Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001438

Physical Location & Seq

Genomic Coordinates Forward (+)

11138361 .. 11140647

Gene Structure 2287 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17233

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGGATGACGAAAAGACCCTCCAAGAGGAGCTGTGCCTCCCCATCCTCCTCGCGGATCGGGTGCTCAAGTCGGCCCACGAGGCCGAGTCGTCCAAGCTCGAGTGCGCCGACCTGGCCCACCAAGTCGACCGCCTCTCCCAGATGCTCCGATCCGCCGTCCGCATCGCCGCCGCCTCCCCCTCCCTCTACGAGCGCCCCGTCCGACGCATCGCGGCCGACGTGGCCAAGAACCTGGACCGCGCGCTCACCCTGGTCCGCAAGTGCAAGCACAGCGGCGTCCTCCGGCAGGTCTTCTCCATCACCACCGCGGCCGACTTCCGCAAGGTGTCGAGCCTCCTCGAGTCGTCGATCGGCGACATGAAGTGGCTCCTGTCGGTGTTCGAGTCGGACGGCGCGAACCTCTCCCTGCCGCCCATCGCGAGCAACGACCCGATTCTGAGCTGGGTGTGGTCCTACATCGCGACCATTCAGATGGGTCAGCTCCGGGACCGAGTGGAGGCGGCGAGTTCGCTCGTCTCGCTGGCGAGGGACAACGACCGGAACAAGAAGATAATTGTTGACGAGGGAGGAGTGACGCCGCTGCTCAAGCTTCTGAAGGAGGGGTCTTCGGCGGAGGCACAGATTGCTGCGGCGAATGCTCTGTTTCATATCGCTACGGACCAGGAGAGGGTTCGGACTGTGATCGAGTTGAATGGGATTCCGATGATAGTTTCGGTTTTGGGGGATTCGCCGATGAGGGTTCAGGCGGCGGTGGTGAGATTGGTGGCGGAAATGGCGGAGCTTGACCCTATTGCGCAGGTGGACTTTGCCAGAGAAAATGTGACTAGGCCGTTGGTGTCTCTGTTGGCTATGGATACGGTTCTGGATGAGCCGAAACCGCAGCCGGGTAAGCCCAGCATTCATTCGCTTGTGATTAATAAGGAGTTGGTAGGAAAGGGGGCGAATTCGAGTACTAGGTTGGGGTCCTTTAGTTCGAATCATTATCATTCTGATGGGAGTAGTAGAGGCGGGCATTATAGGAAAGATAGGGAGAGAGAGGTTGAGAGCCCTGAGGTCAAGCTCAACCTCAAGGTTGGTTGTGCTGAGGCATTGTGGAAGTTGTGTAGAGCTTGTTTGTTGAATAGTCGAAAAGTTACAGAGACTAAAGGGTTGATTTGTTTGGCCAAGATTGTTCACAAGGAGGTTGGGGAATTGCAGCTTAATTGCTTGATGACTGTGATGGAAATAGCTGCAGTGGCAGAGTCAAATCCAGAGCTTAGACGATCGGCTTTTAAGCCCAACTCTCCGGCTGCAAAGGCAGTTGTCGATCAGCTTATGAGGGTTATTCAAGAAGAGGGCAACCCGGATCTGCAAATACCGGCAATCAAGGCAATTGGGTCACTCGCAAGAACTTTTGCCGCCAGGGAAACCCGGATAGTTGGTCCTTTGGTTGCGCGGCTGGGTAATGTGAATGTGGATGTGGCAACTGAGGCTGCCATTGCATTGGGAAAGTTTGTGTGCTTGGAGAACTTCAACCGAGTAGAGCATTCCAAGACGATAATTGAGTTCAATGGGGTTCCTTCTCTGATGAGATTGTTGAAGGCTACTGATCGGACCAACGAACTTGCTCACTTGCACTGCCTAGAACTATTATGTTACCTCGCATTGCACGTAGGCAATAGCAAAGCTCTCGAACAAGCACAGGTGTTGAGTACTCTCGAGGGGGAGCTCGTTCTGCTGTGGCACAAAATCCAGATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008156 GO:0008285 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0019219 GO:0019222 GO:0031261 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0032993 GO:0034641 GO:0034645 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

579

Amino Acids

63.43

Weight (kDa)

7.22

Isoelectric Point (pI)

33.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7792	PF25055	8 - 127	6.4e-50	Domain of unknown function (DUF7792)
ARM_PUB	PF25598	161 - 441	5.5e-06	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001438)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26600 AT3G26600
fragaria_vesca	FvH4_4g25480 FvH4_5g06080
malus_domestica	MD06G1167100.v1.1 MD13G1102400.v1.1 MD14G1172700.v1.1 MD16G1102800.v1.1
prunus_persica	Prupe.1G089500_v2.0.a1 Prupe.1G243400_v2.0.a1 Prupe.5G166900_v2.0.a1
pyrus_communis	pycom06g14970 pycom06g14980 pycom13g08950 pycom14g14410 pycom16g08740
rosa_chinensis	RchiOBHm_Chr4g0423211 RchiOBHm_Chr4g0432811 RchiOBHm_Chr7g0192761 RchiOBHm_Chr7g0218041
rosa_laevigata	RLG00000004331 RLG00000006810
rosa_multiflora	Rmu_co8276235.1_g000001 Rmu_sc0001516.1_g000053 Rmu_sc0004101.1_g000049 Rmu_sc0005234.1_g000003 Rmu_sc0008148.1_g000037
rosa_roxburghii	Rroxscaffold_2G00090530 Rroxscaffold_3G00262710 Rroxscaffold_5G00374250 Rroxscaffold_7G00212840
rosa_rugosa	Rorug04G0263100 Rorug07G0004500
rosa_samantha	Rh1AG125500 Rh2AG461900 Rh2CG448900 Rh4AG317200 Rh4AG322300 Rh4BG325400 Rh4CG340300 Rh4DG320600 Rh4DG326400 Rh5BG349900 Rh5CG383400 Rh7AG129500 Rh7AG315400 Rh7BG130800 Rh7CG061100 Rh7CG134200 Rh7DG131700
rosa_wichuraiana	Rw4G027590 Rw7G011080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	787
Acc16I	TGCGCA	1 cut(s)	795
Acc36I	ACCTGC	2 cut(s)	277, 787
AccI	GTMKAC	1 cut(s)	126
AccII	CGCG	9 cut(s)	53, 212, 240, 242, 308, 395, 419, 461, 1435
AclWI	GGATC	3 cut(s)	63, 144, 1353
AcoI	YGGCCR	4 cut(s)	213, 222, 309, 1161
AcsI	RAATTY	1 cut(s)	943
AcuI	CTGAAG	1 cut(s)	614
AcyI	GRCGYC	2 cut(s)	276, 575
AfaI	GTAC	2 cut(s)	952, 1693
AfiI	CCNNNNNNNGG	6 cut(s)	25, 52, 286, 496, 667, 884
AgsI	TTSAA	6 cut(s)	691, 1120, 1328, 1513, 1549, 1579
AjiI	CACGTC	1 cut(s)	220
AjnI	CCWGG	5 cut(s)	111, 231, 249, 660, 1400
Alw21I	GWGCWC	2 cut(s)	66, 1710
Alw26I	GTCTC	3 cut(s)	520, 843, 1133
AlwI	GGATC	3 cut(s)	63, 144, 1353
Ama87I	CYCGRG	3 cut(s)	98, 338, 1697
AoxI	GGCC	8 cut(s)	72, 81, 114, 213, 222, 309, 827, 1161
ApeKI	GCWGC	7 cut(s)	580, 626, 880, 1195, 1229, 1289, 1472
ApoI	RAATTY	1 cut(s)	943
AseI	ATTAAT	1 cut(s)	915
AspLEI	GCGC	7 cut(s)	107, 195, 242, 244, 395, 796, 1435
AsuC2I	CCSGG	4 cut(s)	485, 885, 1343, 1411
AsuHPI	GGTGA	3 cut(s)	238, 292, 766
AsuII	TTCGAA	1 cut(s)	974
AvaI	CYCGRG	3 cut(s)	98, 338, 1697
AvaII	GGWCC	8 cut(s)	235, 253, 450, 487, 658, 963, 1421, 1593
AxyI	CCTNAGG	1 cut(s)	1050
BalI	TGGCCA	2 cut(s)	224, 1163
BanII	GRGCYC	2 cut(s)	1049, 1710
BauI	CACGAG	1 cut(s)	77
BbsI	GAAGAC	2 cut(s)	283, 597
Bbv12I	GWGCWC	2 cut(s)	66, 1710
BbvCI	CCTCAGC	1 cut(s)	1083
BbvI	GCAGC	7 cut(s)	567, 613, 892, 1207, 1216, 1276, 1459
BccI	CCATC	6 cut(s)	50, 305, 422, 466, 986, 1213
BceAI	ACGGC	3 cut(s)	140, 406, 814
BcgI	CGANNNNNNTGC	2 cut(s)	1651, 1685
BciT130I	CCWGG	5 cut(s)	113, 233, 251, 662, 1402
BciVI	GTATCC	1 cut(s)	847
BcnI	CCSGG	4 cut(s)	485, 885, 1343, 1411
BcoDI	GTCTC	3 cut(s)	520, 843, 1133
BfaI	CTAG	3 cut(s)	825, 954, 1622
BfmI	CTRYAG	1 cut(s)	1230
BfoI	RGCGCY	1 cut(s)	196
BfuAI	ACCTGC	2 cut(s)	277, 787
BfuI	GTATCC	1 cut(s)	847
BglI	GCCNNNNNGGC	3 cut(s)	80, 113, 221
BmcAI	AGTACT	2 cut(s)	952, 1693
Bme1390I	CCNGG	9 cut(s)	113, 233, 251, 485, 662, 885, 1343, 1402, 1411
Bme18I	GGWCC	8 cut(s)	235, 253, 450, 487, 658, 963, 1421, 1593
BmeT110I	CYCGRG	3 cut(s)	98, 338, 1697
BmgBI	CACGTC	1 cut(s)	220
BmiI	GGNNCC	4 cut(s)	368, 488, 964, 1557
BmrFI	CCNGG	9 cut(s)	113, 233, 251, 485, 662, 885, 1343, 1402, 1411
BmsI	GCATC	3 cut(s)	132, 171, 216
BpiI	GAAGAC	2 cut(s)	283, 597
Bpu10I	CCTNAGC	1 cut(s)	1083
Bpu14I	TTCGAA	1 cut(s)	974
BpuEI	CTTGAG	3 cut(s)	50, 569, 1052
BpuMI	CCSGG	4 cut(s)	485, 885, 1343, 1411
BsaAI	YACGTR	1 cut(s)	1651
BsaHI	GRCGYC	2 cut(s)	276, 575
BsaJI	CCNNGG	3 cut(s)	249, 306, 1401
BsaWI	WCCGGW	1 cut(s)	537
BsaXI	ACNNNNNCTCC	2 cut(s)	119, 149
Bsc4I	CCNNNNNNNGG	6 cut(s)	25, 52, 286, 496, 667, 884
Bse118I	RCCGGY	1 cut(s)	1357
Bse21I	CCTNAGG	1 cut(s)	1050
Bse3DI	GCAATG	2 cut(s)	1476, 1643
BseBI	CCWGG	5 cut(s)	113, 233, 251, 662, 1402
BseDI	CCNNGG	3 cut(s)	249, 306, 1401
BseGI	GGATG	4 cut(s)	10, 42, 871, 1462
BseLI	CCNNNNNNNGG	6 cut(s)	25, 52, 286, 496, 667, 884
BseMI	GCAATG	2 cut(s)	1476, 1643
BseMII	CTCAG	4 cut(s)	428, 1041, 1074, 1458
BsePI	GCGCGC	1 cut(s)	240
BseRI	GAGGAG	4 cut(s)	38, 41, 326, 582
BseX3I	CGGCCG	2 cut(s)	213, 309
BseXI	GCAGC	7 cut(s)	567, 613, 892, 1207, 1216, 1276, 1459
BseYI	CCCAGC	3 cut(s)	441, 893, 1438
Bsh1236I	CGCG	9 cut(s)	53, 212, 240, 242, 308, 395, 419, 461, 1435
Bsh1285I	CGRYCG	6 cut(s)	130, 216, 312, 351, 538, 1265
BshFI	GGCC	8 cut(s)	74, 83, 116, 215, 224, 311, 829, 1163
BsiEI	CGRYCG	6 cut(s)	130, 216, 312, 351, 538, 1265
BsiHKAI	GWGCWC	2 cut(s)	66, 1710
BsiHKCI	CYCGRG	3 cut(s)	98, 338, 1697
BsiSI	CCGG	8 cut(s)	283, 484, 538, 884, 1286, 1343, 1358, 1411
BslFI	GGGAC	2 cut(s)	500, 542
BslI	CCNNNNNNNGG	6 cut(s)	25, 52, 286, 496, 667, 884
BsmAI	GTCTC	3 cut(s)	520, 843, 1133
BsmBI	CGTCTC	1 cut(s)	520
BsmFI	GGGAC	2 cut(s)	500, 542
BsmI	GAATGC	3 cut(s)	640, 897, 1525
BsnI	GGCC	8 cut(s)	74, 83, 116, 215, 224, 311, 829, 1163
BsoBI	CYCGRG	3 cut(s)	98, 338, 1697
Bsp119I	TTCGAA	1 cut(s)	974
Bsp1286I	GDGCHC	3 cut(s)	66, 1049, 1710
Bsp143I	GATC	8 cut(s)	55, 149, 348, 681, 1262, 1306, 1345, 1588
Bsp68I	TCGCGA	2 cut(s)	419, 461
BspANI	GGCC	8 cut(s)	74, 83, 116, 215, 224, 311, 829, 1163
BspCNI	CTCAG	4 cut(s)	429, 1042, 1075, 1459
BspFNI	CGCG	9 cut(s)	53, 212, 240, 242, 308, 395, 419, 461, 1435
BspLI	GGNNCC	4 cut(s)	368, 488, 964, 1557
BspMAI	CTGCAG	1 cut(s)	1234
BspMI	ACCTGC	2 cut(s)	277, 787
BspPI	GGATC	3 cut(s)	63, 144, 1353
BspT104I	TTCGAA	1 cut(s)	974
BsrDI	GCAATG	2 cut(s)	1476, 1643
BsrFI	RCCGGY	1 cut(s)	1357
BssAI	RCCGGY	1 cut(s)	1357
BssECI	CCNNGG	3 cut(s)	249, 306, 1401
BssHII	GCGCGC	1 cut(s)	240
BssMI	GATC	8 cut(s)	55, 149, 348, 681, 1262, 1306, 1345, 1588
BssNI	GRCGYC	2 cut(s)	276, 575
BssSI	CACGAG	1 cut(s)	77
Bst2BI	CACGAG	1 cut(s)	77
Bst2UI	CCWGG	5 cut(s)	113, 233, 251, 662, 1402
Bst4CI	ACNGT	3 cut(s)	679, 859, 1216
Bst6I	CTCTTC	1 cut(s)	1326
BstACI	GRCGYC	2 cut(s)	276, 575
BstAPI	GCANNNNNTGC	1 cut(s)	623
BstBAI	YACGTR	1 cut(s)	1651
BstBI	TTCGAA	1 cut(s)	974
BstC8I	GCNNGC	5 cut(s)	242, 266, 421, 522, 1010
BstDEI	CTNAG	5 cut(s)	437, 1050, 1083, 1256, 1467
BstDSI	CCRYGG	1 cut(s)	306
BstENI	CCTNNNNNAGG	2 cut(s)	23, 284
BstF5I	GGATG	4 cut(s)	10, 42, 871, 1462
BstFNI	CGCG	9 cut(s)	53, 212, 240, 242, 308, 395, 419, 461, 1435
BstH2I	RGCGCY	1 cut(s)	196
BstHHI	GCGC	7 cut(s)	107, 195, 242, 244, 395, 796, 1435
BstKTI	GATC	8 cut(s)	58, 152, 351, 684, 1265, 1309, 1348, 1591
BstMAI	GTCTC	3 cut(s)	520, 843, 1133
BstMBI	GATC	8 cut(s)	55, 149, 348, 681, 1262, 1306, 1345, 1588
BstMCI	CGRYCG	6 cut(s)	130, 216, 312, 351, 538, 1265
BstNI	CCWGG	5 cut(s)	113, 233, 251, 662, 1402
BstSCI	CCNGG	9 cut(s)	111, 231, 249, 483, 660, 883, 1341, 1400, 1409
BstSFI	CTRYAG	1 cut(s)	1230
BstUI	CGCG	9 cut(s)	53, 212, 240, 242, 308, 395, 419, 461, 1435
BstV1I	GCAGC	7 cut(s)	567, 613, 892, 1207, 1216, 1276, 1459
BstV2I	GAAGAC	2 cut(s)	283, 597
BstX2I	RGATCY	1 cut(s)	1345
BstXI	CCANNNNNNTGG	3 cut(s)	232, 472, 1483
BstYI	RGATCY	1 cut(s)	1345
BstZI	CGGCCG	2 cut(s)	213, 309
Bsu36I	CCTNAGG	1 cut(s)	1050
BsuI	GTATCC	1 cut(s)	847
BsuRI	GGCC	8 cut(s)	74, 83, 116, 215, 224, 311, 829, 1163
BtgI	CCRYGG	1 cut(s)	306
BtgZI	GCGATG	4 cut(s)	148, 193, 400, 442
BtrI	CACGTC	1 cut(s)	220
BtsCI	GGATG	4 cut(s)	10, 42, 871, 1462
BtsI	GCAGTG	2 cut(s)	1239, 1615
BtsIMutI	CAGTG	2 cut(s)	1239, 1615
BtuMI	TCGCGA	2 cut(s)	419, 461
BveI	ACCTGC	2 cut(s)	277, 787
Cac8I	GCNNGC	5 cut(s)	242, 266, 421, 522, 1010
CfoI	GCGC	7 cut(s)	107, 195, 242, 244, 395, 796, 1435
Cfr10I	RCCGGY	1 cut(s)	1357
Cfr42I	CCGCGG	1 cut(s)	309
CseI	GACGC	3 cut(s)	213, 265, 583
Csp6I	GTAC	2 cut(s)	951, 1692
CviAII	CATG	1 cut(s)	358
CviQI	GTAC	2 cut(s)	951, 1692
DdeI	CTNAG	5 cut(s)	437, 1050, 1083, 1256, 1467
DpnI	GATC	8 cut(s)	57, 151, 350, 683, 1264, 1308, 1347, 1590
DpnII	GATC	8 cut(s)	55, 149, 348, 681, 1262, 1306, 1345, 1588
EaeI	YGGCCR	4 cut(s)	213, 222, 309, 1161
EagI	CGGCCG	2 cut(s)	213, 309
Eam1104I	CTCTTC	1 cut(s)	1326
EarI	CTCTTC	1 cut(s)	1326
EciI	GGCGGA	4 cut(s)	142, 626, 782, 791
Ecl136II	GAGCTC	1 cut(s)	1708
EclXI	CGGCCG	2 cut(s)	213, 309
Eco24I	GRGCYC	2 cut(s)	1049, 1710
Eco47I	GGWCC	8 cut(s)	235, 253, 450, 487, 658, 963, 1421, 1593
Eco52I	CGGCCG	2 cut(s)	213, 309
Eco53kI	GAGCTC	1 cut(s)	1708
Eco57I	CTGAAG	1 cut(s)	614
Eco81I	CCTNAGG	1 cut(s)	1050
Eco88I	CYCGRG	3 cut(s)	98, 338, 1697
EcoICRI	GAGCTC	1 cut(s)	1708
EcoNI	CCTNNNNNAGG	2 cut(s)	23, 284
EcoO109I	RGGNCCY	1 cut(s)	963
EcoRI	GAATTC	1 cut(s)	943
EcoRII	CCWGG	5 cut(s)	111, 231, 249, 660, 1400
EcoT38I	GRGCYC	2 cut(s)	1049, 1710
Esp3I	CGTCTC	1 cut(s)	520
FaeI	CATG	1 cut(s)	361
FaiI	YATR	6 cut(s)	359, 648, 851, 1017, 1316, 1633
FaqI	GGGAC	2 cut(s)	500, 542
FatI	CATG	1 cut(s)	357
FauI	CCCGC	1 cut(s)	1001
FblI	GTMKAC	1 cut(s)	126
FokI	GGATG	4 cut(s)	17, 29, 878, 1469
FriOI	GRGCYC	2 cut(s)	1049, 1710
FspBI	CTAG	3 cut(s)	825, 954, 1622
FspI	TGCGCA	1 cut(s)	795
GlaI	GCGC	7 cut(s)	106, 194, 241, 243, 394, 795, 1434
GsaI	CCCAGC	3 cut(s)	445, 897, 1442
HaeII	RGCGCY	1 cut(s)	196
HaeIII	GGCC	8 cut(s)	74, 83, 116, 215, 224, 311, 829, 1163
HapII	CCGG	8 cut(s)	283, 484, 538, 884, 1286, 1343, 1358, 1411
HgaI	GACGC	3 cut(s)	213, 265, 583
HhaI	GCGC	7 cut(s)	107, 195, 242, 244, 395, 796, 1435
Hin1I	GRCGYC	2 cut(s)	276, 575
Hin1II	CATG	1 cut(s)	361
Hin6I	GCGC	7 cut(s)	105, 193, 240, 242, 393, 794, 1433
HinP1I	GCGC	7 cut(s)	105, 193, 240, 242, 393, 794, 1433
HincII	GTYRAC	2 cut(s)	127, 559
HindII	GTYRAC	2 cut(s)	127, 559
HindIII	AAGCTT	1 cut(s)	587
HinfI	GANTC	8 cut(s)	86, 341, 383, 433, 697, 725, 976, 1241
HpaII	CCGG	8 cut(s)	283, 484, 538, 884, 1286, 1343, 1358, 1411
HphI	GGTGA	3 cut(s)	238, 292, 766
Hpy166II	GTNNAC	4 cut(s)	127, 559, 802, 1174
Hpy188III	TCNNGA	8 cut(s)	418, 460, 863, 1250, 1328, 1670, 1697, 1732
Hpy8I	GTNNAC	4 cut(s)	127, 559, 802, 1174
Hpy99I	CGWCG	3 cut(s)	207, 221, 349
HpyAV	CCTTC	3 cut(s)	589, 1569, 1573
HpyCH4III	ACNGT	3 cut(s)	679, 859, 1216
HpyCH4IV	ACGT	2 cut(s)	219, 1650
HpyCH4V	TGCA	8 cut(s)	264, 1195, 1232, 1292, 1351, 1481, 1615, 1648
HpyF3I	CTNAG	5 cut(s)	437, 1050, 1083, 1256, 1467
HpySE526I	ACGT	2 cut(s)	219, 1650
Hsp92I	GRCGYC	2 cut(s)	276, 575
Hsp92II	CATG	1 cut(s)	361
HspAI	GCGC	7 cut(s)	105, 193, 240, 242, 393, 794, 1433
KspI	CCGCGG	1 cut(s)	309
Kzo9I	GATC	8 cut(s)	55, 149, 348, 681, 1262, 1306, 1345, 1588
LmnI	GCTCC	6 cut(s)	28, 150, 372, 486, 778, 1705
Lsp1109I	GCAGC	7 cut(s)	567, 613, 892, 1207, 1216, 1276, 1459
LweI	GCATC	3 cut(s)	132, 171, 216
MaeI	CTAG	3 cut(s)	825, 954, 1622
MaeII	ACGT	2 cut(s)	219, 1650
MaeIII	GTNAC	5 cut(s)	571, 820, 1132, 1377, 1634
MalI	GATC	8 cut(s)	57, 151, 350, 683, 1264, 1308, 1347, 1590
MboI	GATC	8 cut(s)	55, 149, 348, 681, 1262, 1306, 1345, 1588
MboII	GAAGA	4 cut(s)	283, 559, 597, 1343
MfeI	CAATTG	1 cut(s)	1371
MflI	RGATCY	1 cut(s)	1345
MhlI	GDGCHC	3 cut(s)	66, 1049, 1710
MlsI	TGGCCA	2 cut(s)	224, 1163
MluCI	AATT	6 cut(s)	552, 943, 1190, 1201, 1371, 1539
MluNI	TGGCCA	2 cut(s)	224, 1163
MlyI	GAGTC	4 cut(s)	95, 350, 392, 1250
MmeI	TCCRAC	2 cut(s)	226, 366
Mox20I	TGGCCA	2 cut(s)	224, 1163
MscI	TGGCCA	2 cut(s)	224, 1163
MseI	TTAA	3 cut(s)	915, 1200, 1272
MslI	CAYNNNNRTG	2 cut(s)	470, 990
Msp20I	TGGCCA	2 cut(s)	224, 1163
MspA1I	CMGCKG	3 cut(s)	273, 308, 580
MspI	CCGG	8 cut(s)	283, 484, 538, 884, 1286, 1343, 1358, 1411
MspR9I	CCNGG	9 cut(s)	113, 233, 251, 485, 662, 885, 1343, 1402, 1411
MunI	CAATTG	1 cut(s)	1371
Mva1269I	GAATGC	3 cut(s)	640, 897, 1525
MvaI	CCWGG	5 cut(s)	113, 233, 251, 662, 1402
MvnI	CGCG	9 cut(s)	53, 212, 240, 242, 308, 395, 419, 461, 1435
NciI	CCSGG	4 cut(s)	485, 885, 1343, 1411
NdeII	GATC	8 cut(s)	55, 149, 348, 681, 1262, 1306, 1345, 1588
NlaIII	CATG	1 cut(s)	361
NlaIV	GGNNCC	4 cut(s)	368, 488, 964, 1557
NmeAIII	GCCGAG	1 cut(s)	109
NmuCI	GTSAC	3 cut(s)	571, 820, 1377
NruI	TCGCGA	2 cut(s)	419, 461
NsbI	TGCGCA	1 cut(s)	795
NspV	TTCGAA	1 cut(s)	974
PaeR7I	CTCGAG	3 cut(s)	98, 338, 1697
PaqCI	CACCTGC	1 cut(s)	787
PauI	GCGCGC	1 cut(s)	240
PcsI	WCGNNNNNNNCGW	6 cut(s)	105, 195, 216, 392, 423, 1647
PctI	GAATGC	3 cut(s)	640, 897, 1525
PfeI	GAWTC	4 cut(s)	433, 697, 725, 976
PfoI	TCCNGGA	1 cut(s)	483
Ple19I	CGATCG	2 cut(s)	351, 1265
PleI	GAGTC	4 cut(s)	94, 349, 391, 1249
PpsI	GAGTC	4 cut(s)	94, 349, 391, 1249
Ppu21I	YACGTR	1 cut(s)	1651
PpuMI	RGGWCCY	1 cut(s)	963
PshBI	ATTAAT	1 cut(s)	915
Psp124BI	GAGCTC	1 cut(s)	1710
Psp5II	RGGWCCY	1 cut(s)	963
Psp6I	CCWGG	5 cut(s)	111, 231, 249, 660, 1400
PspFI	CCCAGC	3 cut(s)	441, 893, 1438
PspGI	CCWGG	5 cut(s)	111, 231, 249, 660, 1400
PspN4I	GGNNCC	4 cut(s)	368, 488, 964, 1557
PspPPI	RGGWCCY	1 cut(s)	963
PspXI	VCTCGAGB	2 cut(s)	98, 338
PstI	CTGCAG	1 cut(s)	1234
PsuI	RGATCY	1 cut(s)	1345
PteI	GCGCGC	1 cut(s)	240
PvuI	CGATCG	2 cut(s)	351, 1265
RruI	TCGCGA	2 cut(s)	419, 461
RsaI	GTAC	2 cut(s)	952, 1693
RsaNI	GTAC	2 cut(s)	951, 1692
RseI	CAYNNNNRTG	2 cut(s)	470, 990
SacI	GAGCTC	1 cut(s)	1710
SacII	CCGCGG	1 cut(s)	309
SalI	GTCGAC	1 cut(s)	125
SaqAI	TTAA	3 cut(s)	915, 1200, 1272
Sau3AI	GATC	8 cut(s)	55, 149, 348, 681, 1262, 1306, 1345, 1588
ScaI	AGTACT	2 cut(s)	952, 1693
SchI	GAGTC	4 cut(s)	95, 350, 392, 1250
ScrFI	CCNGG	9 cut(s)	113, 233, 251, 485, 662, 885, 1343, 1402, 1411
SduI	GDGCHC	3 cut(s)	66, 1049, 1710
SfaNI	GCATC	3 cut(s)	132, 171, 216
SfcI	CTRYAG	1 cut(s)	1230
SfiI	GGCCNNNNNGGCC	2 cut(s)	80, 221
Sfr274I	CTCGAG	3 cut(s)	98, 338, 1697
Sfr303I	CCGCGG	1 cut(s)	309
SfuI	TTCGAA	1 cut(s)	974
SgrBI	CCGCGG	1 cut(s)	309
SinI	GGWCC	8 cut(s)	235, 253, 450, 487, 658, 963, 1421, 1593
SlaI	CTCGAG	3 cut(s)	98, 338, 1697
SmiMI	CAYNNNNRTG	2 cut(s)	470, 990
SmlI	CTYRAG	6 cut(s)	65, 98, 338, 584, 1067, 1697
SmoI	CTYRAG	6 cut(s)	65, 98, 338, 584, 1067, 1697
Sse9I	AATT	6 cut(s)	552, 943, 1190, 1201, 1371, 1539
SspMI	CTAG	3 cut(s)	825, 954, 1622
SstI	GAGCTC	1 cut(s)	1710
StyD4I	CCNGG	9 cut(s)	111, 231, 249, 483, 660, 883, 1341, 1400, 1409
TaaI	ACNGT	3 cut(s)	679, 859, 1216
TaiI	ACGT	2 cut(s)	222, 1653
TaqII	GACCGA	1 cut(s)	504
TasI	AATT	6 cut(s)	552, 943, 1190, 1201, 1371, 1539
TatI	WGTACW	2 cut(s)	950, 1691
TfiI	GAWTC	4 cut(s)	433, 697, 725, 976
Tru1I	TTAA	3 cut(s)	915, 1200, 1272
Tru9I	TTAA	3 cut(s)	915, 1200, 1272
TscAI	CASTG	2 cut(s)	1239, 1622
TseFI	GTSAC	3 cut(s)	571, 820, 1377
TseI	GCWGC	7 cut(s)	580, 626, 880, 1195, 1229, 1289, 1472
Tsp45I	GTSAC	3 cut(s)	571, 820, 1377
TspDTI	ATGAA	3 cut(s)	374, 635, 890
TspGWI	ACGGA	1 cut(s)	671
TspRI	CASTG	2 cut(s)	1239, 1622
VpaK11BI	GGWCC	8 cut(s)	235, 253, 450, 487, 658, 963, 1421, 1593
VspI	ATTAAT	1 cut(s)	915
XagI	CCTNNNNNAGG	2 cut(s)	23, 284
XapI	RAATTY	1 cut(s)	943
XhoI	CTCGAG	3 cut(s)	98, 338, 1697
XmiI	GTMKAC	1 cut(s)	126
XspI	CTAG	3 cut(s)	825, 954, 1622
ZrmI	AGTACT	2 cut(s)	952, 1693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.