Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0001408

Physical Location & Seq

Genomic Coordinates Forward (+)

52714982 .. 52720438

Gene Structure 5457 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G026510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2835 bp

ATGACTTGGGGTTTGGCAACAATAGTGACAATCTACTCCAAGAACAGAGGTTTTATTGAGCACAAAAGGTGGCCTTGGGTCCTTATTTTTTGGTGGATCTTTTCCTTCATTTTTTGCTCACTTTCTGTGTGCCTTCACTTGATCAGCCACTACTTCAAATCCACAAAGTTCCCAGATTTTGTTCTAAAGGCAAACATAGTTGAATTCGCTTCCATTCCCCTGTCGATGTTGCTTTGTTGCAATGTTTTGAGTTATGTCCAGAAAGACAGTGATCTCAATGAACCATTACTCGAGGAGGAGTATGAAATTCAAACTGATAGTTACACTACTGCTGGAATATGGAGCAAAATAACATTCCAGTGGATGAATCCAATTTTTAAAATGGGACTTCACATCCAAAAACTGGAAGTGTCTCATATACCATCTATTCCTCCTTCAGCAAGAGCCGAAAGTGCTTCTTCTTTGCTCCAAGAATCACTCGAACACCACTCTTCATTATTAAAAGCCATACTGAGGGCTGTATGGAAATCACTAGCCATAAATGCAGTTTTTGCAGGTGTCAATGTTGTTGCATCCTATACTGGTCCCTTCATAATAAGAAACTTTATGAAGTACATAGTTGGAAAGGATGACAGCTCAAACATGTATGGAGAGAAGCTTGCCTTCGTATTCTTTTTTGCAATGACTTTGGACTCAATTACTCAAAGGCAAATGTCTTTTGGTGCTCGGCAAATTGGTCTACAAGTCAGAGCAGCTTTGACCGCCTTAATCTACAAGAAGTGCATCTCGATTAAGTACTCTGGTCCAAGCAATGGTGAAATCATAAACTTAATCAACATGGACGTAGAAGTGGTTGGAGAATTCTTCTCTTCTATTCATGGAGCTTGGGTGCTTCCCCTTCAAGTGTTGCTGGCATTGGTTATCTTATACAGAAATCTCGGTGCTGCCCCTTCTCTGGCTGCCTTTTTGGCCACAGTAGCAGTAGTGGTATGCAACACACCATTGGCTCGAAGGCAACAAATTCTCCAATCAAAAATCATGGAAGCAAAGGATTCAAGAATCAAGAGAACTTCAGAGACTCTAAAGAGCATGAGAGTCATAAAATTCAATTCATGGGATTCTAGTTTCTTAGAGAAGCTACTTCAACTTAGAGAAACTGAGAAAAGTTGGTTAAGGAGATTTTTGTACACTAAGGCGGCAGTGGTATTTCTCTTTTGGACTTCACCAACCATAGTTTCAGTGGTTACTTTTGGTGTTTGCATCATGATGAAAACACCATTAGAACCATATACAGTCCTGTCAGCTTTAGCCACTTTCAAAATCCTTACCGAGCCAATTTACAACCTTCCAGAGTTTATCTCAACAATTATCCAAACAAAGGTTTCGGTTAAGCGAATTCAAGAATTTATCAGATTAGATAAACAAGTGGAGCTGATTCCTTGTGATTATTCTTGCACTGCATCATCTACTTCAGCAATCAGGGTTGAAATGGAGTCTGGAGAGTTTTCTTGGAAGGCAAGCAATGAACATGTAGAGAGACCTACAATCACGGTAGTTAAAGATGGTCAAATTGCTCAAGCCGGCACTTACGAGAAGTTGATTAAAGATCCTAATGGCGAACTTGTCAGACAAATGACTGCACATAGAAAATCTCTACACCAAGTTCACAGCAGTCGACCTGATTCTTTAAGCAACACCACAACTACTGGCCTCGTGGATAATGGAATTACTGAAAGAGTATTGGATATTGAAGAAACGGAAAAAGCTTCAACCAATGACCAGATTACTGTCAAAGATATCCGAGGGGAAGAAGAAGAAACACACAATGGTCGGGTAAAATGGAGTGTATATTCTACATTTGTGACTTGTGCTTTTGGAGGTCTACTGCTTCCGGTGATCCTTCTCTGTCACGTCCTCTTCCAAGTGCTCCAGATGGCAAGCAACTACTGGATTGCTTGGGCAGCAGGGAAGGAAAACACTGTCACCAGAGGAAACATGTTGTGGATTTTCGCTCTTTTATCTGGTGGAAGCTCTGTCTTCATCTTGGGAAGGGCGGTCTTCCTTTCAGTTATTACTATTGAAACTTCCCAGAATCTCTTTGTTGGGATGATTACTTCAGTTTTCCGAGCGCCTATGGCATTTTTTGACTCTACACCTTCTAGTCGAATCCTCACTAGGGGTTGGGTGATTTGGAATCTGTGCAATGTTGAAAACAAAATGATATCTGTTGAGAGAATTCTTCAATTCACTGGATTACAAAGTGAGGCACCACTTGTGATCGAAGCTTCTAGGCCAAACTCTGAATGGCCAGATGAAGGACAAATTGAATTTCAAAACGTGCAAGTTCAATATCAGCCTGAGGGTCCAATGGTACTGAAAGGGATCACTTGCACATTCTCTAAAAGGATGAAAATTGGAGTGGTGGGAAGAACAGGATGTGGAAAGTCCACTATGATCCAAGCCTTGTTTAGAGTTGTTGAGCTCTCAGGAGGGAAAATTCTCATTGATGAACAAGACATTTCTAAAATAGGCCTGCAGGATTTAAGGTCAAGTTTAGGCATCATCCCACAGGACCCAACTTTATTTCAAGGAAGCTTGAGGAATAATCTGGATCCTCTGCAGCAACATTCTGATCCAGAAATACTGGAGGTTGTGAAGAAATGTCGACTTGGGAACTTAGTGAGGCAAGACCAAATGCTCCTGGATGCACCTGGTAGGATTGTGGAGTATGAATCTCCTGCTCGGCTGATTAAGGAAAACTCGTCTGCATTTTCGAAGTTAGTTGCGGAATTCTTGAGGAGATCTTCCATAAGAAAGAACAACTGCTCATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006810 GO:0008150 GO:0009506 GO:0010290 GO:0015399 GO:0015405 GO:0015431 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071997 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04071 ko04976 ko04977 ko05206 map01523 map01524 map02010 map04071 map04976 map04977 map05206

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

944

Amino Acids

106.25

Weight (kDa)

8.72

Isoelectric Point (pI)

41.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	179 - 445	4.3e-20	ABC transporter transmembrane region
ABC_membrane	PF00664	634 - 726	7.4e-06	ABC transporter transmembrane region
ABC_tran	PF00005	792 - 893	2.9e-13	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001408)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g24630
malus_domestica	MD13G1109600.v1.1 MD13G1110900.v1.1 MD14G1118700.v1.1 MD16G1109500.v1.1
prunus_persica	Prupe.1G235800_v2.0.a1 Prupe.1G236100_v2.0.a1
pyrus_communis	pycom11g17660 pycom13g09660
rosa_chinensis	RchiOBHm_Chr2g0131921 RchiOBHm_Chr4g0431141 RchiOBHm_Chr4g0431381 RchiOBHm_Chr4g0431551 RchiOBHm_Chr4g0431711 RchiOBHm_Chr5g0037421 RchiOBHm_Chr6g0306331
rosa_laevigata	RLG00000006895 RLG00000010802
rosa_multiflora	Rmu_co8343513.1_g000001 Rmu_sc0002271.1_g000023 Rmu_sc0002521.1_g000013 Rmu_sc0003473.1_g000005 Rmu_sc0005185.1_g000002 Rmu_sc0005258.1_g000003 Rmu_sc0013042.1_g000001
rosa_roxburghii	Rroxscaffold_3G00259720 Rroxscaffold_5G00372860 Rroxscaffold_5G00372880 Rroxscaffold_5G00372890 Rroxscaffold_5G00372970 Rroxscaffold_5G00373130 Rroxscaffold_7G00161860 Rroxscaffold_7G00161870
rosa_rugosa	Rorug04G0248700 Rorug04G0250100.1 Rorug04G0251800 Rorug04G0251800 Rorug04G0251900 Rorug04G0252000 Rorug04G0252100
rosa_samantha	Rh4AG308400 Rh4BG312300 Rh4BG312400 Rh4BG313800 Rh4BG316200 Rh4CG328600 Rh4DG308800 Rh4DG311000
rosa_wichuraiana	Rw4G026510 Rw4G026750 Rw4G026820 Rw5G016080 Rw6G040190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	545
Acc36I	ACCTGC	1 cut(s)	545
AccB1I	GGYRCC	1 cut(s)	2266
AccB7I	CCANNNNNTGG	2 cut(s)	403, 812
AccI	GTMKAC	4 cut(s)	739, 1675, 1882, 2665
AciI	CCGC	4 cut(s)	762, 1196, 2054, 2786
AclWI	GGATC	8 cut(s)	104, 1601, 1891, 2390, 2449, 2606, 2619, 2627
AcoI	YGGCCR	2 cut(s)	969, 2306
AcuI	CTGAAG	4 cut(s)	420, 1056, 1455, 2100
AfaI	GTAC	4 cut(s)	614, 797, 1187, 2373
AfiI	CCNNNNNNNGG	7 cut(s)	403, 513, 812, 955, 1378, 2176, 2315
AflIII	ACRYGT	3 cut(s)	642, 1528, 1995
AjiI	CACGTC	1 cut(s)	1912
AjnI	CCWGG	2 cut(s)	2700, 2710
AjuI	GAANNNNNNNTTGG	2 cut(s)	1219, 1251
Alw21I	GWGCWC	4 cut(s)	63, 727, 1929, 2484
Alw26I	GTCTC	3 cut(s)	417, 1070, 1531
AlwI	GGATC	8 cut(s)	104, 1601, 1891, 2390, 2449, 2606, 2619, 2627
Ama87I	CYCGRG	1 cut(s)	290
AoxI	GGCC	6 cut(s)	71, 969, 1708, 2291, 2306, 2530
ApeKI	GCWGC	5 cut(s)	752, 944, 959, 1961, 2620
ArsI	GACNNNNNNTTYG	1 cut(s)	27
AspLEI	GCGC	1 cut(s)	2131
AspS9I	GGNCC	5 cut(s)	79, 584, 803, 2363, 2572
AsuHPI	GGTGA	5 cut(s)	827, 1215, 1906, 1975, 2197
AsuII	TTCGAA	1 cut(s)	2774
AvaI	CYCGRG	1 cut(s)	290
AvaII	GGWCC	5 cut(s)	79, 584, 803, 2363, 2572
AxyI	CCTNAGG	1 cut(s)	2358
BalI	TGGCCA	2 cut(s)	971, 2308
BamHI	GGATCC	1 cut(s)	2611
BanI	GGYRCC	1 cut(s)	2266
BanII	GRGCYC	1 cut(s)	2484
BauI	CACGAG	1 cut(s)	1712
BbsI	GAAGAC	2 cut(s)	2029, 2050
Bbv12I	GWGCWC	4 cut(s)	63, 727, 1929, 2484
BbvI	GCAGC	5 cut(s)	764, 931, 946, 1973, 2632
BccI	CCATC	3 cut(s)	430, 1556, 1927
BciT130I	CCWGG	2 cut(s)	2702, 2712
BclI	TGATCA	1 cut(s)	141
BcoDI	GTCTC	3 cut(s)	417, 1070, 1531
BfaI	CTAG	5 cut(s)	533, 1122, 2160, 2175, 2289
BfmI	CTRYAG	2 cut(s)	2534, 2618
BfoI	RGCGCY	1 cut(s)	2132
BfuAI	ACCTGC	1 cut(s)	545
BglI	GCCNNNNNGGC	1 cut(s)	968
BglII	AGATCT	1 cut(s)	2801
BisI	GCNGC	6 cut(s)	753, 945, 960, 1197, 1962, 2621
BlsI	GCNGC	6 cut(s)	754, 946, 961, 1198, 1963, 2622
BmcAI	AGTACT	1 cut(s)	797
Bme1390I	CCNGG	2 cut(s)	2702, 2712
Bme18I	GGWCC	5 cut(s)	79, 584, 803, 2363, 2572
BmeT110I	CYCGRG	1 cut(s)	290
BmgBI	CACGTC	1 cut(s)	1912
BmgT120I	GGNCC	5 cut(s)	79, 584, 803, 2363, 2572
BmiI	GGNNCC	6 cut(s)	80, 586, 2268, 2364, 2574, 2613
BmrFI	CCNGG	2 cut(s)	2702, 2712
BmsI	GCATC	6 cut(s)	581, 792, 1269, 1469, 2568, 2695
BpiI	GAAGAC	2 cut(s)	2029, 2050
BplI	GAGNNNNNCTC	2 cut(s)	1343, 1375
BpmI	CTGGAG	3 cut(s)	1518, 1913, 2666
Bpu14I	TTCGAA	1 cut(s)	2774
BpuEI	CTTGAG	3 cut(s)	1560, 2617, 2815
BsaI	GGTCTC	1 cut(s)	1531
BsaJI	CCNNGG	2 cut(s)	74, 1801
BsaWI	WCCGGW	1 cut(s)	1891
BsaXI	ACNNNNNCTCC	4 cut(s)	873, 903, 1008, 1038
Bsc4I	CCNNNNNNNGG	7 cut(s)	403, 513, 812, 955, 1378, 2176, 2315
Bse118I	RCCGGY	1 cut(s)	1580
Bse1I	ACTGG	7 cut(s)	358, 408, 586, 1711, 1952, 2254, 2649
Bse21I	CCTNAGG	1 cut(s)	2358
Bse3DI	GCAATG	5 cut(s)	247, 687, 817, 1528, 2209
BseBI	CCWGG	2 cut(s)	2702, 2712
BseDI	CCNNGG	2 cut(s)	74, 1801
BseGI	GGATG	9 cut(s)	369, 393, 572, 634, 2112, 2412, 2441, 2562, 2710
BseLI	CCNNNNNNNGG	7 cut(s)	403, 513, 812, 955, 1378, 2176, 2315
BseMI	GCAATG	5 cut(s)	247, 687, 817, 1528, 2209
BseMII	CTCAG	4 cut(s)	503, 1149, 2349, 2499
BseNI	ACTGG	7 cut(s)	358, 408, 586, 1711, 1952, 2254, 2649
BseRI	GAGGAG	3 cut(s)	308, 311, 2812
BseXI	GCAGC	5 cut(s)	764, 931, 946, 1973, 2632
BsgI	GTGCAG	1 cut(s)	1623
BshFI	GGCC	6 cut(s)	73, 971, 1710, 2293, 2308, 2532
BshNI	GGYRCC	1 cut(s)	2266
BsiHKAI	GWGCWC	4 cut(s)	63, 727, 1929, 2484
BsiHKCI	CYCGRG	1 cut(s)	290
BsiSI	CCGG	2 cut(s)	1581, 1892
BslFI	GGGAC	2 cut(s)	399, 570
BslI	CCNNNNNNNGG	7 cut(s)	403, 513, 812, 955, 1378, 2176, 2315
BsmAI	GTCTC	3 cut(s)	417, 1070, 1531
BsmFI	GGGAC	2 cut(s)	399, 570
BsnI	GGCC	6 cut(s)	73, 971, 1710, 2293, 2308, 2532
Bso31I	GGTCTC	1 cut(s)	1531
BsoBI	CYCGRG	1 cut(s)	290
Bsp119I	TTCGAA	1 cut(s)	2774
Bsp1286I	GDGCHC	4 cut(s)	63, 727, 1929, 2484
Bsp1407I	TGTACA	1 cut(s)	1185
BspACI	CCGC	4 cut(s)	762, 1196, 2054, 2786
BspANI	GGCC	6 cut(s)	73, 971, 1710, 2293, 2308, 2532
BspCNI	CTCAG	4 cut(s)	504, 1150, 2350, 2498
BspHI	TCATGA	1 cut(s)	1263
BspLI	GGNNCC	6 cut(s)	80, 586, 2268, 2364, 2574, 2613
BspMAI	CTGCAG	2 cut(s)	2538, 2622
BspMI	ACCTGC	1 cut(s)	545
BspPI	GGATC	8 cut(s)	104, 1601, 1891, 2390, 2449, 2606, 2619, 2627
BspT104I	TTCGAA	1 cut(s)	2774
BspT107I	GGYRCC	1 cut(s)	2266
BspTNI	GGTCTC	1 cut(s)	1531
BsrDI	GCAATG	5 cut(s)	247, 687, 817, 1528, 2209
BsrFI	RCCGGY	1 cut(s)	1580
BsrGI	TGTACA	1 cut(s)	1185
BsrI	ACTGG	7 cut(s)	358, 408, 586, 1711, 1952, 2254, 2649
BssAI	RCCGGY	1 cut(s)	1580
BssECI	CCNNGG	2 cut(s)	74, 1801
BssSI	CACGAG	1 cut(s)	1712
BssT1I	CCWWGG	1 cut(s)	74
Bst2BI	CACGAG	1 cut(s)	1712
Bst2UI	CCWGG	2 cut(s)	2702, 2712
Bst4CI	ACNGT	6 cut(s)	269, 976, 1294, 1552, 1789, 1981
Bst6I	CTCTTC	3 cut(s)	496, 874, 1922
BstAPI	GCANNNNNTGC	1 cut(s)	551
BstAUI	TGTACA	1 cut(s)	1185
BstBI	TTCGAA	1 cut(s)	2774
BstC8I	GCNNGC	6 cut(s)	660, 912, 1519, 1582, 1939, 2534
BstDEI	CTNAG	8 cut(s)	512, 1129, 1148, 1158, 1191, 2358, 2485, 2677
BstF5I	GGATG	9 cut(s)	369, 393, 572, 634, 2112, 2412, 2441, 2562, 2710
BstH2I	RGCGCY	1 cut(s)	2132
BstHHI	GCGC	1 cut(s)	2131
BstMAI	GTCTC	3 cut(s)	417, 1070, 1531
BstMWI	GCNNNNNNNGC	8 cut(s)	452, 542, 551, 761, 968, 977, 1961, 2135
BstNI	CCWGG	2 cut(s)	2702, 2712
BstNSI	RCATGY	3 cut(s)	646, 1532, 1999
BstSCI	CCNGG	2 cut(s)	2700, 2710
BstSFI	CTRYAG	2 cut(s)	2534, 2618
BstV1I	GCAGC	5 cut(s)	764, 931, 946, 1973, 2632
BstV2I	GAAGAC	2 cut(s)	2029, 2050
BstX2I	RGATCY	4 cut(s)	96, 1606, 2611, 2801
BstYI	RGATCY	4 cut(s)	96, 1606, 2611, 2801
Bsu36I	CCTNAGG	1 cut(s)	2358
BsuRI	GGCC	6 cut(s)	73, 971, 1710, 2293, 2308, 2532
BtrI	CACGTC	1 cut(s)	1912
BtsCI	GGATG	9 cut(s)	369, 393, 572, 634, 2112, 2412, 2441, 2562, 2710
BtsI	GCAGTG	2 cut(s)	1206, 1455
BtsIMutI	CAGTG	7 cut(s)	274, 365, 1206, 1245, 1455, 1977, 2247
BveI	ACCTGC	1 cut(s)	545
Cac8I	GCNNGC	6 cut(s)	660, 912, 1519, 1582, 1939, 2534
CciI	TCATGA	1 cut(s)	1263
CfoI	GCGC	1 cut(s)	2131
Cfr10I	RCCGGY	1 cut(s)	1580
Cfr13I	GGNCC	5 cut(s)	79, 584, 803, 2363, 2572
CsiI	ACCWGGT	1 cut(s)	2710
Csp6I	GTAC	4 cut(s)	613, 796, 1186, 2372
CviAII	CATG	9 cut(s)	643, 838, 878, 1039, 1090, 1113, 1264, 1529, 1996
CviQI	GTAC	4 cut(s)	613, 796, 1186, 2372
DdeI	CTNAG	8 cut(s)	512, 1129, 1148, 1158, 1191, 2358, 2485, 2677
DraI	TTTAAA	1 cut(s)	379
EaeI	YGGCCR	2 cut(s)	969, 2306
Eam1104I	CTCTTC	3 cut(s)	496, 874, 1922
EarI	CTCTTC	3 cut(s)	496, 874, 1922
Ecl136II	GAGCTC	1 cut(s)	2482
Eco130I	CCWWGG	1 cut(s)	74
Eco147I	AGGCCT	1 cut(s)	2532
Eco24I	GRGCYC	1 cut(s)	2484
Eco31I	GGTCTC	1 cut(s)	1531
Eco32I	GATATC	2 cut(s)	1798, 2223
Eco47I	GGWCC	5 cut(s)	79, 584, 803, 2363, 2572
Eco53kI	GAGCTC	1 cut(s)	2482
Eco57I	CTGAAG	4 cut(s)	420, 1056, 1455, 2100
Eco81I	CCTNAGG	1 cut(s)	2358
Eco88I	CYCGRG	1 cut(s)	290
EcoICRI	GAGCTC	1 cut(s)	2482
EcoO109I	RGGNCCY	2 cut(s)	79, 2572
EcoRI	GAATTC	5 cut(s)	203, 860, 1395, 2235, 2789
EcoRII	CCWGG	2 cut(s)	2700, 2710
EcoRV	GATATC	2 cut(s)	1798, 2223
EcoT14I	CCWWGG	1 cut(s)	74
EcoT38I	GRGCYC	1 cut(s)	2484
ErhI	CCWWGG	1 cut(s)	74
FaeI	CATG	9 cut(s)	646, 841, 881, 1042, 1093, 1116, 1267, 1532, 1999
FalI	AAGNNNNNCTT	6 cut(s)	58, 90, 442, 474, 647, 679
FaqI	GGGAC	2 cut(s)	399, 570
FatI	CATG	9 cut(s)	642, 837, 877, 1038, 1089, 1112, 1263, 1528, 1995
FbaI	TGATCA	1 cut(s)	141
FblI	GTMKAC	4 cut(s)	739, 1675, 1882, 2665
Fnu4HI	GCNGC	6 cut(s)	753, 945, 960, 1197, 1962, 2621
FokI	GGATG	9 cut(s)	376, 380, 559, 641, 2119, 2419, 2448, 2549, 2717
FriOI	GRGCYC	1 cut(s)	2484
Fsp4HI	GCNGC	6 cut(s)	753, 945, 960, 1197, 1962, 2621
FspBI	CTAG	5 cut(s)	533, 1122, 2160, 2175, 2289
GlaI	GCGC	1 cut(s)	2130
GluI	GCNGC	6 cut(s)	753, 945, 960, 1197, 1962, 2621
GsuI	CTGGAG	3 cut(s)	1518, 1913, 2666
HaeII	RGCGCY	1 cut(s)	2132
HaeIII	GGCC	6 cut(s)	73, 971, 1710, 2293, 2308, 2532
HapII	CCGG	2 cut(s)	1581, 1892
HhaI	GCGC	1 cut(s)	2131
Hin1II	CATG	9 cut(s)	646, 841, 881, 1042, 1093, 1116, 1267, 1532, 1999
Hin6I	GCGC	1 cut(s)	2129
HinP1I	GCGC	1 cut(s)	2129
HincII	GTYRAC	2 cut(s)	1676, 2666
HindII	GTYRAC	2 cut(s)	1676, 2666
HindIII	AAGCTT	4 cut(s)	656, 1764, 2283, 2593
HpaII	CCGG	2 cut(s)	1581, 1892
HphI	GGTGA	5 cut(s)	827, 1215, 1906, 1975, 2197
Hpy166II	GTNNAC	7 cut(s)	740, 1188, 1666, 1676, 1883, 2448, 2666
Hpy188I	TCNGA	8 cut(s)	749, 1075, 1412, 1628, 1802, 2126, 2302, 2632
Hpy8I	GTNNAC	7 cut(s)	740, 1188, 1666, 1676, 1883, 2448, 2666
HpyCH4III	ACNGT	6 cut(s)	269, 976, 1294, 1552, 1789, 1981
HpyCH4IV	ACGT	3 cut(s)	843, 1911, 2337
HpyF10VI	GCNNNNNNNGC	8 cut(s)	452, 542, 551, 761, 968, 977, 1961, 2135
HpyF3I	CTNAG	8 cut(s)	512, 1129, 1148, 1158, 1191, 2358, 2485, 2677
HpySE526I	ACGT	3 cut(s)	843, 1911, 2337
Hsp92II	CATG	9 cut(s)	646, 841, 881, 1042, 1093, 1116, 1267, 1532, 1999
HspAI	GCGC	1 cut(s)	2129
KroI	GCCGGC	1 cut(s)	1580
KroNI	GCCGGC	1 cut(s)	1582
Ksp22I	TGATCA	1 cut(s)	141
LmnI	GCTCC	6 cut(s)	342, 471, 881, 1429, 1932, 2703
Lsp1109I	GCAGC	5 cut(s)	764, 931, 946, 1973, 2632
LweI	GCATC	6 cut(s)	581, 792, 1269, 1469, 2568, 2695
MabI	ACCWGGT	1 cut(s)	2710
MaeI	CTAG	5 cut(s)	533, 1122, 2160, 2175, 2289
MaeII	ACGT	3 cut(s)	843, 1911, 2337
MaeIII	GTNAC	6 cut(s)	25, 320, 1243, 1861, 1907, 1981
MflI	RGATCY	4 cut(s)	96, 1606, 2611, 2801
MhlI	GDGCHC	4 cut(s)	63, 727, 1929, 2484
MlsI	TGGCCA	2 cut(s)	971, 2308
MluNI	TGGCCA	2 cut(s)	971, 2308
MlyI	GAGTC	5 cut(s)	686, 1072, 1104, 1502, 2141
MmeI	TCCRAC	2 cut(s)	601, 835
Mox20I	TGGCCA	2 cut(s)	971, 2308
MroNI	GCCGGC	1 cut(s)	1580
MscI	TGGCCA	2 cut(s)	971, 2308
MslI	CAYNNNNRTG	2 cut(s)	358, 1265
Msp20I	TGGCCA	2 cut(s)	971, 2308
MspI	CCGG	2 cut(s)	1581, 1892
MspR9I	CCNGG	2 cut(s)	2702, 2712
MvaI	CCWGG	2 cut(s)	2702, 2712
MwoI	GCNNNNNNNGC	8 cut(s)	452, 542, 551, 761, 968, 977, 1961, 2135
NaeI	GCCGGC	1 cut(s)	1582
NgoMIV	GCCGGC	1 cut(s)	1580
NlaIII	CATG	9 cut(s)	646, 841, 881, 1042, 1093, 1116, 1267, 1532, 1999
NlaIV	GGNNCC	6 cut(s)	80, 586, 2268, 2364, 2574, 2613
NmeAIII	GCCGAG	2 cut(s)	706, 2722
NmuCI	GTSAC	4 cut(s)	25, 1861, 1907, 1981
NspI	RCATGY	3 cut(s)	646, 1532, 1999
NspV	TTCGAA	1 cut(s)	2774
PaeR7I	CTCGAG	1 cut(s)	290
PagI	TCATGA	1 cut(s)	1263
PaqCI	CACCTGC	1 cut(s)	545
PceI	AGGCCT	1 cut(s)	2532
PciI	ACATGT	3 cut(s)	642, 1528, 1995
PdiI	GCCGGC	1 cut(s)	1582
PflMI	CCANNNNNTGG	2 cut(s)	403, 812
PfoI	TCCNGGA	1 cut(s)	2700
PkrI	GCNGC	6 cut(s)	754, 946, 961, 1198, 1963, 2622
PleI	GAGTC	5 cut(s)	686, 1072, 1103, 1501, 2141
PpsI	GAGTC	5 cut(s)	686, 1072, 1103, 1501, 2141
PpuMI	RGGWCCY	2 cut(s)	79, 2572
PscI	ACATGT	3 cut(s)	642, 1528, 1995
Psp124BI	GAGCTC	1 cut(s)	2484
Psp5II	RGGWCCY	2 cut(s)	79, 2572
Psp6I	CCWGG	2 cut(s)	2700, 2710
PspGI	CCWGG	2 cut(s)	2700, 2710
PspN4I	GGNNCC	6 cut(s)	80, 586, 2268, 2364, 2574, 2613
PspPI	GGNCC	5 cut(s)	79, 584, 803, 2363, 2572
PspPPI	RGGWCCY	2 cut(s)	79, 2572
PspXI	VCTCGAGB	1 cut(s)	290
PstI	CTGCAG	2 cut(s)	2538, 2622
PsuI	RGATCY	4 cut(s)	96, 1606, 2611, 2801
RsaI	GTAC	4 cut(s)	614, 797, 1187, 2373
RsaNI	GTAC	4 cut(s)	613, 796, 1186, 2372
RseI	CAYNNNNRTG	2 cut(s)	358, 1265
SacI	GAGCTC	1 cut(s)	2484
SalI	GTCGAC	2 cut(s)	1674, 2664
SatI	GCNGC	6 cut(s)	753, 945, 960, 1197, 1962, 2621
Sau96I	GGNCC	5 cut(s)	79, 584, 803, 2363, 2572
SbfI	CCTGCAGG	1 cut(s)	2538
ScaI	AGTACT	1 cut(s)	797
SchI	GAGTC	5 cut(s)	686, 1072, 1104, 1502, 2141
ScrFI	CCNGG	2 cut(s)	2702, 2712
SdaI	CCTGCAGG	1 cut(s)	2538
SduI	GDGCHC	4 cut(s)	63, 727, 1929, 2484
SexAI	ACCWGGT	1 cut(s)	2710
SfaNI	GCATC	6 cut(s)	581, 792, 1269, 1469, 2568, 2695
SfcI	CTRYAG	2 cut(s)	2534, 2618
Sfr274I	CTCGAG	1 cut(s)	290
SfuI	TTCGAA	1 cut(s)	2774
SinI	GGWCC	5 cut(s)	79, 584, 803, 2363, 2572
SlaI	CTCGAG	1 cut(s)	290
SmiMI	CAYNNNNRTG	2 cut(s)	358, 1265
SmlI	CTYRAG	4 cut(s)	290, 1575, 2596, 2794
SmoI	CTYRAG	4 cut(s)	290, 1575, 2596, 2794
Sse8387I	CCTGCAGG	1 cut(s)	2538
SseBI	AGGCCT	1 cut(s)	2532
SsiI	CCGC	4 cut(s)	762, 1196, 2054, 2786
SspMI	CTAG	5 cut(s)	533, 1122, 2160, 2175, 2289
SstI	GAGCTC	1 cut(s)	2484
StuI	AGGCCT	1 cut(s)	2532
StyD4I	CCNGG	2 cut(s)	2700, 2710
StyI	CCWWGG	1 cut(s)	74
TaaI	ACNGT	6 cut(s)	269, 976, 1294, 1552, 1789, 1981
TaiI	ACGT	3 cut(s)	846, 1914, 2340
TatI	WGTACW	3 cut(s)	612, 795, 1185
TauI	GCSGC	1 cut(s)	1199
TscAI	CASTG	7 cut(s)	274, 365, 1206, 1245, 1462, 1984, 2254
TseFI	GTSAC	4 cut(s)	25, 1861, 1907, 1981
TseI	GCWGC	5 cut(s)	752, 944, 959, 1961, 2620
Tsp45I	GTSAC	4 cut(s)	25, 1861, 1907, 1981
TspGWI	ACGGA	1 cut(s)	1772
TspRI	CASTG	7 cut(s)	274, 365, 1206, 1245, 1462, 1984, 2254
Van91I	CCANNNNNTGG	2 cut(s)	403, 812
VpaK11BI	GGWCC	5 cut(s)	79, 584, 803, 2363, 2572
XceI	RCATGY	3 cut(s)	646, 1532, 1999
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1237, 2301
XhoI	CTCGAG	1 cut(s)	290
XmiI	GTMKAC	4 cut(s)	739, 1675, 1882, 2665
XspI	CTAG	5 cut(s)	533, 1122, 2160, 2175, 2289
ZrmI	AGTACT	1 cut(s)	797

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.