MD13G1102400.v1.1

Armadillo repeat only

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0001438
Physical Location & Seq
Forward (+)
7315584 .. 7317461
1878 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1102400.v1.1.491

Sequence Viewer

Length: 1878 bp
ATGGCTTCGGAGGAGAGCCGAATAGAGGACGAACTGTCGCACCCGATTCTGCTGGCGGAGCGGGTCCGGACCGCCGTCGACGAGGCGGAGTCGTTCAAGCTGGAGTGCTCCGAGGTGGGGAAGCAGGTGGATCGTCTCTCGCAGAAGCTCCGAACCGTGGTCCGGTTGGCCACGGCAGCCCCGGTTCTGTACGAGCGCCCGATTCGGCGCATCGTCGCCGAGGTGTCGAAGAATCTGGAGCGGGCCCTGACCCTGGTCCGTAAGTGCAAGCGCCAGAGCATCCTACGACGTGTCGTAACCATCACGAGCGCCGCCGACTTCCGGAAGCTCTTCAACTTCCTCGAGTCCTCCGTCGGCGACATGAAGTGGCTGCTCAGCTTATTCGACCCGGACACCGCTGGCAATAACGGAATTGAACTCTCCCTCGCCCCGATTGCCAGCAACGACCCGATTCTCTCGTGGGTCTGGTCATTCATCGCCACCGTCCAAATGGGTCAGCTGCCGCATCGTATCGAGGCCGCCAATGAGCTCGCCTCACTGGCGCAGGACAACGACCGGAACAAGAAGATTATTGTCGACGAAGGCGGAGTCTCGCCGCTACTGAAATTGTTGAAGGAGGGCTCGTCGCCTGATGCCCAAATTGCGGCGGCGACGGCGCTCTATAATCTGGCGGGCGATCAGGAGAAGGTGAAGGCTATTGTGAATGAGGTTGGGGTGCCTATTATTGTGCAGGTTCTGGGCGACTCGCCGATGAGGGTTCAGAGCCATGTGGCGACCCTGGTGGCTCGGATGGCAGAGCATGACAGCATTTCCCAGGAGGATTTCGCCAGGGAGAATGTGATCAGGCCGCTGGTGACGCTACTGTCGTTCGAGATGTTTGGGGAGGATCAGAGTAATGATCAGTTGGGTAAGCAAAGCATTCACTCTCTGATTCAGATTAATAGGGAAATAGAGAAGAGCACATTAGCAAAACCGCAATCGAGAGGCAGTAGCAGTAGCAGCGACAGTATGTATAGACCTCATTCGAATACGTATTCAAGTTCTTCGTATTCTTATTATTCGGAGGGTAGTAGCCGAGGCGGGCATCATAGGAAGGAGAGGGAGAATGAGAAGCCTCATGTTAAGCTTCAGCTGAAAATTAGTTGCGCCGCGGCGTTGTGGATGCTTGCCAGGGGCAGTGTTTTGAATGGTAGGAGGATAACTGAGACCAAAGGTTTGCTTTGTTTGGCTAAGTTGGTGGAGAAGGAACAGGGTGAGTTGCAATTCAACTGTTTGATGACTATAATGGAGATAACGGCTGCGGCTGAATCCAATGCTGAACTTAGACGAGCCGCGTTTAAGACCAATTCTCCGGCTGCCAAGGCGGTTGTGGATCAGCTCTTGAGACTGATCAAAGAGGTGGACAGCCCGATACTGCAAATTCCTGCTGTAAAATCGATTGGCTTGCTTGCCAGGGCATTCCCTGCTAGAGAGACGCGGGTCATTGGTCCGCTAGTGACTCAACTTAGCCACAAAGATCTTGACATGGGAACTGAAGCGGCAATTGCACTGGGGAAGTTTGCCTGTCCGGATAATTTTCTCTGTATGGAGCATTCGAAGAGGATAATTGAGTCCAACGCTATACCGCCTCTGATGAAACTGCTAAGAGGAAACGAACACTCGTGGCTGCACGGATTGATTCTTCTTTGCTACCTTGCATTGCACTCTGGGAATACCAACTCTTTGGAACCGACCAGGGTGTTGACAGTCCTTGAAGGGGCTGACCGCAGTGCACTCCCCCAACATCCCGAGTTGAGAGAGTTGGTGTCCAAGGCGATATATCACCTCAATCTGTACCACACTGGAGGTCATTCGCAAAGGATGGCATTTGTGCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm

Protein Analysis

626

Amino Acids

69.12

Weight (kDa)

8.04

Isoelectric Point (pI)

45.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7792 PF25055 9 - 129 5e-52 Domain of unknown function (DUF7792)
Arm PF00514 184 - 224 5.1e-08 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 115
AasI GACNNNNNNGTC 1 cut(s) 862
Acc36I ACCTGC 2 cut(s) 115, 721
AccB1I GGYRCC 1 cut(s) 715
AccBSI CCGCTC 2 cut(s) 61, 241
AccI GTMKAC 2 cut(s) 78, 576
AccII CGCG 3 cut(s) 1151, 1334, 1477
AccIII TCCGGA 3 cut(s) 66, 321, 1567
AclWI GGATC 3 cut(s) 138, 894, 1380
AcoI YGGCCR 1 cut(s) 168
AcsI RAATTY 1 cut(s) 1419
AcuI CTGAAG 2 cut(s) 1112, 1554
AfaI GTAC 2 cut(s) 191, 1835
AfiI CCNNNNNNNGG 8 cut(s) 25, 117, 157, 162, 253, 321, 643, 1756
AflIII ACRYGT 1 cut(s) 289
AgsI TTSAA 8 cut(s) 97, 334, 416, 613, 1038, 1186, 1267, 1754
AhdI GACNNNNNGTC 1 cut(s) 34
AjiI CACGTC 1 cut(s) 290
AjnI CCWGG 7 cut(s) 252, 777, 813, 827, 1169, 1451, 1733
AluBI AGCT 9 cut(s) 100, 148, 328, 378, 499, 529, 1126, 1132, 1378
AluI AGCT 9 cut(s) 100, 148, 328, 378, 499, 529, 1126, 1132, 1378
Alw21I GWGCWC 4 cut(s) 110, 531, 962, 1774
Alw26I GTCTC 5 cut(s) 140, 595, 1199, 1378, 1466
Alw44I GTGCAC 1 cut(s) 1770
AlwI GGATC 3 cut(s) 138, 894, 1380
AlwNI CAGNNNCTG 1 cut(s) 736
Ama87I CYCGRG 2 cut(s) 341, 1787
Aor13HI TCCGGA 3 cut(s) 66, 321, 1567
AoxI GGCC 4 cut(s) 168, 243, 516, 845
ApaI GGGCCC 1 cut(s) 247
ApaLI GTGCAC 1 cut(s) 1770
ApeKI GCWGC 7 cut(s) 176, 370, 499, 999, 1298, 1355, 1666
ApoI RAATTY 1 cut(s) 1419
ArsI GACNNNNNNTTYG 4 cut(s) 573, 605, 1198, 1230
AseI ATTAAT 1 cut(s) 939
Asp700I GAANNNNTTC 1 cut(s) 329
AspLEI GCGC 7 cut(s) 198, 210, 273, 311, 544, 658, 1148
AspS9I GGNCC 7 cut(s) 64, 69, 160, 243, 244, 256, 1487
AsuC2I CCSGG 2 cut(s) 182, 389
AsuHPI GGTGA 4 cut(s) 700, 865, 1265, 1814
AsuII TTCGAA 2 cut(s) 1025, 1595
AvaI CYCGRG 2 cut(s) 341, 1787
AvaII GGWCC 5 cut(s) 64, 69, 160, 256, 1487
BaeGI GKGCMC 2 cut(s) 247, 1774
BalI TGGCCA 1 cut(s) 170
BanI GGYRCC 1 cut(s) 715
BanII GRGCYC 3 cut(s) 247, 531, 623
BauI CACGAG 3 cut(s) 304, 457, 1660
Bbv12I GWGCWC 4 cut(s) 110, 531, 962, 1774
BbvI GCAGC 7 cut(s) 188, 357, 486, 1011, 1285, 1342, 1653
BccI CCATC 3 cut(s) 308, 784, 1855
BceAI ACGGC 5 cut(s) 59, 189, 669, 1311, 1858
BcgI CGANNNNNNTGC 4 cut(s) 113, 147, 1426, 1460
BciT130I CCWGG 7 cut(s) 254, 779, 815, 829, 1171, 1453, 1735
BclI TGATCA 3 cut(s) 840, 898, 1389
BcnI CCSGG 2 cut(s) 182, 389
BcoDI GTCTC 5 cut(s) 140, 595, 1199, 1378, 1466
BfaI CTAG 2 cut(s) 1467, 1493
BfoI RGCGCY 4 cut(s) 199, 274, 312, 659
BfuAI ACCTGC 2 cut(s) 115, 721
BglI GCCNNNNNGGC 1 cut(s) 539
BglII AGATCT 1 cut(s) 1516
BlpI GCTNAGC 1 cut(s) 374
Bme1390I CCNGG 9 cut(s) 182, 254, 389, 779, 815, 829, 1171, 1453, 1735
Bme18I GGWCC 5 cut(s) 64, 69, 160, 256, 1487
BmeRI GACNNNNNGTC 1 cut(s) 34
BmeT110I CYCGRG 2 cut(s) 341, 1787
BmgBI CACGTC 1 cut(s) 290
BmgT120I GGNCC 7 cut(s) 64, 69, 160, 243, 244, 256, 1487
BmiI GGNNCC 4 cut(s) 65, 245, 717, 1728
BmrFI CCNGG 9 cut(s) 182, 254, 389, 779, 815, 829, 1171, 1453, 1735
BmrI ACTGGG 1 cut(s) 1559
BmsI GCATC 6 cut(s) 219, 288, 514, 622, 1093, 1152
BmuI ACTGGG 1 cut(s) 1559
BoxI GACNNNNGTC 3 cut(s) 74, 254, 1478
BplI GAGNNNNNCTC 2 cut(s) 518, 550
BpmI CTGGAG 3 cut(s) 122, 257, 1863
Bpu1102I GCTNAGC 1 cut(s) 374
Bpu14I TTCGAA 2 cut(s) 1025, 1595
BpuEI CTTGAG 1 cut(s) 1402
BpuMI CCSGG 2 cut(s) 182, 389
Bsa29I ATCGAT 1 cut(s) 1436
BsaAI YACGTR 1 cut(s) 1032
BsaI GGTCTC 1 cut(s) 1199
BsaWI WCCGGW 5 cut(s) 66, 162, 321, 555, 1567
BsaXI ACNNNNNCTCC 4 cut(s) 608, 638, 1333, 1363
Bsc4I CCNNNNNNNGG 8 cut(s) 25, 117, 157, 162, 253, 321, 643, 1756
Bse1I ACTGG 3 cut(s) 543, 1554, 1846
Bse3DI GCAATG 1 cut(s) 1697
BseAI TCCGGA 3 cut(s) 66, 321, 1567
BseBI CCWGG 7 cut(s) 254, 779, 815, 829, 1171, 1453, 1735
BseCI ATCGAT 1 cut(s) 1436
BseGI GGATG 5 cut(s) 279, 795, 1167, 1783, 1866
BseLI CCNNNNNNNGG 8 cut(s) 25, 117, 157, 162, 253, 321, 643, 1756
BseMI GCAATG 1 cut(s) 1697
BseMII CTCAG 2 cut(s) 388, 1194
BseNI ACTGG 3 cut(s) 543, 1554, 1846
BseRI GAGGAG 1 cut(s) 26
BseSI GKGCMC 2 cut(s) 247, 1774
BseXI GCAGC 7 cut(s) 188, 357, 486, 1011, 1285, 1342, 1653
BsgI GTGCAG 2 cut(s) 749, 1652
Bsh1236I CGCG 3 cut(s) 1151, 1334, 1477
Bsh1285I CGRYCG 1 cut(s) 556
BshFI GGCC 4 cut(s) 170, 245, 518, 847
BshNI GGYRCC 1 cut(s) 715
BshVI ATCGAT 1 cut(s) 1436
BsiEI CGRYCG 1 cut(s) 556
BsiHKAI GWGCWC 4 cut(s) 110, 531, 962, 1774
BsiHKCI CYCGRG 2 cut(s) 341, 1787
BsiSI CCGG 8 cut(s) 67, 163, 182, 322, 389, 556, 1352, 1568
BslI CCNNNNNNNGG 8 cut(s) 25, 117, 157, 162, 253, 321, 643, 1756
BsmAI GTCTC 5 cut(s) 140, 595, 1199, 1378, 1466
BsmBI CGTCTC 2 cut(s) 140, 1466
BsmI GAATGC 3 cut(s) 918, 1457, 1591
BsnI GGCC 4 cut(s) 170, 245, 518, 847
Bso31I GGTCTC 1 cut(s) 1199
BsoBI CYCGRG 2 cut(s) 341, 1787
Bsp119I TTCGAA 2 cut(s) 1025, 1595
Bsp120I GGGCCC 1 cut(s) 243
Bsp1286I GDGCHC 6 cut(s) 110, 247, 531, 623, 962, 1774
Bsp13I TCCGGA 3 cut(s) 66, 321, 1567
Bsp143I GATC 8 cut(s) 130, 676, 840, 886, 898, 1372, 1389, 1516
Bsp1720I GCTNAGC 1 cut(s) 374
BspANI GGCC 4 cut(s) 170, 245, 518, 847
BspCNI CTCAG 2 cut(s) 387, 1195
BspDI ATCGAT 1 cut(s) 1436
BspEI TCCGGA 3 cut(s) 66, 321, 1567
BspFNI CGCG 3 cut(s) 1151, 1334, 1477
BspLI GGNNCC 4 cut(s) 65, 245, 717, 1728
BspMI ACCTGC 2 cut(s) 115, 721
BspPI GGATC 3 cut(s) 138, 894, 1380
BspQI GCTCTTC 2 cut(s) 335, 950
BspT104I TTCGAA 2 cut(s) 1025, 1595
BspT107I GGYRCC 1 cut(s) 715
BspTNI GGTCTC 1 cut(s) 1199
BsrBI CCGCTC 2 cut(s) 61, 241
BsrDI GCAATG 1 cut(s) 1697
BsrI ACTGG 3 cut(s) 543, 1554, 1846
BssMI GATC 8 cut(s) 130, 676, 840, 886, 898, 1372, 1389, 1516
BssSI CACGAG 3 cut(s) 304, 457, 1660
BssT1I CCWWGG 2 cut(s) 1359, 1809
Bst2BI CACGAG 3 cut(s) 304, 457, 1660
Bst2UI CCWGG 7 cut(s) 254, 779, 815, 829, 1171, 1453, 1735
Bst4CI ACNGT 7 cut(s) 36, 157, 484, 864, 1007, 1271, 1747
Bst6I CTCTTC 3 cut(s) 335, 950, 1592
BstAPI GCANNNNNTGC 1 cut(s) 1463
BstBAI YACGTR 1 cut(s) 1032
BstBI TTCGAA 2 cut(s) 1025, 1595
BstDEI CTNAG 6 cut(s) 374, 1203, 1230, 1322, 1505, 1643
BstDSI CCRYGG 3 cut(s) 156, 171, 1149
BstF5I GGATG 5 cut(s) 279, 795, 1167, 1783, 1866
BstFNI CGCG 3 cut(s) 1151, 1334, 1477
BstH2I RGCGCY 4 cut(s) 199, 274, 312, 659
BstHHI GCGC 7 cut(s) 198, 210, 273, 311, 544, 658, 1148
BstKTI GATC 8 cut(s) 133, 679, 843, 889, 901, 1375, 1392, 1519
BstMAI GTCTC 5 cut(s) 140, 595, 1199, 1378, 1466
BstMBI GATC 8 cut(s) 130, 676, 840, 886, 898, 1372, 1389, 1516
BstMCI CGRYCG 1 cut(s) 556
BstNI CCWGG 7 cut(s) 254, 779, 815, 829, 1171, 1453, 1735
BstPAI GACNNNNGTC 3 cut(s) 74, 254, 1478
BstSCI CCNGG 9 cut(s) 180, 252, 387, 777, 813, 827, 1169, 1451, 1733
BstSLI GKGCMC 2 cut(s) 247, 1774
BstSNI TACGTA 1 cut(s) 1032
BstUI CGCG 3 cut(s) 1151, 1334, 1477
BstV1I GCAGC 7 cut(s) 188, 357, 486, 1011, 1285, 1342, 1653
BstX2I RGATCY 1 cut(s) 1516
BstXI CCANNNNNNTGG 1 cut(s) 1723
BstYI RGATCY 1 cut(s) 1516
Bsu15I ATCGAT 1 cut(s) 1436
BsuRI GGCC 4 cut(s) 170, 245, 518, 847
BsuTUI ATCGAT 1 cut(s) 1436
BtgI CCRYGG 3 cut(s) 156, 171, 1149
BtgZI GCGATG 1 cut(s) 460
BtrI CACGTC 1 cut(s) 290
BtsCI GGATG 5 cut(s) 279, 795, 1167, 1783, 1866
BtsI GCAGTG 2 cut(s) 1183, 1774
BtsIMutI CAGTG 5 cut(s) 536, 1183, 1547, 1774, 1839
BveI ACCTGC 2 cut(s) 115, 721
CaiI CAGNNNCTG 1 cut(s) 736
CfoI GCGC 7 cut(s) 198, 210, 273, 311, 544, 658, 1148
Cfr13I GGNCC 7 cut(s) 64, 69, 160, 243, 244, 256, 1487
Cfr42I CCGCGG 1 cut(s) 1152
ClaI ATCGAT 1 cut(s) 1436
CpoI CGGWCCG 1 cut(s) 69
CseI GACGC 2 cut(s) 865, 1483
Csp6I GTAC 2 cut(s) 190, 1834
CspI CGGWCCG 1 cut(s) 69
CviAII CATG 5 cut(s) 361, 767, 800, 1118, 1525
CviQI GTAC 2 cut(s) 190, 1834
DdeI CTNAG 6 cut(s) 374, 1203, 1230, 1322, 1505, 1643
DpnI GATC 8 cut(s) 132, 678, 842, 888, 900, 1374, 1391, 1518
DpnII GATC 8 cut(s) 130, 676, 840, 886, 898, 1372, 1389, 1516
DrdI GACNNNNNNGTC 1 cut(s) 862
DriI GACNNNNNGTC 1 cut(s) 34
DseDI GACNNNNNNGTC 1 cut(s) 862
EaeI YGGCCR 1 cut(s) 168
Eam1104I CTCTTC 3 cut(s) 335, 950, 1592
Eam1105I GACNNNNNGTC 1 cut(s) 34
EarI CTCTTC 3 cut(s) 335, 950, 1592
EciI GGCGGA 3 cut(s) 71, 101, 600
Ecl136II GAGCTC 1 cut(s) 529
Eco105I TACGTA 1 cut(s) 1032
Eco130I CCWWGG 2 cut(s) 1359, 1809
Eco24I GRGCYC 3 cut(s) 247, 531, 623
Eco31I GGTCTC 1 cut(s) 1199
Eco47I GGWCC 5 cut(s) 64, 69, 160, 256, 1487
Eco53kI GAGCTC 1 cut(s) 529
Eco57I CTGAAG 2 cut(s) 1112, 1554
Eco88I CYCGRG 2 cut(s) 341, 1787
EcoICRI GAGCTC 1 cut(s) 529
EcoO109I RGGNCCY 1 cut(s) 244
EcoRII CCWGG 7 cut(s) 252, 777, 813, 827, 1169, 1451, 1733
EcoT14I CCWWGG 2 cut(s) 1359, 1809
EcoT38I GRGCYC 3 cut(s) 247, 531, 623
ErhI CCWWGG 2 cut(s) 1359, 1809
Esp3I CGTCTC 2 cut(s) 140, 1466
FaeI CATG 5 cut(s) 364, 770, 803, 1121, 1528
FalI AAGNNNNNCTT 2 cut(s) 1203, 1235
FatI CATG 5 cut(s) 360, 766, 799, 1117, 1524
FauI CCCGC 5 cut(s) 54, 234, 664, 1073, 1470
FbaI TGATCA 3 cut(s) 840, 898, 1389
FblI GTMKAC 2 cut(s) 78, 576
FokI GGATG 5 cut(s) 266, 802, 1174, 1770, 1873
FriOI GRGCYC 3 cut(s) 247, 531, 623
FspBI CTAG 2 cut(s) 1467, 1493
GlaI GCGC 7 cut(s) 197, 209, 272, 310, 543, 657, 1147
GsuI CTGGAG 3 cut(s) 122, 257, 1863
HaeII RGCGCY 4 cut(s) 199, 274, 312, 659
HaeIII GGCC 4 cut(s) 170, 245, 518, 847
HapII CCGG 8 cut(s) 67, 163, 182, 322, 389, 556, 1352, 1568
HgaI GACGC 2 cut(s) 865, 1483
HhaI GCGC 7 cut(s) 198, 210, 273, 311, 544, 658, 1148
Hin1II CATG 5 cut(s) 364, 770, 803, 1121, 1528
Hin6I GCGC 7 cut(s) 196, 208, 271, 309, 542, 656, 1146
HinP1I GCGC 7 cut(s) 196, 208, 271, 309, 542, 656, 1146
HincII GTYRAC 3 cut(s) 79, 577, 1743
HindII GTYRAC 3 cut(s) 79, 577, 1743
HindIII AAGCTT 1 cut(s) 1124
HpaII CCGG 8 cut(s) 67, 163, 182, 322, 389, 556, 1352, 1568
HphI GGTGA 4 cut(s) 700, 865, 1265, 1814
Hpy166II GTNNAC 5 cut(s) 79, 577, 1402, 1743, 1772
Hpy8I GTNNAC 5 cut(s) 79, 577, 1402, 1743, 1772
Hpy99I CGWCG 8 cut(s) 80, 83, 218, 291, 356, 581, 628, 655
HpyAV CCTTC 7 cut(s) 575, 607, 679, 685, 1087, 1237, 1748
HpyCH4III ACNGT 7 cut(s) 36, 157, 484, 864, 1007, 1271, 1747
HpyCH4IV ACGT 2 cut(s) 289, 1031
HpyCH4V TGCA 9 cut(s) 267, 730, 1261, 1417, 1547, 1669, 1697, 1702, 1772
HpyF3I CTNAG 6 cut(s) 374, 1203, 1230, 1322, 1505, 1643
HpySE526I ACGT 2 cut(s) 289, 1031
Hsp92II CATG 5 cut(s) 364, 770, 803, 1121, 1528
HspAI GCGC 7 cut(s) 196, 208, 271, 309, 542, 656, 1146
Kpn2I TCCGGA 3 cut(s) 66, 321, 1567
Ksp22I TGATCA 3 cut(s) 840, 898, 1389
KspI CCGCGG 1 cut(s) 1152
Kzo9I GATC 8 cut(s) 130, 676, 840, 886, 898, 1372, 1389, 1516
LguI GCTCTTC 2 cut(s) 335, 950
LmnI GCTCC 5 cut(s) 58, 113, 153, 238, 1588
Lsp1109I GCAGC 7 cut(s) 188, 357, 486, 1011, 1285, 1342, 1653
LweI GCATC 6 cut(s) 219, 288, 514, 622, 1093, 1152
MaeI CTAG 2 cut(s) 1467, 1493
MaeII ACGT 2 cut(s) 289, 1031
MaeIII GTNAC 3 cut(s) 295, 853, 1495
MalI GATC 8 cut(s) 132, 678, 842, 888, 900, 1374, 1391, 1518
MbiI CCGCTC 2 cut(s) 61, 241
MboI GATC 8 cut(s) 130, 676, 840, 886, 898, 1372, 1389, 1516
MboII GAAGA 7 cut(s) 241, 322, 577, 967, 1035, 1609, 1673
MfeI CAATTG 1 cut(s) 1542
MflI RGATCY 1 cut(s) 1516
MhlI GDGCHC 6 cut(s) 110, 247, 531, 623, 962, 1774
MlsI TGGCCA 1 cut(s) 170
MluNI TGGCCA 1 cut(s) 170
MlyI GAGTC 6 cut(s) 98, 353, 597, 737, 1492, 1619
MmeI TCCRAC 1 cut(s) 1638
Mox20I TGGCCA 1 cut(s) 170
MroI TCCGGA 3 cut(s) 66, 321, 1567
MroXI GAANNNNTTC 1 cut(s) 329
MscI TGGCCA 1 cut(s) 170
MseI TTAA 3 cut(s) 939, 1122, 1338
Msp20I TGGCCA 1 cut(s) 170
MspA1I CMGCKG 5 cut(s) 398, 499, 850, 1132, 1151
MspI CCGG 8 cut(s) 67, 163, 182, 322, 389, 556, 1352, 1568
MspR9I CCNGG 9 cut(s) 182, 254, 389, 779, 815, 829, 1171, 1453, 1735
MunI CAATTG 1 cut(s) 1542
Mva1269I GAATGC 3 cut(s) 918, 1457, 1591
MvaI CCWGG 7 cut(s) 254, 779, 815, 829, 1171, 1453, 1735
MvnI CGCG 3 cut(s) 1151, 1334, 1477
NciI CCSGG 2 cut(s) 182, 389
NdeII GATC 8 cut(s) 130, 676, 840, 886, 898, 1372, 1389, 1516
NlaIII CATG 5 cut(s) 364, 770, 803, 1121, 1528
NlaIV GGNNCC 4 cut(s) 65, 245, 717, 1728
NmeAIII GCCGAG 2 cut(s) 244, 1100
NmuCI GTSAC 2 cut(s) 853, 1495
NspV TTCGAA 2 cut(s) 1025, 1595
PaeR7I CTCGAG 1 cut(s) 341
PaqCI CACCTGC 1 cut(s) 115
PciSI GCTCTTC 2 cut(s) 335, 950
PcsI WCGNNNNNNNCGW 2 cut(s) 348, 863
PctI GAATGC 3 cut(s) 918, 1457, 1591
PdmI GAANNNNTTC 1 cut(s) 329
PfeI GAWTC 7 cut(s) 46, 202, 232, 451, 931, 1307, 1678
PleI GAGTC 6 cut(s) 97, 352, 596, 737, 1492, 1618
PpsI GAGTC 6 cut(s) 97, 352, 596, 737, 1492, 1618
Ppu21I YACGTR 1 cut(s) 1032
PshAI GACNNNNGTC 3 cut(s) 74, 254, 1478
PshBI ATTAAT 1 cut(s) 939
Psp124BI GAGCTC 1 cut(s) 531
Psp6I CCWGG 7 cut(s) 252, 777, 813, 827, 1169, 1451, 1733
PspGI CCWGG 7 cut(s) 252, 777, 813, 827, 1169, 1451, 1733
PspN4I GGNNCC 4 cut(s) 65, 245, 717, 1728
PspOMI GGGCCC 1 cut(s) 243
PspPI GGNCC 7 cut(s) 64, 69, 160, 243, 244, 256, 1487
PspXI VCTCGAGB 1 cut(s) 341
PstNI CAGNNNCTG 1 cut(s) 736
PsuI RGATCY 1 cut(s) 1516
PvuII CAGCTG 2 cut(s) 499, 1132
RsaI GTAC 2 cut(s) 191, 1835
RsaNI GTAC 2 cut(s) 190, 1834
Rsr2I CGGWCCG 1 cut(s) 69
RsrII CGGWCCG 1 cut(s) 69
SacI GAGCTC 1 cut(s) 531
SacII CCGCGG 1 cut(s) 1152
SalI GTCGAC 2 cut(s) 77, 575
SapI GCTCTTC 2 cut(s) 335, 950
SaqAI TTAA 3 cut(s) 939, 1122, 1338
Sau3AI GATC 8 cut(s) 130, 676, 840, 886, 898, 1372, 1389, 1516
Sau96I GGNCC 7 cut(s) 64, 69, 160, 243, 244, 256, 1487
SchI GAGTC 6 cut(s) 98, 353, 597, 737, 1492, 1619
ScrFI CCNGG 9 cut(s) 182, 254, 389, 779, 815, 829, 1171, 1453, 1735
SduI GDGCHC 6 cut(s) 110, 247, 531, 623, 962, 1774
SfaNI GCATC 6 cut(s) 219, 288, 514, 622, 1093, 1152
Sfr274I CTCGAG 1 cut(s) 341
Sfr303I CCGCGG 1 cut(s) 1152
SfuI TTCGAA 2 cut(s) 1025, 1595
SgrBI CCGCGG 1 cut(s) 1152
SgrDI CGTCGACG 1 cut(s) 77
SinI GGWCC 5 cut(s) 64, 69, 160, 256, 1487
SlaI CTCGAG 1 cut(s) 341
SmlI CTYRAG 2 cut(s) 341, 1381
SmoI CTYRAG 2 cut(s) 341, 1381
SnaBI TACGTA 1 cut(s) 1032
SspMI CTAG 2 cut(s) 1467, 1493
SstI GAGCTC 1 cut(s) 531
StyD4I CCNGG 9 cut(s) 180, 252, 387, 777, 813, 827, 1169, 1451, 1733
StyI CCWWGG 2 cut(s) 1359, 1809
TaaI ACNGT 7 cut(s) 36, 157, 484, 864, 1007, 1271, 1747
TaiI ACGT 2 cut(s) 292, 1034
TfiI GAWTC 7 cut(s) 46, 202, 232, 451, 931, 1307, 1678
Tru1I TTAA 3 cut(s) 939, 1122, 1338
Tru9I TTAA 3 cut(s) 939, 1122, 1338
TscAI CASTG 5 cut(s) 543, 1183, 1554, 1774, 1846
TseFI GTSAC 2 cut(s) 853, 1495
TseI GCWGC 7 cut(s) 176, 370, 499, 999, 1298, 1355, 1666
Tsp45I GTSAC 2 cut(s) 853, 1495
TspDTI ATGAA 3 cut(s) 377, 463, 1649
TspGWI ACGGA 4 cut(s) 248, 340, 423, 1686
TspRI CASTG 5 cut(s) 543, 1183, 1554, 1774, 1846
VneI GTGCAC 1 cut(s) 1770
VpaK11BI GGWCC 5 cut(s) 64, 69, 160, 256, 1487
VspI ATTAAT 1 cut(s) 939
XapI RAATTY 1 cut(s) 1419
XcmI CCANNNNNNNNNTGG 2 cut(s) 487, 1366
XhoI CTCGAG 1 cut(s) 341
XmiI GTMKAC 2 cut(s) 78, 576
XmnI GAANNNNTTC 1 cut(s) 329
XspI CTAG 2 cut(s) 1467, 1493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.