Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0001438

Physical Location & Seq

Genomic Coordinates Forward (+)

19557045 .. 19558843

Gene Structure 1799 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g14970.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGTATAAATTGATCGATCGTTCTTCTATTTTGAGTAAATACTGTTTATGTTTAATTTTAAATAAAAAAAATTTAGAAAGATCCCGCGGCGAGGGTCCTCTCTCGATATTCACAACCATCCATGATTCTCAGAAACCCCAACAACCTCTGCATCCGCCAGACCTCCTAGATTTTCTGCCTCCTTCTCCTCTGGTCTCCCAAAAGTCTTCCACTCTTCCCACTCCCCTACCACCCATGGCGGCGAACCCAGAAAATGACGAAAGGACCCTCCACGACGAACTCTCCCTCCCGGTCCTCCTCGCTGATCGCGTCATCAAATCGGCCCAGGAAGCCGAGTCCTCCAAACTCGACTGCGCCGACCTTGCCAAGCAGGTCGACCGCCTCTCCCAAATGCTCCGATCCGCCGTCCGAATCGCCGCCGCCACTCAGTCTCTCTACGATCGCCCCGTCCGCCGAATCGTCGCCGACGTGGCGAAGAACCTTGACCGCGCGCTGAACCTGGTACGGAAATGCAAGCACAGTGGGGTCCTCCGGCAAGTCTTCTCCATCACCACCACTGCTGATTTCAGAAAAGTGTCCAACCTTCTGGAGTCTTCGATTGGAGACATGAAGTGGCTTCTCTCGGTGTTTGAGTCTGACGGCGCCAACCTCTCCCTGCCGCCGATCGCCAGCAACGACCCGATACTCAGCTGGGTCTGGTCATACATCGCAACCATTCAAATGGGTCAACTCAGGGACCGAGTCGACGCGGCTAACTCGCTTGTTTCACTCGCTCGGGACAACGACCGGAACAAGAAGATAATCGTCGACGAAGGCGGCGTGACGCCGCTGCTAAAGCTTCTGAAAGAAGGGTCTTCTCCGGACGCCCAAATCGCCGCCGCCAGTGCTCTGTTTCACATCGCCACTGATCAAGAAAGGGTCCGAATTATAATCGATTTGTTGGGAATTAACGTTGTTGTCTCGGTTTTGGGCGATTCCCCGATGAGGGTTCAGGTGTACGTGGTGAGATTGGTGTCGGAAATGGCGGAGCTTGACCCGGTGGCGCAGGAGGAGCTAGGCAGAGAAAATGTGATTAGGCCTTTGGTGTCTCTGCTGGCAATGGACACGGTTCTGGATGATCCGAAGGTGCAATCGGGTAAGCCTAGCATTCATAATCTTGTTCAGATTAATAAGCAGTTAGCTGTAAATGGTTTGAATCCGAATAGCCGTTTGTCTTCCTTTTCGAATCATTATCATTCGGATGGTAGTAGTAGAGGTGGCGGGCATCATCGAAAAGAGAGGGAGAGAGAGGCGGAGTCCAATCCCGAGGTGAAGCTTGAGCTGAAAGCCGGTTGTGCCAAGGCATTGTGGAAATTGTGTAAAGGGTGTTTGTCGAATAGTCGAAAAGTTACAGAGACGAAAGGGTTGATTTGTTTGGCAAAGATTATTGAGAAGGAAGCAGGGGAGTTGCAGCTGAATTGCTTGATGACTGTGATGGAAATAGCCGTGGTGGCGGAGTCCAATCCCGACCTTAGAAGAGCGGCTTTTAAGCTTAATTCTCCAGCTGCAAATGCAATTTTGGATCGAGCTTTTGAGAGTGATTCAGGAAGAGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008156 GO:0008285 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0019219 GO:0019222 GO:0031261 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0032993 GO:0034641 GO:0034645 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

532

Amino Acids

58.33

Weight (kDa)

8.27

Isoelectric Point (pI)

42.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001438)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26600 AT3G26600
fragaria_vesca	FvH4_4g25480 FvH4_5g06080
malus_domestica	MD06G1167100.v1.1 MD13G1102400.v1.1 MD14G1172700.v1.1 MD16G1102800.v1.1
prunus_persica	Prupe.1G089500_v2.0.a1 Prupe.1G243400_v2.0.a1 Prupe.5G166900_v2.0.a1
pyrus_communis	pycom06g14970 pycom06g14980 pycom13g08950 pycom14g14410 pycom16g08740
rosa_chinensis	RchiOBHm_Chr4g0423211 RchiOBHm_Chr4g0432811 RchiOBHm_Chr7g0192761 RchiOBHm_Chr7g0218041
rosa_laevigata	RLG00000004331 RLG00000006810
rosa_multiflora	Rmu_co8276235.1_g000001 Rmu_sc0001516.1_g000053 Rmu_sc0004101.1_g000049 Rmu_sc0005234.1_g000003 Rmu_sc0008148.1_g000037
rosa_roxburghii	Rroxscaffold_2G00090530 Rroxscaffold_3G00262710 Rroxscaffold_5G00374250 Rroxscaffold_7G00212840
rosa_rugosa	Rorug04G0263100 Rorug07G0004500
rosa_samantha	Rh1AG125500 Rh2AG461900 Rh2CG448900 Rh4AG317200 Rh4AG322300 Rh4BG325400 Rh4CG340300 Rh4DG320600 Rh4DG326400 Rh5BG349900 Rh5CG383400 Rh7AG129500 Rh7AG315400 Rh7BG130800 Rh7CG061100 Rh7CG134200 Rh7DG131700
rosa_wichuraiana	Rw4G027590 Rw7G011080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	929
Acc36I	ACCTGC	1 cut(s)	361
AccB1I	GGYRCC	1 cut(s)	641
AccBSI	CCGCTC	1 cut(s)	1520
AccI	GTMKAC	3 cut(s)	375, 744, 807
AccII	CGCG	5 cut(s)	87, 309, 489, 491, 749
AccIII	TCCGGA	1 cut(s)	859
AclI	AACGTT	1 cut(s)	951
AclWI	GGATC	4 cut(s)	75, 393, 1112, 1569
AcsI	RAATTY	1 cut(s)	70
AcyI	GRCGYC	3 cut(s)	642, 824, 864
AfaI	GTAC	2 cut(s)	504, 998
AfiI	CCNNNNNNNGG	3 cut(s)	91, 984, 985
AgsI	TTSAA	2 cut(s)	719, 1195
AjiI	CACGTC	1 cut(s)	469
AjnI	CCWGG	2 cut(s)	324, 498
AloI	GAACNNNNNNTCC	2 cut(s)	270, 302
Alw21I	GWGCWC	1 cut(s)	889
Alw26I	GTCTC	6 cut(s)	199, 435, 597, 964, 1092, 1388
AlwI	GGATC	4 cut(s)	75, 393, 1112, 1569
Ama87I	CYCGRG	2 cut(s)	774, 1304
Aor13HI	TCCGGA	1 cut(s)	859
AoxI	GGCC	2 cut(s)	321, 1076
ApeKI	GCWGC	3 cut(s)	829, 1450, 1544
ApoI	RAATTY	1 cut(s)	70
AseI	ATTAAT	1 cut(s)	1167
AspLEI	GCGC	5 cut(s)	356, 491, 493, 644, 1045
AspS9I	GGNCC	7 cut(s)	95, 264, 292, 322, 526, 736, 919
AsuC2I	CCSGG	2 cut(s)	290, 1037
AsuHPI	GGTGA	3 cut(s)	541, 1015, 1321
AsuII	TTCGAA	1 cut(s)	1223
AvaI	CYCGRG	2 cut(s)	774, 1304
AvaII	GGWCC	6 cut(s)	95, 264, 292, 526, 736, 919
BanI	GGYRCC	1 cut(s)	641
BbsI	GAAGAC	5 cut(s)	198, 532, 585, 846, 1206
Bbv12I	GWGCWC	1 cut(s)	889
BbvI	GCAGC	3 cut(s)	816, 1462, 1531
BccI	CCATC	4 cut(s)	125, 554, 1235, 1468
BceAI	ACGGC	4 cut(s)	389, 655, 1191, 1469
BciT130I	CCWGG	2 cut(s)	326, 500
BclI	TGATCA	1 cut(s)	907
BcnI	CCSGG	2 cut(s)	290, 1037
BcoDI	GTCTC	6 cut(s)	199, 435, 597, 964, 1092, 1388
BfaI	CTAG	3 cut(s)	167, 1055, 1143
BfoI	RGCGCY	1 cut(s)	645
BfuAI	ACCTGC	1 cut(s)	361
BglI	GCCNNNNNGGC	2 cut(s)	470, 1490
Bme1390I	CCNGG	4 cut(s)	290, 326, 500, 1037
Bme18I	GGWCC	6 cut(s)	95, 264, 292, 526, 736, 919
BmeT110I	CYCGRG	2 cut(s)	774, 1304
BmgBI	CACGTC	1 cut(s)	469
BmgT120I	GGNCC	7 cut(s)	95, 264, 292, 322, 526, 736, 919
BmiI	GGNNCC	6 cut(s)	96, 266, 527, 643, 737, 920
BmrFI	CCNGG	4 cut(s)	290, 326, 500, 1037
BmsI	GCATC	2 cut(s)	160, 1273
BpiI	GAAGAC	5 cut(s)	198, 532, 585, 846, 1206
BpmI	CTGGAG	2 cut(s)	608, 1524
Bpu14I	TTCGAA	1 cut(s)	1223
BpuEI	CTTGAG	1 cut(s)	1337
BpuMI	CCSGG	2 cut(s)	290, 1037
Bsa29I	ATCGAT	2 cut(s)	15, 933
BsaAI	YACGTR	1 cut(s)	1000
BsaHI	GRCGYC	3 cut(s)	642, 824, 864
BsaI	GGTCTC	1 cut(s)	199
BsaJI	CCNNGG	6 cut(s)	85, 234, 324, 1305, 1338, 1485
BsaWI	WCCGGW	2 cut(s)	786, 859
BsaXI	ACNNNNNCTCC	6 cut(s)	266, 270, 296, 300, 368, 398
Bsc4I	CCNNNNNNNGG	3 cut(s)	91, 984, 985
Bse118I	RCCGGY	1 cut(s)	1328
Bse1I	ACTGG	1 cut(s)	882
Bse3DI	GCAATG	1 cut(s)	1104
BseAI	TCCGGA	1 cut(s)	859
BseBI	CCWGG	2 cut(s)	326, 500
BseCI	ATCGAT	2 cut(s)	15, 933
BseDI	CCNNGG	6 cut(s)	85, 234, 324, 1305, 1338, 1485
BseGI	GGATG	4 cut(s)	117, 151, 1120, 1246
BseLI	CCNNNNNNNGG	3 cut(s)	91, 984, 985
BseMI	GCAATG	1 cut(s)	1104
BseMII	CTCAG	4 cut(s)	143, 440, 700, 745
BseNI	ACTGG	1 cut(s)	882
BsePI	GCGCGC	1 cut(s)	489
BseRI	GAGGAG	3 cut(s)	177, 287, 1064
BseXI	GCAGC	3 cut(s)	816, 1462, 1531
BseYI	CCCAGC	1 cut(s)	690
Bsh1236I	CGCG	5 cut(s)	87, 309, 489, 491, 749
Bsh1285I	CGRYCG	5 cut(s)	19, 379, 442, 666, 787
BshFI	GGCC	2 cut(s)	323, 1078
BshNI	GGYRCC	1 cut(s)	641
BshVI	ATCGAT	2 cut(s)	15, 933
BsiEI	CGRYCG	5 cut(s)	19, 379, 442, 666, 787
BsiHKAI	GWGCWC	1 cut(s)	889
BsiHKCI	CYCGRG	2 cut(s)	774, 1304
BsiSI	CCGG	6 cut(s)	290, 532, 787, 860, 1037, 1329
BslFI	GGGAC	2 cut(s)	749, 791
BslI	CCNNNNNNNGG	3 cut(s)	91, 984, 985
BsmAI	GTCTC	6 cut(s)	199, 435, 597, 964, 1092, 1388
BsmBI	CGTCTC	1 cut(s)	1388
BsmFI	GGGAC	2 cut(s)	749, 791
BsmI	GAATGC	1 cut(s)	1146
BsnI	GGCC	2 cut(s)	323, 1078
Bso31I	GGTCTC	1 cut(s)	199
BsoBI	CYCGRG	2 cut(s)	774, 1304
Bsp119I	TTCGAA	1 cut(s)	1223
Bsp1286I	GDGCHC	1 cut(s)	889
Bsp13I	TCCGGA	1 cut(s)	859
Bsp19I	CCATGG	1 cut(s)	234
BspANI	GGCC	2 cut(s)	323, 1078
BspCNI	CTCAG	4 cut(s)	142, 439, 699, 744
BspDI	ATCGAT	2 cut(s)	15, 933
BspEI	TCCGGA	1 cut(s)	859
BspFNI	CGCG	5 cut(s)	87, 309, 489, 491, 749
BspLI	GGNNCC	6 cut(s)	96, 266, 527, 643, 737, 920
BspMI	ACCTGC	1 cut(s)	361
BspPI	GGATC	4 cut(s)	75, 393, 1112, 1569
BspQI	GCTCTTC	1 cut(s)	1510
BspT104I	TTCGAA	1 cut(s)	1223
BspT107I	GGYRCC	1 cut(s)	641
BspTNI	GGTCTC	1 cut(s)	199
BsrBI	CCGCTC	1 cut(s)	1520
BsrDI	GCAATG	1 cut(s)	1104
BsrFI	RCCGGY	1 cut(s)	1328
BsrI	ACTGG	1 cut(s)	882
BssAI	RCCGGY	1 cut(s)	1328
BssECI	CCNNGG	6 cut(s)	85, 234, 324, 1305, 1338, 1485
BssHII	GCGCGC	1 cut(s)	489
BssNI	GRCGYC	3 cut(s)	642, 824, 864
BssT1I	CCWWGG	2 cut(s)	234, 1338
Bst2UI	CCWGG	2 cut(s)	326, 500
Bst4CI	ACNGT	4 cut(s)	44, 521, 1108, 1471
Bst6I	CTCTTC	3 cut(s)	219, 1510, 1582
BstACI	GRCGYC	3 cut(s)	642, 824, 864
BstBAI	YACGTR	1 cut(s)	1000
BstBI	TTCGAA	1 cut(s)	1223
BstC8I	GCNNGC	5 cut(s)	491, 515, 670, 1095, 1262
BstDEI	CTNAG	5 cut(s)	129, 426, 686, 731, 1511
BstDSI	CCRYGG	3 cut(s)	85, 234, 1485
BstF5I	GGATG	4 cut(s)	117, 151, 1120, 1246
BstFNI	CGCG	5 cut(s)	87, 309, 489, 491, 749
BstH2I	RGCGCY	1 cut(s)	645
BstHHI	GCGC	5 cut(s)	356, 491, 493, 644, 1045
BstMAI	GTCTC	6 cut(s)	199, 435, 597, 964, 1092, 1388
BstMCI	CGRYCG	5 cut(s)	19, 379, 442, 666, 787
BstNI	CCWGG	2 cut(s)	326, 500
BstSCI	CCNGG	4 cut(s)	288, 324, 498, 1035
BstUI	CGCG	5 cut(s)	87, 309, 489, 491, 749
BstV1I	GCAGC	3 cut(s)	816, 1462, 1531
BstV2I	GAAGAC	5 cut(s)	198, 532, 585, 846, 1206
BstX2I	RGATCY	1 cut(s)	80
BstXI	CCANNNNNNTGG	2 cut(s)	586, 721
BstYI	RGATCY	1 cut(s)	80
Bsu15I	ATCGAT	2 cut(s)	15, 933
BsuRI	GGCC	2 cut(s)	323, 1078
BsuTUI	ATCGAT	2 cut(s)	15, 933
BtgI	CCRYGG	3 cut(s)	85, 234, 1485
BtgZI	GCGATG	2 cut(s)	691, 883
BtrI	CACGTC	1 cut(s)	469
BtsCI	GGATG	4 cut(s)	117, 151, 1120, 1246
BtsI	GCAGTG	1 cut(s)	555
BtsIMutI	CAGTG	4 cut(s)	526, 555, 889, 903
BveI	ACCTGC	1 cut(s)	361
Cac8I	GCNNGC	5 cut(s)	491, 515, 670, 1095, 1262
CfoI	GCGC	5 cut(s)	356, 491, 493, 644, 1045
Cfr10I	RCCGGY	1 cut(s)	1328
Cfr13I	GGNCC	7 cut(s)	95, 264, 292, 322, 526, 736, 919
Cfr42I	CCGCGG	1 cut(s)	88
ClaI	ATCGAT	2 cut(s)	15, 933
CseI	GACGC	4 cut(s)	298, 755, 832, 872
CsiI	ACCWGGT	1 cut(s)	498
Csp6I	GTAC	2 cut(s)	503, 997
CspCI	CAANNNNNGTGG	2 cut(s)	502, 537
CviAII	CATG	3 cut(s)	122, 235, 607
CviQI	GTAC	2 cut(s)	503, 997
DdeI	CTNAG	5 cut(s)	129, 426, 686, 731, 1511
DinI	GGCGCC	1 cut(s)	643
DraI	TTTAAA	1 cut(s)	60
Eam1104I	CTCTTC	3 cut(s)	219, 1510, 1582
EarI	CTCTTC	3 cut(s)	219, 1510, 1582
EciI	GGCGGA	6 cut(s)	144, 391, 440, 1040, 1307, 1508
Eco130I	CCWWGG	2 cut(s)	234, 1338
Eco147I	AGGCCT	1 cut(s)	1078
Eco31I	GGTCTC	1 cut(s)	199
Eco47I	GGWCC	6 cut(s)	95, 264, 292, 526, 736, 919
Eco88I	CYCGRG	2 cut(s)	774, 1304
EcoO109I	RGGNCCY	3 cut(s)	95, 264, 526
EcoRII	CCWGG	2 cut(s)	324, 498
EcoT14I	CCWWGG	2 cut(s)	234, 1338
EgeI	GGCGCC	1 cut(s)	643
EheI	GGCGCC	1 cut(s)	643
ErhI	CCWWGG	2 cut(s)	234, 1338
Esp3I	CGTCTC	1 cut(s)	1388
FaeI	CATG	3 cut(s)	125, 238, 610
FaiI	YATR	8 cut(s)	6, 49, 123, 236, 608, 703, 929, 1152
FalI	AAGNNNNNCTT	2 cut(s)	1507, 1539
FaqI	GGGAC	2 cut(s)	749, 791
FatI	CATG	3 cut(s)	121, 234, 606
FauI	CCCGC	2 cut(s)	92, 1253
FbaI	TGATCA	1 cut(s)	907
FblI	GTMKAC	3 cut(s)	375, 744, 807
FokI	GGATG	4 cut(s)	104, 138, 1127, 1253
FspBI	CTAG	3 cut(s)	167, 1055, 1143
GlaI	GCGC	5 cut(s)	355, 490, 492, 643, 1044
GsaI	CCCAGC	1 cut(s)	694
GsuI	CTGGAG	2 cut(s)	608, 1524
HaeII	RGCGCY	1 cut(s)	645
HaeIII	GGCC	2 cut(s)	323, 1078
HapII	CCGG	6 cut(s)	290, 532, 787, 860, 1037, 1329
HgaI	GACGC	4 cut(s)	298, 755, 832, 872
HhaI	GCGC	5 cut(s)	356, 491, 493, 644, 1045
Hin1I	GRCGYC	3 cut(s)	642, 824, 864
Hin1II	CATG	3 cut(s)	125, 238, 610
Hin6I	GCGC	5 cut(s)	354, 489, 491, 642, 1043
HinP1I	GCGC	5 cut(s)	354, 489, 491, 642, 1043
HincII	GTYRAC	4 cut(s)	376, 728, 745, 808
HindII	GTYRAC	4 cut(s)	376, 728, 745, 808
HindIII	AAGCTT	3 cut(s)	836, 1313, 1529
HpaII	CCGG	6 cut(s)	290, 532, 787, 860, 1037, 1329
HphI	GGTGA	3 cut(s)	541, 1015, 1321
Hpy166II	GTNNAC	5 cut(s)	376, 728, 745, 808, 997
Hpy188III	TCNNGA	9 cut(s)	103, 587, 776, 860, 911, 1112, 1304, 1505, 1584
Hpy8I	GTNNAC	5 cut(s)	376, 728, 745, 808, 997
Hpy99I	CGWCG	6 cut(s)	278, 464, 470, 749, 809, 812
HpyAV	CCTTC	6 cut(s)	192, 593, 806, 842, 1117, 1426
HpyCH4III	ACNGT	4 cut(s)	44, 521, 1108, 1471
HpyCH4IV	ACGT	3 cut(s)	468, 951, 999
HpyCH4V	TGCA	6 cut(s)	151, 513, 1129, 1450, 1547, 1553
HpyF3I	CTNAG	5 cut(s)	129, 426, 686, 731, 1511
HpySE526I	ACGT	3 cut(s)	468, 951, 999
Hsp92I	GRCGYC	3 cut(s)	642, 824, 864
Hsp92II	CATG	3 cut(s)	125, 238, 610
HspAI	GCGC	5 cut(s)	354, 489, 491, 642, 1043
KasI	GGCGCC	1 cut(s)	641
Kpn2I	TCCGGA	1 cut(s)	859
Ksp22I	TGATCA	1 cut(s)	907
KspI	CCGCGG	1 cut(s)	88
LguI	GCTCTTC	1 cut(s)	1510
LmnI	GCTCC	3 cut(s)	399, 1027, 1051
Lsp1109I	GCAGC	3 cut(s)	816, 1462, 1531
LweI	GCATC	2 cut(s)	160, 1273
MabI	ACCWGGT	1 cut(s)	498
MaeI	CTAG	3 cut(s)	167, 1055, 1143
MaeII	ACGT	3 cut(s)	468, 951, 999
MaeIII	GTNAC	2 cut(s)	820, 1387
MbiI	CCGCTC	1 cut(s)	1520
MflI	RGATCY	1 cut(s)	80
MhlI	GDGCHC	1 cut(s)	889
MluCI	AATT	9 cut(s)	8, 54, 70, 924, 945, 1352, 1456, 1534, 1554
Mly113I	GGCGCC	1 cut(s)	642
MlyI	GAGTC	6 cut(s)	344, 599, 641, 750, 1304, 1505
MmeI	TCCRAC	2 cut(s)	603, 996
MroI	TCCGGA	1 cut(s)	859
MseI	TTAA	6 cut(s)	53, 59, 948, 1167, 1527, 1533
MslI	CAYNNNNRTG	2 cut(s)	719, 1239
MspA1I	CMGCKG	5 cut(s)	87, 690, 829, 1453, 1544
MspI	CCGG	6 cut(s)	290, 532, 787, 860, 1037, 1329
MspR9I	CCNGG	4 cut(s)	290, 326, 500, 1037
Mva1269I	GAATGC	1 cut(s)	1146
MvaI	CCWGG	2 cut(s)	326, 500
MvnI	CGCG	5 cut(s)	87, 309, 489, 491, 749
NarI	GGCGCC	1 cut(s)	642
NciI	CCSGG	2 cut(s)	290, 1037
NcoI	CCATGG	1 cut(s)	234
NlaIII	CATG	3 cut(s)	125, 238, 610
NlaIV	GGNNCC	6 cut(s)	96, 266, 527, 643, 737, 920
NmeAIII	GCCGAG	1 cut(s)	358
NmuCI	GTSAC	1 cut(s)	820
NspV	TTCGAA	1 cut(s)	1223
PauI	GCGCGC	1 cut(s)	489
PceI	AGGCCT	1 cut(s)	1078
PciSI	GCTCTTC	1 cut(s)	1510
PcsI	WCGNNNNNNNCGW	6 cut(s)	306, 354, 444, 465, 672, 816
PctI	GAATGC	1 cut(s)	1146
PfeI	GAWTC	7 cut(s)	125, 411, 456, 974, 1195, 1225, 1580
PflFI	GACNNNGTC	1 cut(s)	740
Ple19I	CGATCG	3 cut(s)	19, 442, 666
PleI	GAGTC	6 cut(s)	343, 598, 640, 749, 1303, 1504
PluTI	GGCGCC	1 cut(s)	645
PpsI	GAGTC	6 cut(s)	343, 598, 640, 749, 1303, 1504
Ppu21I	YACGTR	1 cut(s)	1000
PpuMI	RGGWCCY	3 cut(s)	95, 264, 526
PshBI	ATTAAT	1 cut(s)	1167
PsiI	TTATAA	1 cut(s)	929
Psp1406I	AACGTT	1 cut(s)	951
Psp5II	RGGWCCY	3 cut(s)	95, 264, 526
Psp6I	CCWGG	2 cut(s)	324, 498
PspFI	CCCAGC	1 cut(s)	690
PspGI	CCWGG	2 cut(s)	324, 498
PspN4I	GGNNCC	6 cut(s)	96, 266, 527, 643, 737, 920
PspPI	GGNCC	7 cut(s)	95, 264, 292, 322, 526, 736, 919
PspPPI	RGGWCCY	3 cut(s)	95, 264, 526
PsuI	RGATCY	1 cut(s)	80
PsyI	GACNNNGTC	1 cut(s)	740
PteI	GCGCGC	1 cut(s)	489
PvuI	CGATCG	3 cut(s)	19, 442, 666
PvuII	CAGCTG	3 cut(s)	690, 1453, 1544
RsaI	GTAC	2 cut(s)	504, 998
RsaNI	GTAC	2 cut(s)	503, 997
RseI	CAYNNNNRTG	2 cut(s)	719, 1239
SacII	CCGCGG	1 cut(s)	88
SalI	GTCGAC	3 cut(s)	374, 743, 806
SapI	GCTCTTC	1 cut(s)	1510
SaqAI	TTAA	6 cut(s)	53, 59, 948, 1167, 1527, 1533
Sau96I	GGNCC	7 cut(s)	95, 264, 292, 322, 526, 736, 919
SchI	GAGTC	6 cut(s)	344, 599, 641, 750, 1304, 1505
ScrFI	CCNGG	4 cut(s)	290, 326, 500, 1037
SduI	GDGCHC	1 cut(s)	889
SexAI	ACCWGGT	1 cut(s)	498
SfaNI	GCATC	2 cut(s)	160, 1273
SfoI	GGCGCC	1 cut(s)	643
Sfr303I	CCGCGG	1 cut(s)	88
SfuI	TTCGAA	1 cut(s)	1223
SgrBI	CCGCGG	1 cut(s)	88
SgrDI	CGTCGACG	1 cut(s)	806
SinI	GGWCC	6 cut(s)	95, 264, 292, 526, 736, 919
SmiMI	CAYNNNNRTG	2 cut(s)	719, 1239
SmlI	CTYRAG	1 cut(s)	1316
SmoI	CTYRAG	1 cut(s)	1316
Sse9I	AATT	9 cut(s)	8, 54, 70, 924, 945, 1352, 1456, 1534, 1554
SseBI	AGGCCT	1 cut(s)	1078
SspDI	GGCGCC	1 cut(s)	641
SspMI	CTAG	3 cut(s)	167, 1055, 1143
StuI	AGGCCT	1 cut(s)	1078
StyD4I	CCNGG	4 cut(s)	288, 324, 498, 1035
StyI	CCWWGG	2 cut(s)	234, 1338
TaaI	ACNGT	4 cut(s)	44, 521, 1108, 1471
TaiI	ACGT	3 cut(s)	471, 954, 1002
TaqII	GACCGA	1 cut(s)	753
TasI	AATT	9 cut(s)	8, 54, 70, 924, 945, 1352, 1456, 1534, 1554
TfiI	GAWTC	7 cut(s)	125, 411, 456, 974, 1195, 1225, 1580
Tru1I	TTAA	6 cut(s)	53, 59, 948, 1167, 1527, 1533
Tru9I	TTAA	6 cut(s)	53, 59, 948, 1167, 1527, 1533
TscAI	CASTG	4 cut(s)	526, 562, 889, 910
TseFI	GTSAC	1 cut(s)	820
TseI	GCWGC	3 cut(s)	829, 1450, 1544
Tsp45I	GTSAC	1 cut(s)	820
TspDTI	ATGAA	2 cut(s)	623, 1139
TspGWI	ACGGA	1 cut(s)	520
TspRI	CASTG	4 cut(s)	526, 562, 889, 910
Tth111I	GACNNNGTC	1 cut(s)	740
VpaK11BI	GGWCC	6 cut(s)	95, 264, 292, 526, 736, 919
VspI	ATTAAT	1 cut(s)	1167
XapI	RAATTY	1 cut(s)	70
XmiI	GTMKAC	3 cut(s)	375, 744, 807
XspI	CTAG	3 cut(s)	167, 1055, 1143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.