Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0001438

Physical Location & Seq

Genomic Coordinates Forward (+)

10320841 .. 10322688

Gene Structure 1848 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG129500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGGCCGCCGCCGCCGCCGCCCCCGAAAATGACGAAAAGACCCTCCAAGAGGAGCTGTGCCTCCCCATCCTCCTCGCGGATCGGGTCCTCAAGTCGGCCCACGAGGCCGAGTCGTCCAAGCCCGAGTGCGCCGACCTGGCCCACCAAGTCGACCGCCTCTCCCAGATGCTCCGATCCGCCGTCCGCATCGCCGCCGCGTCCCCCTCCCTCTACGAGCGCCCCGTCCGACGCATCGCGGCCGACGTGGCGAAGAACCTGGACCGCGCGCTCAGCCTCGTCCGCAAGTGCAAGCACAGCGGCGTCCTCCGCCAGGTGTTCTCCATCACCACCGCCGCCGACTTCCGCAAGGTGTCGAACCTCCTCGAGTCGTCGATCGGCGACATGAAGTGGCTCCTGTCGGTGTTCGAGTCGGACGGCGCCAACCTCTCCCTGCCGCCCATCGCCAGCAACGACCCGATTCTGAGCTGGGTGTGGTCCTACATCGCCACCATTCAGATGGGTCAGCTCCGGGACCGAGTGGAGGCGGCGAGTTCGCTCGTCTCGCTGGCGAGGGACAACGACCGGAACAAGAAGATAATTGTTGACGAGGGAGGAGTGACGCCGCTGCTCAAGCTTTTGAAAGAGGGGTCTTCGGCGGAGGCACAGATTGCTGCGGCGAATGCTCTGTTTCATATCGCTACGGACCAGGAGAGGGTTCGGACTGTAATCGAGTTGAATGGGATTCCGATGATAGTTTCGGTTTTGGGGGATTCGCCGATGAGGGTTCAGGCGGAGGTGGTGAGATTGGTGGCCGAAATGGCGGAGCTTGACCCGATTGCGCAGGAGTACTTTGCCAGAGAAAATGTGACTAGGCCGTTGGTGTCTCTGTTGGCTATGGATACGGTTCTGGATGAGCCGAAACCGCAGTCGGGTAAGCCCAGCATTCATTCGCTTGTGATTAATAAGGAGTTGGTAGGAAAGGGGGCGAATTCGAGTAGTAGGTTGGGGTCCTTTAGTTCGAGTCATTATCATTCTGATGGGAGTAGTAGAGGCGGGCATTATAGGAAAGATAGGGAGAGAGAGGTTGAGAGCCCTGAGGTCAAGCTCAACCTCAAGGTTGGTTGTGCTGAGGCATTGTGGAAGTTGTGTAGAGATTGTTTGTTGAATAGTCAAAAAGTTACAGAGACTAAAGGGTTGATTTGTTTGGCCAAGATTGTTGACAAGGAGGTTGGGGAATTGCAGCTTAATTGCTTGATGACTGTGATGGAAATAGCTGCAGTGGCAGAGTCAAATCCAGAGCTTAGACGATCGGCTTTTAAGCCCAACTCTCCAGCTGCAAAGGCAGTTGTCGATCAGCTTATGAGGGTTATTCAAGAAGAGGGTAACCCGGATCTGCAAATACCGGCAATCAAGGCAATTGGGTCACTCGCAAGAACTTTTGCCGCCAGGGAAACCCGGATAGTTGGTCCTTTGGTTGCGCGGCTGGGTAATGTGAATGTGGATGTGGCAACTGAGGCTGCCATTGCATTGGGAAAGTTTGTGTGCTTGGAGAACTTCAACCGAGTAGAGCATTCCAAGACGATAATTGAGTTCGATGGGGTTCCTTCTCTGATGAGATTGTTGAAGGCTACTGATCGGACCAACGAACTTGCTCACTTGCACTGCCTAGAACTATTATGTTACCTCGCATTGCACGTAGGCAATAGCAAAGCTCTCGAACAAGCACAGGTGTTGAGTACTCTCGAGGGGGGAGCTCGTTCTGCTGTGGCACAAAATCCAGATTTGAAGGAGTTGTTTTCCAAAGCCATACACCATCTCAGTCTTTATCAGCCTGGAGCTCATCCCCACAGGCAAACTTTCATGCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008156 GO:0008285 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0019219 GO:0019222 GO:0031261 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0032993 GO:0034641 GO:0034645 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

615

Amino Acids

67.12

Weight (kDa)

6.62

Isoelectric Point (pI)

34.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7792	PF25055	16 - 135	1e-49	Domain of unknown function (DUF7792)
ARM_PUB	PF25598	169 - 449	2.3e-07	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001438)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26600 AT3G26600
fragaria_vesca	FvH4_4g25480 FvH4_5g06080
malus_domestica	MD06G1167100.v1.1 MD13G1102400.v1.1 MD14G1172700.v1.1 MD16G1102800.v1.1
prunus_persica	Prupe.1G089500_v2.0.a1 Prupe.1G243400_v2.0.a1 Prupe.5G166900_v2.0.a1
pyrus_communis	pycom06g14970 pycom06g14980 pycom13g08950 pycom14g14410 pycom16g08740
rosa_chinensis	RchiOBHm_Chr4g0423211 RchiOBHm_Chr4g0432811 RchiOBHm_Chr7g0192761 RchiOBHm_Chr7g0218041
rosa_laevigata	RLG00000004331 RLG00000006810
rosa_multiflora	Rmu_co8276235.1_g000001 Rmu_sc0001516.1_g000053 Rmu_sc0004101.1_g000049 Rmu_sc0005234.1_g000003 Rmu_sc0008148.1_g000037
rosa_roxburghii	Rroxscaffold_2G00090530 Rroxscaffold_3G00262710 Rroxscaffold_5G00374250 Rroxscaffold_7G00212840
rosa_rugosa	Rorug04G0263100 Rorug07G0004500
rosa_samantha	Rh1AG125500 Rh2AG461900 Rh2CG448900 Rh4AG317200 Rh4AG322300 Rh4BG325400 Rh4CG340300 Rh4DG320600 Rh4DG326400 Rh5BG349900 Rh5CG383400 Rh7AG129500 Rh7AG315400 Rh7BG130800 Rh7CG061100 Rh7CG134200 Rh7DG131700
rosa_wichuraiana	Rw4G027590 Rw7G011080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	819
AccB1I	GGYRCC	1 cut(s)	416
AccI	GTMKAC	1 cut(s)	150
AccII	CGCG	6 cut(s)	77, 197, 236, 264, 266, 1459
AclWI	GGATC	3 cut(s)	87, 168, 1377
AcoI	YGGCCR	4 cut(s)	3, 237, 789, 1185
AcsI	RAATTY	1 cut(s)	967
AcyI	GRCGYC	3 cut(s)	300, 417, 599
AfaI	GTAC	2 cut(s)	827, 1717
AfiI	CCNNNNNNNGG	7 cut(s)	49, 76, 94, 310, 520, 691, 908
AgsI	TTSAA	7 cut(s)	619, 715, 1144, 1352, 1537, 1603, 1765
AjiI	CACGTC	1 cut(s)	244
AjnI	CCWGG	6 cut(s)	135, 255, 309, 684, 1424, 1810
Alw21I	GWGCWC	2 cut(s)	1735, 1819
Alw26I	GTCTC	3 cut(s)	544, 867, 1157
AlwI	GGATC	3 cut(s)	87, 168, 1377
Ama87I	CYCGRG	3 cut(s)	122, 362, 1721
AoxI	GGCC	8 cut(s)	3, 96, 105, 138, 237, 789, 851, 1185
ApeKI	GCWGC	6 cut(s)	604, 650, 1219, 1253, 1313, 1496
ApoI	RAATTY	1 cut(s)	967
ArsI	GACNNNNNNTTYG	2 cut(s)	890, 922
AseI	ATTAAT	1 cut(s)	939
AspLEI	GCGC	7 cut(s)	131, 219, 266, 268, 419, 820, 1459
AsuC2I	CCSGG	3 cut(s)	509, 1367, 1435
AsuHPI	GGTGA	2 cut(s)	316, 790
AvaI	CYCGRG	3 cut(s)	122, 362, 1721
AvaII	GGWCC	8 cut(s)	85, 259, 474, 511, 682, 987, 1445, 1617
AxyI	CCTNAGG	1 cut(s)	1074
BalI	TGGCCA	1 cut(s)	1187
BanI	GGYRCC	1 cut(s)	416
BanII	GRGCYC	3 cut(s)	1073, 1735, 1819
BauI	CACGAG	1 cut(s)	101
BbsI	GAAGAC	1 cut(s)	621
Bbv12I	GWGCWC	2 cut(s)	1735, 1819
BbvCI	CCTCAGC	1 cut(s)	1107
BbvI	GCAGC	6 cut(s)	591, 637, 1231, 1240, 1300, 1483
BccI	CCATC	8 cut(s)	74, 329, 446, 490, 1010, 1237, 1568, 1800
BceAI	ACGGC	3 cut(s)	164, 430, 838
BcgI	CGANNNNNNTGC	2 cut(s)	1675, 1709
BciT130I	CCWGG	6 cut(s)	137, 257, 311, 686, 1426, 1812
BciVI	GTATCC	1 cut(s)	871
BcnI	CCSGG	3 cut(s)	509, 1367, 1435
BcoDI	GTCTC	3 cut(s)	544, 867, 1157
BfaI	CTAG	2 cut(s)	849, 1646
BfmI	CTRYAG	1 cut(s)	1254
BfoI	RGCGCY	2 cut(s)	220, 420
BfuI	GTATCC	1 cut(s)	871
BglI	GCCNNNNNGGC	4 cut(s)	104, 137, 245, 797
BlpI	GCTNAGC	1 cut(s)	269
BmcAI	AGTACT	2 cut(s)	827, 1717
Bme1390I	CCNGG	9 cut(s)	137, 257, 311, 509, 686, 1367, 1426, 1435, 1812
Bme18I	GGWCC	8 cut(s)	85, 259, 474, 511, 682, 987, 1445, 1617
BmeT110I	CYCGRG	3 cut(s)	122, 362, 1721
BmgBI	CACGTC	1 cut(s)	244
BmiI	GGNNCC	6 cut(s)	86, 392, 418, 512, 988, 1581
BmrFI	CCNGG	9 cut(s)	137, 257, 311, 509, 686, 1367, 1426, 1435, 1812
BmsI	GCATC	3 cut(s)	156, 195, 240
BpiI	GAAGAC	1 cut(s)	621
BpmI	CTGGAG	2 cut(s)	1293, 1833
Bpu10I	CCTNAGC	1 cut(s)	1107
Bpu1102I	GCTNAGC	1 cut(s)	269
BpuEI	CTTGAG	3 cut(s)	74, 593, 1076
BpuMI	CCSGG	3 cut(s)	509, 1367, 1435
BsaAI	YACGTR	1 cut(s)	1675
BsaHI	GRCGYC	3 cut(s)	300, 417, 599
BsaJI	CCNNGG	1 cut(s)	1425
BsaWI	WCCGGW	1 cut(s)	561
BsaXI	ACNNNNNCTCC	2 cut(s)	143, 173
Bsc4I	CCNNNNNNNGG	7 cut(s)	49, 76, 94, 310, 520, 691, 908
Bse118I	RCCGGY	1 cut(s)	1381
Bse21I	CCTNAGG	1 cut(s)	1074
Bse3DI	GCAATG	2 cut(s)	1500, 1667
BseBI	CCWGG	6 cut(s)	137, 257, 311, 686, 1426, 1812
BseDI	CCNNGG	1 cut(s)	1425
BseGI	GGATG	4 cut(s)	66, 895, 1486, 1819
BseLI	CCNNNNNNNGG	7 cut(s)	49, 76, 94, 310, 520, 691, 908
BseMI	GCAATG	2 cut(s)	1500, 1667
BseMII	CTCAG	6 cut(s)	283, 452, 1065, 1098, 1482, 1810
BsePI	GCGCGC	1 cut(s)	264
BseRI	GAGGAG	4 cut(s)	62, 65, 350, 606
BseX3I	CGGCCG	1 cut(s)	237
BseXI	GCAGC	6 cut(s)	591, 637, 1231, 1240, 1300, 1483
BseYI	CCCAGC	3 cut(s)	465, 917, 1462
Bsh1236I	CGCG	6 cut(s)	77, 197, 236, 264, 266, 1459
Bsh1285I	CGRYCG	5 cut(s)	154, 240, 375, 562, 1289
BshFI	GGCC	8 cut(s)	5, 98, 107, 140, 239, 791, 853, 1187
BshNI	GGYRCC	1 cut(s)	416
BsiEI	CGRYCG	5 cut(s)	154, 240, 375, 562, 1289
BsiHKAI	GWGCWC	2 cut(s)	1735, 1819
BsiHKCI	CYCGRG	3 cut(s)	122, 362, 1721
BsiSI	CCGG	5 cut(s)	508, 562, 1367, 1382, 1435
BslFI	GGGAC	3 cut(s)	184, 524, 566
BslI	CCNNNNNNNGG	7 cut(s)	49, 76, 94, 310, 520, 691, 908
BsmAI	GTCTC	3 cut(s)	544, 867, 1157
BsmBI	CGTCTC	1 cut(s)	544
BsmFI	GGGAC	3 cut(s)	184, 524, 566
BsmI	GAATGC	3 cut(s)	664, 921, 1549
BsnI	GGCC	8 cut(s)	5, 98, 107, 140, 239, 791, 853, 1187
BsoBI	CYCGRG	3 cut(s)	122, 362, 1721
Bsp1286I	GDGCHC	3 cut(s)	1073, 1735, 1819
Bsp143I	GATC	7 cut(s)	79, 173, 372, 1286, 1330, 1369, 1612
Bsp1720I	GCTNAGC	1 cut(s)	269
BspANI	GGCC	8 cut(s)	5, 98, 107, 140, 239, 791, 853, 1187
BspCNI	CTCAG	6 cut(s)	282, 453, 1066, 1099, 1483, 1809
BspFNI	CGCG	6 cut(s)	77, 197, 236, 264, 266, 1459
BspLI	GGNNCC	6 cut(s)	86, 392, 418, 512, 988, 1581
BspMAI	CTGCAG	1 cut(s)	1258
BspPI	GGATC	3 cut(s)	87, 168, 1377
BspT107I	GGYRCC	1 cut(s)	416
BsrDI	GCAATG	2 cut(s)	1500, 1667
BsrFI	RCCGGY	1 cut(s)	1381
BssAI	RCCGGY	1 cut(s)	1381
BssECI	CCNNGG	1 cut(s)	1425
BssHII	GCGCGC	1 cut(s)	264
BssMI	GATC	7 cut(s)	79, 173, 372, 1286, 1330, 1369, 1612
BssNI	GRCGYC	3 cut(s)	300, 417, 599
BssSI	CACGAG	1 cut(s)	101
Bst2BI	CACGAG	1 cut(s)	101
Bst2UI	CCWGG	6 cut(s)	137, 257, 311, 686, 1426, 1812
Bst4CI	ACNGT	3 cut(s)	703, 883, 1240
Bst6I	CTCTTC	1 cut(s)	1350
BstACI	GRCGYC	3 cut(s)	300, 417, 599
BstAPI	GCANNNNNTGC	1 cut(s)	647
BstBAI	YACGTR	1 cut(s)	1675
BstC8I	GCNNGC	5 cut(s)	266, 290, 445, 546, 1034
BstDEI	CTNAG	7 cut(s)	269, 461, 1074, 1107, 1280, 1491, 1796
BstEII	GGTNACC	1 cut(s)	1361
BstENI	CCTNNNNNAGG	2 cut(s)	47, 308
BstF5I	GGATG	4 cut(s)	66, 895, 1486, 1819
BstFNI	CGCG	6 cut(s)	77, 197, 236, 264, 266, 1459
BstH2I	RGCGCY	2 cut(s)	220, 420
BstHHI	GCGC	7 cut(s)	131, 219, 266, 268, 419, 820, 1459
BstKTI	GATC	7 cut(s)	82, 176, 375, 1289, 1333, 1372, 1615
BstMAI	GTCTC	3 cut(s)	544, 867, 1157
BstMBI	GATC	7 cut(s)	79, 173, 372, 1286, 1330, 1369, 1612
BstMCI	CGRYCG	5 cut(s)	154, 240, 375, 562, 1289
BstNI	CCWGG	6 cut(s)	137, 257, 311, 686, 1426, 1812
BstPI	GGTNACC	1 cut(s)	1361
BstSCI	CCNGG	9 cut(s)	135, 255, 309, 507, 684, 1365, 1424, 1433, 1810
BstSFI	CTRYAG	1 cut(s)	1254
BstUI	CGCG	6 cut(s)	77, 197, 236, 264, 266, 1459
BstV1I	GCAGC	6 cut(s)	591, 637, 1231, 1240, 1300, 1483
BstV2I	GAAGAC	1 cut(s)	621
BstX2I	RGATCY	1 cut(s)	1369
BstXI	CCANNNNNNTGG	2 cut(s)	496, 1507
BstYI	RGATCY	1 cut(s)	1369
BstZI	CGGCCG	1 cut(s)	237
Bsu36I	CCTNAGG	1 cut(s)	1074
BsuI	GTATCC	1 cut(s)	871
BsuRI	GGCC	8 cut(s)	5, 98, 107, 140, 239, 791, 853, 1187
BtgZI	GCGATG	4 cut(s)	172, 217, 424, 466
BtrI	CACGTC	1 cut(s)	244
BtsCI	GGATG	4 cut(s)	66, 895, 1486, 1819
BtsI	GCAGTG	2 cut(s)	1263, 1639
BtsIMutI	CAGTG	2 cut(s)	1263, 1639
Cac8I	GCNNGC	5 cut(s)	266, 290, 445, 546, 1034
CfoI	GCGC	7 cut(s)	131, 219, 266, 268, 419, 820, 1459
Cfr10I	RCCGGY	1 cut(s)	1381
CseI	GACGC	4 cut(s)	186, 237, 289, 607
Csp6I	GTAC	2 cut(s)	826, 1716
CviAII	CATG	2 cut(s)	382, 1840
CviQI	GTAC	2 cut(s)	826, 1716
DdeI	CTNAG	7 cut(s)	269, 461, 1074, 1107, 1280, 1491, 1796
DinI	GGCGCC	1 cut(s)	418
DpnI	GATC	7 cut(s)	81, 175, 374, 1288, 1332, 1371, 1614
DpnII	GATC	7 cut(s)	79, 173, 372, 1286, 1330, 1369, 1612
EaeI	YGGCCR	4 cut(s)	3, 237, 789, 1185
EagI	CGGCCG	1 cut(s)	237
Eam1104I	CTCTTC	1 cut(s)	1350
EarI	CTCTTC	1 cut(s)	1350
EciI	GGCGGA	5 cut(s)	166, 296, 650, 785, 815
Ecl136II	GAGCTC	2 cut(s)	1733, 1817
EclXI	CGGCCG	1 cut(s)	237
Eco24I	GRGCYC	3 cut(s)	1073, 1735, 1819
Eco47I	GGWCC	8 cut(s)	85, 259, 474, 511, 682, 987, 1445, 1617
Eco52I	CGGCCG	1 cut(s)	237
Eco53kI	GAGCTC	2 cut(s)	1733, 1817
Eco81I	CCTNAGG	1 cut(s)	1074
Eco88I	CYCGRG	3 cut(s)	122, 362, 1721
Eco91I	GGTNACC	1 cut(s)	1361
EcoICRI	GAGCTC	2 cut(s)	1733, 1817
EcoNI	CCTNNNNNAGG	2 cut(s)	47, 308
EcoO109I	RGGNCCY	2 cut(s)	85, 987
EcoO65I	GGTNACC	1 cut(s)	1361
EcoRI	GAATTC	1 cut(s)	967
EcoRII	CCWGG	6 cut(s)	135, 255, 309, 684, 1424, 1810
EcoT38I	GRGCYC	3 cut(s)	1073, 1735, 1819
EgeI	GGCGCC	1 cut(s)	418
EheI	GGCGCC	1 cut(s)	418
Esp3I	CGTCTC	1 cut(s)	544
FaeI	CATG	2 cut(s)	385, 1843
FaiI	YATR	9 cut(s)	383, 672, 875, 1041, 1340, 1657, 1787, 1841, 1846
FaqI	GGGAC	3 cut(s)	184, 524, 566
FatI	CATG	2 cut(s)	381, 1839
FauI	CCCGC	1 cut(s)	1025
FblI	GTMKAC	1 cut(s)	150
FokI	GGATG	4 cut(s)	53, 902, 1493, 1806
FriOI	GRGCYC	3 cut(s)	1073, 1735, 1819
FspBI	CTAG	2 cut(s)	849, 1646
FspI	TGCGCA	1 cut(s)	819
GlaI	GCGC	7 cut(s)	130, 218, 265, 267, 418, 819, 1458
GsaI	CCCAGC	3 cut(s)	469, 921, 1466
GsuI	CTGGAG	2 cut(s)	1293, 1833
HaeII	RGCGCY	2 cut(s)	220, 420
HaeIII	GGCC	8 cut(s)	5, 98, 107, 140, 239, 791, 853, 1187
HapII	CCGG	5 cut(s)	508, 562, 1367, 1382, 1435
HgaI	GACGC	4 cut(s)	186, 237, 289, 607
HhaI	GCGC	7 cut(s)	131, 219, 266, 268, 419, 820, 1459
Hin1I	GRCGYC	3 cut(s)	300, 417, 599
Hin1II	CATG	2 cut(s)	385, 1843
Hin6I	GCGC	7 cut(s)	129, 217, 264, 266, 417, 818, 1457
HinP1I	GCGC	7 cut(s)	129, 217, 264, 266, 417, 818, 1457
HincII	GTYRAC	3 cut(s)	151, 583, 1198
HindII	GTYRAC	3 cut(s)	151, 583, 1198
HindIII	AAGCTT	1 cut(s)	611
HinfI	GANTC	8 cut(s)	110, 365, 407, 457, 721, 749, 1000, 1265
HpaII	CCGG	5 cut(s)	508, 562, 1367, 1382, 1435
HphI	GGTGA	2 cut(s)	316, 790
Hpy166II	GTNNAC	3 cut(s)	151, 583, 1198
Hpy188III	TCNNGA	6 cut(s)	887, 1274, 1352, 1694, 1721, 1757
Hpy8I	GTNNAC	3 cut(s)	151, 583, 1198
Hpy99I	CGWCG	3 cut(s)	231, 245, 373
HpyAV	CCTTC	3 cut(s)	1593, 1597, 1759
HpyCH4III	ACNGT	3 cut(s)	703, 883, 1240
HpyCH4IV	ACGT	2 cut(s)	243, 1674
HpyCH4V	TGCA	8 cut(s)	288, 1219, 1256, 1316, 1375, 1505, 1639, 1672
HpyF3I	CTNAG	7 cut(s)	269, 461, 1074, 1107, 1280, 1491, 1796
HpySE526I	ACGT	2 cut(s)	243, 1674
Hsp92I	GRCGYC	3 cut(s)	300, 417, 599
Hsp92II	CATG	2 cut(s)	385, 1843
HspAI	GCGC	7 cut(s)	129, 217, 264, 266, 417, 818, 1457
KasI	GGCGCC	1 cut(s)	416
Kzo9I	GATC	7 cut(s)	79, 173, 372, 1286, 1330, 1369, 1612
LmnI	GCTCC	7 cut(s)	52, 174, 396, 510, 802, 1730, 1814
Lsp1109I	GCAGC	6 cut(s)	591, 637, 1231, 1240, 1300, 1483
LweI	GCATC	3 cut(s)	156, 195, 240
MaeI	CTAG	2 cut(s)	849, 1646
MaeII	ACGT	2 cut(s)	243, 1674
MaeIII	GTNAC	6 cut(s)	595, 844, 1156, 1361, 1401, 1658
MalI	GATC	7 cut(s)	81, 175, 374, 1288, 1332, 1371, 1614
MboI	GATC	7 cut(s)	79, 173, 372, 1286, 1330, 1369, 1612
MboII	GAAGA	4 cut(s)	262, 583, 621, 1367
MfeI	CAATTG	1 cut(s)	1395
MflI	RGATCY	1 cut(s)	1369
MhlI	GDGCHC	3 cut(s)	1073, 1735, 1819
MlsI	TGGCCA	1 cut(s)	1187
MluCI	AATT	6 cut(s)	576, 967, 1214, 1225, 1395, 1563
MluNI	TGGCCA	1 cut(s)	1187
Mly113I	GGCGCC	1 cut(s)	417
MlyI	GAGTC	5 cut(s)	119, 374, 416, 1009, 1274
MmeI	TCCRAC	2 cut(s)	250, 390
Mox20I	TGGCCA	1 cut(s)	1187
MscI	TGGCCA	1 cut(s)	1187
MseI	TTAA	3 cut(s)	939, 1224, 1296
MslI	CAYNNNNRTG	2 cut(s)	494, 1014
Msp20I	TGGCCA	1 cut(s)	1187
MspA1I	CMGCKG	3 cut(s)	297, 604, 1313
MspI	CCGG	5 cut(s)	508, 562, 1367, 1382, 1435
MspR9I	CCNGG	9 cut(s)	137, 257, 311, 509, 686, 1367, 1426, 1435, 1812
MunI	CAATTG	1 cut(s)	1395
Mva1269I	GAATGC	3 cut(s)	664, 921, 1549
MvaI	CCWGG	6 cut(s)	137, 257, 311, 686, 1426, 1812
MvnI	CGCG	6 cut(s)	77, 197, 236, 264, 266, 1459
NarI	GGCGCC	1 cut(s)	417
NciI	CCSGG	3 cut(s)	509, 1367, 1435
NdeII	GATC	7 cut(s)	79, 173, 372, 1286, 1330, 1369, 1612
NlaIII	CATG	2 cut(s)	385, 1843
NlaIV	GGNNCC	6 cut(s)	86, 392, 418, 512, 988, 1581
NmeAIII	GCCGAG	1 cut(s)	133
NmuCI	GTSAC	3 cut(s)	595, 844, 1401
NsbI	TGCGCA	1 cut(s)	819
PaeR7I	CTCGAG	2 cut(s)	362, 1721
PauI	GCGCGC	1 cut(s)	264
PcsI	WCGNNNNNNNCGW	4 cut(s)	219, 240, 447, 1671
PctI	GAATGC	3 cut(s)	664, 921, 1549
PfeI	GAWTC	3 cut(s)	457, 721, 749
PfoI	TCCNGGA	1 cut(s)	507
Ple19I	CGATCG	2 cut(s)	375, 1289
PleI	GAGTC	5 cut(s)	118, 373, 415, 1008, 1273
PluTI	GGCGCC	1 cut(s)	420
PpsI	GAGTC	5 cut(s)	118, 373, 415, 1008, 1273
Ppu21I	YACGTR	1 cut(s)	1675
PpuMI	RGGWCCY	2 cut(s)	85, 987
PshBI	ATTAAT	1 cut(s)	939
Psp124BI	GAGCTC	2 cut(s)	1735, 1819
Psp5II	RGGWCCY	2 cut(s)	85, 987
Psp6I	CCWGG	6 cut(s)	135, 255, 309, 684, 1424, 1810
PspEI	GGTNACC	1 cut(s)	1361
PspFI	CCCAGC	3 cut(s)	465, 917, 1462
PspGI	CCWGG	6 cut(s)	135, 255, 309, 684, 1424, 1810
PspN4I	GGNNCC	6 cut(s)	86, 392, 418, 512, 988, 1581
PspPPI	RGGWCCY	2 cut(s)	85, 987
PspXI	VCTCGAGB	1 cut(s)	362
PstI	CTGCAG	1 cut(s)	1258
PsuI	RGATCY	1 cut(s)	1369
PteI	GCGCGC	1 cut(s)	264
PvuI	CGATCG	2 cut(s)	375, 1289
PvuII	CAGCTG	1 cut(s)	1313
RsaI	GTAC	2 cut(s)	827, 1717
RsaNI	GTAC	2 cut(s)	826, 1716
RseI	CAYNNNNRTG	2 cut(s)	494, 1014
SacI	GAGCTC	2 cut(s)	1735, 1819
SalI	GTCGAC	1 cut(s)	149
SaqAI	TTAA	3 cut(s)	939, 1224, 1296
Sau3AI	GATC	7 cut(s)	79, 173, 372, 1286, 1330, 1369, 1612
ScaI	AGTACT	2 cut(s)	827, 1717
SchI	GAGTC	5 cut(s)	119, 374, 416, 1009, 1274
ScrFI	CCNGG	9 cut(s)	137, 257, 311, 509, 686, 1367, 1426, 1435, 1812
SduI	GDGCHC	3 cut(s)	1073, 1735, 1819
SfaNI	GCATC	3 cut(s)	156, 195, 240
SfcI	CTRYAG	1 cut(s)	1254
SfiI	GGCCNNNNNGGCC	1 cut(s)	104
SfoI	GGCGCC	1 cut(s)	418
Sfr274I	CTCGAG	2 cut(s)	362, 1721
SinI	GGWCC	8 cut(s)	85, 259, 474, 511, 682, 987, 1445, 1617
SlaI	CTCGAG	2 cut(s)	362, 1721
SmiMI	CAYNNNNRTG	2 cut(s)	494, 1014
SmlI	CTYRAG	5 cut(s)	89, 362, 608, 1091, 1721
SmoI	CTYRAG	5 cut(s)	89, 362, 608, 1091, 1721
Sse9I	AATT	6 cut(s)	576, 967, 1214, 1225, 1395, 1563
SspDI	GGCGCC	1 cut(s)	416
SspMI	CTAG	2 cut(s)	849, 1646
SstI	GAGCTC	2 cut(s)	1735, 1819
StyD4I	CCNGG	9 cut(s)	135, 255, 309, 507, 684, 1365, 1424, 1433, 1810
TaaI	ACNGT	3 cut(s)	703, 883, 1240
TaiI	ACGT	2 cut(s)	246, 1677
TaqII	GACCGA	1 cut(s)	528
TasI	AATT	6 cut(s)	576, 967, 1214, 1225, 1395, 1563
TatI	WGTACW	2 cut(s)	825, 1715
TfiI	GAWTC	3 cut(s)	457, 721, 749
Tru1I	TTAA	3 cut(s)	939, 1224, 1296
Tru9I	TTAA	3 cut(s)	939, 1224, 1296
TscAI	CASTG	2 cut(s)	1263, 1646
TseFI	GTSAC	3 cut(s)	595, 844, 1401
TseI	GCWGC	6 cut(s)	604, 650, 1219, 1253, 1313, 1496
Tsp45I	GTSAC	3 cut(s)	595, 844, 1401
TspDTI	ATGAA	4 cut(s)	398, 659, 914, 1828
TspGWI	ACGGA	1 cut(s)	695
TspRI	CASTG	2 cut(s)	1263, 1646
VpaK11BI	GGWCC	8 cut(s)	85, 259, 474, 511, 682, 987, 1445, 1617
VspI	ATTAAT	1 cut(s)	939
XagI	CCTNNNNNAGG	2 cut(s)	47, 308
XapI	RAATTY	1 cut(s)	967
XcmI	CCANNNNNNNNNTGG	1 cut(s)	493
XhoI	CTCGAG	2 cut(s)	362, 1721
XmiI	GTMKAC	1 cut(s)	150
XspI	CTAG	2 cut(s)	849, 1646
ZrmI	AGTACT	2 cut(s)	827, 1717

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.