Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0001438

Physical Location & Seq

Genomic Coordinates Reverse (-)

3569825 .. 3573812

Gene Structure 3988 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g06080.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGGCCGCCACCGCCACCCCAACCCCGGAAAATGACGAAAAGACCCTCCAAGAGGAGCTCTCCCTCCCCATCCTCCTCGCGGATCGGGTCCTCAAATCGGCCCACGAGGCCGAGTCCTCCAAACCCGAATGCTCCGACCTGGCCCAACAAGTCGACCGCCTCTCCCACATGCTCCGCTCCGCCGTCCGCATCTGCGCCGCCTCCCCCTCCCTCTACGAGCGCCCCGTCCGCCGCATCGCCTCTGACGTCACCAAGAACCTCGACCGCGCCCTAACCCTAGTCCGCAAGTGCCGCCACAGCGGCGTCCTCCGCCAGGTCTTCTCCATCACCACCGCCGCAGACTTCCGCAAAGTCTCCAACCTCCTCGAATCCTCCATCGGCGACATGAAGTGGCTCCTCTCCGTCTTCGAGTCCGACGGCGCCAACCTCTCCCTGCCGCCGATCGCCAGCAACGACCCGATTCTCAGCTGGGTCTGGTCCTACATCGCCACCATCCAAATGGGCCAGCTCCGGGACCGAGTCGAGGCCGCGAGTTCGCTCGTCTCGCTGGCCAGGGACAACGACCGGAACAAGAAGATCATCGTCGACGAAGGCGGAGTGACGCCGCTGCTGAAGCTTTTGAAGGAGGGGTCGTCGCCGGAGGCGCAAGTTGCGGCGGCGAATGCTCTGTTTCATCTCGCTACGGATCGGGAGAGGGTTAGGATTGTTATAGATTTGAATGGGATTCCGATGATAGTTTCGGTGTTGGGAGACTCGCCGATGAGGGTTCAGGCGGCGGTGGTGAGACTGGTGGCGGAAATGGCGGAGCTTGACCCGATCGCGCAGGAGGAATTTGCTAGAGAAAATGTGACTAGGCCGTTGGTGTCTCTGTTGGCTATGGATACGGTTTTGGATGAGCCGAAACTGCAGATTGGTAAGCCTAGCATTCATTCGCTTGTGATTAGTAAGGAGTTGGTAGGAAAGGGTGCGAATTCGAGTAGTAGGTTGGGTTCGTTTAGTTCGAATCATTATAGTTCTGATGGGAGTAGCAGAGGTGGGCTGCATTATAGGAAAGAGAAGGAGAGAGAGGTTGAGAGCGCTGAGGTGAAGCTCAAGCTCAAGGTTGGTTGTGCCGAGGCATTGTGGAAGTTGTGTAGGGATTGTTTGTTGAATAGTCGGAAAGTTACAGAGACGAAAGGGTTGATTTGTTTGGCCAAGATTGTCGAGAAGGAAGTTGGGGAGTTGCAGCTTAATTGCTTGATGACTGTGATGGAAATAGCTGCAGTGGCTGAATCCAATCCGGAGCTTAGACGATCGGCTTTTAAGCCTAATTCTCCGGCTGCAAAGGCGGTTGTTGATCAGCTTATGAGAGTTATTCAAGAAGAGAGTAACCCGGATTTGCAGTTACCGGCAATCAAGGCAATTGGGTCGCTGGCAAGAACTTTTGCCGCAAGGGAAACCCGGATAGTTGGTCCTTTGGTTGCGCGGCTTGGTAATGAGAATGTGGATGTGGCAACCGAGGCTGCCATTGCATTGGGGAAGTTTGTGTGTTTGGAGAACTTCAACCGAGTAGAGCATTCTAAGACGATTATTGAGTTCGATGGGGTTCCTTCTCTAATGAGATTGTTGAGGTCCACTGATCGGATCAATGAAGTAGCTCACATGCACTGCTTAGTACTACTGTGTTACCTCACGTTGCACGTAGGCAATAGCAAAGCTCTCGAACAAGCACAGGTGTTGAGTACCCTCGAGGGGGGAGCGCGCTCTGCCGTGGCTCAGAATCCGGATTTAAAGGAGTTGTTTTTTAGAGCCATGCAGCATCTCAGTCTTTATCAGCCGGGAGCTCATCCCCACAGGCAAACCTACATGCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008156 GO:0008285 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0019219 GO:0019222 GO:0031261 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0032993 GO:0034641 GO:0034645 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

618

Amino Acids

67.72

Weight (kDa)

7.22

Isoelectric Point (pI)

35.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7792	PF25055	17 - 136	3.3e-50	Domain of unknown function (DUF7792)
ARM_PUB	PF25598	170 - 452	4.6e-06	Plant U-box protein ARM repeat region
Arm	PF00514	187 - 227	4e-06	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001438)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26600 AT3G26600
fragaria_vesca	FvH4_4g25480 FvH4_5g06080
malus_domestica	MD06G1167100.v1.1 MD13G1102400.v1.1 MD14G1172700.v1.1 MD16G1102800.v1.1
prunus_persica	Prupe.1G089500_v2.0.a1 Prupe.1G243400_v2.0.a1 Prupe.5G166900_v2.0.a1
pyrus_communis	pycom06g14970 pycom06g14980 pycom13g08950 pycom14g14410 pycom16g08740
rosa_chinensis	RchiOBHm_Chr4g0423211 RchiOBHm_Chr4g0432811 RchiOBHm_Chr7g0192761 RchiOBHm_Chr7g0218041
rosa_laevigata	RLG00000004331 RLG00000006810
rosa_multiflora	Rmu_co8276235.1_g000001 Rmu_sc0001516.1_g000053 Rmu_sc0004101.1_g000049 Rmu_sc0005234.1_g000003 Rmu_sc0008148.1_g000037
rosa_roxburghii	Rroxscaffold_2G00090530 Rroxscaffold_3G00262710 Rroxscaffold_5G00374250 Rroxscaffold_7G00212840
rosa_rugosa	Rorug04G0263100 Rorug07G0004500
rosa_samantha	Rh1AG125500 Rh2AG461900 Rh2CG448900 Rh4AG317200 Rh4AG322300 Rh4BG325400 Rh4CG340300 Rh4DG320600 Rh4DG326400 Rh5BG349900 Rh5CG383400 Rh7AG129500 Rh7AG315400 Rh7BG130800 Rh7CG061100 Rh7CG134200 Rh7DG131700
rosa_wichuraiana	Rw4G027590 Rw7G011080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	249
AbsI	CCTCGAGG	1 cut(s)	1727
AccB1I	GGYRCC	1 cut(s)	419
AccBSI	CCGCTC	1 cut(s)	177
AccI	GTMKAC	2 cut(s)	153, 585
AccII	CGCG	6 cut(s)	80, 267, 530, 821, 1465, 1741
AccIII	TCCGGA	2 cut(s)	1279, 1762
AclWI	GGATC	3 cut(s)	90, 693, 1631
AcoI	YGGCCR	3 cut(s)	3, 549, 1191
AcsI	RAATTY	2 cut(s)	830, 970
AcuI	CTGAAG	1 cut(s)	632
AcyI	GRCGYC	4 cut(s)	246, 303, 420, 602
AfaI	GTAC	2 cut(s)	1656, 1723
AfeI	AGCGCT	1 cut(s)	1078
AgsI	TTSAA	5 cut(s)	622, 718, 1150, 1358, 1543
AjnI	CCWGG	3 cut(s)	138, 312, 551
Alw21I	GWGCWC	2 cut(s)	60, 1825
Alw26I	GTCTC	6 cut(s)	358, 547, 744, 778, 870, 1163
AlwI	GGATC	3 cut(s)	90, 693, 1631
AlwNI	CAGNNNCTG	1 cut(s)	1268
Ama87I	CYCGRG	1 cut(s)	1727
Aor13HI	TCCGGA	2 cut(s)	1279, 1762
Aor51HI	AGCGCT	1 cut(s)	1078
AoxI	GGCC	9 cut(s)	3, 99, 108, 141, 502, 525, 549, 854, 1191
ApeKI	GCWGC	7 cut(s)	607, 1039, 1225, 1259, 1319, 1502, 1795
ApoI	RAATTY	2 cut(s)	830, 970
AspS9I	GGNCC	8 cut(s)	88, 100, 142, 477, 502, 514, 1451, 1611
AsuC2I	CCSGG	5 cut(s)	26, 512, 1373, 1441, 1818
AsuHPI	GGTGA	4 cut(s)	241, 319, 793, 1096
AsuII	TTCGAA	1 cut(s)	1001
AvaI	CYCGRG	1 cut(s)	1727
AvaII	GGWCC	5 cut(s)	88, 477, 514, 1451, 1611
BalI	TGGCCA	2 cut(s)	551, 1193
BanI	GGYRCC	1 cut(s)	419
BanII	GRGCYC	2 cut(s)	60, 1825
BauI	CACGAG	1 cut(s)	104
BbsI	GAAGAC	2 cut(s)	310, 397
Bbv12I	GWGCWC	2 cut(s)	60, 1825
BbvCI	CCTCAGC	1 cut(s)	1080
BbvI	GCAGC	7 cut(s)	594, 1026, 1237, 1246, 1306, 1489, 1807
BccI	CCATC	7 cut(s)	77, 332, 383, 500, 1013, 1243, 1574
BceAI	ACGGC	4 cut(s)	167, 433, 841, 1733
BcgI	CGANNNNNNTGC	4 cut(s)	1389, 1423, 1681, 1715
BciT130I	CCWGG	3 cut(s)	140, 314, 553
BciVI	GTATCC	1 cut(s)	874
BclI	TGATCA	1 cut(s)	1336
BcnI	CCSGG	5 cut(s)	26, 512, 1373, 1441, 1818
BcoDI	GTCTC	6 cut(s)	358, 547, 744, 778, 870, 1163
BfaI	CTAG	4 cut(s)	278, 837, 852, 921
BfmI	CTRYAG	2 cut(s)	905, 1260
BfoI	RGCGCY	3 cut(s)	223, 423, 1080
BfuI	GTATCC	1 cut(s)	874
BglI	GCCNNNNNGGC	2 cut(s)	107, 300
BmcAI	AGTACT	1 cut(s)	1656
Bme1390I	CCNGG	8 cut(s)	26, 140, 314, 512, 553, 1373, 1441, 1818
Bme18I	GGWCC	5 cut(s)	88, 477, 514, 1451, 1611
BmeT110I	CYCGRG	1 cut(s)	1727
BmgT120I	GGNCC	8 cut(s)	88, 100, 142, 477, 502, 514, 1451, 1611
BmiI	GGNNCC	5 cut(s)	89, 395, 421, 515, 1587
BmrFI	CCNGG	8 cut(s)	26, 140, 314, 512, 553, 1373, 1441, 1818
BmsI	GCATC	3 cut(s)	198, 243, 1807
BpiI	GAAGAC	2 cut(s)	310, 397
BplI	GAGNNNNNCTC	2 cut(s)	44, 76
Bpu10I	CCTNAGC	1 cut(s)	1080
Bpu14I	TTCGAA	1 cut(s)	1001
BpuEI	CTTGAG	2 cut(s)	1076, 1082
BpuMI	CCSGG	5 cut(s)	26, 512, 1373, 1441, 1818
BsaAI	YACGTR	1 cut(s)	1681
BsaHI	GRCGYC	4 cut(s)	246, 303, 420, 602
BsaJI	CCNNGG	5 cut(s)	24, 552, 1113, 1497, 1749
BsaWI	WCCGGW	3 cut(s)	564, 1279, 1762
BsaXI	ACNNNNNCTCC	4 cut(s)	146, 176, 617, 647
Bse118I	RCCGGY	1 cut(s)	1387
Bse1I	ACTGG	1 cut(s)	792
Bse3DI	GCAATG	1 cut(s)	1506
BseAI	TCCGGA	2 cut(s)	1279, 1762
BseBI	CCWGG	3 cut(s)	140, 314, 553
BseDI	CCNNGG	5 cut(s)	24, 552, 1113, 1497, 1749
BseGI	GGATG	5 cut(s)	69, 492, 898, 1492, 1825
BseMI	GCAATG	1 cut(s)	1506
BseMII	CTCAG	4 cut(s)	478, 1071, 1769, 1816
BseNI	ACTGG	1 cut(s)	792
BsePI	GCGCGC	1 cut(s)	1739
BseRI	GAGGAG	4 cut(s)	65, 68, 353, 386
BseXI	GCAGC	7 cut(s)	594, 1026, 1237, 1246, 1306, 1489, 1807
BseYI	CCCAGC	1 cut(s)	468
Bsh1236I	CGCG	6 cut(s)	80, 267, 530, 821, 1465, 1741
Bsh1285I	CGRYCG	6 cut(s)	157, 265, 444, 565, 819, 1295
BshFI	GGCC	9 cut(s)	5, 101, 110, 143, 504, 527, 551, 856, 1193
BshNI	GGYRCC	1 cut(s)	419
BsiEI	CGRYCG	6 cut(s)	157, 265, 444, 565, 819, 1295
BsiHKAI	GWGCWC	2 cut(s)	60, 1825
BsiHKCI	CYCGRG	1 cut(s)	1727
BslFI	GGGAC	2 cut(s)	527, 569
BsmAI	GTCTC	6 cut(s)	358, 547, 744, 778, 870, 1163
BsmBI	CGTCTC	2 cut(s)	547, 1163
BsmFI	GGGAC	2 cut(s)	527, 569
BsmI	GAATGC	4 cut(s)	134, 667, 924, 1555
BsnI	GGCC	9 cut(s)	5, 101, 110, 143, 504, 527, 551, 856, 1193
BsoBI	CYCGRG	1 cut(s)	1727
Bsp119I	TTCGAA	1 cut(s)	1001
Bsp1286I	GDGCHC	2 cut(s)	60, 1825
Bsp13I	TCCGGA	2 cut(s)	1279, 1762
Bsp143I	GATC	9 cut(s)	82, 441, 576, 685, 816, 1292, 1336, 1618, 1623
BspANI	GGCC	9 cut(s)	5, 101, 110, 143, 504, 527, 551, 856, 1193
BspCNI	CTCAG	4 cut(s)	477, 1072, 1768, 1815
BspEI	TCCGGA	2 cut(s)	1279, 1762
BspFNI	CGCG	6 cut(s)	80, 267, 530, 821, 1465, 1741
BspLI	GGNNCC	5 cut(s)	89, 395, 421, 515, 1587
BspMAI	CTGCAG	2 cut(s)	909, 1264
BspPI	GGATC	3 cut(s)	90, 693, 1631
BspT104I	TTCGAA	1 cut(s)	1001
BspT107I	GGYRCC	1 cut(s)	419
BsrBI	CCGCTC	1 cut(s)	177
BsrDI	GCAATG	1 cut(s)	1506
BsrFI	RCCGGY	1 cut(s)	1387
BsrI	ACTGG	1 cut(s)	792
BssAI	RCCGGY	1 cut(s)	1387
BssECI	CCNNGG	5 cut(s)	24, 552, 1113, 1497, 1749
BssHII	GCGCGC	1 cut(s)	1739
BssMI	GATC	9 cut(s)	82, 441, 576, 685, 816, 1292, 1336, 1618, 1623
BssNI	GRCGYC	4 cut(s)	246, 303, 420, 602
BssSI	CACGAG	1 cut(s)	104
Bst2BI	CACGAG	1 cut(s)	104
Bst2UI	CCWGG	3 cut(s)	140, 314, 553
Bst4CI	ACNGT	3 cut(s)	886, 1246, 1662
Bst6I	CTCTTC	1 cut(s)	1356
BstACI	GRCGYC	4 cut(s)	246, 303, 420, 602
BstBAI	YACGTR	1 cut(s)	1681
BstBI	TTCGAA	1 cut(s)	1001
BstC8I	GCNNGC	5 cut(s)	448, 506, 549, 1413, 1741
BstDEI	CTNAG	7 cut(s)	464, 1080, 1286, 1560, 1651, 1755, 1802
BstDSI	CCRYGG	1 cut(s)	1749
BstENI	CCTNNNNNAGG	2 cut(s)	50, 311
BstF5I	GGATG	5 cut(s)	69, 492, 898, 1492, 1825
BstFNI	CGCG	6 cut(s)	80, 267, 530, 821, 1465, 1741
BstH2I	RGCGCY	3 cut(s)	223, 423, 1080
BstKTI	GATC	9 cut(s)	85, 444, 579, 688, 819, 1295, 1339, 1621, 1626
BstMAI	GTCTC	6 cut(s)	358, 547, 744, 778, 870, 1163
BstMBI	GATC	9 cut(s)	82, 441, 576, 685, 816, 1292, 1336, 1618, 1623
BstMCI	CGRYCG	6 cut(s)	157, 265, 444, 565, 819, 1295
BstNI	CCWGG	3 cut(s)	140, 314, 553
BstNSI	RCATGY	3 cut(s)	172, 1645, 1849
BstSCI	CCNGG	8 cut(s)	24, 138, 312, 510, 551, 1371, 1439, 1816
BstSFI	CTRYAG	2 cut(s)	905, 1260
BstUI	CGCG	6 cut(s)	80, 267, 530, 821, 1465, 1741
BstV1I	GCAGC	7 cut(s)	594, 1026, 1237, 1246, 1306, 1489, 1807
BstV2I	GAAGAC	2 cut(s)	310, 397
BstXI	CCANNNNNNTGG	2 cut(s)	499, 1513
BsuI	GTATCC	1 cut(s)	874
BsuRI	GGCC	9 cut(s)	5, 101, 110, 143, 504, 527, 551, 856, 1193
BtgI	CCRYGG	1 cut(s)	1749
BtgZI	GCGATG	2 cut(s)	220, 469
BtsCI	GGATG	5 cut(s)	69, 492, 898, 1492, 1825
BtsI	GCAGTG	2 cut(s)	1269, 1645
BtsIMutI	CAGTG	3 cut(s)	1269, 1614, 1645
Cac8I	GCNNGC	5 cut(s)	448, 506, 549, 1413, 1741
CaiI	CAGNNNCTG	1 cut(s)	1268
Cfr10I	RCCGGY	1 cut(s)	1387
Cfr13I	GGNCC	8 cut(s)	88, 100, 142, 477, 502, 514, 1451, 1611
CseI	GACGC	2 cut(s)	292, 610
Csp6I	GTAC	2 cut(s)	1655, 1722
CviAII	CATG	5 cut(s)	169, 385, 1642, 1792, 1846
CviQI	GTAC	2 cut(s)	1655, 1722
DdeI	CTNAG	7 cut(s)	464, 1080, 1286, 1560, 1651, 1755, 1802
DinI	GGCGCC	1 cut(s)	421
DpnI	GATC	9 cut(s)	84, 443, 578, 687, 818, 1294, 1338, 1620, 1625
DpnII	GATC	9 cut(s)	82, 441, 576, 685, 816, 1292, 1336, 1618, 1623
DraI	TTTAAA	1 cut(s)	1770
EaeI	YGGCCR	3 cut(s)	3, 549, 1191
Eam1104I	CTCTTC	1 cut(s)	1356
EarI	CTCTTC	1 cut(s)	1356
EciI	GGCGGA	6 cut(s)	169, 218, 299, 609, 809, 818
Ecl136II	GAGCTC	2 cut(s)	58, 1823
Eco24I	GRGCYC	2 cut(s)	60, 1825
Eco47I	GGWCC	5 cut(s)	88, 477, 514, 1451, 1611
Eco47III	AGCGCT	1 cut(s)	1078
Eco53kI	GAGCTC	2 cut(s)	58, 1823
Eco57I	CTGAAG	1 cut(s)	632
Eco88I	CYCGRG	1 cut(s)	1727
EcoICRI	GAGCTC	2 cut(s)	58, 1823
EcoNI	CCTNNNNNAGG	2 cut(s)	50, 311
EcoO109I	RGGNCCY	1 cut(s)	88
EcoRI	GAATTC	1 cut(s)	970
EcoRII	CCWGG	3 cut(s)	138, 312, 551
EcoT38I	GRGCYC	2 cut(s)	60, 1825
EgeI	GGCGCC	1 cut(s)	421
EheI	GGCGCC	1 cut(s)	421
Esp3I	CGTCTC	2 cut(s)	547, 1163
FaeI	CATG	5 cut(s)	172, 388, 1645, 1795, 1849
FaqI	GGGAC	2 cut(s)	527, 569
FatI	CATG	5 cut(s)	168, 384, 1641, 1791, 1845
FbaI	TGATCA	1 cut(s)	1336
FblI	GTMKAC	2 cut(s)	153, 585
FokI	GGATG	5 cut(s)	56, 479, 905, 1499, 1812
FriOI	GRGCYC	2 cut(s)	60, 1825
FspBI	CTAG	4 cut(s)	278, 837, 852, 921
GsaI	CCCAGC	1 cut(s)	472
HaeII	RGCGCY	3 cut(s)	223, 423, 1080
HaeIII	GGCC	9 cut(s)	5, 101, 110, 143, 504, 527, 551, 856, 1193
HgaI	GACGC	2 cut(s)	292, 610
Hin1I	GRCGYC	4 cut(s)	246, 303, 420, 602
Hin1II	CATG	5 cut(s)	172, 388, 1645, 1795, 1849
HincII	GTYRAC	2 cut(s)	154, 586
HindII	GTYRAC	2 cut(s)	154, 586
HindIII	AAGCTT	1 cut(s)	614
HphI	GGTGA	4 cut(s)	241, 319, 793, 1096
Hpy166II	GTNNAC	3 cut(s)	154, 586, 1614
Hpy188I	TCNGA	8 cut(s)	136, 244, 415, 729, 1018, 1158, 1623, 1758
Hpy188III	TCNNGA	6 cut(s)	689, 1204, 1280, 1358, 1700, 1763
Hpy8I	GTNNAC	3 cut(s)	154, 586, 1614
Hpy99I	CGWCG	4 cut(s)	419, 587, 590, 637
HpyAV	CCTTC	5 cut(s)	584, 616, 1051, 1201, 1599
HpyCH4III	ACNGT	3 cut(s)	886, 1246, 1662
HpyCH4IV	ACGT	3 cut(s)	246, 1673, 1680
HpyF3I	CTNAG	7 cut(s)	464, 1080, 1286, 1560, 1651, 1755, 1802
HpySE526I	ACGT	3 cut(s)	246, 1673, 1680
Hsp92I	GRCGYC	4 cut(s)	246, 303, 420, 602
Hsp92II	CATG	5 cut(s)	172, 388, 1645, 1795, 1849
KasI	GGCGCC	1 cut(s)	419
Kpn2I	TCCGGA	2 cut(s)	1279, 1762
Ksp22I	TGATCA	1 cut(s)	1336
Kzo9I	GATC	9 cut(s)	82, 441, 576, 685, 816, 1292, 1336, 1618, 1623
Lsp1109I	GCAGC	7 cut(s)	594, 1026, 1237, 1246, 1306, 1489, 1807
LweI	GCATC	3 cut(s)	198, 243, 1807
MaeI	CTAG	4 cut(s)	278, 837, 852, 921
MaeII	ACGT	3 cut(s)	246, 1673, 1680
MaeIII	GTNAC	7 cut(s)	247, 598, 847, 1162, 1367, 1383, 1664
MalI	GATC	9 cut(s)	84, 443, 578, 687, 818, 1294, 1338, 1620, 1625
MbiI	CCGCTC	1 cut(s)	177
MboI	GATC	9 cut(s)	82, 441, 576, 685, 816, 1292, 1336, 1618, 1623
MboII	GAAGA	4 cut(s)	310, 397, 586, 1373
MfeI	CAATTG	1 cut(s)	1401
MhlI	GDGCHC	2 cut(s)	60, 1825
MlsI	TGGCCA	2 cut(s)	551, 1193
MluCI	AATT	5 cut(s)	830, 970, 1231, 1309, 1401
MluNI	TGGCCA	2 cut(s)	551, 1193
Mly113I	GGCGCC	1 cut(s)	420
MlyI	GAGTC	4 cut(s)	122, 419, 528, 746
MmeI	TCCRAC	4 cut(s)	159, 381, 438, 1136
Mox20I	TGGCCA	2 cut(s)	551, 1193
MroI	TCCGGA	2 cut(s)	1279, 1762
MscI	TGGCCA	2 cut(s)	551, 1193
MseI	TTAA	3 cut(s)	1230, 1302, 1769
MslI	CAYNNNNRTG	1 cut(s)	497
Msp20I	TGGCCA	2 cut(s)	551, 1193
MspA1I	CMGCKG	3 cut(s)	300, 468, 607
MspR9I	CCNGG	8 cut(s)	26, 140, 314, 512, 553, 1373, 1441, 1818
MunI	CAATTG	1 cut(s)	1401
Mva1269I	GAATGC	4 cut(s)	134, 667, 924, 1555
MvaI	CCWGG	3 cut(s)	140, 314, 553
MvnI	CGCG	6 cut(s)	80, 267, 530, 821, 1465, 1741
NarI	GGCGCC	1 cut(s)	420
NciI	CCSGG	5 cut(s)	26, 512, 1373, 1441, 1818
NdeII	GATC	9 cut(s)	82, 441, 576, 685, 816, 1292, 1336, 1618, 1623
NlaIII	CATG	5 cut(s)	172, 388, 1645, 1795, 1849
NlaIV	GGNNCC	5 cut(s)	89, 395, 421, 515, 1587
NmeAIII	GCCGAG	2 cut(s)	136, 1138
NmuCI	GTSAC	3 cut(s)	247, 598, 847
NspI	RCATGY	3 cut(s)	172, 1645, 1849
NspV	TTCGAA	1 cut(s)	1001
PaeR7I	CTCGAG	1 cut(s)	1727
PauI	GCGCGC	1 cut(s)	1739
PcsI	WCGNNNNNNNCGW	4 cut(s)	222, 243, 450, 998
PctI	GAATGC	4 cut(s)	134, 667, 924, 1555
PfeI	GAWTC	6 cut(s)	368, 460, 724, 1003, 1271, 1759
PflFI	GACNNNGTC	1 cut(s)	518
PfoI	TCCNGGA	1 cut(s)	510
Ple19I	CGATCG	3 cut(s)	444, 819, 1295
PleI	GAGTC	4 cut(s)	121, 418, 527, 746
PluTI	GGCGCC	1 cut(s)	423
PpsI	GAGTC	4 cut(s)	121, 418, 527, 746
Ppu21I	YACGTR	1 cut(s)	1681
PpuMI	RGGWCCY	1 cut(s)	88
Psp124BI	GAGCTC	2 cut(s)	60, 1825
Psp5II	RGGWCCY	1 cut(s)	88
Psp6I	CCWGG	3 cut(s)	138, 312, 551
PspFI	CCCAGC	1 cut(s)	468
PspGI	CCWGG	3 cut(s)	138, 312, 551
PspN4I	GGNNCC	5 cut(s)	89, 395, 421, 515, 1587
PspPI	GGNCC	8 cut(s)	88, 100, 142, 477, 502, 514, 1451, 1611
PspPPI	RGGWCCY	1 cut(s)	88
PspXI	VCTCGAGB	1 cut(s)	1727
PsrI	GAACNNNNNNTAC	2 cut(s)	973, 1005
PstI	CTGCAG	2 cut(s)	909, 1264
PstNI	CAGNNNCTG	1 cut(s)	1268
PsyI	GACNNNGTC	1 cut(s)	518
PteI	GCGCGC	1 cut(s)	1739
PvuI	CGATCG	3 cut(s)	444, 819, 1295
PvuII	CAGCTG	1 cut(s)	468
RsaI	GTAC	2 cut(s)	1656, 1723
RsaNI	GTAC	2 cut(s)	1655, 1722
RseI	CAYNNNNRTG	1 cut(s)	497
SacI	GAGCTC	2 cut(s)	60, 1825
SalI	GTCGAC	2 cut(s)	152, 584
SaqAI	TTAA	3 cut(s)	1230, 1302, 1769
Sau3AI	GATC	9 cut(s)	82, 441, 576, 685, 816, 1292, 1336, 1618, 1623
Sau96I	GGNCC	8 cut(s)	88, 100, 142, 477, 502, 514, 1451, 1611
ScaI	AGTACT	1 cut(s)	1656
SchI	GAGTC	4 cut(s)	122, 419, 528, 746
ScrFI	CCNGG	8 cut(s)	26, 140, 314, 512, 553, 1373, 1441, 1818
SduI	GDGCHC	2 cut(s)	60, 1825
SfaNI	GCATC	3 cut(s)	198, 243, 1807
SfcI	CTRYAG	2 cut(s)	905, 1260
SfiI	GGCCNNNNNGGCC	1 cut(s)	107
SfoI	GGCGCC	1 cut(s)	421
Sfr274I	CTCGAG	1 cut(s)	1727
SfuI	TTCGAA	1 cut(s)	1001
SgrDI	CGTCGACG	1 cut(s)	584
SinI	GGWCC	5 cut(s)	88, 477, 514, 1451, 1611
SlaI	CTCGAG	1 cut(s)	1727
SmiMI	CAYNNNNRTG	1 cut(s)	497
SmlI	CTYRAG	3 cut(s)	1091, 1097, 1727
SmoI	CTYRAG	3 cut(s)	1091, 1097, 1727
Sse9I	AATT	5 cut(s)	830, 970, 1231, 1309, 1401
SspDI	GGCGCC	1 cut(s)	419
SspMI	CTAG	4 cut(s)	278, 837, 852, 921
SstI	GAGCTC	2 cut(s)	60, 1825
StyD4I	CCNGG	8 cut(s)	24, 138, 312, 510, 551, 1371, 1439, 1816
TaaI	ACNGT	3 cut(s)	886, 1246, 1662
TaiI	ACGT	3 cut(s)	249, 1676, 1683
TaqII	GACCGA	1 cut(s)	531
TasI	AATT	5 cut(s)	830, 970, 1231, 1309, 1401
TatI	WGTACW	1 cut(s)	1654
TfiI	GAWTC	6 cut(s)	368, 460, 724, 1003, 1271, 1759
Tru1I	TTAA	3 cut(s)	1230, 1302, 1769
Tru9I	TTAA	3 cut(s)	1230, 1302, 1769
TscAI	CASTG	3 cut(s)	1269, 1621, 1652
TseFI	GTSAC	3 cut(s)	247, 598, 847
TseI	GCWGC	7 cut(s)	607, 1039, 1225, 1259, 1319, 1502, 1795
Tsp45I	GTSAC	3 cut(s)	247, 598, 847
TspDTI	ATGAA	4 cut(s)	401, 662, 917, 1644
TspGWI	ACGGA	2 cut(s)	391, 698
TspRI	CASTG	3 cut(s)	1269, 1621, 1652
Tth111I	GACNNNGTC	1 cut(s)	518
VpaK11BI	GGWCC	5 cut(s)	88, 477, 514, 1451, 1611
XagI	CCTNNNNNAGG	2 cut(s)	50, 311
XapI	RAATTY	2 cut(s)	830, 970
XceI	RCATGY	3 cut(s)	172, 1645, 1849
XcmI	CCANNNNNNNNNTGG	1 cut(s)	496
XhoI	CTCGAG	1 cut(s)	1727
XmiI	GTMKAC	2 cut(s)	153, 585
XspI	CTAG	4 cut(s)	278, 837, 852, 921
ZraI	GACGTC	1 cut(s)	247
ZrmI	AGTACT	1 cut(s)	1656

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.