MD16G1102800.v1.1

Armadillo repeat only

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0001438
Physical Location & Seq
Forward (+)
7196599 .. 7198467
1869 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1102800.v1.1.491

Sequence Viewer

Length: 1869 bp
ATGGCTTCGGAGGAGAGGCGAATCGAGGACGAATTGTCGTACCCGATTCTGCTGTCGGAGCGGGTTCGGACCGCCGTCGACGAGGCAAAGTCGTTCAAGCTGGAGTGCTCAGAGGTCGGGAAGCAGGTGGATCGCCTCTCGCAAAATCTCCGAACCGTGGTCCGGTTCGCGACGTCGGCGCCGGTTCTGTACGAGCGTCCGATTCGGTGCATTGTCGCCGAGGTGTCGAAGAATTTGGAGCGGGTCCTAACCCTGGTGCGCAAGTGCAAGCGCCGGAGCGTCCTACGACGTGTCGTTACGATCACGAGGGCCACCGACTTCCGGAAGCTCTTCAACTTCCTCGAGTCCTCCGTCGGCGACATGAAGTGGCTGCTGAGCATACTCGACCCGGACACCGCGGGCAACAACGGAATTGAACTCTCCCTGGCCCCGATTGCCAGCAACGACCCGATTCTCTCGTGGGTCTGGTCATTCATCGCCACCGTCCAAATGGGTCAGCTGCCGTATCGTATCGAGGCCGCCAACGAGCTCGCCTCGCTGGCGGATGACAACGACAGGAACAAGAAGATTATCGTCGACGAAGGCGGAGTCTCGCCGCTGCTGAAACTGTTGAAAGAGGGCTCGTCGCCGGATGCCCAAATTGCGGCGGCTACGGCGCTGTATAATCTGGCTTGTGATCAGGAGAAGGTGAGCACTATTGTGAATGAGGTTGGGGTGCCCATTATTGTGCAGGTTCTGGGCGACTCACCGATGAGGGTTCAGAGCCGGGTGGCGACCCTGGTGGCGCGAATGGCAGAGTACGACAGCATTGCCCAGGAGGATTTTGCCAGAGAGAATGTGATCAGGCCGCTGGTGACGCTGCTGTCGTTCGAGATGTTCGGGGAGGACCAGAATAATCATCAATTGGGTAAGCAAAGCATTCACTCTCTGATTCAGATTAGTAAGGAAATGGAGAAGAGCACATTAGCAAAACCGAAACGGAGTAGCAGTAGCAGTAGTCGTGACTGTAATTATTCAAATACGTATTCAAGTTCTTCGTATTCTTATTATTCGGAGGGTAGTAGTCGAGGCGGGCATTATAGGAAGGAGAGGGAGAATGAGAAACCTCATGTAAAGCTTCAGCTGAAAGTTAGCTGTGCCGCCGCGTTGTGGATGCTTGCTAGAGGCAGTGTTTTGAATAGTAGGAGGATAACTGAGACCAAAGGTCTGCTTTGTTTGGCCAAGTTGGTGGAGAAGGAGCAGGGCGAGTTGCAATACAATTGTTTGATGACTATAATGGAGATATCAGCCGCAGCTGAATCCAATGCTGACCTTAGACGAGCTGCATTCAAGACCAATTCGCCGGCTGCCAAGGCGGTTGTGGATCAGCTCTTGAGACTGATCAAAGAGGTGGATAGCCCAACATTGCAAATACCTGCCATTAAATCGATTGGTTCGTTGGCCAGGACATTCCCTGCTCGAGAGACGTGGGTCATTGGTCCGCTAGTGACTCAACTTAGTCACAAAGATCTAGACATGGCTACGGAAGCAGCAATTTCACTTGGCAAGTTTGCTTGTCCGGATAATTTTCTCTGTATGGAGCATTCGAAGACAATAATTGAGTTCAATGCTATTCTGCCTCTGATGAAACTGCTAAGGGGCAACGAGCACTCGCAGCTACACGGATTGGTTTTCCTTTGCTACCTTGCATTACACTCTGGCAATACCAACTCTTTGGAACCGACTAGGGTGTTGACTGCCCTTGAAGGGGCCGACCGCAGTGCACTCCCCCAACATCCCGAGTTGAGAGAGTTGGTGTCCAAGGCGATATATCACCTCAATCTGTACCACACTGGAGGTCACTCGCAAAGGTTGACATTTGTGCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm

Protein Analysis

623

Amino Acids

69.18

Weight (kDa)

8.35

Isoelectric Point (pI)

44.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7792 PF25055 9 - 128 1.5e-50 Domain of unknown function (DUF7792)
Arm PF00514 184 - 224 6e-08 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 115
AasI GACNNNNNNGTC 1 cut(s) 862
AatII GACGTC 1 cut(s) 176
Acc16I TGCGCA 1 cut(s) 260
Acc36I ACCTGC 3 cut(s) 115, 721, 1423
AccB1I GGYRCC 2 cut(s) 178, 715
AccBSI CCGCTC 2 cut(s) 61, 241
AccI GTMKAC 2 cut(s) 78, 576
AccII CGCG 4 cut(s) 170, 398, 787, 1145
AccIII TCCGGA 2 cut(s) 321, 1558
AclWI GGATC 2 cut(s) 138, 1371
AcoI YGGCCR 2 cut(s) 1218, 1440
AcsI RAATTY 1 cut(s) 232
AcuI CTGAAG 1 cut(s) 1103
AcyI GRCGYC 2 cut(s) 173, 179
AfaI GTAC 4 cut(s) 41, 191, 800, 1826
AfiI CCNNNNNNNGG 8 cut(s) 157, 162, 253, 321, 643, 1149, 1746, 1747
AflIII ACRYGT 1 cut(s) 289
AhdI GACNNNNNGTC 2 cut(s) 34, 1203
AjiI CACGTC 2 cut(s) 290, 1467
AjnI CCWGG 5 cut(s) 252, 423, 777, 813, 1442
AleI CACNNNNGTG 1 cut(s) 698
Alw21I GWGCWC 6 cut(s) 110, 531, 695, 962, 1650, 1765
Alw26I GTCTC 4 cut(s) 595, 1190, 1369, 1457
Alw44I GTGCAC 1 cut(s) 1761
AlwI GGATC 2 cut(s) 138, 1371
AlwNI CAGNNNCTG 1 cut(s) 736
Ama87I CYCGRG 3 cut(s) 341, 1458, 1778
Aor13HI TCCGGA 2 cut(s) 321, 1558
AoxI GGCC 7 cut(s) 309, 426, 516, 845, 1218, 1440, 1749
ApaLI GTGCAC 1 cut(s) 1761
ApeKI GCWGC 9 cut(s) 370, 499, 598, 859, 1292, 1322, 1346, 1529, 1654
ApoI RAATTY 1 cut(s) 232
ArsI GACNNNNNNTTYG 2 cut(s) 573, 605
Asp700I GAANNNNTTC 1 cut(s) 329
AspLEI GCGC 5 cut(s) 181, 261, 273, 658, 787
AspS9I GGNCC 8 cut(s) 69, 160, 244, 309, 427, 886, 1478, 1749
AsuC2I CCSGG 2 cut(s) 389, 767
AsuHPI GGTGA 4 cut(s) 700, 738, 865, 1805
AsuII TTCGAA 1 cut(s) 1586
AvaI CYCGRG 3 cut(s) 341, 1458, 1778
AvaII GGWCC 5 cut(s) 69, 160, 244, 886, 1478
BaeGI GKGCMC 2 cut(s) 720, 1765
BalI TGGCCA 2 cut(s) 1220, 1442
BanI GGYRCC 2 cut(s) 178, 715
BanII GRGCYC 2 cut(s) 531, 623
BauI CACGAG 2 cut(s) 304, 457
BbsI GAAGAC 1 cut(s) 1595
Bbv12I GWGCWC 6 cut(s) 110, 531, 695, 962, 1650, 1765
BbvI GCAGC 9 cut(s) 357, 486, 585, 846, 1304, 1309, 1333, 1541, 1666
BceAI ACGGC 4 cut(s) 59, 487, 669, 1849
BcgI CGANNNNNNTGC 6 cut(s) 113, 147, 791, 825, 1742, 1776
BciT130I CCWGG 5 cut(s) 254, 425, 779, 815, 1444
BclI TGATCA 3 cut(s) 676, 840, 1380
BcnI CCSGG 2 cut(s) 389, 767
BcoDI GTCTC 4 cut(s) 595, 1190, 1369, 1457
BfaI CTAG 4 cut(s) 1161, 1484, 1511, 1725
BfoI RGCGCY 3 cut(s) 182, 274, 659
BfuAI ACCTGC 3 cut(s) 115, 721, 1423
BglI GCCNNNNNGGC 1 cut(s) 539
BglII AGATCT 1 cut(s) 1507
BlpI GCTNAGC 1 cut(s) 374
Bme1390I CCNGG 7 cut(s) 254, 389, 425, 767, 779, 815, 1444
Bme18I GGWCC 5 cut(s) 69, 160, 244, 886, 1478
BmeRI GACNNNNNGTC 2 cut(s) 34, 1203
BmeT110I CYCGRG 3 cut(s) 341, 1458, 1778
BmgBI CACGTC 2 cut(s) 290, 1467
BmgT120I GGNCC 8 cut(s) 69, 160, 244, 309, 427, 886, 1478, 1749
BmiI GGNNCC 6 cut(s) 180, 245, 429, 717, 1719, 1750
BmrFI CCNGG 7 cut(s) 254, 389, 425, 767, 779, 815, 1444
BmsI GCATC 2 cut(s) 622, 1143
BoxI GACNNNNGTC 2 cut(s) 74, 1469
BpiI GAAGAC 1 cut(s) 1595
BplI GAGNNNNNCTC 2 cut(s) 518, 550
BpmI CTGGAG 2 cut(s) 122, 1854
Bpu10I CCTNAGC 1 cut(s) 1634
Bpu1102I GCTNAGC 1 cut(s) 374
Bpu14I TTCGAA 1 cut(s) 1586
BpuEI CTTGAG 1 cut(s) 1393
BpuMI CCSGG 2 cut(s) 389, 767
Bsa29I ATCGAT 1 cut(s) 1427
BsaAI YACGTR 1 cut(s) 1023
BsaHI GRCGYC 2 cut(s) 173, 179
BsaI GGTCTC 1 cut(s) 1190
BsaJI CCNNGG 9 cut(s) 156, 219, 252, 396, 423, 777, 813, 1350, 1800
BsaWI WCCGGW 3 cut(s) 162, 321, 1558
BsaXI ACNNNNNCTCC 2 cut(s) 973, 1003
Bsc4I CCNNNNNNNGG 8 cut(s) 157, 162, 253, 321, 643, 1149, 1746, 1747
Bse118I RCCGGY 2 cut(s) 181, 1342
Bse1I ACTGG 1 cut(s) 1837
Bse3DI GCAATG 2 cut(s) 807, 1403
BseAI TCCGGA 2 cut(s) 321, 1558
BseBI CCWGG 5 cut(s) 254, 425, 779, 815, 1444
BseCI ATCGAT 1 cut(s) 1427
BseDI CCNNGG 9 cut(s) 156, 219, 252, 396, 423, 777, 813, 1350, 1800
BseGI GGATG 4 cut(s) 550, 637, 1158, 1774
BseLI CCNNNNNNNGG 8 cut(s) 157, 162, 253, 321, 643, 1149, 1746, 1747
BseMI GCAATG 2 cut(s) 807, 1403
BseMII CTCAG 3 cut(s) 123, 365, 1185
BseNI ACTGG 1 cut(s) 1837
BseRI GAGGAG 1 cut(s) 26
BseSI GKGCMC 2 cut(s) 720, 1765
BseXI GCAGC 9 cut(s) 357, 486, 585, 846, 1304, 1309, 1333, 1541, 1666
BsgI GTGCAG 1 cut(s) 749
Bsh1236I CGCG 4 cut(s) 170, 398, 787, 1145
Bsh1285I CGRYCG 1 cut(s) 1756
BshFI GGCC 7 cut(s) 311, 428, 518, 847, 1220, 1442, 1751
BshNI GGYRCC 2 cut(s) 178, 715
BshVI ATCGAT 1 cut(s) 1427
BsiEI CGRYCG 1 cut(s) 1756
BsiHKAI GWGCWC 6 cut(s) 110, 531, 695, 962, 1650, 1765
BsiHKCI CYCGRG 3 cut(s) 341, 1458, 1778
BsiSI CCGG 9 cut(s) 163, 182, 274, 322, 389, 629, 766, 1343, 1559
BslI CCNNNNNNNGG 8 cut(s) 157, 162, 253, 321, 643, 1149, 1746, 1747
BsmAI GTCTC 4 cut(s) 595, 1190, 1369, 1457
BsmBI CGTCTC 1 cut(s) 1457
BsmI GAATGC 3 cut(s) 918, 1325, 1582
BsnI GGCC 7 cut(s) 311, 428, 518, 847, 1220, 1442, 1751
Bso31I GGTCTC 1 cut(s) 1190
BsoBI CYCGRG 3 cut(s) 341, 1458, 1778
Bsp119I TTCGAA 1 cut(s) 1586
Bsp1286I GDGCHC 8 cut(s) 110, 531, 623, 695, 720, 962, 1650, 1765
Bsp13I TCCGGA 2 cut(s) 321, 1558
Bsp143I GATC 7 cut(s) 130, 300, 676, 840, 1363, 1380, 1507
Bsp1720I GCTNAGC 1 cut(s) 374
Bsp68I TCGCGA 1 cut(s) 170
BspANI GGCC 7 cut(s) 311, 428, 518, 847, 1220, 1442, 1751
BspCNI CTCAG 3 cut(s) 122, 366, 1186
BspDI ATCGAT 1 cut(s) 1427
BspEI TCCGGA 2 cut(s) 321, 1558
BspFNI CGCG 4 cut(s) 170, 398, 787, 1145
BspLI GGNNCC 6 cut(s) 180, 245, 429, 717, 1719, 1750
BspMI ACCTGC 3 cut(s) 115, 721, 1423
BspPI GGATC 2 cut(s) 138, 1371
BspQI GCTCTTC 2 cut(s) 335, 950
BspT104I TTCGAA 1 cut(s) 1586
BspT107I GGYRCC 2 cut(s) 178, 715
BspTNI GGTCTC 1 cut(s) 1190
BsrBI CCGCTC 2 cut(s) 61, 241
BsrDI GCAATG 2 cut(s) 807, 1403
BsrFI RCCGGY 2 cut(s) 181, 1342
BsrI ACTGG 1 cut(s) 1837
BssAI RCCGGY 2 cut(s) 181, 1342
BssECI CCNNGG 9 cut(s) 156, 219, 252, 396, 423, 777, 813, 1350, 1800
BssMI GATC 7 cut(s) 130, 300, 676, 840, 1363, 1380, 1507
BssNI GRCGYC 2 cut(s) 173, 179
BssSI CACGAG 2 cut(s) 304, 457
BssT1I CCWWGG 2 cut(s) 1350, 1800
Bst2BI CACGAG 2 cut(s) 304, 457
Bst2UI CCWGG 5 cut(s) 254, 425, 779, 815, 1444
Bst4CI ACNGT 4 cut(s) 157, 484, 609, 1007
Bst6I CTCTTC 2 cut(s) 335, 950
BstACI GRCGYC 2 cut(s) 173, 179
BstBAI YACGTR 1 cut(s) 1023
BstBI TTCGAA 1 cut(s) 1586
BstC8I GCNNGC 8 cut(s) 269, 400, 439, 531, 540, 1073, 1158, 1344
BstDEI CTNAG 6 cut(s) 109, 374, 1194, 1313, 1496, 1634
BstDSI CCRYGG 2 cut(s) 156, 396
BstF5I GGATG 4 cut(s) 550, 637, 1158, 1774
BstFNI CGCG 4 cut(s) 170, 398, 787, 1145
BstH2I RGCGCY 3 cut(s) 182, 274, 659
BstHHI GCGC 5 cut(s) 181, 261, 273, 658, 787
BstKTI GATC 7 cut(s) 133, 303, 679, 843, 1366, 1383, 1510
BstMAI GTCTC 4 cut(s) 595, 1190, 1369, 1457
BstMBI GATC 7 cut(s) 130, 300, 676, 840, 1363, 1380, 1507
BstMCI CGRYCG 1 cut(s) 1756
BstNI CCWGG 5 cut(s) 254, 425, 779, 815, 1444
BstPAI GACNNNNGTC 2 cut(s) 74, 1469
BstSCI CCNGG 7 cut(s) 252, 387, 423, 765, 777, 813, 1442
BstSLI GKGCMC 2 cut(s) 720, 1765
BstSNI TACGTA 1 cut(s) 1023
BstUI CGCG 4 cut(s) 170, 398, 787, 1145
BstV1I GCAGC 9 cut(s) 357, 486, 585, 846, 1304, 1309, 1333, 1541, 1666
BstV2I GAAGAC 1 cut(s) 1595
BstX2I RGATCY 1 cut(s) 1507
BstXI CCANNNNNNTGG 2 cut(s) 1228, 1714
BstYI RGATCY 1 cut(s) 1507
Bsu15I ATCGAT 1 cut(s) 1427
BsuRI GGCC 7 cut(s) 311, 428, 518, 847, 1220, 1442, 1751
BsuTUI ATCGAT 1 cut(s) 1427
BtgI CCRYGG 2 cut(s) 156, 396
BtgZI GCGATG 1 cut(s) 460
BtrI CACGTC 2 cut(s) 290, 1467
BtsCI GGATG 4 cut(s) 550, 637, 1158, 1774
BtsI GCAGTG 2 cut(s) 1174, 1765
BtsIMutI CAGTG 3 cut(s) 1174, 1765, 1830
BtuMI TCGCGA 1 cut(s) 170
BveI ACCTGC 3 cut(s) 115, 721, 1423
Cac8I GCNNGC 8 cut(s) 269, 400, 439, 531, 540, 1073, 1158, 1344
CaiI CAGNNNCTG 1 cut(s) 736
CfoI GCGC 5 cut(s) 181, 261, 273, 658, 787
Cfr10I RCCGGY 2 cut(s) 181, 1342
Cfr13I GGNCC 8 cut(s) 69, 160, 244, 309, 427, 886, 1478, 1749
Cfr42I CCGCGG 1 cut(s) 399
ClaI ATCGAT 1 cut(s) 1427
CpoI CGGWCCG 1 cut(s) 69
CseI GACGC 3 cut(s) 185, 268, 865
Csp6I GTAC 4 cut(s) 40, 190, 799, 1825
CspI CGGWCCG 1 cut(s) 69
CviAII CATG 3 cut(s) 361, 1109, 1516
CviQI GTAC 4 cut(s) 40, 190, 799, 1825
DdeI CTNAG 6 cut(s) 109, 374, 1194, 1313, 1496, 1634
DinI GGCGCC 1 cut(s) 180
DpnI GATC 7 cut(s) 132, 302, 678, 842, 1365, 1382, 1509
DpnII GATC 7 cut(s) 130, 300, 676, 840, 1363, 1380, 1507
DrdI GACNNNNNNGTC 1 cut(s) 862
DriI GACNNNNNGTC 2 cut(s) 34, 1203
DseDI GACNNNNNNGTC 1 cut(s) 862
EaeI YGGCCR 2 cut(s) 1218, 1440
Eam1104I CTCTTC 2 cut(s) 335, 950
Eam1105I GACNNNNNGTC 2 cut(s) 34, 1203
EarI CTCTTC 2 cut(s) 335, 950
EciI GGCGGA 2 cut(s) 557, 600
Ecl136II GAGCTC 1 cut(s) 529
Eco105I TACGTA 1 cut(s) 1023
Eco130I CCWWGG 2 cut(s) 1350, 1800
Eco24I GRGCYC 2 cut(s) 531, 623
Eco31I GGTCTC 1 cut(s) 1190
Eco32I GATATC 1 cut(s) 1284
Eco47I GGWCC 5 cut(s) 69, 160, 244, 886, 1478
Eco53kI GAGCTC 1 cut(s) 529
Eco57I CTGAAG 1 cut(s) 1103
Eco88I CYCGRG 3 cut(s) 341, 1458, 1778
EcoICRI GAGCTC 1 cut(s) 529
EcoO109I RGGNCCY 1 cut(s) 244
EcoRII CCWGG 5 cut(s) 252, 423, 777, 813, 1442
EcoRV GATATC 1 cut(s) 1284
EcoT14I CCWWGG 2 cut(s) 1350, 1800
EcoT38I GRGCYC 2 cut(s) 531, 623
EgeI GGCGCC 1 cut(s) 180
EheI GGCGCC 1 cut(s) 180
ErhI CCWWGG 2 cut(s) 1350, 1800
Esp3I CGTCTC 1 cut(s) 1457
FaeI CATG 3 cut(s) 364, 1112, 1519
FaiI YATR 9 cut(s) 362, 380, 663, 1080, 1110, 1274, 1517, 1577, 1810
FalI AAGNNNNNCTT 2 cut(s) 1194, 1226
FatI CATG 3 cut(s) 360, 1108, 1515
FauI CCCGC 4 cut(s) 54, 234, 391, 1064
FbaI TGATCA 3 cut(s) 676, 840, 1380
FblI GTMKAC 2 cut(s) 78, 576
FokI GGATG 4 cut(s) 557, 644, 1165, 1761
FriOI GRGCYC 2 cut(s) 531, 623
FspBI CTAG 4 cut(s) 1161, 1484, 1511, 1725
FspI TGCGCA 1 cut(s) 260
GlaI GCGC 5 cut(s) 180, 260, 272, 657, 786
GsuI CTGGAG 2 cut(s) 122, 1854
HaeII RGCGCY 3 cut(s) 182, 274, 659
HaeIII GGCC 7 cut(s) 311, 428, 518, 847, 1220, 1442, 1751
HapII CCGG 9 cut(s) 163, 182, 274, 322, 389, 629, 766, 1343, 1559
HgaI GACGC 3 cut(s) 185, 268, 865
HhaI GCGC 5 cut(s) 181, 261, 273, 658, 787
Hin1I GRCGYC 2 cut(s) 173, 179
Hin1II CATG 3 cut(s) 364, 1112, 1519
Hin6I GCGC 5 cut(s) 179, 259, 271, 656, 785
HinP1I GCGC 5 cut(s) 179, 259, 271, 656, 785
HincII GTYRAC 4 cut(s) 79, 577, 1734, 1854
HindII GTYRAC 4 cut(s) 79, 577, 1734, 1854
HindIII AAGCTT 1 cut(s) 1115
HpaII CCGG 9 cut(s) 163, 182, 274, 322, 389, 629, 766, 1343, 1559
HphI GGTGA 4 cut(s) 700, 738, 865, 1805
Hpy166II GTNNAC 5 cut(s) 79, 577, 1734, 1763, 1854
Hpy8I GTNNAC 5 cut(s) 79, 577, 1734, 1763, 1854
Hpy99I CGWCG 9 cut(s) 80, 83, 175, 178, 291, 356, 578, 581, 628
HpyAV CCTTC 5 cut(s) 575, 679, 1078, 1228, 1739
HpyCH4III ACNGT 4 cut(s) 157, 484, 609, 1007
HpyCH4IV ACGT 4 cut(s) 173, 289, 1022, 1466
HpyCH4V TGCA 8 cut(s) 210, 267, 730, 1252, 1325, 1408, 1688, 1763
HpyF3I CTNAG 6 cut(s) 109, 374, 1194, 1313, 1496, 1634
HpySE526I ACGT 4 cut(s) 173, 289, 1022, 1466
Hsp92I GRCGYC 2 cut(s) 173, 179
Hsp92II CATG 3 cut(s) 364, 1112, 1519
HspAI GCGC 5 cut(s) 179, 259, 271, 656, 785
KasI GGCGCC 1 cut(s) 178
Kpn2I TCCGGA 2 cut(s) 321, 1558
KroI GCCGGC 1 cut(s) 1342
KroNI GCCGGC 1 cut(s) 1344
Ksp22I TGATCA 3 cut(s) 676, 840, 1380
KspI CCGCGG 1 cut(s) 399
Kzo9I GATC 7 cut(s) 130, 300, 676, 840, 1363, 1380, 1507
LguI GCTCTTC 2 cut(s) 335, 950
LmnI GCTCC 5 cut(s) 58, 238, 276, 1237, 1579
Lsp1109I GCAGC 9 cut(s) 357, 486, 585, 846, 1304, 1309, 1333, 1541, 1666
LweI GCATC 2 cut(s) 622, 1143
MaeI CTAG 4 cut(s) 1161, 1484, 1511, 1725
MaeII ACGT 4 cut(s) 173, 289, 1022, 1466
MaeIII GTNAC 6 cut(s) 295, 853, 1001, 1486, 1499, 1838
MalI GATC 7 cut(s) 132, 302, 678, 842, 1365, 1382, 1509
MbiI CCGCTC 2 cut(s) 61, 241
MboI GATC 7 cut(s) 130, 300, 676, 840, 1363, 1380, 1507
MboII GAAGA 6 cut(s) 241, 322, 577, 967, 1026, 1600
MfeI CAATTG 2 cut(s) 902, 1258
MflI RGATCY 1 cut(s) 1507
MhlI GDGCHC 8 cut(s) 110, 531, 623, 695, 720, 962, 1650, 1765
MlsI TGGCCA 2 cut(s) 1220, 1442
MluNI TGGCCA 2 cut(s) 1220, 1442
Mly113I GGCGCC 1 cut(s) 179
MlyI GAGTC 4 cut(s) 353, 597, 737, 1483
MmeI TCCRAC 1 cut(s) 36
Mox20I TGGCCA 2 cut(s) 1220, 1442
MroI TCCGGA 2 cut(s) 321, 1558
MroNI GCCGGC 1 cut(s) 1342
MroXI GAANNNNTTC 1 cut(s) 329
MscI TGGCCA 2 cut(s) 1220, 1442
MseI TTAA 1 cut(s) 1422
MslI CAYNNNNRTG 2 cut(s) 698, 725
Msp20I TGGCCA 2 cut(s) 1220, 1442
MspA1I CMGCKG 6 cut(s) 398, 499, 598, 850, 1123, 1295
MspI CCGG 9 cut(s) 163, 182, 274, 322, 389, 629, 766, 1343, 1559
MspR9I CCNGG 7 cut(s) 254, 389, 425, 767, 779, 815, 1444
MunI CAATTG 2 cut(s) 902, 1258
Mva1269I GAATGC 3 cut(s) 918, 1325, 1582
MvaI CCWGG 5 cut(s) 254, 425, 779, 815, 1444
MvnI CGCG 4 cut(s) 170, 398, 787, 1145
NaeI GCCGGC 1 cut(s) 1344
NarI GGCGCC 1 cut(s) 179
NciI CCSGG 2 cut(s) 389, 767
NdeII GATC 7 cut(s) 130, 300, 676, 840, 1363, 1380, 1507
NgoMIV GCCGGC 1 cut(s) 1342
NlaIII CATG 3 cut(s) 364, 1112, 1519
NlaIV GGNNCC 6 cut(s) 180, 245, 429, 717, 1719, 1750
NmeAIII GCCGAG 1 cut(s) 244
NmuCI GTSAC 5 cut(s) 853, 1001, 1486, 1499, 1838
NruI TCGCGA 1 cut(s) 170
NsbI TGCGCA 1 cut(s) 260
NspV TTCGAA 1 cut(s) 1586
OliI CACNNNNGTG 1 cut(s) 698
PaeR7I CTCGAG 2 cut(s) 341, 1458
PaqCI CACCTGC 1 cut(s) 115
PciSI GCTCTTC 2 cut(s) 335, 950
PcsI WCGNNNNNNNCGW 3 cut(s) 348, 863, 1433
PctI GAATGC 3 cut(s) 918, 1325, 1582
PdiI GCCGGC 1 cut(s) 1344
PdmI GAANNNNTTC 1 cut(s) 329
PfeI GAWTC 6 cut(s) 21, 46, 202, 451, 931, 1298
PleI GAGTC 4 cut(s) 352, 596, 737, 1483
PluTI GGCGCC 1 cut(s) 182
PpsI GAGTC 4 cut(s) 352, 596, 737, 1483
Ppu21I YACGTR 1 cut(s) 1023
PpuMI RGGWCCY 1 cut(s) 244
PshAI GACNNNNGTC 2 cut(s) 74, 1469
Psp124BI GAGCTC 1 cut(s) 531
Psp5II RGGWCCY 1 cut(s) 244
Psp6I CCWGG 5 cut(s) 252, 423, 777, 813, 1442
PspGI CCWGG 5 cut(s) 252, 423, 777, 813, 1442
PspN4I GGNNCC 6 cut(s) 180, 245, 429, 717, 1719, 1750
PspPI GGNCC 8 cut(s) 69, 160, 244, 309, 427, 886, 1478, 1749
PspPPI RGGWCCY 1 cut(s) 244
PspXI VCTCGAGB 1 cut(s) 341
PstNI CAGNNNCTG 1 cut(s) 736
PsuI RGATCY 1 cut(s) 1507
PvuII CAGCTG 3 cut(s) 499, 1123, 1295
RruI TCGCGA 1 cut(s) 170
RsaI GTAC 4 cut(s) 41, 191, 800, 1826
RsaNI GTAC 4 cut(s) 40, 190, 799, 1825
RseI CAYNNNNRTG 2 cut(s) 698, 725
Rsr2I CGGWCCG 1 cut(s) 69
RsrII CGGWCCG 1 cut(s) 69
SacI GAGCTC 1 cut(s) 531
SacII CCGCGG 1 cut(s) 399
SalI GTCGAC 2 cut(s) 77, 575
SapI GCTCTTC 2 cut(s) 335, 950
SaqAI TTAA 1 cut(s) 1422
Sau3AI GATC 7 cut(s) 130, 300, 676, 840, 1363, 1380, 1507
Sau96I GGNCC 8 cut(s) 69, 160, 244, 309, 427, 886, 1478, 1749
SchI GAGTC 4 cut(s) 353, 597, 737, 1483
ScrFI CCNGG 7 cut(s) 254, 389, 425, 767, 779, 815, 1444
SduI GDGCHC 8 cut(s) 110, 531, 623, 695, 720, 962, 1650, 1765
SfaNI GCATC 2 cut(s) 622, 1143
SfoI GGCGCC 1 cut(s) 180
Sfr274I CTCGAG 2 cut(s) 341, 1458
Sfr303I CCGCGG 1 cut(s) 399
SfuI TTCGAA 1 cut(s) 1586
SgrBI CCGCGG 1 cut(s) 399
SgrDI CGTCGACG 2 cut(s) 77, 575
SinI GGWCC 5 cut(s) 69, 160, 244, 886, 1478
SlaI CTCGAG 2 cut(s) 341, 1458
SmiMI CAYNNNNRTG 2 cut(s) 698, 725
SmlI CTYRAG 3 cut(s) 341, 1372, 1458
SmoI CTYRAG 3 cut(s) 341, 1372, 1458
SnaBI TACGTA 1 cut(s) 1023
SspDI GGCGCC 1 cut(s) 178
SspMI CTAG 4 cut(s) 1161, 1484, 1511, 1725
SstI GAGCTC 1 cut(s) 531
StyD4I CCNGG 7 cut(s) 252, 387, 423, 765, 777, 813, 1442
StyI CCWWGG 2 cut(s) 1350, 1800
TaaI ACNGT 4 cut(s) 157, 484, 609, 1007
TaiI ACGT 4 cut(s) 176, 292, 1025, 1469
TauI GCSGC 8 cut(s) 521, 598, 647, 650, 850, 1142, 1145, 1292
TfiI GAWTC 6 cut(s) 21, 46, 202, 451, 931, 1298
Tru1I TTAA 1 cut(s) 1422
Tru9I TTAA 1 cut(s) 1422
TscAI CASTG 3 cut(s) 1174, 1765, 1837
TseFI GTSAC 5 cut(s) 853, 1001, 1486, 1499, 1838
TseI GCWGC 9 cut(s) 370, 499, 598, 859, 1292, 1322, 1346, 1529, 1654
Tsp45I GTSAC 5 cut(s) 853, 1001, 1486, 1499, 1838
TspDTI ATGAA 3 cut(s) 377, 463, 1640
TspGWI ACGGA 5 cut(s) 340, 423, 994, 1538, 1677
TspRI CASTG 3 cut(s) 1174, 1765, 1837
VneI GTGCAC 1 cut(s) 1761
VpaK11BI GGWCC 5 cut(s) 69, 160, 244, 886, 1478
XapI RAATTY 1 cut(s) 232
XbaI TCTAGA 1 cut(s) 1510
XcmI CCANNNNNNNNNTGG 2 cut(s) 487, 1357
XhoI CTCGAG 2 cut(s) 341, 1458
XmiI GTMKAC 2 cut(s) 78, 576
XmnI GAANNNNTTC 1 cut(s) 329
XspI CTAG 4 cut(s) 1161, 1484, 1511, 1725
ZraI GACGTC 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.