TTCGAA	1 cut(s)	3160
PagI	TCATGA	1 cut(s)	2080
PceI	AGGCCT	1 cut(s)	3810
PciI	ACATGT	2 cut(s)	107, 691
PciSI	GCTCTTC	2 cut(s)	1251, 1361
PctI	GAATGC	2 cut(s)	3904, 4286
PdmI	GAANNNNTTC	2 cut(s)	1305, 3615
PflFI	GACNNNGTC	1 cut(s)	2342
PflMI	CCANNNNNTGG	2 cut(s)	670, 1094
PleI	GAGTC	4 cut(s)	748, 990, 2383, 2909
PluTI	GGCGCC	1 cut(s)	1232
PmeI	GTTTAAAC	1 cut(s)	3438
PpsI	GAGTC	4 cut(s)	748, 990, 2383, 2909
Ppu21I	YACGTR	1 cut(s)	2094
PpuMI	RGGWCCY	2 cut(s)	340, 863
PscI	ACATGT	2 cut(s)	107, 691
PshAI	GACNNNNGTC	1 cut(s)	2431
PshBI	ATTAAT	1 cut(s)	1107
PsiI	TTATAA	1 cut(s)	236
Psp124BI	GAGCTC	1 cut(s)	1638
Psp5II	RGGWCCY	2 cut(s)	340, 863
Psp6I	CCWGG	5 cut(s)	519, 2688, 3056, 3676, 4209
PspFI	CCCAGC	1 cut(s)	2792
PspGI	CCWGG	5 cut(s)	519, 2688, 3056, 3676, 4209
PspPI	GGNCC	8 cut(s)	340, 863, 1085, 3166, 3259, 3327, 3879, 3967
PspPPI	RGGWCCY	2 cut(s)	340, 863
PstI	CTGCAG	3 cut(s)	371, 3456, 3816
PstNI	CAGNNNCTG	3 cut(s)	670, 2594, 3578
PsuI	RGATCY	8 cut(s)	357, 416, 1847, 2404, 2498, 3889, 4319, 4345
PsyI	GACNNNGTC	1 cut(s)	2342
PvuII	CAGCTG	1 cut(s)	2336
RsaI	GTAC	8 cut(s)	106, 296, 486, 1023, 1029, 1154, 1573, 3871
RsaNI	GTAC	8 cut(s)	105, 295, 485, 1022, 1028, 1153, 1572, 3870
RseI	CAYNNNNRTG	5 cut(s)	628, 1643, 3041, 3297, 3620
SacI	GAGCTC	1 cut(s)	1638
SalI	GTCGAC	1 cut(s)	3942
SapI	GCTCTTC	2 cut(s)	1251, 1361
Sau96I	GGNCC	8 cut(s)	340, 863, 1085, 3166, 3259, 3327, 3879, 3967
SbfI	CCTGCAGG	2 cut(s)	3456, 3816
ScaI	AGTACT	1 cut(s)	486
SchI	GAGTC	4 cut(s)	749, 991, 2384, 2909
ScrFI	CCNGG	6 cut(s)	521, 2690, 3058, 3145, 3678, 4211
SdaI	CCTGCAGG	2 cut(s)	3456, 3816
SduI	GDGCHC	7 cut(s)	1009, 1404, 1638, 2653, 2824, 2899, 4056
SexAI	ACCWGGT	1 cut(s)	4209
SfaNI	GCATC	6 cut(s)	860, 930, 2224, 3039, 3973, 4148
SfcI	CTRYAG	8 cut(s)	367, 2115, 2185, 3452, 3565, 3812, 4092, 4339
SfoI	GGCGCC	1 cut(s)	1230
SfuI	TTCGAA	1 cut(s)	3160
SinI	GGWCC	7 cut(s)	340, 863, 1085, 3259, 3327, 3879, 3967
SmiMI	CAYNNNNRTG	5 cut(s)	628, 1643, 3041, 3297, 3620
SmlI	CTYRAG	6 cut(s)	536, 551, 3048, 3820, 4268, 4312
SmoI	CTYRAG	6 cut(s)	536, 551, 3048, 3820, 4268, 4312
SpeI	ACTAGT	2 cut(s)	283, 3550
Sse8387I	CCTGCAGG	2 cut(s)	3456, 3816
SseBI	AGGCCT	1 cut(s)	3810
SsiI	CCGC	6 cut(s)	793, 1226, 2148, 2402, 2761, 4110
SspDI	GGCGCC	1 cut(s)	1228
SspMI	CTAG	8 cut(s)	284, 1514, 2175, 2928, 3387, 3405, 3551, 4217
SstI	GAGCTC	1 cut(s)	1638
StuI	AGGCCT	1 cut(s)	3810
StyD4I	CCNGG	6 cut(s)	519, 2688, 3056, 3143, 3676, 4209
StyI	CCWWGG	8 cut(s)	193, 335, 444, 928, 1851, 2869, 3079, 3386
TaiI	ACGT	2 cut(s)	1598, 2096
TaqI	TCGA	7 cut(s)	459, 658, 2599, 2913, 2932, 3160, 3943
TatI	WGTACW	2 cut(s)	294, 484
TauI	GCSGC	1 cut(s)	1229
TseFI	GTSAC	2 cut(s)	741, 2629
TseI	GCWGC	9 cut(s)	515, 848, 1034, 1238, 1241, 1420, 2333, 3422, 4030
Tsp45I	GTSAC	2 cut(s)	741, 2629
TspGWI	ACGGA	2 cut(s)	776, 2969
Tth111I	GACNNNGTC	1 cut(s)	2342
Van91I	CCANNNNNTGG	2 cut(s)	670, 1094
Vha464I	CTTAAG	2 cut(s)	536, 3820
VpaK11BI	GGWCC	7 cut(s)	340, 863, 1085, 3259, 3327, 3879, 3967
VspI	ATTAAT	1 cut(s)	1107
XceI	RCATGY	4 cut(s)	111, 695, 1476, 2472
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3579
XmaJI	CCTAGG	1 cut(s)	3386
XmiI	GTMKAC	4 cut(s)	1906, 2970, 3568, 3943
XmnI	GAANNNNTTC	2 cut(s)	1305, 3615
XspI	CTAG	8 cut(s)	284, 1514, 2175, 2928, 3387, 3405, 3551, 4217
ZrmI	AGTACT	1 cut(s)	486
Zsp2I	ATGCAT	2 cut(s)	1544, 1777

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.