Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0001438

Physical Location & Seq

Genomic Coordinates Forward (+)

11061356 .. 11063927

Gene Structure 2572 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG131700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGGCCGCCGCCGCCGCCGAAAATGACGAAAAGACCCTCCAAGAGGAGCTGTGCCTCCCCATCCTCCTCGCGGATCGGGTGCTCAAGTCGGCCCACGAGGCCGAGTCGTCCAAGCTCGAGTGCGCCGACCTGGCCCACCAAGTCGACCGCCTCTCCCAGATGCTCCGATCCGCCGTCCGCATCGCCGCCGCCTCCCCCTCCCTCTACGAGCGCCCCGTCCGCCGCATCGCGGCCGACGTGGCCAAGAACCTGGACCGCGCGCTCACCCTGGTCCGCAAGTGCAAGCACAGCGGCGTCCTCCGGCAGGTCTTCTCCATCACCACCGCCGCCGACTTCCGCAAGGTGTCGAGCCTCCTCGAGTCGTCGATCGGCGACATGAAGTGGCTCCTGTCGGTGTTCGAGTCGGACGGCGCGAACCTCTCCCTGCCGCCCATCGCGAGCAACGACCCGATTCTGAGCTGGGTGTGGTCCTACATCGCGACCATTCAGATGGGTCAGCTCCGGGACCGAGTGGAGGCGGCGAGTTCGCTCGTCTCGCTGGCGAGGGACAACGACCGGAACAAGAAGATAATTGTTGACGAGGGAGGAGTGACGCCGCTGCTCAAGCTTCTGAAGGAGGGGTCTTCGGCGGAGGCACAGATTGCTGCGGCGAATGCTCTGTTTCATATCGCTACGGACCAGGAGAGGGTTCGGACTGTAATCGAGTTGAATGGGATTCCGATGATAGTTTCGGTTTTGGGGGATTCGCCGATGAGGGTTCAGGCGGCGGTGGTGAGATTGGTGGCGGAAATGGCGGAGCTTGACCCGATTGCGCAGGTGGACTTTGCCAGAGAAAATGTGACTAGGCCGTTGGTGTCTCTGTTGGCTATGGATACGGTTCTGGATGAGCCGAAACCGCAGCCGGGTAAGCCCAGCATTCATTCGCTTGTGATTAATAAGGAGTTGGTAGGAAAGGGGGCGAATTCGAGTAGTAGGTTGGGGTCCTTTAGTTCGAATCATTATCATTCTGATGGGAGTAGTAGAGGCGGGCATTATAGGAAAGATAGGGAGAGAGAGGTTGAGAGCCCTGAGGTCAAGCTCAACCTCAAGGTTGGTTGTGCTGAGGCATTGTGGAAGTTGTGTAGAGCTTGTTTGTTGAATAGTCGAAAAGTTACAGAGACTAAAGGGTTGATTTGTTTGGCCAAGATTGTTCACAAGGAGGTTGGGGAATTGCAGCTTAATTGCTTGATGACTGTGATGGAAATAGCTGCAGTGGCAGAGTCAAATCCAGAGCTTAGACGATCGGCTTTTAAGCCCAACTCTCCGGCTGCAAAGGCAGTTGTCGATCAGCTTATGAGGGTTATTCAAGAAGAGGGCAACCCGGATCTGCAAATACCGGCAATCAAGGCAATTGGGTCACTCGCAAGAACTTTTGCCGCCAGGGAAACCCGGATAGTTGGTCCTTTGGTTGCGCGGCTGGGTAATGTGAATGTGGATGTGGCAACTGAGGCTGCCATTGCATTGGGAAAGTTTGTGTGCTTGGAGAACTTCAACCGAGTAGAGCATTCCAAGACGATAATTGAGTTCAATGGGGTTCCTTCTCTGATGAGATTGTTGAAGGCTACTGATCGGACCAACGAACTTGCTCACTTGCACTGCCTAGAACTATTATGTTACCTCGCATTGCACGTAGGCAATAGCAAAGCTCTCGAACAAGCACAGGTGTTGAGTACTCTCGAGGGGGGAGCTCGTTCTGCTGTGGCACAAAATCCAGATTTGAAGGAGTTGTTTTCCAAAGCCATACACCATCTCAGTCTTTATCAGCCTGGAGCTCATCCCCACAGGCAAACTTTCATGCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008156 GO:0008285 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0019219 GO:0019222 GO:0031261 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0032993 GO:0034641 GO:0034645 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

613

Amino Acids

66.86

Weight (kDa)

7.96

Isoelectric Point (pI)

33.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7792	PF25055	14 - 133	7e-50	Domain of unknown function (DUF7792)
ARM_PUB	PF25598	167 - 447	5.4e-06	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001438)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26600 AT3G26600
fragaria_vesca	FvH4_4g25480 FvH4_5g06080
malus_domestica	MD06G1167100.v1.1 MD13G1102400.v1.1 MD14G1172700.v1.1 MD16G1102800.v1.1
prunus_persica	Prupe.1G089500_v2.0.a1 Prupe.1G243400_v2.0.a1 Prupe.5G166900_v2.0.a1
pyrus_communis	pycom06g14970 pycom06g14980 pycom13g08950 pycom14g14410 pycom16g08740
rosa_chinensis	RchiOBHm_Chr4g0423211 RchiOBHm_Chr4g0432811 RchiOBHm_Chr7g0192761 RchiOBHm_Chr7g0218041
rosa_laevigata	RLG00000004331 RLG00000006810
rosa_multiflora	Rmu_co8276235.1_g000001 Rmu_sc0001516.1_g000053 Rmu_sc0004101.1_g000049 Rmu_sc0005234.1_g000003 Rmu_sc0008148.1_g000037
rosa_roxburghii	Rroxscaffold_2G00090530 Rroxscaffold_3G00262710 Rroxscaffold_5G00374250 Rroxscaffold_7G00212840
rosa_rugosa	Rorug04G0263100 Rorug07G0004500
rosa_samantha	Rh1AG125500 Rh2AG461900 Rh2CG448900 Rh4AG317200 Rh4AG322300 Rh4BG325400 Rh4CG340300 Rh4DG320600 Rh4DG326400 Rh5BG349900 Rh5CG383400 Rh7AG129500 Rh7AG315400 Rh7BG130800 Rh7CG061100 Rh7CG134200 Rh7DG131700
rosa_wichuraiana	Rw4G027590 Rw7G011080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	805
Acc16I	TGCGCA	1 cut(s)	813
Acc36I	ACCTGC	2 cut(s)	295, 805
AccI	GTMKAC	1 cut(s)	144
AccII	CGCG	8 cut(s)	71, 230, 258, 260, 413, 437, 479, 1453
AclWI	GGATC	3 cut(s)	81, 162, 1371
AcoI	YGGCCR	4 cut(s)	3, 231, 240, 1179
AcsI	RAATTY	1 cut(s)	961
AcuI	CTGAAG	1 cut(s)	632
AcyI	GRCGYC	2 cut(s)	294, 593
AfaI	GTAC	1 cut(s)	1711
AfiI	CCNNNNNNNGG	7 cut(s)	43, 70, 229, 304, 514, 685, 902
AgsI	TTSAA	7 cut(s)	709, 1138, 1346, 1531, 1567, 1597, 1759
AjiI	CACGTC	1 cut(s)	238
AjnI	CCWGG	6 cut(s)	129, 249, 267, 678, 1418, 1804
Alw21I	GWGCWC	3 cut(s)	84, 1729, 1813
Alw26I	GTCTC	3 cut(s)	538, 861, 1151
AlwI	GGATC	3 cut(s)	81, 162, 1371
Ama87I	CYCGRG	3 cut(s)	116, 356, 1715
AoxI	GGCC	8 cut(s)	3, 90, 99, 132, 231, 240, 845, 1179
ApeKI	GCWGC	7 cut(s)	598, 644, 898, 1213, 1247, 1307, 1490
ApoI	RAATTY	1 cut(s)	961
AseI	ATTAAT	1 cut(s)	933
AspLEI	GCGC	7 cut(s)	125, 213, 260, 262, 413, 814, 1453
AsuC2I	CCSGG	4 cut(s)	503, 903, 1361, 1429
AsuHPI	GGTGA	3 cut(s)	256, 310, 784
AsuII	TTCGAA	1 cut(s)	992
AvaI	CYCGRG	3 cut(s)	116, 356, 1715
AvaII	GGWCC	8 cut(s)	253, 271, 468, 505, 676, 981, 1439, 1611
AxyI	CCTNAGG	1 cut(s)	1068
BalI	TGGCCA	2 cut(s)	242, 1181
BanII	GRGCYC	3 cut(s)	1067, 1729, 1813
BauI	CACGAG	1 cut(s)	95
BbsI	GAAGAC	2 cut(s)	301, 615
Bbv12I	GWGCWC	3 cut(s)	84, 1729, 1813
BbvCI	CCTCAGC	1 cut(s)	1101
BbvI	GCAGC	7 cut(s)	585, 631, 910, 1225, 1234, 1294, 1477
BccI	CCATC	7 cut(s)	68, 323, 440, 484, 1004, 1231, 1794
BceAI	ACGGC	3 cut(s)	158, 424, 832
BcgI	CGANNNNNNTGC	2 cut(s)	1669, 1703
BciT130I	CCWGG	6 cut(s)	131, 251, 269, 680, 1420, 1806
BciVI	GTATCC	1 cut(s)	865
BcnI	CCSGG	4 cut(s)	503, 903, 1361, 1429
BcoDI	GTCTC	3 cut(s)	538, 861, 1151
BfaI	CTAG	2 cut(s)	843, 1640
BfmI	CTRYAG	1 cut(s)	1248
BfoI	RGCGCY	1 cut(s)	214
BfuAI	ACCTGC	2 cut(s)	295, 805
BfuI	GTATCC	1 cut(s)	865
BglI	GCCNNNNNGGC	3 cut(s)	98, 131, 239
BmcAI	AGTACT	1 cut(s)	1711
Bme18I	GGWCC	8 cut(s)	253, 271, 468, 505, 676, 981, 1439, 1611
BmeT110I	CYCGRG	3 cut(s)	116, 356, 1715
BmgBI	CACGTC	1 cut(s)	238
BmiI	GGNNCC	4 cut(s)	386, 506, 982, 1575
BmsI	GCATC	3 cut(s)	150, 189, 234
BpiI	GAAGAC	2 cut(s)	301, 615
BpmI	CTGGAG	1 cut(s)	1827
Bpu10I	CCTNAGC	1 cut(s)	1101
Bpu14I	TTCGAA	1 cut(s)	992
BpuEI	CTTGAG	3 cut(s)	68, 587, 1070
BpuMI	CCSGG	4 cut(s)	503, 903, 1361, 1429
BsaAI	YACGTR	1 cut(s)	1669
BsaHI	GRCGYC	2 cut(s)	294, 593
BsaJI	CCNNGG	2 cut(s)	267, 1419
BsaWI	WCCGGW	1 cut(s)	555
BsaXI	ACNNNNNCTCC	2 cut(s)	137, 167
Bsc4I	CCNNNNNNNGG	7 cut(s)	43, 70, 229, 304, 514, 685, 902
Bse118I	RCCGGY	1 cut(s)	1375
Bse21I	CCTNAGG	1 cut(s)	1068
Bse3DI	GCAATG	2 cut(s)	1494, 1661
BseBI	CCWGG	6 cut(s)	131, 251, 269, 680, 1420, 1806
BseDI	CCNNGG	2 cut(s)	267, 1419
BseGI	GGATG	4 cut(s)	60, 889, 1480, 1813
BseLI	CCNNNNNNNGG	7 cut(s)	43, 70, 229, 304, 514, 685, 902
BseMI	GCAATG	2 cut(s)	1494, 1661
BseMII	CTCAG	5 cut(s)	446, 1059, 1092, 1476, 1804
BsePI	GCGCGC	1 cut(s)	258
BseRI	GAGGAG	4 cut(s)	56, 59, 344, 600
BseX3I	CGGCCG	1 cut(s)	231
BseXI	GCAGC	7 cut(s)	585, 631, 910, 1225, 1234, 1294, 1477
BseYI	CCCAGC	3 cut(s)	459, 911, 1456
Bsh1236I	CGCG	8 cut(s)	71, 230, 258, 260, 413, 437, 479, 1453
Bsh1285I	CGRYCG	5 cut(s)	148, 234, 369, 556, 1283
BshFI	GGCC	8 cut(s)	5, 92, 101, 134, 233, 242, 847, 1181
BsiEI	CGRYCG	5 cut(s)	148, 234, 369, 556, 1283
BsiHKAI	GWGCWC	3 cut(s)	84, 1729, 1813
BsiHKCI	CYCGRG	3 cut(s)	116, 356, 1715
BsiSI	CCGG	8 cut(s)	301, 502, 556, 902, 1304, 1361, 1376, 1429
BslFI	GGGAC	2 cut(s)	518, 560
BslI	CCNNNNNNNGG	7 cut(s)	43, 70, 229, 304, 514, 685, 902
BsmAI	GTCTC	3 cut(s)	538, 861, 1151
BsmBI	CGTCTC	1 cut(s)	538
BsmFI	GGGAC	2 cut(s)	518, 560
BsmI	GAATGC	3 cut(s)	658, 915, 1543
BsnI	GGCC	8 cut(s)	5, 92, 101, 134, 233, 242, 847, 1181
BsoBI	CYCGRG	3 cut(s)	116, 356, 1715
Bsp119I	TTCGAA	1 cut(s)	992
Bsp1286I	GDGCHC	4 cut(s)	84, 1067, 1729, 1813
Bsp143I	GATC	7 cut(s)	73, 167, 366, 1280, 1324, 1363, 1606
Bsp68I	TCGCGA	2 cut(s)	437, 479
BspANI	GGCC	8 cut(s)	5, 92, 101, 134, 233, 242, 847, 1181
BspCNI	CTCAG	5 cut(s)	447, 1060, 1093, 1477, 1803
BspFNI	CGCG	8 cut(s)	71, 230, 258, 260, 413, 437, 479, 1453
BspLI	GGNNCC	4 cut(s)	386, 506, 982, 1575
BspMAI	CTGCAG	1 cut(s)	1252
BspMI	ACCTGC	2 cut(s)	295, 805
BspPI	GGATC	3 cut(s)	81, 162, 1371
BspT104I	TTCGAA	1 cut(s)	992
BsrDI	GCAATG	2 cut(s)	1494, 1661
BsrFI	RCCGGY	1 cut(s)	1375
BssAI	RCCGGY	1 cut(s)	1375
BssECI	CCNNGG	2 cut(s)	267, 1419
BssHII	GCGCGC	1 cut(s)	258
BssMI	GATC	7 cut(s)	73, 167, 366, 1280, 1324, 1363, 1606
BssNI	GRCGYC	2 cut(s)	294, 593
BssSI	CACGAG	1 cut(s)	95
Bst2BI	CACGAG	1 cut(s)	95
Bst2UI	CCWGG	6 cut(s)	131, 251, 269, 680, 1420, 1806
Bst4CI	ACNGT	3 cut(s)	697, 877, 1234
Bst6I	CTCTTC	1 cut(s)	1344
BstACI	GRCGYC	2 cut(s)	294, 593
BstAPI	GCANNNNNTGC	1 cut(s)	641
BstBAI	YACGTR	1 cut(s)	1669
BstBI	TTCGAA	1 cut(s)	992
BstC8I	GCNNGC	5 cut(s)	260, 284, 439, 540, 1028
BstDEI	CTNAG	6 cut(s)	455, 1068, 1101, 1274, 1485, 1790
BstENI	CCTNNNNNAGG	2 cut(s)	41, 302
BstF5I	GGATG	4 cut(s)	60, 889, 1480, 1813
BstFNI	CGCG	8 cut(s)	71, 230, 258, 260, 413, 437, 479, 1453
BstH2I	RGCGCY	1 cut(s)	214
BstHHI	GCGC	7 cut(s)	125, 213, 260, 262, 413, 814, 1453
BstKTI	GATC	7 cut(s)	76, 170, 369, 1283, 1327, 1366, 1609
BstMAI	GTCTC	3 cut(s)	538, 861, 1151
BstMBI	GATC	7 cut(s)	73, 167, 366, 1280, 1324, 1363, 1606
BstMCI	CGRYCG	5 cut(s)	148, 234, 369, 556, 1283
BstNI	CCWGG	6 cut(s)	131, 251, 269, 680, 1420, 1806
BstSFI	CTRYAG	1 cut(s)	1248
BstUI	CGCG	8 cut(s)	71, 230, 258, 260, 413, 437, 479, 1453
BstV1I	GCAGC	7 cut(s)	585, 631, 910, 1225, 1234, 1294, 1477
BstV2I	GAAGAC	2 cut(s)	301, 615
BstX2I	RGATCY	1 cut(s)	1363
BstXI	CCANNNNNNTGG	3 cut(s)	250, 490, 1501
BstYI	RGATCY	1 cut(s)	1363
BstZI	CGGCCG	1 cut(s)	231
Bsu36I	CCTNAGG	1 cut(s)	1068
BsuI	GTATCC	1 cut(s)	865
BsuRI	GGCC	8 cut(s)	5, 92, 101, 134, 233, 242, 847, 1181
BtgZI	GCGATG	4 cut(s)	166, 211, 418, 460
BtrI	CACGTC	1 cut(s)	238
BtsCI	GGATG	4 cut(s)	60, 889, 1480, 1813
BtsI	GCAGTG	2 cut(s)	1257, 1633
BtsIMutI	CAGTG	2 cut(s)	1257, 1633
BtuMI	TCGCGA	2 cut(s)	437, 479
BveI	ACCTGC	2 cut(s)	295, 805
Cac8I	GCNNGC	5 cut(s)	260, 284, 439, 540, 1028
CfoI	GCGC	7 cut(s)	125, 213, 260, 262, 413, 814, 1453
Cfr10I	RCCGGY	1 cut(s)	1375
CseI	GACGC	2 cut(s)	283, 601
Csp6I	GTAC	1 cut(s)	1710
CviAII	CATG	2 cut(s)	376, 1834
CviQI	GTAC	1 cut(s)	1710
DdeI	CTNAG	6 cut(s)	455, 1068, 1101, 1274, 1485, 1790
DpnI	GATC	7 cut(s)	75, 169, 368, 1282, 1326, 1365, 1608
DpnII	GATC	7 cut(s)	73, 167, 366, 1280, 1324, 1363, 1606
EaeI	YGGCCR	4 cut(s)	3, 231, 240, 1179
EagI	CGGCCG	1 cut(s)	231
Eam1104I	CTCTTC	1 cut(s)	1344
EarI	CTCTTC	1 cut(s)	1344
EciI	GGCGGA	5 cut(s)	160, 209, 644, 800, 809
Ecl136II	GAGCTC	2 cut(s)	1727, 1811
EclXI	CGGCCG	1 cut(s)	231
Eco24I	GRGCYC	3 cut(s)	1067, 1729, 1813
Eco47I	GGWCC	8 cut(s)	253, 271, 468, 505, 676, 981, 1439, 1611
Eco52I	CGGCCG	1 cut(s)	231
Eco53kI	GAGCTC	2 cut(s)	1727, 1811
Eco57I	CTGAAG	1 cut(s)	632
Eco81I	CCTNAGG	1 cut(s)	1068
Eco88I	CYCGRG	3 cut(s)	116, 356, 1715
EcoICRI	GAGCTC	2 cut(s)	1727, 1811
EcoNI	CCTNNNNNAGG	2 cut(s)	41, 302
EcoO109I	RGGNCCY	1 cut(s)	981
EcoRI	GAATTC	1 cut(s)	961
EcoRII	CCWGG	6 cut(s)	129, 249, 267, 678, 1418, 1804
EcoT38I	GRGCYC	3 cut(s)	1067, 1729, 1813
Esp3I	CGTCTC	1 cut(s)	538
FaeI	CATG	2 cut(s)	379, 1837
FaiI	YATR	9 cut(s)	377, 666, 869, 1035, 1334, 1651, 1781, 1835, 1840
FaqI	GGGAC	2 cut(s)	518, 560
FatI	CATG	2 cut(s)	375, 1833
FauI	CCCGC	1 cut(s)	1019
FblI	GTMKAC	1 cut(s)	144
FokI	GGATG	4 cut(s)	47, 896, 1487, 1800
FriOI	GRGCYC	3 cut(s)	1067, 1729, 1813
FspBI	CTAG	2 cut(s)	843, 1640
FspI	TGCGCA	1 cut(s)	813
GlaI	GCGC	7 cut(s)	124, 212, 259, 261, 412, 813, 1452
GsaI	CCCAGC	3 cut(s)	463, 915, 1460
GsuI	CTGGAG	1 cut(s)	1827
HaeII	RGCGCY	1 cut(s)	214
HaeIII	GGCC	8 cut(s)	5, 92, 101, 134, 233, 242, 847, 1181
HapII	CCGG	8 cut(s)	301, 502, 556, 902, 1304, 1361, 1376, 1429
HgaI	GACGC	2 cut(s)	283, 601
HhaI	GCGC	7 cut(s)	125, 213, 260, 262, 413, 814, 1453
Hin1I	GRCGYC	2 cut(s)	294, 593
Hin1II	CATG	2 cut(s)	379, 1837
Hin6I	GCGC	7 cut(s)	123, 211, 258, 260, 411, 812, 1451
HinP1I	GCGC	7 cut(s)	123, 211, 258, 260, 411, 812, 1451
HincII	GTYRAC	2 cut(s)	145, 577
HindII	GTYRAC	2 cut(s)	145, 577
HindIII	AAGCTT	1 cut(s)	605
HinfI	GANTC	8 cut(s)	104, 359, 401, 451, 715, 743, 994, 1259
HpaII	CCGG	8 cut(s)	301, 502, 556, 902, 1304, 1361, 1376, 1429
HphI	GGTGA	3 cut(s)	256, 310, 784
Hpy166II	GTNNAC	4 cut(s)	145, 577, 820, 1192
Hpy188III	TCNNGA	8 cut(s)	436, 478, 881, 1268, 1346, 1688, 1715, 1751
Hpy8I	GTNNAC	4 cut(s)	145, 577, 820, 1192
Hpy99I	CGWCG	2 cut(s)	239, 367
HpyAV	CCTTC	4 cut(s)	607, 1587, 1591, 1753
HpyCH4III	ACNGT	3 cut(s)	697, 877, 1234
HpyCH4IV	ACGT	2 cut(s)	237, 1668
HpyCH4V	TGCA	8 cut(s)	282, 1213, 1250, 1310, 1369, 1499, 1633, 1666
HpyF3I	CTNAG	6 cut(s)	455, 1068, 1101, 1274, 1485, 1790
HpySE526I	ACGT	2 cut(s)	237, 1668
Hsp92I	GRCGYC	2 cut(s)	294, 593
Hsp92II	CATG	2 cut(s)	379, 1837
HspAI	GCGC	7 cut(s)	123, 211, 258, 260, 411, 812, 1451
Kzo9I	GATC	7 cut(s)	73, 167, 366, 1280, 1324, 1363, 1606
LmnI	GCTCC	7 cut(s)	46, 168, 390, 504, 796, 1724, 1808
Lsp1109I	GCAGC	7 cut(s)	585, 631, 910, 1225, 1234, 1294, 1477
LweI	GCATC	3 cut(s)	150, 189, 234
MaeI	CTAG	2 cut(s)	843, 1640
MaeII	ACGT	2 cut(s)	237, 1668
MaeIII	GTNAC	5 cut(s)	589, 838, 1150, 1395, 1652
MalI	GATC	7 cut(s)	75, 169, 368, 1282, 1326, 1365, 1608
MboI	GATC	7 cut(s)	73, 167, 366, 1280, 1324, 1363, 1606
MboII	GAAGA	4 cut(s)	301, 577, 615, 1361
MfeI	CAATTG	1 cut(s)	1389
MflI	RGATCY	1 cut(s)	1363
MhlI	GDGCHC	4 cut(s)	84, 1067, 1729, 1813
MlsI	TGGCCA	2 cut(s)	242, 1181
MluCI	AATT	6 cut(s)	570, 961, 1208, 1219, 1389, 1557
MluNI	TGGCCA	2 cut(s)	242, 1181
MlyI	GAGTC	4 cut(s)	113, 368, 410, 1268
MmeI	TCCRAC	1 cut(s)	384
Mox20I	TGGCCA	2 cut(s)	242, 1181
MscI	TGGCCA	2 cut(s)	242, 1181
MseI	TTAA	3 cut(s)	933, 1218, 1290
MslI	CAYNNNNRTG	2 cut(s)	488, 1008
Msp20I	TGGCCA	2 cut(s)	242, 1181
MspA1I	CMGCKG	2 cut(s)	291, 598
MspI	CCGG	8 cut(s)	301, 502, 556, 902, 1304, 1361, 1376, 1429
MunI	CAATTG	1 cut(s)	1389
Mva1269I	GAATGC	3 cut(s)	658, 915, 1543
MvaI	CCWGG	6 cut(s)	131, 251, 269, 680, 1420, 1806
MvnI	CGCG	8 cut(s)	71, 230, 258, 260, 413, 437, 479, 1453
NciI	CCSGG	4 cut(s)	503, 903, 1361, 1429
NdeII	GATC	7 cut(s)	73, 167, 366, 1280, 1324, 1363, 1606
NlaIII	CATG	2 cut(s)	379, 1837
NlaIV	GGNNCC	4 cut(s)	386, 506, 982, 1575
NmeAIII	GCCGAG	1 cut(s)	127
NmuCI	GTSAC	3 cut(s)	589, 838, 1395
NruI	TCGCGA	2 cut(s)	437, 479
NsbI	TGCGCA	1 cut(s)	813
NspV	TTCGAA	1 cut(s)	992
PaeR7I	CTCGAG	3 cut(s)	116, 356, 1715
PaqCI	CACCTGC	1 cut(s)	805
PauI	GCGCGC	1 cut(s)	258
PcsI	WCGNNNNNNNCGW	6 cut(s)	123, 213, 234, 410, 441, 1665
PctI	GAATGC	3 cut(s)	658, 915, 1543
PfeI	GAWTC	4 cut(s)	451, 715, 743, 994
PfoI	TCCNGGA	1 cut(s)	501
Ple19I	CGATCG	2 cut(s)	369, 1283
PleI	GAGTC	4 cut(s)	112, 367, 409, 1267
PpsI	GAGTC	4 cut(s)	112, 367, 409, 1267
Ppu21I	YACGTR	1 cut(s)	1669
PpuMI	RGGWCCY	1 cut(s)	981
PshBI	ATTAAT	1 cut(s)	933
Psp124BI	GAGCTC	2 cut(s)	1729, 1813
Psp5II	RGGWCCY	1 cut(s)	981
Psp6I	CCWGG	6 cut(s)	129, 249, 267, 678, 1418, 1804
PspFI	CCCAGC	3 cut(s)	459, 911, 1456
PspGI	CCWGG	6 cut(s)	129, 249, 267, 678, 1418, 1804
PspN4I	GGNNCC	4 cut(s)	386, 506, 982, 1575
PspPPI	RGGWCCY	1 cut(s)	981
PspXI	VCTCGAGB	2 cut(s)	116, 356
PstI	CTGCAG	1 cut(s)	1252
PsuI	RGATCY	1 cut(s)	1363
PteI	GCGCGC	1 cut(s)	258
PvuI	CGATCG	2 cut(s)	369, 1283
RruI	TCGCGA	2 cut(s)	437, 479
RsaI	GTAC	1 cut(s)	1711
RsaNI	GTAC	1 cut(s)	1710
RseI	CAYNNNNRTG	2 cut(s)	488, 1008
SacI	GAGCTC	2 cut(s)	1729, 1813
SalI	GTCGAC	1 cut(s)	143
SaqAI	TTAA	3 cut(s)	933, 1218, 1290
Sau3AI	GATC	7 cut(s)	73, 167, 366, 1280, 1324, 1363, 1606
ScaI	AGTACT	1 cut(s)	1711
SchI	GAGTC	4 cut(s)	113, 368, 410, 1268
SduI	GDGCHC	4 cut(s)	84, 1067, 1729, 1813
SfaNI	GCATC	3 cut(s)	150, 189, 234
SfcI	CTRYAG	1 cut(s)	1248
SfiI	GGCCNNNNNGGCC	2 cut(s)	98, 239
Sfr274I	CTCGAG	3 cut(s)	116, 356, 1715
SfuI	TTCGAA	1 cut(s)	992
SinI	GGWCC	8 cut(s)	253, 271, 468, 505, 676, 981, 1439, 1611
SlaI	CTCGAG	3 cut(s)	116, 356, 1715
SmiMI	CAYNNNNRTG	2 cut(s)	488, 1008
SmlI	CTYRAG	6 cut(s)	83, 116, 356, 602, 1085, 1715
SmoI	CTYRAG	6 cut(s)	83, 116, 356, 602, 1085, 1715
Sse9I	AATT	6 cut(s)	570, 961, 1208, 1219, 1389, 1557
SspMI	CTAG	2 cut(s)	843, 1640
SstI	GAGCTC	2 cut(s)	1729, 1813
TaaI	ACNGT	3 cut(s)	697, 877, 1234
TaiI	ACGT	2 cut(s)	240, 1671
TaqII	GACCGA	1 cut(s)	522
TasI	AATT	6 cut(s)	570, 961, 1208, 1219, 1389, 1557
TatI	WGTACW	1 cut(s)	1709
TfiI	GAWTC	4 cut(s)	451, 715, 743, 994
Tru1I	TTAA	3 cut(s)	933, 1218, 1290
Tru9I	TTAA	3 cut(s)	933, 1218, 1290
TscAI	CASTG	2 cut(s)	1257, 1640
TseFI	GTSAC	3 cut(s)	589, 838, 1395
TseI	GCWGC	7 cut(s)	598, 644, 898, 1213, 1247, 1307, 1490
Tsp45I	GTSAC	3 cut(s)	589, 838, 1395
TspDTI	ATGAA	4 cut(s)	392, 653, 908, 1822
TspGWI	ACGGA	1 cut(s)	689
TspRI	CASTG	2 cut(s)	1257, 1640
VpaK11BI	GGWCC	8 cut(s)	253, 271, 468, 505, 676, 981, 1439, 1611
VspI	ATTAAT	1 cut(s)	933
XagI	CCTNNNNNAGG	2 cut(s)	41, 302
XapI	RAATTY	1 cut(s)	961
XhoI	CTCGAG	3 cut(s)	116, 356, 1715
XmiI	GTMKAC	1 cut(s)	144
XspI	CTAG	2 cut(s)	843, 1640
ZrmI	AGTACT	1 cut(s)	1711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.